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Browse files- nbs/01_clinical_tutor.ipynb +575 -588
- nbs/02_learning_interface.ipynb +90 -28
- wardbuddy/clinical_tutor.py +16 -28
- wardbuddy/learning_interface.py +90 -28
nbs/01_clinical_tutor.ipynb
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"cells": [
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"id": "d9a32ad5-9f07-47f2-97ae-15b0646e355b",
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"metadata": {},
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"outputs": [],
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"source": [
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"#| default_exp clinical_tutor"
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]
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"cell_type": "markdown",
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"id": "0db4b759-310c-4e38-9fdc-2efb94b541dd",
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"metadata": {},
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"source": [
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"# Clinical Tutor\n",
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"\n",
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"> Core module for using learning context for context-appropriate tutor responses\n"
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]
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"cell_type": "markdown",
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"id": "16f93992-88dd-409b-8370-b86302e1ce6a",
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"metadata": {},
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"source": [
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"## Setup"
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"cell_type": "code",
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"id": "6d2403bb-70a1-4744-be0b-d259234c1b62",
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"metadata": {},
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"outputs": [],
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"source": [
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"#| hide\n",
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"from nbdev.showdoc import *"
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"cell_type": "code",
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"execution_count": null,
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"id": "477ba22b-55c1-467e-8206-a92f88a598fd",
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"metadata": {},
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"outputs": [
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"name": "stderr",
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"output_type": "stream",
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"text": [
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"C:\\Users\\deepa\\AppData\\Local\\Programs\\Python\\Python312\\Lib\\site-packages\\tqdm\\auto.py:21: TqdmWarning: IProgress not found. Please update jupyter and ipywidgets. See https://ipywidgets.readthedocs.io/en/stable/user_install.html\n",
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" from .autonotebook import tqdm as notebook_tqdm\n"
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],
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"source": [
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"#| export\n",
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"from typing import Dict, List, Optional, Any, Tuple\n",
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"import os\n",
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"import json\n",
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"import logging\n",
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"from pathlib import Path\n",
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"from datetime import datetime\n",
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"from dotenv import load_dotenv\n",
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"import aiohttp\n",
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"import re\n",
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"from collections import defaultdict\n",
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"from wardbuddy.learning_context import LearningContext, setup_logger\n",
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"\n",
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"# Load environment variables\n",
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"load_dotenv()\n",
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"\n",
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"logger = setup_logger(__name__)"
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"## Adaptive Clinical Tutor"
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]
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},
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"cell_type": "markdown",
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"metadata": {},
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"source": [
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"This module implements:\n",
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"\n",
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" - Engages in natural case discussions like a clinical supervisor\n",
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" - Provides context-aware feedback based on student's rotation and preferences\n",
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" - Analyzes discussions to track learning progress\n",
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" - Integrates with the student's learning context\n",
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"\n",
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"The tutor aims to mimic real-world clinical teaching interactions where students present cases and receive feedback in a natural conversational style.\n"
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"cell_type": "code",
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"id": "da7d2115-b30f-40ba-9566-bcbaf155026d",
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"metadata": {},
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"source": [
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"#| export \n",
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"class OpenRouterException(Exception):\n",
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" \"\"\"Custom exception for OpenRouter API errors\"\"\"\n",
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" pass"
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"id": "75c2cbfc-75e7-45ee-9d86-b931f81a3ad5",
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"metadata": {},
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"outputs": [],
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"source": [
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"#| export\n",
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"class ClinicalTutor:\n",
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" \"\"\"\n",
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" Adaptive clinical teaching module that provides context-aware feedback.\n",
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" \n",
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" The tutor acts as an experienced clinical supervisor, engaging in natural\n",
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" case discussions while tracking student progress and adapting feedback\n",
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" based on learning context.\n",
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" \n",
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" Attributes:\n",
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" learning_context (LearningContext): Student's learning context\n",
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" model (str): LLM model identifier\n",
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" api_url (str): OpenRouter API endpoint\n",
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" \"\"\"\n",
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" \n",
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" def __init__(\n",
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" self,\n",
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" context_path: Optional[Path] = None,\n",
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" model: str = \"anthropic/claude-3.5-sonnet\"\n",
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" ):\n",
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" \"\"\"\n",
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" Initialize clinical tutor.\n",
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" \n",
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" Args:\n",
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" context_path: Optional path for context persistence\n",
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" model: Model identifier for OpenRouter\n",
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" \"\"\"\n",
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" self.api_key: str = os.getenv(\"OPENROUTER_API_KEY\")\n",
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" if not self.api_key:\n",
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" raise ValueError(\"OpenRouter API key not found\")\n",
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" \n",
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" self.api_url: str = \"https://openrouter.ai/api/v1/chat/completions\"\n",
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" self.model: str = model\n",
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" \n",
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" self.learning_context = LearningContext(context_path)\n",
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" self.context_path = context_path\n",
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" \n",
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" # Track conversation state\n",
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" self.current_case: Dict = {\n",
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" \"started\": None,\n",
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" \"chief_complaint\": None,\n",
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" \"key_findings\": [],\n",
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" \"assessment\": None,\n",
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" \"plan\": None\n",
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" }\n",
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" \n",
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" logger.info(f\"Clinical tutor initialized with model: {model}\")\n",
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" \n",
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" async def _get_completion(\n",
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" self,\n",
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" messages: List[Dict],\n",
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" temperature: float = 0.7,\n",
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" max_retries: int = 3\n",
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" ) -> str:\n",
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" \"\"\"\n",
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" Get completion from OpenRouter API with retry logic.\n",
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" \n",
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" Args:\n",
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" messages: List of conversation messages\n",
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" temperature: Temperature for response generation\n",
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" max_retries: Maximum retry attempts\n",
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" \n",
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" Returns:\n",
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" str: Model response\n",
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" \n",
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" Raises:\n",
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" OpenRouterException: If API calls fail after retries\n",
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" \"\"\"\n",
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" headers = {\n",
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" \"Authorization\": f\"Bearer {self.api_key}\",\n",
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" \"Content-Type\": \"application/json\",\n",
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" \"HTTP-Referer\": \"http://localhost:7860\"\n",
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" }\n",
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" \n",
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" data = {\n",
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" \"model\": self.model,\n",
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" \"messages\": messages,\n",
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" \"temperature\": temperature,\n",
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" \"max_tokens\": 2000\n",
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" }\n",
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" \n",
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" for attempt in range(max_retries):\n",
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" try:\n",
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" async with aiohttp.ClientSession() as session:\n",
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" async with session.post(\n",
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" self.api_url,\n",
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" headers=headers,\n",
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" json=data,\n",
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" timeout=30\n",
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" ) as response:\n",
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" response.raise_for_status()\n",
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" result = await response.json()\n",
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" return result[\"choices\"][0][\"message\"][\"content\"]\n",
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" \n",
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" except Exception as e:\n",
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" if attempt == max_retries - 1:\n",
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" raise OpenRouterException(f\"API call failed: {str(e)}\")\n",
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" logger.warning(f\"Retry {attempt + 1} after error: {str(e)}\")\n",
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" # Could add exponential backoff here if needed\n",
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" \n",
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" def _build_discussion_prompt(self) -> str:\n",
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" \"\"\"Build context-aware prompt for case discussion.\"\"\"\n",
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" rotation = self.learning_context.current_rotation\n",
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" active_preferences = [\n",
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" p[\"focus\"] for p in self.learning_context.feedback_preferences \n",
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" if p[\"active\"]\n",
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" ]\n",
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" \n",
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" significant_gaps = {\n",
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" topic: score for topic, score \n",
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" in self.learning_context.knowledge_profile[\"gaps\"].items()\n",
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" if score < 0.7 # Only include significant gaps\n",
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" }\n",
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" \n",
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" prompt = f\"\"\"You are an experienced clinical supervisor in {rotation['specialty']}. Act as an engaging and conversational tutor who coaches towards deeper understanding through Socratic dialogue and targeted questions.\n",
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"\n",
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" Key Principles:\n",
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" 1. Assume I have strong foundational knowledge in medicine, clinical reasoning, and pre-medical sciences\n",
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" 2. Focus on high-level connections and nuanced clinical decision-making\n",
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" 3. Use targeted questions to explore my thought process and highlight key learning points\n",
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" 4. Share relevant clinical pearls and real-world applications\n",
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" 5. Be conversational and engaging, avoiding lecture-style responses\n",
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" \n",
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" Current Rotation Focus Areas:\n",
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" {', '.join(rotation['key_focus_areas'])}\n",
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"\n",
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" Areas for Deep Dive:\n",
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" {', '.join(f'{topic} (confidence: {score:.1f})' for topic, score in significant_gaps.items()) if significant_gaps else 'General clinical reasoning'}\n",
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"\n",
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" Student's Interests:\n",
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" {', '.join(active_preferences) if active_preferences else 'Broad clinical discussion'}\n",
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"\u001b[1;
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"\u001b[1;
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"version": 3
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"file_extension": ".py",
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"mimetype": "text/x-python",
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"name": "python",
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"nbconvert_exporter": "python",
|
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-
"pygments_lexer": "ipython3",
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-
"version": "3.12.7"
|
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}
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},
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"nbformat": 4,
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"nbformat_minor": 5
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| 588 |
-
}
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"cells": [
|
| 3 |
+
{
|
| 4 |
+
"cell_type": "code",
|
| 5 |
+
"execution_count": null,
|
| 6 |
+
"id": "d9a32ad5-9f07-47f2-97ae-15b0646e355b",
|
| 7 |
+
"metadata": {},
|
| 8 |
+
"outputs": [],
|
| 9 |
+
"source": [
|
| 10 |
+
"#| default_exp clinical_tutor"
|
| 11 |
+
]
|
| 12 |
+
},
|
| 13 |
+
{
|
| 14 |
+
"cell_type": "markdown",
|
| 15 |
+
"id": "0db4b759-310c-4e38-9fdc-2efb94b541dd",
|
| 16 |
+
"metadata": {},
|
| 17 |
+
"source": [
|
| 18 |
+
"# Clinical Tutor\n",
|
| 19 |
+
"\n",
|
| 20 |
+
"> Core module for using learning context for context-appropriate tutor responses\n"
|
| 21 |
+
]
|
| 22 |
+
},
|
| 23 |
+
{
|
| 24 |
+
"cell_type": "markdown",
|
| 25 |
+
"id": "16f93992-88dd-409b-8370-b86302e1ce6a",
|
| 26 |
+
"metadata": {},
|
| 27 |
+
"source": [
|
| 28 |
+
"## Setup"
|
| 29 |
+
]
|
| 30 |
+
},
|
| 31 |
+
{
|
| 32 |
+
"cell_type": "code",
|
| 33 |
+
"execution_count": null,
|
| 34 |
+
"id": "6d2403bb-70a1-4744-be0b-d259234c1b62",
|
| 35 |
+
"metadata": {},
|
| 36 |
+
"outputs": [],
|
| 37 |
+
"source": [
|
| 38 |
+
"#| hide\n",
|
| 39 |
+
"from nbdev.showdoc import *"
|
| 40 |
+
]
|
| 41 |
+
},
|
| 42 |
+
{
|
| 43 |
+
"cell_type": "code",
|
| 44 |
+
"execution_count": null,
|
| 45 |
+
"id": "477ba22b-55c1-467e-8206-a92f88a598fd",
|
| 46 |
+
"metadata": {},
|
| 47 |
+
"outputs": [
|
| 48 |
+
{
|
| 49 |
+
"name": "stderr",
|
| 50 |
+
"output_type": "stream",
|
| 51 |
+
"text": [
|
| 52 |
+
"C:\\Users\\deepa\\AppData\\Local\\Programs\\Python\\Python312\\Lib\\site-packages\\tqdm\\auto.py:21: TqdmWarning: IProgress not found. Please update jupyter and ipywidgets. See https://ipywidgets.readthedocs.io/en/stable/user_install.html\n",
|
| 53 |
+
" from .autonotebook import tqdm as notebook_tqdm\n"
|
| 54 |
+
]
|
| 55 |
+
}
|
| 56 |
+
],
|
| 57 |
+
"source": [
|
| 58 |
+
"#| export\n",
|
| 59 |
+
"from typing import Dict, List, Optional, Any, Tuple\n",
|
| 60 |
+
"import os\n",
|
| 61 |
+
"import json\n",
|
| 62 |
+
"import logging\n",
|
| 63 |
+
"from pathlib import Path\n",
|
| 64 |
+
"from datetime import datetime\n",
|
| 65 |
+
"from dotenv import load_dotenv\n",
|
| 66 |
+
"import aiohttp\n",
|
| 67 |
+
"import re\n",
|
| 68 |
+
"from collections import defaultdict\n",
|
| 69 |
+
"from wardbuddy.learning_context import LearningContext, setup_logger\n",
|
| 70 |
+
"\n",
|
| 71 |
+
"# Load environment variables\n",
|
| 72 |
+
"load_dotenv()\n",
|
| 73 |
+
"\n",
|
| 74 |
+
"logger = setup_logger(__name__)"
|
| 75 |
+
]
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"cell_type": "markdown",
|
| 79 |
+
"id": "7da445d7-7f51-44d5-b027-e2cf65c79069",
|
| 80 |
+
"metadata": {},
|
| 81 |
+
"source": [
|
| 82 |
+
"## Adaptive Clinical Tutor"
|
| 83 |
+
]
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"cell_type": "markdown",
|
| 87 |
+
"id": "58d76615-480c-4fe4-9d4a-e67dd892132a",
|
| 88 |
+
"metadata": {},
|
| 89 |
+
"source": [
|
| 90 |
+
"This module implements:\n",
|
| 91 |
+
"\n",
|
| 92 |
+
" - Engages in natural case discussions like a clinical supervisor\n",
|
| 93 |
+
" - Provides context-aware feedback based on student's rotation and preferences\n",
|
| 94 |
+
" - Analyzes discussions to track learning progress\n",
|
| 95 |
+
" - Integrates with the student's learning context\n",
|
| 96 |
+
"\n",
|
| 97 |
+
"The tutor aims to mimic real-world clinical teaching interactions where students present cases and receive feedback in a natural conversational style.\n"
|
| 98 |
+
]
|
| 99 |
+
},
|
| 100 |
+
{
|
| 101 |
+
"cell_type": "code",
|
| 102 |
+
"execution_count": null,
|
| 103 |
+
"id": "da7d2115-b30f-40ba-9566-bcbaf155026d",
|
| 104 |
+
"metadata": {},
|
| 105 |
+
"outputs": [],
|
| 106 |
+
"source": [
|
| 107 |
+
"#| export \n",
|
| 108 |
+
"class OpenRouterException(Exception):\n",
|
| 109 |
+
" \"\"\"Custom exception for OpenRouter API errors\"\"\"\n",
|
| 110 |
+
" pass"
|
| 111 |
+
]
|
| 112 |
+
},
|
| 113 |
+
{
|
| 114 |
+
"cell_type": "code",
|
| 115 |
+
"execution_count": null,
|
| 116 |
+
"id": "75c2cbfc-75e7-45ee-9d86-b931f81a3ad5",
|
| 117 |
+
"metadata": {},
|
| 118 |
+
"outputs": [],
|
| 119 |
+
"source": [
|
| 120 |
+
"#| export\n",
|
| 121 |
+
"class ClinicalTutor:\n",
|
| 122 |
+
" \"\"\"\n",
|
| 123 |
+
" Adaptive clinical teaching module that provides context-aware feedback.\n",
|
| 124 |
+
" \n",
|
| 125 |
+
" The tutor acts as an experienced clinical supervisor, engaging in natural\n",
|
| 126 |
+
" case discussions while tracking student progress and adapting feedback\n",
|
| 127 |
+
" based on learning context.\n",
|
| 128 |
+
" \n",
|
| 129 |
+
" Attributes:\n",
|
| 130 |
+
" learning_context (LearningContext): Student's learning context\n",
|
| 131 |
+
" model (str): LLM model identifier\n",
|
| 132 |
+
" api_url (str): OpenRouter API endpoint\n",
|
| 133 |
+
" \"\"\"\n",
|
| 134 |
+
" \n",
|
| 135 |
+
" def __init__(\n",
|
| 136 |
+
" self,\n",
|
| 137 |
+
" context_path: Optional[Path] = None,\n",
|
| 138 |
+
" model: str = \"anthropic/claude-3.5-sonnet\"\n",
|
| 139 |
+
" ):\n",
|
| 140 |
+
" \"\"\"\n",
|
| 141 |
+
" Initialize clinical tutor.\n",
|
| 142 |
+
" \n",
|
| 143 |
+
" Args:\n",
|
| 144 |
+
" context_path: Optional path for context persistence\n",
|
| 145 |
+
" model: Model identifier for OpenRouter\n",
|
| 146 |
+
" \"\"\"\n",
|
| 147 |
+
" self.api_key: str = os.getenv(\"OPENROUTER_API_KEY\")\n",
|
| 148 |
+
" if not self.api_key:\n",
|
| 149 |
+
" raise ValueError(\"OpenRouter API key not found\")\n",
|
| 150 |
+
" \n",
|
| 151 |
+
" self.api_url: str = \"https://openrouter.ai/api/v1/chat/completions\"\n",
|
| 152 |
+
" self.model: str = model\n",
|
| 153 |
+
" \n",
|
| 154 |
+
" self.learning_context = LearningContext(context_path)\n",
|
| 155 |
+
" self.context_path = context_path\n",
|
| 156 |
+
" \n",
|
| 157 |
+
" # Track conversation state\n",
|
| 158 |
+
" self.current_case: Dict = {\n",
|
| 159 |
+
" \"started\": None,\n",
|
| 160 |
+
" \"chief_complaint\": None,\n",
|
| 161 |
+
" \"key_findings\": [],\n",
|
| 162 |
+
" \"assessment\": None,\n",
|
| 163 |
+
" \"plan\": None\n",
|
| 164 |
+
" }\n",
|
| 165 |
+
" \n",
|
| 166 |
+
" logger.info(f\"Clinical tutor initialized with model: {model}\")\n",
|
| 167 |
+
" \n",
|
| 168 |
+
" async def _get_completion(\n",
|
| 169 |
+
" self,\n",
|
| 170 |
+
" messages: List[Dict],\n",
|
| 171 |
+
" temperature: float = 0.7,\n",
|
| 172 |
+
" max_retries: int = 3\n",
|
| 173 |
+
" ) -> str:\n",
|
| 174 |
+
" \"\"\"\n",
|
| 175 |
+
" Get completion from OpenRouter API with retry logic.\n",
|
| 176 |
+
" \n",
|
| 177 |
+
" Args:\n",
|
| 178 |
+
" messages: List of conversation messages\n",
|
| 179 |
+
" temperature: Temperature for response generation\n",
|
| 180 |
+
" max_retries: Maximum retry attempts\n",
|
| 181 |
+
" \n",
|
| 182 |
+
" Returns:\n",
|
| 183 |
+
" str: Model response\n",
|
| 184 |
+
" \n",
|
| 185 |
+
" Raises:\n",
|
| 186 |
+
" OpenRouterException: If API calls fail after retries\n",
|
| 187 |
+
" \"\"\"\n",
|
| 188 |
+
" headers = {\n",
|
| 189 |
+
" \"Authorization\": f\"Bearer {self.api_key}\",\n",
|
| 190 |
+
" \"Content-Type\": \"application/json\",\n",
|
| 191 |
+
" \"HTTP-Referer\": \"http://localhost:7860\"\n",
|
| 192 |
+
" }\n",
|
| 193 |
+
" \n",
|
| 194 |
+
" data = {\n",
|
| 195 |
+
" \"model\": self.model,\n",
|
| 196 |
+
" \"messages\": messages,\n",
|
| 197 |
+
" \"temperature\": temperature,\n",
|
| 198 |
+
" \"max_tokens\": 2000\n",
|
| 199 |
+
" }\n",
|
| 200 |
+
" \n",
|
| 201 |
+
" for attempt in range(max_retries):\n",
|
| 202 |
+
" try:\n",
|
| 203 |
+
" async with aiohttp.ClientSession() as session:\n",
|
| 204 |
+
" async with session.post(\n",
|
| 205 |
+
" self.api_url,\n",
|
| 206 |
+
" headers=headers,\n",
|
| 207 |
+
" json=data,\n",
|
| 208 |
+
" timeout=30\n",
|
| 209 |
+
" ) as response:\n",
|
| 210 |
+
" response.raise_for_status()\n",
|
| 211 |
+
" result = await response.json()\n",
|
| 212 |
+
" return result[\"choices\"][0][\"message\"][\"content\"]\n",
|
| 213 |
+
" \n",
|
| 214 |
+
" except Exception as e:\n",
|
| 215 |
+
" if attempt == max_retries - 1:\n",
|
| 216 |
+
" raise OpenRouterException(f\"API call failed: {str(e)}\")\n",
|
| 217 |
+
" logger.warning(f\"Retry {attempt + 1} after error: {str(e)}\")\n",
|
| 218 |
+
" # Could add exponential backoff here if needed\n",
|
| 219 |
+
" \n",
|
| 220 |
+
" def _build_discussion_prompt(self) -> str:\n",
|
| 221 |
+
" \"\"\"Build context-aware prompt for case discussion.\"\"\"\n",
|
| 222 |
+
" rotation = self.learning_context.current_rotation\n",
|
| 223 |
+
" active_preferences = [\n",
|
| 224 |
+
" p[\"focus\"] for p in self.learning_context.feedback_preferences \n",
|
| 225 |
+
" if p[\"active\"]\n",
|
| 226 |
+
" ]\n",
|
| 227 |
+
" \n",
|
| 228 |
+
" significant_gaps = {\n",
|
| 229 |
+
" topic: score for topic, score \n",
|
| 230 |
+
" in self.learning_context.knowledge_profile[\"gaps\"].items()\n",
|
| 231 |
+
" if score < 0.7 # Only include significant gaps\n",
|
| 232 |
+
" }\n",
|
| 233 |
+
" \n",
|
| 234 |
+
" prompt = f\"\"\"You are an experienced clinical supervisor in {rotation['specialty']}. Act as an engaging and conversational tutor who coaches towards deeper understanding through Socratic dialogue and targeted questions.\n",
|
| 235 |
+
"\n",
|
| 236 |
+
" Key Principles:\n",
|
| 237 |
+
" 1. Assume I have strong foundational knowledge in medicine, clinical reasoning, and pre-medical sciences\n",
|
| 238 |
+
" 2. Focus on high-level connections and nuanced clinical decision-making\n",
|
| 239 |
+
" 3. Use targeted questions to explore my thought process and highlight key learning points\n",
|
| 240 |
+
" 4. Share relevant clinical pearls and real-world applications\n",
|
| 241 |
+
" 5. Be conversational and engaging, avoiding lecture-style responses\n",
|
| 242 |
+
" \n",
|
| 243 |
+
" Current Rotation Focus Areas:\n",
|
| 244 |
+
" {', '.join(rotation['key_focus_areas'])}\n",
|
| 245 |
+
"\n",
|
| 246 |
+
" Areas for Deep Dive:\n",
|
| 247 |
+
" {', '.join(f'{topic} (confidence: {score:.1f})' for topic, score in significant_gaps.items()) if significant_gaps else 'General clinical reasoning'}\n",
|
| 248 |
+
"\n",
|
| 249 |
+
" Student's Interests:\n",
|
| 250 |
+
" {', '.join(active_preferences) if active_preferences else 'Broad clinical discussion'}\n",
|
| 251 |
+
"\n",
|
| 252 |
+
" Ask probing questions that explore clinical reasoning and highlight important connections. I will ask for clarification \n",
|
| 253 |
+
" if concepts need more explanation.\"\"\"\n",
|
| 254 |
+
"\n",
|
| 255 |
+
" return prompt\n",
|
| 256 |
+
" \n",
|
| 257 |
+
" def _build_analysis_prompt(self, conversation: List[Dict[str, str]]) -> str:\n",
|
| 258 |
+
" \"\"\"\n",
|
| 259 |
+
" Build prompt for post-discussion analysis.\n",
|
| 260 |
+
" \n",
|
| 261 |
+
" Args:\n",
|
| 262 |
+
" conversation: List of message dictionaries with roles and content\n",
|
| 263 |
+
" \n",
|
| 264 |
+
" Returns:\n",
|
| 265 |
+
" str: Analysis prompt\n",
|
| 266 |
+
" \"\"\"\n",
|
| 267 |
+
" # Extract case details\n",
|
| 268 |
+
" case_content = \"\"\n",
|
| 269 |
+
" for msg in conversation:\n",
|
| 270 |
+
" if msg[\"role\"] == \"user\":\n",
|
| 271 |
+
" case_content += msg[\"content\"] + \"\\n\"\n",
|
| 272 |
+
" \n",
|
| 273 |
+
" return f\"\"\"Analyze the following case discussion between a medical student and \n",
|
| 274 |
+
" clinical supervisor. Focus on the student's demonstrated knowledge, skills, \n",
|
| 275 |
+
" and areas for improvement.\n",
|
| 276 |
+
"\n",
|
| 277 |
+
" Case Content:\n",
|
| 278 |
+
" {case_content}\n",
|
| 279 |
+
"\n",
|
| 280 |
+
" Please identify:\n",
|
| 281 |
+
" 1. Key clinical concepts and learning points demonstrated or discussed\n",
|
| 282 |
+
" 2. Areas where the student showed uncertainty or knowledge gaps\n",
|
| 283 |
+
" 3. Strengths demonstrated in clinical reasoning and presentation\n",
|
| 284 |
+
" 4. Specific learning objectives that would help the student's development\n",
|
| 285 |
+
"\n",
|
| 286 |
+
" Frame your response to help with ongoing learning:\n",
|
| 287 |
+
" - Start with positive observations\n",
|
| 288 |
+
" - Be specific about knowledge gaps\n",
|
| 289 |
+
" - Make concrete suggestions for improvement\n",
|
| 290 |
+
" - Connect to practical clinical scenarios\"\"\"\n",
|
| 291 |
+
" \n",
|
| 292 |
+
" async def discuss_case(\n",
|
| 293 |
+
" self, \n",
|
| 294 |
+
" message: str,\n",
|
| 295 |
+
" temperature: float = 0.7\n",
|
| 296 |
+
" ) -> str:\n",
|
| 297 |
+
" \"\"\"\n",
|
| 298 |
+
" Natural case discussion with context-aware responses.\n",
|
| 299 |
+
" \n",
|
| 300 |
+
" Args:\n",
|
| 301 |
+
" message: Student's input message\n",
|
| 302 |
+
" temperature: Temperature for response generation\n",
|
| 303 |
+
" \n",
|
| 304 |
+
" Returns:\n",
|
| 305 |
+
" str: Clinical supervisor's response\n",
|
| 306 |
+
" \"\"\"\n",
|
| 307 |
+
" try:\n",
|
| 308 |
+
" # Update case tracking\n",
|
| 309 |
+
" if not self.current_case[\"started\"]:\n",
|
| 310 |
+
" self.current_case[\"started\"] = datetime.now()\n",
|
| 311 |
+
" # Try to identify chief complaint from first message\n",
|
| 312 |
+
" cc_match = re.search(r\"(\\d+)\\s*[yY][oO]\\s*[MmFf]\\s*with\\s*([^.]*)\", message)\n",
|
| 313 |
+
" if cc_match:\n",
|
| 314 |
+
" self.current_case[\"chief_complaint\"] = cc_match.group(2).strip()\n",
|
| 315 |
+
" \n",
|
| 316 |
+
" # Build system prompt\n",
|
| 317 |
+
" system_prompt = self._build_discussion_prompt()\n",
|
| 318 |
+
" \n",
|
| 319 |
+
" messages = [{\n",
|
| 320 |
+
" \"role\": \"system\",\n",
|
| 321 |
+
" \"content\": system_prompt\n",
|
| 322 |
+
" }, {\n",
|
| 323 |
+
" \"role\": \"user\",\n",
|
| 324 |
+
" \"content\": message\n",
|
| 325 |
+
" }]\n",
|
| 326 |
+
" \n",
|
| 327 |
+
" response = await self._get_completion(messages, temperature)\n",
|
| 328 |
+
" return response\n",
|
| 329 |
+
" \n",
|
| 330 |
+
" except Exception as e:\n",
|
| 331 |
+
" logger.error(f\"Error in case discussion: {str(e)}\")\n",
|
| 332 |
+
" return \"I apologize, but I encountered an error. Please try presenting your case again.\"\n",
|
| 333 |
+
" \n",
|
| 334 |
+
" async def analyze_discussion(\n",
|
| 335 |
+
" self,\n",
|
| 336 |
+
" conversation: List[Dict[str, str]]\n",
|
| 337 |
+
" ) -> Dict[str, Any]:\n",
|
| 338 |
+
" \"\"\"\n",
|
| 339 |
+
" Analyze completed case discussion for learning insights.\n",
|
| 340 |
+
" \n",
|
| 341 |
+
" Args:\n",
|
| 342 |
+
" conversation: List of message dictionaries with roles and content\n",
|
| 343 |
+
" \n",
|
| 344 |
+
" Returns:\n",
|
| 345 |
+
" dict: Analysis results containing:\n",
|
| 346 |
+
" - learning_points: List of key concepts learned\n",
|
| 347 |
+
" - gaps: Dict of identified knowledge gaps\n",
|
| 348 |
+
" - strengths: List of demonstrated strengths\n",
|
| 349 |
+
" - suggested_objectives: List of recommended learning goals\n",
|
| 350 |
+
" \"\"\"\n",
|
| 351 |
+
" try:\n",
|
| 352 |
+
" # Reset case tracking\n",
|
| 353 |
+
" self.current_case = {\n",
|
| 354 |
+
" \"started\": None,\n",
|
| 355 |
+
" \"chief_complaint\": None,\n",
|
| 356 |
+
" \"key_findings\": [],\n",
|
| 357 |
+
" \"assessment\": None,\n",
|
| 358 |
+
" \"plan\": None\n",
|
| 359 |
+
" }\n",
|
| 360 |
+
" \n",
|
| 361 |
+
" # Get analysis from model\n",
|
| 362 |
+
" analysis_prompt = self._build_analysis_prompt(conversation)\n",
|
| 363 |
+
" messages = [{\n",
|
| 364 |
+
" \"role\": \"system\",\n",
|
| 365 |
+
" \"content\": analysis_prompt\n",
|
| 366 |
+
" }]\n",
|
| 367 |
+
" messages.extend(conversation)\n",
|
| 368 |
+
" \n",
|
| 369 |
+
" response = await self._get_completion(messages, temperature=0.3)\n",
|
| 370 |
+
" \n",
|
| 371 |
+
" # Parse insights\n",
|
| 372 |
+
" insights = self._parse_analysis(response)\n",
|
| 373 |
+
" \n",
|
| 374 |
+
" # Update learning context\n",
|
| 375 |
+
" self._update_context_from_analysis(insights)\n",
|
| 376 |
+
" \n",
|
| 377 |
+
" return insights\n",
|
| 378 |
+
" \n",
|
| 379 |
+
" except Exception as e:\n",
|
| 380 |
+
" logger.error(f\"Error in discussion analysis: {str(e)}\")\n",
|
| 381 |
+
" return {\n",
|
| 382 |
+
" \"learning_points\": [],\n",
|
| 383 |
+
" \"gaps\": {},\n",
|
| 384 |
+
" \"strengths\": [],\n",
|
| 385 |
+
" \"suggested_objectives\": []\n",
|
| 386 |
+
" }\n",
|
| 387 |
+
" \n",
|
| 388 |
+
" def _parse_analysis(self, response: str) -> Dict[str, Any]:\n",
|
| 389 |
+
" \"\"\"\n",
|
| 390 |
+
" Parse analysis response into structured insights.\n",
|
| 391 |
+
" \n",
|
| 392 |
+
" Uses pattern matching and basic NLP to extract:\n",
|
| 393 |
+
" - Learning points (key concepts discussed)\n",
|
| 394 |
+
" - Knowledge gaps with confidence estimates\n",
|
| 395 |
+
" - Demonstrated strengths\n",
|
| 396 |
+
" - Suggested learning objectives\n",
|
| 397 |
+
" \n",
|
| 398 |
+
" Args:\n",
|
| 399 |
+
" response: Raw analysis response\n",
|
| 400 |
+
" \n",
|
| 401 |
+
" Returns:\n",
|
| 402 |
+
" dict: Structured analysis insights\n",
|
| 403 |
+
" \"\"\"\n",
|
| 404 |
+
" insights = {\n",
|
| 405 |
+
" \"learning_points\": [],\n",
|
| 406 |
+
" \"gaps\": {},\n",
|
| 407 |
+
" \"strengths\": [],\n",
|
| 408 |
+
" \"suggested_objectives\": []\n",
|
| 409 |
+
" }\n",
|
| 410 |
+
" \n",
|
| 411 |
+
" try:\n",
|
| 412 |
+
" # Split into sections\n",
|
| 413 |
+
" sections = response.lower().split(\"\\n\\n\")\n",
|
| 414 |
+
" \n",
|
| 415 |
+
" for section in sections:\n",
|
| 416 |
+
" if \"learning point\" in section or \"key concept\" in section:\n",
|
| 417 |
+
" # Extract bullet points or numbered items\n",
|
| 418 |
+
" points = re.findall(r\"[-•*]\\s*(.+)$\", section, re.MULTILINE)\n",
|
| 419 |
+
" insights[\"learning_points\"].extend(points)\n",
|
| 420 |
+
" \n",
|
| 421 |
+
" elif \"gap\" in section or \"uncertainty\" in section:\n",
|
| 422 |
+
" # Look for topic mentions with confidence indicators\n",
|
| 423 |
+
" gaps = re.findall(\n",
|
| 424 |
+
" r\"(limited|uncertain|unclear|difficulty with)\\s+([^,.]+)\", \n",
|
| 425 |
+
" section\n",
|
| 426 |
+
" )\n",
|
| 427 |
+
" for indicator, topic in gaps:\n",
|
| 428 |
+
" # Estimate confidence based on language\n",
|
| 429 |
+
" confidence = 0.4 if \"limited\" in indicator else 0.6\n",
|
| 430 |
+
" insights[\"gaps\"][topic.strip()] = confidence\n",
|
| 431 |
+
" \n",
|
| 432 |
+
" elif \"strength\" in section or \"demonstrated\" in section:\n",
|
| 433 |
+
" # Extract positive mentions\n",
|
| 434 |
+
" strengths = re.findall(r\"[-•*]\\s*(.+)$\", section, re.MULTILINE)\n",
|
| 435 |
+
" insights[\"strengths\"].extend(strengths)\n",
|
| 436 |
+
" \n",
|
| 437 |
+
" elif \"objective\" in section or \"suggest\" in section:\n",
|
| 438 |
+
" # Extract recommended objectives\n",
|
| 439 |
+
" objectives = re.findall(r\"[-•*]\\s*(.+)$\", section, re.MULTILINE)\n",
|
| 440 |
+
" insights[\"suggested_objectives\"].extend(objectives)\n",
|
| 441 |
+
" \n",
|
| 442 |
+
" return insights\n",
|
| 443 |
+
" \n",
|
| 444 |
+
" except Exception as e:\n",
|
| 445 |
+
" logger.error(f\"Error parsing analysis: {str(e)}\")\n",
|
| 446 |
+
" return insights\n",
|
| 447 |
+
" \n",
|
| 448 |
+
" def _update_context_from_analysis(self, insights: Dict[str, Any]) -> None:\n",
|
| 449 |
+
" \"\"\"\n",
|
| 450 |
+
" Update learning context based on discussion analysis.\n",
|
| 451 |
+
" \n",
|
| 452 |
+
" Args:\n",
|
| 453 |
+
" insights: Dictionary of analysis insights\n",
|
| 454 |
+
" \"\"\"\n",
|
| 455 |
+
" try:\n",
|
| 456 |
+
" # Update knowledge gaps\n",
|
| 457 |
+
" for topic, confidence in insights[\"gaps\"].items():\n",
|
| 458 |
+
" self.learning_context.update_knowledge_gap(topic, confidence)\n",
|
| 459 |
+
" \n",
|
| 460 |
+
" # Add strengths\n",
|
| 461 |
+
" for strength in insights[\"strengths\"]:\n",
|
| 462 |
+
" self.learning_context.add_strength(strength)\n",
|
| 463 |
+
" \n",
|
| 464 |
+
" # Save context if path provided\n",
|
| 465 |
+
" if self.context_path:\n",
|
| 466 |
+
" self.learning_context.save_context(self.context_path)\n",
|
| 467 |
+
" \n",
|
| 468 |
+
" except Exception as e:\n",
|
| 469 |
+
" logger.error(f\"Error updating context: {str(e)}\")"
|
| 470 |
+
]
|
| 471 |
+
},
|
| 472 |
+
{
|
| 473 |
+
"cell_type": "markdown",
|
| 474 |
+
"id": "6a2b15f5-6841-43cb-9b57-c0e3f1a0b0c2",
|
| 475 |
+
"metadata": {},
|
| 476 |
+
"source": [
|
| 477 |
+
"## Tests"
|
| 478 |
+
]
|
| 479 |
+
},
|
| 480 |
+
{
|
| 481 |
+
"cell_type": "code",
|
| 482 |
+
"execution_count": null,
|
| 483 |
+
"id": "67ee6bde-4ade-448e-a831-86f9f7ae82ea",
|
| 484 |
+
"metadata": {},
|
| 485 |
+
"outputs": [
|
| 486 |
+
{
|
| 487 |
+
"ename": "RuntimeError",
|
| 488 |
+
"evalue": "asyncio.run() cannot be called from a running event loop",
|
| 489 |
+
"output_type": "error",
|
| 490 |
+
"traceback": [
|
| 491 |
+
"\u001b[1;31m---------------------------------------------------------------------------\u001b[0m",
|
| 492 |
+
"\u001b[1;31mRuntimeError\u001b[0m Traceback (most recent call last)",
|
| 493 |
+
"Cell \u001b[1;32mIn[7], line 55\u001b[0m\n\u001b[0;32m 53\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m \u001b[38;5;18m__name__\u001b[39m \u001b[38;5;241m==\u001b[39m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124m__main__\u001b[39m\u001b[38;5;124m\"\u001b[39m:\n\u001b[0;32m 54\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01masyncio\u001b[39;00m\n\u001b[1;32m---> 55\u001b[0m \u001b[43masyncio\u001b[49m\u001b[38;5;241;43m.\u001b[39;49m\u001b[43mrun\u001b[49m\u001b[43m(\u001b[49m\u001b[43mtest_clinical_tutor\u001b[49m\u001b[43m(\u001b[49m\u001b[43m)\u001b[49m\u001b[43m)\u001b[49m\n",
|
| 494 |
+
"File \u001b[1;32m~\\AppData\\Local\\Programs\\Python\\Python312\\Lib\\asyncio\\runners.py:190\u001b[0m, in \u001b[0;36mrun\u001b[1;34m(main, debug, loop_factory)\u001b[0m\n\u001b[0;32m 161\u001b[0m \u001b[38;5;250m\u001b[39m\u001b[38;5;124;03m\"\"\"Execute the coroutine and return the result.\u001b[39;00m\n\u001b[0;32m 162\u001b[0m \n\u001b[0;32m 163\u001b[0m \u001b[38;5;124;03mThis function runs the passed coroutine, taking care of\u001b[39;00m\n\u001b[1;32m (...)\u001b[0m\n\u001b[0;32m 186\u001b[0m \u001b[38;5;124;03m asyncio.run(main())\u001b[39;00m\n\u001b[0;32m 187\u001b[0m \u001b[38;5;124;03m\"\"\"\u001b[39;00m\n\u001b[0;32m 188\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m events\u001b[38;5;241m.\u001b[39m_get_running_loop() \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;129;01mnot\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m:\n\u001b[0;32m 189\u001b[0m \u001b[38;5;66;03m# fail fast with short traceback\u001b[39;00m\n\u001b[1;32m--> 190\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m \u001b[38;5;167;01mRuntimeError\u001b[39;00m(\n\u001b[0;32m 191\u001b[0m \u001b[38;5;124m\"\u001b[39m\u001b[38;5;124masyncio.run() cannot be called from a running event loop\u001b[39m\u001b[38;5;124m\"\u001b[39m)\n\u001b[0;32m 193\u001b[0m \u001b[38;5;28;01mwith\u001b[39;00m Runner(debug\u001b[38;5;241m=\u001b[39mdebug, loop_factory\u001b[38;5;241m=\u001b[39mloop_factory) \u001b[38;5;28;01mas\u001b[39;00m runner:\n\u001b[0;32m 194\u001b[0m \u001b[38;5;28;01mreturn\u001b[39;00m runner\u001b[38;5;241m.\u001b[39mrun(main)\n",
|
| 495 |
+
"\u001b[1;31mRuntimeError\u001b[0m: asyncio.run() cannot be called from a running event loop"
|
| 496 |
+
]
|
| 497 |
+
}
|
| 498 |
+
],
|
| 499 |
+
"source": [
|
| 500 |
+
"async def test_clinical_tutor():\n",
|
| 501 |
+
" \"\"\"Test ClinicalTutor functionality\"\"\"\n",
|
| 502 |
+
" if not os.getenv(\"OPENROUTER_API_KEY\"):\n",
|
| 503 |
+
" print(\"Skipping tests: No API key\")\n",
|
| 504 |
+
" return\n",
|
| 505 |
+
" \n",
|
| 506 |
+
" tutor = ClinicalTutor()\n",
|
| 507 |
+
" \n",
|
| 508 |
+
" # Test case discussion\n",
|
| 509 |
+
" test_case = \"\"\"\n",
|
| 510 |
+
" 28yo M with chest pain\n",
|
| 511 |
+
" - 2 days duration\n",
|
| 512 |
+
" - Sharp, pleuritic\n",
|
| 513 |
+
" - No fever or cough\n",
|
| 514 |
+
" - Vitals stable\n",
|
| 515 |
+
" - Clear exam\n",
|
| 516 |
+
" A/P: Likely MSK pain\n",
|
| 517 |
+
" \"\"\"\n",
|
| 518 |
+
" \n",
|
| 519 |
+
" try:\n",
|
| 520 |
+
" # Test basic discussion\n",
|
| 521 |
+
" response = await tutor.discuss_case(test_case)\n",
|
| 522 |
+
" assert isinstance(response, str)\n",
|
| 523 |
+
" assert len(response) > 0\n",
|
| 524 |
+
" \n",
|
| 525 |
+
" # Only assert case tracking if chief complaint was detected\n",
|
| 526 |
+
" if tutor.current_case[\"chief_complaint\"]:\n",
|
| 527 |
+
" assert \"chest pain\" in tutor.current_case[\"chief_complaint\"].lower()\n",
|
| 528 |
+
" \n",
|
| 529 |
+
" print(\"Discussion test passed\")\n",
|
| 530 |
+
" \n",
|
| 531 |
+
" # Test discussion analysis\n",
|
| 532 |
+
" conversation = [\n",
|
| 533 |
+
" {\"role\": \"user\", \"content\": test_case},\n",
|
| 534 |
+
" {\"role\": \"assistant\", \"content\": response}\n",
|
| 535 |
+
" ]\n",
|
| 536 |
+
" \n",
|
| 537 |
+
" analysis = await tutor.analyze_discussion(conversation)\n",
|
| 538 |
+
" assert isinstance(analysis, dict)\n",
|
| 539 |
+
" assert all(k in analysis for k in [\n",
|
| 540 |
+
" 'learning_points', 'gaps', 'strengths', 'suggested_objectives'\n",
|
| 541 |
+
" ])\n",
|
| 542 |
+
" print(\"Analysis test passed\")\n",
|
| 543 |
+
" \n",
|
| 544 |
+
" except Exception as e:\n",
|
| 545 |
+
" print(f\"Test failed: {str(e)}\")\n",
|
| 546 |
+
" raise\n",
|
| 547 |
+
" \n",
|
| 548 |
+
" print(\"All clinical tutor tests passed!\")\n",
|
| 549 |
+
"\n",
|
| 550 |
+
"# Run tests\n",
|
| 551 |
+
"if __name__ == \"__main__\":\n",
|
| 552 |
+
" import asyncio\n",
|
| 553 |
+
" if not asyncio.get_event_loop().is_running():\n",
|
| 554 |
+
" asyncio.run(test_clinical_tutor())"
|
| 555 |
+
]
|
| 556 |
+
},
|
| 557 |
+
{
|
| 558 |
+
"cell_type": "code",
|
| 559 |
+
"execution_count": null,
|
| 560 |
+
"id": "3f469c37-afe3-4682-9cc4-40326ac21b74",
|
| 561 |
+
"metadata": {},
|
| 562 |
+
"outputs": [],
|
| 563 |
+
"source": []
|
| 564 |
+
}
|
| 565 |
+
],
|
| 566 |
+
"metadata": {
|
| 567 |
+
"kernelspec": {
|
| 568 |
+
"display_name": "python3",
|
| 569 |
+
"language": "python",
|
| 570 |
+
"name": "python3"
|
| 571 |
+
}
|
| 572 |
+
},
|
| 573 |
+
"nbformat": 4,
|
| 574 |
+
"nbformat_minor": 5
|
| 575 |
+
}
|
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|
nbs/02_learning_interface.ipynb
CHANGED
|
@@ -90,49 +90,111 @@
|
|
| 90 |
"def create_dashboard_css() -> str:\n",
|
| 91 |
" \"\"\"Create custom CSS for dashboard styling\"\"\"\n",
|
| 92 |
" return \"\"\"\n",
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 93 |
" .dashboard-card {\n",
|
| 94 |
-
"
|
| 95 |
-
" border
|
| 96 |
-
"
|
| 97 |
-
"
|
| 98 |
-
"
|
|
|
|
| 99 |
" }\n",
|
| 100 |
" \n",
|
| 101 |
-
"
|
| 102 |
-
"
|
| 103 |
-
"
|
|
|
|
| 104 |
" }\n",
|
| 105 |
" \n",
|
| 106 |
-
"
|
| 107 |
-
"
|
|
|
|
|
|
|
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|
| 108 |
" }\n",
|
| 109 |
" \n",
|
| 110 |
-
" .
|
| 111 |
-
"
|
| 112 |
-
"
|
| 113 |
-
"
|
|
|
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|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 114 |
" }\n",
|
| 115 |
" \n",
|
| 116 |
-
" .
|
| 117 |
-
"
|
| 118 |
" }\n",
|
| 119 |
" \n",
|
| 120 |
-
"
|
| 121 |
-
"
|
| 122 |
-
"
|
| 123 |
-
"
|
| 124 |
-
"
|
| 125 |
-
"
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
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|
| 126 |
" }\n",
|
| 127 |
" \n",
|
| 128 |
-
"
|
| 129 |
-
"
|
| 130 |
-
" color: #
|
|
|
|
| 131 |
" }\n",
|
| 132 |
" \n",
|
| 133 |
-
"
|
| 134 |
-
"
|
| 135 |
-
" color: #718096;\n",
|
| 136 |
" }\n",
|
| 137 |
" \"\"\""
|
| 138 |
]
|
|
|
|
| 90 |
"def create_dashboard_css() -> str:\n",
|
| 91 |
" \"\"\"Create custom CSS for dashboard styling\"\"\"\n",
|
| 92 |
" return \"\"\"\n",
|
| 93 |
+
" /* Global styles */\n",
|
| 94 |
+
" .gradio-container {\n",
|
| 95 |
+
" background-color: #0f172a !important; /* slate-900 */\n",
|
| 96 |
+
" }\n",
|
| 97 |
+
" \n",
|
| 98 |
+
" /* Card styling */\n",
|
| 99 |
" .dashboard-card {\n",
|
| 100 |
+
" background-color: #1e293b !important; /* slate-800 */\n",
|
| 101 |
+
" border: 1px solid #334155 !important; /* slate-700 */\n",
|
| 102 |
+
" border-radius: 0.5rem !important;\n",
|
| 103 |
+
" padding: 1rem !important;\n",
|
| 104 |
+
" margin: 0.5rem 0 !important;\n",
|
| 105 |
+
" color: #f1f5f9 !important; /* slate-100 */\n",
|
| 106 |
" }\n",
|
| 107 |
" \n",
|
| 108 |
+
" /* Chat container */\n",
|
| 109 |
+
" .chatbot {\n",
|
| 110 |
+
" background-color: #1e293b !important; /* slate-800 */\n",
|
| 111 |
+
" border-color: #334155 !important; /* slate-700 */\n",
|
| 112 |
" }\n",
|
| 113 |
" \n",
|
| 114 |
+
" /* Message bubbles */\n",
|
| 115 |
+
" .chatbot .message.user {\n",
|
| 116 |
+
" background-color: #334155 !important; /* slate-700 */\n",
|
| 117 |
+
" border: 1px solid #475569 !important; /* slate-600 */\n",
|
| 118 |
+
" color: #f1f5f9 !important; /* slate-100 */\n",
|
| 119 |
" }\n",
|
| 120 |
" \n",
|
| 121 |
+
" .chatbot .message.bot {\n",
|
| 122 |
+
" background-color: #1e40af !important; /* blue-800 */\n",
|
| 123 |
+
" border: 1px solid #1e3a8a !important; /* blue-900 */\n",
|
| 124 |
+
" color: #f1f5f9 !important; /* slate-100 */\n",
|
| 125 |
+
" }\n",
|
| 126 |
+
" \n",
|
| 127 |
+
" /* Input fields */\n",
|
| 128 |
+
" textarea, input[type=\"text\"] {\n",
|
| 129 |
+
" background-color: #334155 !important; /* slate-700 */\n",
|
| 130 |
+
" color: #f1f5f9 !important; /* slate-100 */\n",
|
| 131 |
+
" border: 1px solid #475569 !important; /* slate-600 */\n",
|
| 132 |
+
" }\n",
|
| 133 |
+
" \n",
|
| 134 |
+
" textarea:focus, input[type=\"text\"]:focus {\n",
|
| 135 |
+
" border-color: #3b82f6 !important; /* blue-500 */\n",
|
| 136 |
+
" box-shadow: 0 0 0 2px rgba(59, 130, 246, 0.2) !important;\n",
|
| 137 |
+
" }\n",
|
| 138 |
+
" \n",
|
| 139 |
+
" /* Buttons */\n",
|
| 140 |
+
" button.primary {\n",
|
| 141 |
+
" background-color: #2563eb !important; /* blue-600 */\n",
|
| 142 |
+
" color: white !important;\n",
|
| 143 |
+
" }\n",
|
| 144 |
+
" \n",
|
| 145 |
+
" button.primary:hover {\n",
|
| 146 |
+
" background-color: #3b82f6 !important; /* blue-500 */\n",
|
| 147 |
+
" }\n",
|
| 148 |
+
" \n",
|
| 149 |
+
" button.secondary {\n",
|
| 150 |
+
" background-color: #475569 !important; /* slate-600 */\n",
|
| 151 |
+
" color: white !important;\n",
|
| 152 |
+
" }\n",
|
| 153 |
+
" \n",
|
| 154 |
+
" button.secondary:hover {\n",
|
| 155 |
+
" background-color: #64748b !important; /* slate-500 */\n",
|
| 156 |
+
" }\n",
|
| 157 |
+
" \n",
|
| 158 |
+
" /* Tabs */\n",
|
| 159 |
+
" .tab-nav {\n",
|
| 160 |
+
" background-color: #1e293b !important; /* slate-800 */\n",
|
| 161 |
+
" border-bottom: 1px solid #334155 !important; /* slate-700 */\n",
|
| 162 |
+
" }\n",
|
| 163 |
+
" \n",
|
| 164 |
+
" .tab-nav button {\n",
|
| 165 |
+
" color: #f1f5f9 !important; /* slate-100 */\n",
|
| 166 |
" }\n",
|
| 167 |
" \n",
|
| 168 |
+
" .tab-nav button.selected {\n",
|
| 169 |
+
" border-bottom-color: #3b82f6 !important; /* blue-500 */\n",
|
| 170 |
" }\n",
|
| 171 |
" \n",
|
| 172 |
+
" /* Status indicators */\n",
|
| 173 |
+
" .status-active {\n",
|
| 174 |
+
" color: #22c55e !important; /* green-500 */\n",
|
| 175 |
+
" font-weight: 500 !important;\n",
|
| 176 |
+
" }\n",
|
| 177 |
+
" \n",
|
| 178 |
+
" .status-completed {\n",
|
| 179 |
+
" color: #94a3b8 !important; /* slate-400 */\n",
|
| 180 |
+
" }\n",
|
| 181 |
+
" \n",
|
| 182 |
+
" /* Headers */\n",
|
| 183 |
+
" .dashboard-header {\n",
|
| 184 |
+
" color: #f1f5f9 !important; /* slate-100 */\n",
|
| 185 |
+
" font-size: 1.5rem !important;\n",
|
| 186 |
+
" font-weight: 600 !important;\n",
|
| 187 |
+
" margin-bottom: 1rem !important;\n",
|
| 188 |
" }\n",
|
| 189 |
" \n",
|
| 190 |
+
" /* Tables */\n",
|
| 191 |
+
" table {\n",
|
| 192 |
+
" background-color: #1e293b !important; /* slate-800 */\n",
|
| 193 |
+
" color: #f1f5f9 !important; /* slate-100 */\n",
|
| 194 |
" }\n",
|
| 195 |
" \n",
|
| 196 |
+
" th, td {\n",
|
| 197 |
+
" border-color: #334155 !important; /* slate-700 */\n",
|
|
|
|
| 198 |
" }\n",
|
| 199 |
" \"\"\""
|
| 200 |
]
|
wardbuddy/clinical_tutor.py
CHANGED
|
@@ -129,52 +129,40 @@ class ClinicalTutor:
|
|
| 129 |
# Could add exponential backoff here if needed
|
| 130 |
|
| 131 |
def _build_discussion_prompt(self) -> str:
|
| 132 |
-
"""
|
| 133 |
-
Build context-aware prompt for case discussion.
|
| 134 |
-
|
| 135 |
-
Incorporates:
|
| 136 |
-
- Current rotation details
|
| 137 |
-
- Active feedback preferences
|
| 138 |
-
- Recent learning points
|
| 139 |
-
- Knowledge gaps needing attention
|
| 140 |
-
|
| 141 |
-
Returns:
|
| 142 |
-
str: Contextualized system prompt
|
| 143 |
-
"""
|
| 144 |
rotation = self.learning_context.current_rotation
|
| 145 |
active_preferences = [
|
| 146 |
p["focus"] for p in self.learning_context.feedback_preferences
|
| 147 |
if p["active"]
|
| 148 |
]
|
| 149 |
|
| 150 |
-
# Get relevant knowledge gaps
|
| 151 |
significant_gaps = {
|
| 152 |
topic: score for topic, score
|
| 153 |
in self.learning_context.knowledge_profile["gaps"].items()
|
| 154 |
if score < 0.7 # Only include significant gaps
|
| 155 |
}
|
| 156 |
|
| 157 |
-
prompt = f"""You are an experienced clinical supervisor in {rotation['specialty']}
|
| 158 |
-
providing teaching and feedback. You aim to:
|
| 159 |
-
|
| 160 |
-
1. Help students develop strong clinical reasoning
|
| 161 |
-
2. Connect theory to practical applications
|
| 162 |
-
3. Build diagnostic confidence
|
| 163 |
-
4. Improve presentation skills
|
| 164 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 165 |
Current Rotation Focus Areas:
|
| 166 |
{', '.join(rotation['key_focus_areas'])}
|
| 167 |
|
| 168 |
-
Areas
|
| 169 |
-
{', '.join(f'{topic} (confidence: {score:.1f})' for topic, score in significant_gaps.items()) if significant_gaps else '
|
| 170 |
|
| 171 |
-
Student's
|
| 172 |
-
{', '.join(active_preferences) if active_preferences else '
|
|
|
|
|
|
|
|
|
|
| 173 |
|
| 174 |
-
Engage naturally as a supportive but challenging supervisor would during case
|
| 175 |
-
presentations. Ask probing questions when appropriate, share relevant clinical
|
| 176 |
-
pearls, and help the student build their clinical reasoning skills."""
|
| 177 |
-
|
| 178 |
return prompt
|
| 179 |
|
| 180 |
def _build_analysis_prompt(self, conversation: List[Dict[str, str]]) -> str:
|
|
|
|
| 129 |
# Could add exponential backoff here if needed
|
| 130 |
|
| 131 |
def _build_discussion_prompt(self) -> str:
|
| 132 |
+
"""Build context-aware prompt for case discussion."""
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 133 |
rotation = self.learning_context.current_rotation
|
| 134 |
active_preferences = [
|
| 135 |
p["focus"] for p in self.learning_context.feedback_preferences
|
| 136 |
if p["active"]
|
| 137 |
]
|
| 138 |
|
|
|
|
| 139 |
significant_gaps = {
|
| 140 |
topic: score for topic, score
|
| 141 |
in self.learning_context.knowledge_profile["gaps"].items()
|
| 142 |
if score < 0.7 # Only include significant gaps
|
| 143 |
}
|
| 144 |
|
| 145 |
+
prompt = f"""You are an experienced clinical supervisor in {rotation['specialty']}. Act as an engaging and conversational tutor who coaches towards deeper understanding through Socratic dialogue and targeted questions.
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 146 |
|
| 147 |
+
Key Principles:
|
| 148 |
+
1. Assume I have strong foundational knowledge in medicine, clinical reasoning, and pre-medical sciences
|
| 149 |
+
2. Focus on high-level connections and nuanced clinical decision-making
|
| 150 |
+
3. Use targeted questions to explore my thought process and highlight key learning points
|
| 151 |
+
4. Share relevant clinical pearls and real-world applications
|
| 152 |
+
5. Be conversational and engaging, avoiding lecture-style responses
|
| 153 |
+
|
| 154 |
Current Rotation Focus Areas:
|
| 155 |
{', '.join(rotation['key_focus_areas'])}
|
| 156 |
|
| 157 |
+
Areas for Deep Dive:
|
| 158 |
+
{', '.join(f'{topic} (confidence: {score:.1f})' for topic, score in significant_gaps.items()) if significant_gaps else 'General clinical reasoning'}
|
| 159 |
|
| 160 |
+
Student's Interests:
|
| 161 |
+
{', '.join(active_preferences) if active_preferences else 'Broad clinical discussion'}
|
| 162 |
+
|
| 163 |
+
Ask probing questions that explore clinical reasoning and highlight important connections. I will ask for clarification
|
| 164 |
+
if concepts need more explanation."""
|
| 165 |
|
|
|
|
|
|
|
|
|
|
|
|
|
| 166 |
return prompt
|
| 167 |
|
| 168 |
def _build_analysis_prompt(self, conversation: List[Dict[str, str]]) -> str:
|
wardbuddy/learning_interface.py
CHANGED
|
@@ -21,49 +21,111 @@ logger = setup_logger(__name__)
|
|
| 21 |
def create_dashboard_css() -> str:
|
| 22 |
"""Create custom CSS for dashboard styling"""
|
| 23 |
return """
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 24 |
.dashboard-card {
|
| 25 |
-
|
| 26 |
-
border
|
| 27 |
-
|
| 28 |
-
|
| 29 |
-
|
|
|
|
| 30 |
}
|
| 31 |
|
| 32 |
-
|
| 33 |
-
|
| 34 |
-
|
|
|
|
| 35 |
}
|
| 36 |
|
| 37 |
-
|
| 38 |
-
|
|
|
|
|
|
|
|
|
|
| 39 |
}
|
| 40 |
|
| 41 |
-
.
|
| 42 |
-
|
| 43 |
-
|
| 44 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 45 |
}
|
| 46 |
|
| 47 |
-
.
|
| 48 |
-
|
| 49 |
}
|
| 50 |
|
| 51 |
-
|
| 52 |
-
|
| 53 |
-
|
| 54 |
-
|
| 55 |
-
|
| 56 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 57 |
}
|
| 58 |
|
| 59 |
-
|
| 60 |
-
|
| 61 |
-
color: #
|
|
|
|
| 62 |
}
|
| 63 |
|
| 64 |
-
|
| 65 |
-
|
| 66 |
-
color: #718096;
|
| 67 |
}
|
| 68 |
"""
|
| 69 |
|
|
|
|
| 21 |
def create_dashboard_css() -> str:
|
| 22 |
"""Create custom CSS for dashboard styling"""
|
| 23 |
return """
|
| 24 |
+
/* Global styles */
|
| 25 |
+
.gradio-container {
|
| 26 |
+
background-color: #0f172a !important; /* slate-900 */
|
| 27 |
+
}
|
| 28 |
+
|
| 29 |
+
/* Card styling */
|
| 30 |
.dashboard-card {
|
| 31 |
+
background-color: #1e293b !important; /* slate-800 */
|
| 32 |
+
border: 1px solid #334155 !important; /* slate-700 */
|
| 33 |
+
border-radius: 0.5rem !important;
|
| 34 |
+
padding: 1rem !important;
|
| 35 |
+
margin: 0.5rem 0 !important;
|
| 36 |
+
color: #f1f5f9 !important; /* slate-100 */
|
| 37 |
}
|
| 38 |
|
| 39 |
+
/* Chat container */
|
| 40 |
+
.chatbot {
|
| 41 |
+
background-color: #1e293b !important; /* slate-800 */
|
| 42 |
+
border-color: #334155 !important; /* slate-700 */
|
| 43 |
}
|
| 44 |
|
| 45 |
+
/* Message bubbles */
|
| 46 |
+
.chatbot .message.user {
|
| 47 |
+
background-color: #334155 !important; /* slate-700 */
|
| 48 |
+
border: 1px solid #475569 !important; /* slate-600 */
|
| 49 |
+
color: #f1f5f9 !important; /* slate-100 */
|
| 50 |
}
|
| 51 |
|
| 52 |
+
.chatbot .message.bot {
|
| 53 |
+
background-color: #1e40af !important; /* blue-800 */
|
| 54 |
+
border: 1px solid #1e3a8a !important; /* blue-900 */
|
| 55 |
+
color: #f1f5f9 !important; /* slate-100 */
|
| 56 |
+
}
|
| 57 |
+
|
| 58 |
+
/* Input fields */
|
| 59 |
+
textarea, input[type="text"] {
|
| 60 |
+
background-color: #334155 !important; /* slate-700 */
|
| 61 |
+
color: #f1f5f9 !important; /* slate-100 */
|
| 62 |
+
border: 1px solid #475569 !important; /* slate-600 */
|
| 63 |
+
}
|
| 64 |
+
|
| 65 |
+
textarea:focus, input[type="text"]:focus {
|
| 66 |
+
border-color: #3b82f6 !important; /* blue-500 */
|
| 67 |
+
box-shadow: 0 0 0 2px rgba(59, 130, 246, 0.2) !important;
|
| 68 |
+
}
|
| 69 |
+
|
| 70 |
+
/* Buttons */
|
| 71 |
+
button.primary {
|
| 72 |
+
background-color: #2563eb !important; /* blue-600 */
|
| 73 |
+
color: white !important;
|
| 74 |
+
}
|
| 75 |
+
|
| 76 |
+
button.primary:hover {
|
| 77 |
+
background-color: #3b82f6 !important; /* blue-500 */
|
| 78 |
+
}
|
| 79 |
+
|
| 80 |
+
button.secondary {
|
| 81 |
+
background-color: #475569 !important; /* slate-600 */
|
| 82 |
+
color: white !important;
|
| 83 |
+
}
|
| 84 |
+
|
| 85 |
+
button.secondary:hover {
|
| 86 |
+
background-color: #64748b !important; /* slate-500 */
|
| 87 |
+
}
|
| 88 |
+
|
| 89 |
+
/* Tabs */
|
| 90 |
+
.tab-nav {
|
| 91 |
+
background-color: #1e293b !important; /* slate-800 */
|
| 92 |
+
border-bottom: 1px solid #334155 !important; /* slate-700 */
|
| 93 |
+
}
|
| 94 |
+
|
| 95 |
+
.tab-nav button {
|
| 96 |
+
color: #f1f5f9 !important; /* slate-100 */
|
| 97 |
}
|
| 98 |
|
| 99 |
+
.tab-nav button.selected {
|
| 100 |
+
border-bottom-color: #3b82f6 !important; /* blue-500 */
|
| 101 |
}
|
| 102 |
|
| 103 |
+
/* Status indicators */
|
| 104 |
+
.status-active {
|
| 105 |
+
color: #22c55e !important; /* green-500 */
|
| 106 |
+
font-weight: 500 !important;
|
| 107 |
+
}
|
| 108 |
+
|
| 109 |
+
.status-completed {
|
| 110 |
+
color: #94a3b8 !important; /* slate-400 */
|
| 111 |
+
}
|
| 112 |
+
|
| 113 |
+
/* Headers */
|
| 114 |
+
.dashboard-header {
|
| 115 |
+
color: #f1f5f9 !important; /* slate-100 */
|
| 116 |
+
font-size: 1.5rem !important;
|
| 117 |
+
font-weight: 600 !important;
|
| 118 |
+
margin-bottom: 1rem !important;
|
| 119 |
}
|
| 120 |
|
| 121 |
+
/* Tables */
|
| 122 |
+
table {
|
| 123 |
+
background-color: #1e293b !important; /* slate-800 */
|
| 124 |
+
color: #f1f5f9 !important; /* slate-100 */
|
| 125 |
}
|
| 126 |
|
| 127 |
+
th, td {
|
| 128 |
+
border-color: #334155 !important; /* slate-700 */
|
|
|
|
| 129 |
}
|
| 130 |
"""
|
| 131 |
|