{ "tool": "NCBI AMRFinderPlus", "tool_version": "4.2.7", "database_version": "2026-03-24.1", "docker_image": "staphb/ncbi-amrfinderplus:4.2.7-2026-03-24.1", "organism_option": "Escherichia", "plus_scope": true, "command_template": "amrfinder -n {genome}.fna -O Escherichia --plus -o {genome}.tsv", "built_at": "2026-07-19T01:36:52+00:00", "snapshot_file_list": "/tmp/amrfinder_snapshot_v2_20260719_033629.txt", "n_genomes": 1434, "n_features": 600, "n_plain_features": 312, "n_point_features": 176, "n_degraded_features": 112, "n_genomes_zero_hits": 0, "skipped_files": [], "hit_counts": { "method:ALLELE": 2112, "method:BLAST": 24320, "method:COMPLETE": 11, "method:EXACT": 12129, "method:FRAMESHIFT": 2, "method:INTERNAL_STOP": 149, "method:PARTIAL": 794, "method:PARTIAL_CONTIG_END": 725, "method:POINT": 3663, "subtype:ACID": 1377, "subtype:AMR": 11226, "subtype:BIOCIDE": 1740, "subtype:HEAT": 173, "subtype:METAL": 1890, "subtype:POINT": 3389, "subtype:POINT_DISRUPT": 274, "subtype:STX_TYPE": 13, "subtype:VIRULENCE": 23823, "type:AMR": 14889, "type:STRESS": 5180, "type:VIRULENCE": 23836 } }