Update app.py

app.py

@@ -23,7 +23,7 @@ def atac_bwtonpz(atac_file):
 
         seq_length = length // 1000 * 1000
         signals[chr] = csr_matrix(temp.astype('float32')[:seq_length])
-    with open('ATAC/atac_'+atac_file.replace('bigWig','pickle'),'wb') as f:
+    with open(atac_file.replace('bigWig','pickle'),'wb') as f:
         pickle.dump(signals,f)
 
 
@@ -46,6 +46,7 @@ def process(bam_file,progress=gr.Progress()):
     else:
         progress(0.2, desc="Downloading BAM file "+bam_file)
         gdown.download(url=bam_file,fuzzy=True, output='ATAC/'+fid + '.bam')
+   
     progress(0.4, desc="Index BAM file")
     time.sleep(0.1)
     pysam.index('ATAC/'+fid + '.bam')
@@ -60,10 +61,10 @@ def process(bam_file,progress=gr.Progress()):
     os.remove('ATAC/'+fid+'.bam.bai')
     os.remove('ATAC/'+fid + '.bigWig')
     os.remove('ATAC/'+fid + '.bam')
-    return 'ATAC/atac_' + fid + '.pickle'
-
+    return 'ATAC/'+fid + '.pickle'
 
 css="li {font-size: 16px; --font: 'Quicksand', 'ui-sans-serif', 'system-ui', sans-serif"
+# theme=gr.themes.Monochrome(),css=css
 with gr.Blocks(css=css) as app:
     gr.HTML('<p>For faster inference without waiting in queue, you may duplicate the space. <a href="https://huggingface.co/spaces/drjieliu/epcot_app?duplicate=true">'
                  '<img style="display: inline; margin-top: 0em; margin-bottom: 0em" src="https://bit.ly/3gLdBN6" alt="Duplicate Space" /></a></p>')
@@ -79,6 +80,4 @@ with gr.Blocks(css=css) as app:
             out = gr.File(label='Download the processed file')
         btn2.click(fn=process, inputs=inp, outputs=out)
 
-
-
-app.queue(concurrency_count=1,max_size=10).launch(enable_queue=True, debug=True)
+app.queue(concurrency_count=1,max_size=5).launch(enable_queue=True, debug=True)