Spaces:
Sleeping
Sleeping
File size: 40,433 Bytes
2d3e83d 7340a7b 5a3e9c7 7340a7b 9fb08f5 effc4ff 9fb08f5 effc4ff 2d3e83d dabdd8b 2d3e83d 65944da b07ba82 2d3e83d 9a3e2d8 5c4d632 9a3e2d8 25908b7 2d3e83d 9a3e2d8 2d3e83d 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 bb994fb 5d68cd0 96ba566 5d68cd0 2d3e83d 58b9079 d7fe5bf 2d3e83d bf48cea 2d3e83d 45237bd 65944da 0d6498e 65944da 5c4d632 9a3e2d8 2d3e83d 106cc62 42aaed5 45237bd e538ccc 8d48a7c e538ccc 8d48a7c e538ccc 8d48a7c e538ccc 8d48a7c e538ccc 8d48a7c e538ccc 8d48a7c 42aaed5 2d3e83d bf48cea 2d3e83d c7973e5 2d3e83d 5c4d632 2d3e83d cd41a42 2d3e83d 1d4e35d 2d3e83d 1d4e35d 2d3e83d f965436 2d3e83d f965436 2d3e83d 4b568ea 8e1e387 b841603 af5ea68 9e47cba 07fc95c 2d3e83d 2a05cb2 9fb08f5 3a4ea9a 9fb08f5 effc4ff 9fb08f5 effc4ff 9fb08f5 effc4ff 9fb08f5 effc4ff 9fb08f5 d9443a6 effc4ff 9fb08f5 effc4ff d9443a6 effc4ff d9443a6 effc4ff 9fb08f5 d9443a6 effc4ff 9fb08f5 effc4ff 9fb08f5 d9443a6 effc4ff 05d6577 9fb08f5 65944da 9fb08f5 d9443a6 9fb08f5 d9443a6 9fb08f5 d9443a6 9fb08f5 effc4ff 9fb08f5 d9443a6 9fb08f5 effc4ff 9a3e2d8 52d0769 9a3e2d8 a946b17 9a3e2d8 c796a61 9a3e2d8 d40acd8 9a3e2d8 c796a61 9a3e2d8 c796a61 9a3e2d8 c796a61 9a3e2d8 c796a61 9a3e2d8 e495b8f 5f81ae2 e495b8f dabdd8b 9de5f59 2d3e83d e495b8f 6e461b0 e495b8f ce8b1cd e495b8f ce8b1cd e495b8f ce8b1cd 31fc038 05d6577 abaabdf c4760a2 abaabdf 31fc038 e495b8f df15768 ce8b1cd e495b8f ce8b1cd e495b8f e5b248c e495b8f 5f81ae2 e495b8f 58b9079 e495b8f d22323b 3a4ea9a d22323b ce8b1cd ff1b425 d22323b 3a4ea9a d22323b 6e461b0 d22323b e495b8f ce8b1cd 2a05cb2 ce8b1cd e495b8f ce8b1cd e495b8f ce8b1cd e495b8f ce8b1cd e495b8f ce8b1cd 2a05cb2 ce8b1cd e495b8f ce8b1cd 2a05cb2 ce8b1cd e495b8f ce8b1cd e495b8f ce8b1cd e495b8f 3111cc8 2d3e83d 9a3e2d8 2d3e83d 9a3e2d8 2d3e83d 7340a7b 2d3e83d e572ef0 2d3e83d a899671 2d3e83d c796a61 2d3e83d ae55a56 2d3e83d ae55a56 2d3e83d fe487f6 2d3e83d 4b568ea 2d3e83d 88c6c5e 2d3e83d 5d68cd0 2d3e83d ae55a56 2d3e83d 3111cc8 0776730 3111cc8 2d3e83d 807eec0 2d3e83d d288dbf 2d3e83d |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 |
import json
import os
from dataclasses import dataclass, field
from typing import List, Optional, Dict
from PIL import Image
import streamlit as st
from markdown import markdown
st.set_page_config(layout="wide", page_title="Therapy Session Annotation", initial_sidebar_state="collapsed")
import re, textwrap, html as py_html
from pathlib import Path
from streamlit.components.v1 import html as st_html
import numpy as np
import pandas as pd
from fsspec.implementations.local import LocalFileSystem
from huggingface_hub import HfFileSystem
import streamlit.components.v1 as components
@dataclass
class Field:
type: str
title: str
name: str = None
mandatory: bool = True
# if value of field is in the list of those values, makes following siblings mandatory
following_mandatory_values: list = False
skip_mandatory: bool = False
help: Optional[str] = None
children: Optional[List['Field']] = None
other_params: Optional[Dict[str, object]] = field(default_factory=lambda: {})
# Function to get user ID from URL
def get_param_from_url(param):
user_id = st.query_params.get(param, "")
return user_id
########################################################################################
# 'local' or 'hf'. hf is for Hugging Face file system but has limits on the number of access per hour
filesystem = 'hf'
input_repo_path = 'datasets/emvecchi/therapy_annotation'
output_repo_path = 'datasets/emvecchi/therapy_annotation/pilot'
to_annotate_file_name = 'to_annotate.csv' # CSV file to annotate
COLS_TO_SAVE = ['dialogue_id','dialogue_name','generatedPatient']
agreement_labels = ['strongly disagree', 'disagree', 'neither agree no disagree', 'agree', 'strongly agree']
mentioned_y_n = ['yes, explicitly', 'yes, implicitly', 'no', 'not sure', 'other']
degree_labels = ['Not at all', 'Slightly', 'Moderately', 'Very much', 'Extremely']
quality_labels = ['very poor', 'poor', 'acceptable', 'good', 'very good']
priority_labels = ['not a priority', 'low priority', 'neutral', 'moderate priority', 'high priority']
yes_no_labels = ['no','yes']
yes_no_other_labels = ['no','yes','other']
default_labels = agreement_labels
MAX_RUPTURE_MARKERS = 8 # 1 initial + up to 7 extra
RUPTURE_LINE_INPUT_TYPE = "number" # or "text" if your line numbers aren't pure ints
rupture_choices = ["",
"Denial",
"Minimal response",
"Abstract communication",
"Avoidant storytelling and/or topic-shifting",
"Deferential / appeasing behavior",
"Content/affect split (i.e. talking content vs emotional tone mismatch)",
"Self-criticism and/or hopelessness",
"Complaints or concerns about the therapist",
"Patient rejects therapist intervention",
"Complaints/concerns about the activities of therapy",
"Complaints/concerns about the parameters of therapy (e.g. scheduling, rules)",
"Complaints/concerns about progress in therapy",
"Patient defends self against therapist",
"Efforts to control or pressure the therapist",
"Other"]
default_choices = rupture_choices
consent_text = '''
## Consent Form
You will be asked to take part in a research study. Before you decide to take part in this study, it is important that you understand why the study is being done and what it involves. Please read the following information carefully.
________________________________________________________________________________________
Project title: [...]\\
Researchers: [...]\\
Institute: Institute for Machine Speech Processing (IMS)\\
University: University of Stuttgart\\
Contact: eva-maria.vecchi@ims.uni-stuttgart.de
_________________________________________________________________________________________
### Description of the research study
In this study, we investigate [...]
The intended use of the results of this study includes [...]
**Time required:** Your participation will take up to an estimated [...] hours. The time required may vary on an individual basis.
**Risks and benefits:** The risks to your participation in this online survey are those associated with basic computer tasks, including boredom, fatigue, mild stress, or breach of confidentiality. Some of the topics discussed in the online posts to be annotated may include violence, suicide or rape. The only benefit to you is the learning experience from participating in a research study. The benefit to society is the contribution to scientific knowledge
**Compensation:** You will be compensated for participating in this study. If you are interested, we will also be more than happy to share more information about our research with you.
**Voluntary participation:** Your participation in this study is voluntary. It is your decision whether or not to participate in this study. If you decide to participate in this study, you will be asked to confirm this consent form ("I agree."). Even after signing the consent form, you can withdraw from participation at any time and without giving any reason. Partial data will not be analysed.
**Confidentiality:** Your responses to this experiment will be anonymous. Please do not share any
Information that can be used to identify you. The researcher(s) will make every effort to maintain your confidentiality.
**Contact:** If at any time you have questions about this study or would like to report any adverse effects due to this study, please contact the researcher(s).
**Trigger Warning:** [...]
### Consent:
Please indicate, in the box below, that you are at least 18 years old, have read and understood this consent form, are comfortable using the English and German languages to complete the survey, and you agree to participate in this online research survey.
- *I am age 18 or older.*
- *I have read this consent form or had it read to me.*
- *I am comfortable using the English language to participate in this survey.*
- *I agree to participate in this research and I want to continue with the survey.*
'''
fields: List[Field] = [
Field(name="patient", type="input_col", title=" "),
Field(type="expander", title="**Session Transcription:** *(expand)*", children=[
Field(name="dialogue_name", type="input_col", title=""),
]),
Field(type="container", title="##### Session-/Patient-Specific Properties", children=[
Field(name="diagnosis", type="likert_radio",
title="Is there mention of a specific [possible] clinical diagnosis?", other_params={'labels': mentioned_y_n}, mandatory=True),
Field(name="stressor", type="likert_radio",
title="Does the patient mention sources of psychological pressure that contribute to the development or worsening of the patient's state?",
other_params={'labels': mentioned_y_n}, mandatory=True),
]),
Field(type="container", title="#### Rupture Markers", children=[
Field(type="expander", title="**Overview of rupture markers** *(expand)*", children=[
Field(type="markdown", title="", other_params={"path": "rupture_marker_overview.md"}),
]),
Field(name="rupture_marker", type="rupture_markers",
title="Select rupture markers noted in the session, include line numbers where rupture is found.", mandatory=False),
]),
Field(type="container", title="#### True-To-Patient-Prompt Features", children=[
Field(type="expander", title="**Patient Role Description:** *(expand)*", children=[
Field(name="role_name", type="input_col", title=""),
]),
Field(name="emotion", type="likert_radio",
title="To what extent did the simulated patient’s emotional expressions (e.g., frustration, sadness, guardedness) align with those expected for this role?",
other_params={"labels": degree_labels}, mandatory=True),
Field(name="conversationalStyle", type="likert_radio",
title="How well did the patient consistently exhibit the conversational style they were assigned, and did this feel realistic compared to actual patients with this style?",
other_params={"labels": degree_labels}, mandatory=True),
Field(name="maladaptive", type="likert_radio",
title="How accurately did the patient’s statements reflect distorted thoughts consistent with the underlying cognitive model?",
other_params={"labels": degree_labels}, mandatory=True),
Field(name="fidelity", type="likert_radio",
title="Overall, how closely did the patient reflect real patients in terms of realism, variability, and challenge during the session?",
other_params={"labels": degree_labels}, mandatory=True),
]),
Field(type="container", title="#### Interpersonal therapeutic competence", children=[
Field(name="v_expressiveness", type="likert_radio",
title="**Verbal expressiveness.** How fluent, clear, and confident is the person’s verbal communication (regardless of content)?",
other_params={'labels': ['Very unclear','Unclear','Average','Clear','Very Clear']},
mandatory=True, following_mandatory_values=[1]),
Field(name="hope", type="likert_radio",
title="**Hope and positive expectation.** To what extent does the person convey optimism, confidence, and positive expectations for the patient’s future or therapy?",
other_params={'labels': ['Hopeless','Discouraging','Neutral','Hopeful','Very hopeful']},
mandatory=True, following_mandatory_values=[1]),
Field(name="credible", type="likert_radio",
title="**Ability to be credible and convincing.** How credible and convincing is the person when presenting a new perspective or interpretation to the patient?",
other_params={'labels': ['Unconvincing','Weak','Neutral','Convincing','Very convincing']},
mandatory=True, following_mandatory_values=[1]),
Field(name="e_expressiveness", type="likert_radio",
title="**Emotional expressiveness.** How well does the person’s voice and manner convey emotional engagement and intensity (without being hostile)?",
other_params={'labels': ['Flat','Low','Moderate','Expressive','Very expressive']},
mandatory=True, following_mandatory_values=[1]),
Field(name="acceptance", type="likert_radio",
title="**Acceptance, understanding, and warmth.** To what extent does the person show care, acceptance, and warmth toward the patient (without judgment)?",
other_params={'labels': ['Cold','Limited','Neutral','Warm','Very warm']},
mandatory=True, following_mandatory_values=[1]),
Field(name="empathy", type="likert_radio",
title="**Empathy.** How well does the person demonstrate an accurate, deeper understanding of the patient’s subjective experience?",
other_params={'labels': ['Distorted','Superficial','Partial','Accurate','Deep']},
mandatory=True, following_mandatory_values=[1]),
Field(name="alliance", type="likert_radio",
title="**Ability to form alliances.** How effectively does the person create a collaborative “working together” atmosphere with the patient?",
other_params={'labels': ['Blocking','Weak','Moderate','Cooperative','Strong']},
mandatory=True, following_mandatory_values=[1]),
Field(name="tensions", type="likert_radio",
title="**Addressing tensions and crises.** How effectively does the person acknowledge and work through interpersonal tensions or crises in the interaction?",
other_params={'labels': ['Avoiding','Poor','Partial','Productive','Resolving']},
mandatory=True, following_mandatory_values=[1]),
]),
Field(type="container", title="##### Additional Comments *(optional)*", children=[
Field(name="other_comments", type="text", title="Please provide any additional details or information:", mandatory=False),
]),
]
url_conditional_fields = [
Field(name="skip", type="skip_checkbox",
title="*I am uncomfortable annotating this text and voluntarily skip this instance*", mandatory=False)
]
INPUT_FIELD_DEFAULT_VALUES = {'slider': 0,
'text': '',
'textarea': '',
'checkbox': False,
'radio': None,
'select_slider': 0,
'multiselect': [],
'likert_radio': None,
'y_n_radio': None}
SHOW_HELP_ICON = False
SHOW_VALIDATION_ERROR_MESSAGE = True
########################################################################################
if filesystem == 'hf':
HF_TOKEN = os.environ.get("HF_TOKEN_WRITE")
print("is none?", HF_TOKEN is None)
hf_fs = HfFileSystem(token=HF_TOKEN)
else:
hf_fs = LocalFileSystem()
def get_start_index():
if hf_fs.exists(output_repo_path + '/' + get_base_path()):
files = hf_fs.ls(output_repo_path + '/' + get_base_path())
return len(files) #-1
else:
return -2
def read_data():
with hf_fs.open(input_repo_path + '/' + to_annotate_file_name) as f:
return pd.read_csv(f)
def read_saved_data():
_path = get_path()
if hf_fs.exists(output_repo_path + '/' + _path):
with hf_fs.open(output_repo_path + '/' + _path) as f:
try:
return json.load(f)
except json.JSONDecodeError as e:
print(e)
return None
# Write a remote file
def save_data(data):
if not hf_fs.exists(f"{output_repo_path}/{get_base_path()}"):
hf_fs.mkdir(f"{output_repo_path}/{get_base_path()}")
with hf_fs.open(f"{output_repo_path}/{get_path()}", "w") as f:
f.write(json.dumps(data))
def get_base_path():
return f"{st.session_state.user_id}"
def get_path():
return f"{get_base_path()}/{st.session_state.current_index}.json"
def display_dialogue(hf_path: str):
with hf_fs.open(hf_path, "rb") as f:
txt = f.read().decode("utf-8")
txt = load_text(hf_path)
st.markdown(txt,
unsafe_allow_html=True)
def display_image(image_path):
with hf_fs.open(image_path) as f:
img = Image.open(f)
st.image(img, caption='', use_column_width=True)
def _ensure_key(key: str, default):
if key not in st.session_state:
st.session_state[key] = default
return st.session_state[key]
SPEAKER_RE = re.compile(r'^\s*\*\*(T|P):\*\*\s*(.*)$')
def read_md(path: str) -> str:
"""Read .md file from HF dataset or local disk."""
if filesystem == 'hf':
with hf_fs.open(path, "rb") as f:
return f.read().decode("utf-8")
else:
# local path
return Path(path).read_text(encoding="utf-8")
def wrap_para(text: str, width: int) -> list[str]:
if not text.strip():
return [""]
return textwrap.wrap(
text.strip().replace("\u00A0", " "),
width=width,
break_long_words=False,
break_on_hyphens=False,
drop_whitespace=True,
replace_whitespace=True,
) or [""]
def md_dialogue_to_visual_lines(md_text: str, width: int) -> list[str]:
"""Return a list of wrapped visual lines with <strong>T:/P:</strong> on first line."""
md_text = md_text.replace("\r\n", "\n").replace("\r", "\n").strip("\n")
paragraphs = re.split(r"\n\s*\n", md_text)
out = []
for p in paragraphs:
p = p.strip()
if not p:
out.append("")
continue
m = SPEAKER_RE.match(p)
if m:
speaker, content = m.group(1), m.group(2)
wrapped = wrap_para(content, width)
out.append(f"<strong>{speaker}:</strong> {py_html.escape(wrapped[0])}".rstrip())
for w in wrapped[1:]:
out.append(py_html.escape(w))
else:
for w in wrap_para(p, width):
out.append(py_html.escape(w))
out.append("") # blank between paragraphs
if out and out[-1] == "": out.pop()
return out
def render_markdown_simple(md_path, height_px=520):
md = read_md(md_path)
st.markdown(
f"<div style='max-height:{height_px}px; overflow:auto'>{markdown(md, extensions=['extra','codehilite'])}</div>",
unsafe_allow_html=True
)
def render_dialogue(md_path: str,
width_chars: int = 100,
height_px: int = 520,
font_family: str = "system-ui, -apple-system, 'Segoe UI', Roboto, Helvetica, Arial, 'Noto Sans', sans-serif",
font_size: str = "1.05rem",
show_border: bool = False):
"""Render the .md dialogue with line numbers inside an iframe to avoid Streamlit CSS quirks."""
text = read_md(md_path)
lines = md_dialogue_to_visual_lines(text, width_chars)
border_css = "1px solid #e6e6e6" if show_border else "none"
radius_css = ".6rem" if show_border else "0"
padding_css = ".8rem 1rem" if show_border else "0"
# Build stable HTML (table keeps gutter aligned)
rows = "\n".join(
f"<tr><td class='num'>{i}</td><td class='txt'>{ln or ' '}</td></tr>"
for i, ln in enumerate(lines, 1)
)
html_doc = f"""
<!doctype html>
<meta charset="utf-8">
<style>
:root {{
--font-text: {font_family};
--font-size: {font_size};
}}
html, body {{
margin:0; padding:0; background:transparent;
font-family: var(--font-text); font-size: var(--font-size);
-webkit-font-smoothing: antialiased; -moz-osx-font-smoothing: grayscale;
font-synthesis: none; /* avoid auto fake-bold */
}}
.root {{
border:{border_css}; border-radius:{radius_css}; padding:{padding_css};
height:{height_px}px; overflow:auto; background:transparent;
line-height:1.5;
}}
table {{ border-collapse:collapse; table-layout:fixed; width:max-content; max-width:100%; }}
td {{ padding:0; vertical-align:top; }}
.num {{
width:4ch; padding-right:1ch; text-align:right; color:rgba(0,0,0,.55);
user-select:none; font-variant-numeric: tabular-nums;
font-family: ui-monospace, SFMono-Regular, Menlo, Consolas, 'Liberation Mono', monospace;
}}
.txt {{
white-space: pre-wrap; word-break: break-word; max-width:{width_chars}ch;
}}
strong {{ font-weight:700; }}
</style>
<div class="root">
<table>
{rows}
</table>
</div>
"""
# iframe height = inner height; no external scrollbars flashing
st_html(html_doc, height=height_px + (16 if show_border else 0), scrolling=False)
def render_rupture_markers_widget(index: int, choices: list[str]):
"""Dynamic list of (rupture_marker_i, line_a_i, line_b_i) with Add/Remove.
Works inside a st.form by using form_submit_button instead of callbacks."""
count_key = f"rupture_count_{index}"
if count_key not in st.session_state:
st.session_state[count_key] = 1
count = st.session_state[count_key]
st.markdown("**What rupture markers are found?** *(one per row; max 8)*")
for i in range(1, count + 1):
col1, col2, col3 = st.columns([3, 1, 1])
marker_key = f"rupture_marker_{i}_{index}"
a_key = f"rupture_marker_{i}_line_a_{index}"
b_key = f"rupture_marker_{i}_line_b_{index}"
with col1:
current = st.session_state.get(marker_key, "")
if marker_key in st.session_state:
st.selectbox(f"Rupture marker {i}", options=choices, key=marker_key)
else:
default_idx = choices.index(current) if current in choices else 0
st.selectbox(f"Rupture marker {i}", options=choices, key=marker_key, index=default_idx)
# st.selectbox(
# f"Rupture marker {i}", options=choices, key=marker_key,
# index=(choices.index(st.session_state.get(marker_key))
# if st.session_state.get(marker_key) in choices else 0)
# if st.session_state.get(marker_key) is not None else 0
# )
with col2:
if RUPTURE_LINE_INPUT_TYPE == "number":
st.number_input("Lines: from", min_value=0, step=1, key=a_key)
else:
st.text_input("Lines: from", key=a_key, value=st.session_state.get(a_key, ""))
with col3:
if RUPTURE_LINE_INPUT_TYPE == "number":
st.number_input("Lines: to", min_value=0, step=1, key=b_key)
else:
st.text_input("Lines: to", key=b_key, value=st.session_state.get(b_key, ""))
st.markdown("---")
a_col, b_col = st.columns([1, 1])
with a_col:
if st.button("➕ Add another rupture marker", disabled=(count >= MAX_RUPTURE_MARKERS)):
st.session_state[count_key] = min(MAX_RUPTURE_MARKERS, count + 1)
st.rerun()
with b_col:
if st.button("➖ Remove last", disabled=(count <= 1)):
st.session_state[count_key] = max(1, count - 1)
st.rerun()
st.caption(f"{st.session_state[count_key]}/{MAX_RUPTURE_MARKERS} markers")
def _get_value_for_field(f: Field, index: int):
"""Return the session value for input fields or None."""
if f.type in INPUT_FIELD_DEFAULT_VALUES:
key = f.name + str(index)
return st.session_state.get(key, INPUT_FIELD_DEFAULT_VALUES[f.type])
return None
def _is_default_value(f: Field, val):
"""Check if current value equals the default for this widget type."""
return val == INPUT_FIELD_DEFAULT_VALUES.get(f.type)
def prime_rupture_markers_from_saved(index: int, data_collected: dict | None):
"""
Copy saved JSON values (rupture_marker_1, *_line_a, *_line_b) into
st.session_state keys used by the widget (…_{index}), and set the count.
Runs once per index to avoid clobbering user edits on reruns.
"""
if not data_collected:
return
primed_flag = f"rupture_primed_{index}"
if st.session_state.get(primed_flag):
return # already restored for this page
slots = []
for i in range(1, MAX_RUPTURE_MARKERS + 1):
m = data_collected.get(f"rupture_marker_{i}")
a = data_collected.get(f"rupture_marker_{i}_line_a")
b = data_collected.get(f"rupture_marker_{i}_line_b")
if any(v is not None for v in (m, a, b)):
# widget's selectbox uses "" for "no selection"
slots.append(((m or ""), a, b))
if not slots:
return
# set widget count (at least 1, capped to MAX)
count_key = f"rupture_count_{index}"
st.session_state[count_key] = min(MAX_RUPTURE_MARKERS, max(1, len(slots)))
for i, (m, a, b) in enumerate(slots, start=1):
st.session_state[f"rupture_marker_{i}_{index}"] = m if m in rupture_choices else (m or "")
st.session_state[f"rupture_marker_{i}_line_a_{index}"] = a
st.session_state[f"rupture_marker_{i}_line_b_{index}"] = b
st.session_state[primed_flag] = True
def validate_current_page(fields: List[Field], index: int) -> bool:
"""
Walk the field tree and verify mandatory inputs are filled.
Honors `following_mandatory_values`: if a field's value is in that list,
subsequent siblings become mandatory.
"""
ok = True
def walk(nodes: List[Field], following_required: bool = False):
nonlocal ok
# local flag that can be turned on by a node for its following siblings
req_for_following = following_required
for f in nodes:
if f.children:
# containers/expanders: recurse; pass the current rule downward
walk(f.children, req_for_following)
continue
if f.type in INPUT_FIELD_DEFAULT_VALUES:
val = _get_value_for_field(f, index)
# decide if THIS field is required
required = bool(f.mandatory or req_for_following)
# if required and default → error
if required and _is_default_value(f, val):
ok = False
# update the "following required" rule for siblings
if f.following_mandatory_values:
try:
if val in f.following_mandatory_values:
req_for_following = True
except Exception:
pass
# structural types (markdown/input_col/etc.) don’t affect validation
walk(fields, False)
if not ok:
st.error("Please fill in all mandatory fields.")
return ok
#################################### Streamlit App ####################################
# Function to navigate rows
def navigate(index_change):
st.session_state.current_index += index_change
# only works consistently if done before rerun
js = '''
<script>
setTimeout(function() {
var titleElement = window.parent.document.querySelector("h1");
if (titleElement) {
titleElement.scrollIntoView({behavior: "smooth", block: "start"});
}
}, 100);
</script>
'''
st.components.v1.html(js, height=0)
# https://discuss.streamlit.io/t/click-twice-on-button-for-changing-state/45633/2
# disable text input enter to submit
# https://discuss.streamlit.io/t/text-input-how-to-disable-press-enter-to-apply/14457/6
components.html(
"""
<script>
const inputs = window.parent.document.querySelectorAll('input');
inputs.forEach(input => {
input.addEventListener('keydown', function(event) {
if (event.key === 'Enter') {
event.preventDefault();
}
});
});
</script>
""",
height=0
)
st.rerun()
def show_field(f: Field, index: int, data_collected):
if f.type not in INPUT_FIELD_DEFAULT_VALUES.keys():
st.session_state.following_mandatory = False
match f.type:
case 'input_col':
value = (
st.session_state.data.iloc[index][f.name]
if f.name and f.name in st.session_state.data.columns
else None
)
if f.name == 'image_name' and value:
display_image(os.path.join(input_repo_path, 'images', value))
elif f.name == 'dialogue_name' and value:
render_dialogue(
os.path.join(input_repo_path, 'dialogues', value),
width_chars=115, height_px=520, show_border=False
)
elif f.name == 'role_name' and value:
render_markdown_simple(os.path.join(input_repo_path, 'role_descriptions', value), height_px=520)
#,
#width_chars=115, height_px=520, show_border=False
#)
elif f.name == 'patient' and value:
st.markdown(f"#### Patient: {value}")
elif value not in (None, np.nan, ""):
if f.title:
st.write(f.title)
st.write(value)
case 'markdown':
path = f.other_params.get("path") if f.other_params else None
if path:
content = load_text(os.path.join(input_repo_path, path))
st.markdown(content, unsafe_allow_html=True)
else:
st.markdown(f.title)
case 'expander':
with (st.expander(f.title) if f.type == 'expander' else st.container(border=True)):
for child in f.children:
show_field(child, index, data_collected)
case 'container':
with st.container(border=True):
st.markdown(f.title)
for child in (f.children or []):
show_field(child, index, data_collected)
case 'skip_checkbox':
st.checkbox(f.title, key=f.name, value=False)
case 'rupture_markers':
prime_rupture_markers_from_saved(index, data_collected)
render_rupture_markers_widget(index, rupture_choices)
return
else:
key = f.name + str(index)
# track the logical field name once per page; prep_and_save_data relies on this
st.session_state.data_inputs_keys.append(f.name)
default_val = (
data_collected.get(f.name, INPUT_FIELD_DEFAULT_VALUES[f.type])
if data_collected else INPUT_FIELD_DEFAULT_VALUES[f.type]
)
value = _ensure_key(key, default_val)
#value = st.session_state[key] if key in st.session_state else \
# (data_collected[f.name] if data_collected else INPUT_FIELD_DEFAULT_VALUES[f.type])
if not SHOW_HELP_ICON:
f.title = f'**{f.title}**\n\n{f.help}' if f.help else f.title
validation_error = False
if st.session_state.form_displayed == st.session_state.current_index:
if st.session_state.following_mandatory and f.skip_mandatory:
st.session_state.following_mandatory = False
if f.following_mandatory_values and st.session_state[key] in f.following_mandatory_values:
st.session_state.following_mandatory = True
if f.mandatory or st.session_state.following_mandatory:
if value == INPUT_FIELD_DEFAULT_VALUES[f.type]:
#if st.session_state[key] == INPUT_FIELD_DEFAULT_VALUES[f.type]:
st.session_state.valid = False
validation_error = True
elif f.following_mandatory_values and st.session_state[key] in f.following_mandatory_values:
st.session_state.following_mandatory = True
if f.mandatory or st.session_state.following_mandatory:
f.title += " :red[* required!]" if (validation_error and not SHOW_VALIDATION_ERROR_MESSAGE) else' :red[*]'
f.help = None
value = st.session_state[key] if key in st.session_state else \
(data_collected[f.name] if data_collected else INPUT_FIELD_DEFAULT_VALUES[f.type])
match f.type:
case 'checkbox':
st.checkbox(f.title, key=key, value=value, help=f.help)
case 'radio':
labels = (f.other_params.get('labels')
if f.other_params and f.other_params.get('labels')
else default_labels)
st.radio(
f.title,
options=range(len(labels)),
format_func=lambda x: labels[x],
key=key,
index=value,
help=f.help,
horizontal=False
)
case 'slider':
st.slider(f.title, min_value=0, max_value=6, step=1, key=key,
value=value, help=f.help)
case 'select_slider':
labels = (f.other_params.get('labels')
if f.other_params and f.other_params.get('labels')
else default_labels)
st.select_slider(
f.title,
options=[0, 20, 40, 60, 80, 100],
format_func=lambda x: labels[x // 20],
key=key,
value=value,
help=f.help
)
case 'multiselect':
choices = (f.other_params.get('choices')
if f.other_params and f.other_params.get('choices')
else default_choices)
st.multiselect(
f.title,
options=choices,
format_func=lambda x: x,
key=key,
default=value,
max_selections=3,
help=f.help
)
case 'likert_radio':
labels = (f.other_params.get('labels')
if f.other_params and f.other_params.get('labels')
else default_labels)
st.radio(
f.title,
options=[0, 1, 2, 3, 4],
format_func=lambda x: labels[x],
key=key,
index=value,
help=f.help,
horizontal=True
)
case 'y_n_radio':
labels = (f.other_params.get('labels')
if f.other_params and f.other_params.get('labels')
else yes_no_labels)
st.radio(
f.title,
options=[0, 1],
format_func=lambda x: labels[x],
key=key,
index=value,
help=f.help,
horizontal=True
)
case 'text':
st.text_input(f.title, key=key, value=(value if value is not None else ""),
max_chars=None, help=f.help)
case 'textarea':
st.text_area(f.title, key=key, value=(value if value is not None else ""),
max_chars=None, help=f.help)
def show_fields(fields: List[Field]):
index = st.session_state.current_index
data_collected = read_saved_data()
st.session_state.data_inputs_keys = [] # rebuilt each render
st.session_state.following_mandatory = False
for field in fields:
show_field(field, index, data_collected)
# mark that the page has been rendered at least once (if you still use this elsewhere)
st.session_state.form_displayed = st.session_state.current_index
def prep_and_save_data(index, skip_sample):
payload = {
'user_id': st.session_state.user_id,
'index': st.session_state.current_index,
**(st.session_state.data.iloc[index][COLS_TO_SAVE].to_dict() if 0 <= index < len(st.session_state.data) else {}),
**{k: st.session_state[k + str(index)] for k in st.session_state.data_inputs_keys},
'skip': skip_sample
}
# normalize rupture markers -> always write 8 slots
count_key = f"rupture_count_{index}"
count = st.session_state.get(count_key, 1)
for i in range(1, MAX_RUPTURE_MARKERS + 1):
m_key = f"rupture_marker_{i}_{index}"
a_key = f"rupture_marker_{i}_line_a_{index}"
b_key = f"rupture_marker_{i}_line_b_{index}"
# export names WITHOUT the trailing _{index}, so your JSON uses a stable schema:
out_m = f"rupture_marker_{i}"
out_a = f"rupture_marker_{i}_line_a"
out_b = f"rupture_marker_{i}_line_b"
if i <= count:
marker_val = st.session_state.get(m_key)
line_a_val = st.session_state.get(a_key)
line_b_val = st.session_state.get(b_key)
# Basic sanity: if numbers, coerce order (optional)
if RUPTURE_LINE_INPUT_TYPE == "number":
try:
if line_a_val is not None and line_b_val is not None and line_a_val > line_b_val:
line_a_val, line_b_val = line_b_val, line_a_val
except Exception:
pass
payload[out_m] = marker_val if marker_val not in ("", None) else None
payload[out_a] = line_a_val if line_a_val not in ("", None) else None
payload[out_b] = line_b_val if line_b_val not in ("", None) else None
else:
payload[out_m] = None
payload[out_a] = None
payload[out_b] = None
save_data(payload)
#st.set_page_config(layout='wide')
# Title of the app
st.title("Therapy Session Annotation Task")
st.markdown(
"""<style>
div[data-testid="stMarkdownContainer"] > p {
font-size: 1rem;
}
section.main > div {max-width:80rem}
</style>
""", unsafe_allow_html=True)
def add_annotation_guidelines():
guidelines_text = load_text("texts/guidelines.md")
#st.write(f"username is {st.session_state.user_id}")
st.markdown(
f"<details><summary><b>Annotation Guidelines</b></summary><div>{guidelines_text}</div></details><br>",
unsafe_allow_html=True)
if 'unacceptable_response' in st.session_state and st.session_state.unacceptable_response:
#error_message = "You are not eligible for this study.<br><br>"
error_message = "<br>"
if st.session_state.current_index >= -5:
error_message += (
"Thank you for your time! You will receive a small compensation for your contribution up to now. <br><br>"
f'Please return to the study and copy/paste this code: <b>{failed_sanity_check_code}</b>, or '
f'<a href="https://app.prolific.com/submissions/complete?cfc={failed_sanity_check_code}">Click Here</a>'
)
# Display the error message using custom HTML
st.markdown(
f"""
<div style="background-color: #f8d7da; color: #721c24; padding: 10px; border-radius: 5px; border: 1px solid #f5c6cb;">
<h4>Error: You are not eligible for this study.</h4> {error_message}
</div>
""",
unsafe_allow_html=True
)
st.stop()
# Load the data to annotate
if 'data' not in st.session_state:
st.session_state.data = read_data()
# user id
user_id_from_url = get_param_from_url("user_id")
if user_id_from_url and not st.session_state.get("user_id"):
st.session_state.user_id = user_id_from_url
# current index
if 'current_index' not in st.session_state:
start_index = get_start_index()
if start_index < len(st.session_state.data)-1:
st.session_state.current_index = start_index
else:
st.session_state.current_index = start_index+1
st.session_state.form_displayed = -2
if get_param_from_url('show_extra_fields'):
fields += url_conditional_fields
else:
fields += url_conditional_fields
def add_validated_submit(fields, message):
st.session_state.form_displayed = st.session_state.current_index
if st.form_submit_button("Submit"):
if all(not x for x in fields):
st.error(message)
else:
navigate(1)
def add_checked_submit():
check = st.checkbox('I agree', key='consent')
add_validated_submit([check], "Please agree to give your consent to proceed")
def load_text(path: str) -> str:
if filesystem == 'hf':
with hf_fs.open(path, "rb") as f:
return f.read().decode("utf-8")
else:
with open(path, "r", encoding="utf-8") as f:
return f.read()
if st.session_state.current_index == -2:
with st.form("data_form"):
st.markdown(consent_text)
add_checked_submit()
elif st.session_state.current_index == -1:
if st.session_state.get('user_id'):
navigate(1)
else:
with st.form("user_id_form"):
st.session_state.user_id = st.text_input("User ID", value="")
add_validated_submit([st.session_state.user_id], "Please enter a valid user ID")
elif st.session_state.current_index < len(st.session_state.data):
show_fields(fields)
# Action buttons
c1, c2, c3 = st.columns([1,1,6])
with c1:
if st.button("Submit"):
if validate_current_page(fields, st.session_state.current_index):
with st.spinner("saving"):
prep_and_save_data(st.session_state.current_index, ('skip' in st.session_state and st.session_state['skip']))
st.success("Saved!")
navigate(1)
elif st.session_state.current_index == len(st.session_state.data):
st.write(f"**Thank you for taking part in this study!** \n ")
if st.button("Previous"):
navigate(-2)
# Navigation buttons
if 0 < st.session_state.current_index < len(st.session_state.data):
if st.button("Previous"):
navigate(-1)
if 0 <= st.session_state.current_index < len(st.session_state.data):
st.write(f"Page {st.session_state.current_index + 1} out of {len(st.session_state.data)}")
st.markdown(
"""<style>
div[data-testid="InputInstructions"] {
visibility: hidden;
}
</style>""", unsafe_allow_html=True
)
|