add size of databases
Browse files
app.py
CHANGED
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@@ -126,16 +126,19 @@ def retrieval():
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selected_database = st.selectbox(
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'Select database',('Lenselink', 'Davis', 'DUD-E')
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)
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if selected_database == 'DUD-E':
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selected_database = 'DUDE'
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-
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with
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st.image('figures/multi_drugs.png', use_column_width='always') #, width=125)
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with st.spinner('Loading data...'):
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batch_size = 2048
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dataset = DrugRetrieval(os.path.join(data_path, selected_database), sequence, query_embedding)
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dataloader = DataLoader(dataset, num_workers=2, batch_size=batch_size, shuffle=False, collate_fn=collate_target)
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st.success('
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with col4:
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selected_encoder = st.selectbox(
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selected_database = st.selectbox(
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'Select database',('Lenselink', 'Davis', 'DUD-E')
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)
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l = {
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'Lenselink': 314707,
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'Davis': 30056,
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'DUDE': 1434019,
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}
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if selected_database == 'DUD-E':
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selected_database = 'DUDE'
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st.image('figures/multi_drugs.png', use_column_width='always') #, width=125)
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with st.spinner(f'Loading {l[selected_database]} drugs...'):
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batch_size = 2048
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dataset = DrugRetrieval(os.path.join(data_path, selected_database), sequence, query_embedding)
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dataloader = DataLoader(dataset, num_workers=2, batch_size=batch_size, shuffle=False, collate_fn=collate_target)
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st.success(f'{l[selected_database]} drugs loaded.')
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with col4:
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selected_encoder = st.selectbox(
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