Spaces:
Runtime error
Runtime error
Create app.py
Browse files
app.py
ADDED
|
@@ -0,0 +1,99 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
|
| 2 |
+
import subprocess
|
| 3 |
+
import sys
|
| 4 |
+
|
| 5 |
+
# β
Function to install missing packages efficiently
|
| 6 |
+
def install(package):
|
| 7 |
+
try:
|
| 8 |
+
__import__(package.split("==")[0]) # Try to import package before installing
|
| 9 |
+
except ImportError:
|
| 10 |
+
subprocess.run([sys.executable, "-m", "pip", "install", package])
|
| 11 |
+
|
| 12 |
+
# β
List of dependencies to install
|
| 13 |
+
dependencies = [
|
| 14 |
+
"torch>=2.0.0",
|
| 15 |
+
"torchvision>=0.15.0",
|
| 16 |
+
"transformers",
|
| 17 |
+
"gradio",
|
| 18 |
+
"pillow",
|
| 19 |
+
"pandas",
|
| 20 |
+
"opencv-python-headless",
|
| 21 |
+
"scikit-learn==1.3.0"
|
| 22 |
+
]
|
| 23 |
+
|
| 24 |
+
# β
Install dependencies
|
| 25 |
+
for package in dependencies:
|
| 26 |
+
install(package)
|
| 27 |
+
import subprocess
|
| 28 |
+
import sys
|
| 29 |
+
|
| 30 |
+
# β
Function to install missing packages
|
| 31 |
+
def install(package):
|
| 32 |
+
subprocess.check_call([sys.executable, "-m", "pip", "install", package])
|
| 33 |
+
|
| 34 |
+
# β
Ensure required libraries are installed
|
| 35 |
+
for package in ["torch", "torchvision", "transformers", "gradio", "pillow", "pandas", "opencv-python", "scikit-learn"]:
|
| 36 |
+
try:
|
| 37 |
+
__import__(package)
|
| 38 |
+
except ImportError:
|
| 39 |
+
install(package)
|
| 40 |
+
|
| 41 |
+
# β
Import libraries after installation
|
| 42 |
+
import torch
|
| 43 |
+
import torch.nn as nn
|
| 44 |
+
import torchvision.transforms as transforms
|
| 45 |
+
import torchvision.models as models
|
| 46 |
+
import pandas as pd
|
| 47 |
+
from PIL import Image
|
| 48 |
+
import gradio as gr
|
| 49 |
+
from sklearn.preprocessing import LabelEncoder
|
| 50 |
+
|
| 51 |
+
# β
Load metadata
|
| 52 |
+
CSV_PATH = "HAM10000_metadata.csv"
|
| 53 |
+
DATA_PATH = "ham10000_images/"
|
| 54 |
+
|
| 55 |
+
df = pd.read_csv(CSV_PATH)
|
| 56 |
+
label_encoder = LabelEncoder()
|
| 57 |
+
df["label"] = label_encoder.fit_transform(df["dx"]) # Convert labels to numbers
|
| 58 |
+
classes = label_encoder.classes_ # Get class names
|
| 59 |
+
|
| 60 |
+
# β
Define image transformation
|
| 61 |
+
transform = transforms.Compose([
|
| 62 |
+
transforms.Resize((224, 224)),
|
| 63 |
+
transforms.ToTensor(),
|
| 64 |
+
transforms.Normalize(mean=[0.5, 0.5, 0.5], std=[0.5, 0.5, 0.5])
|
| 65 |
+
])
|
| 66 |
+
|
| 67 |
+
# β
Load a pre-trained EfficientNet model
|
| 68 |
+
model = models.efficientnet_b0(pretrained=True)
|
| 69 |
+
num_features = model.classifier[1].in_features
|
| 70 |
+
model.classifier[1] = nn.Linear(num_features, len(classes)) # Adjust for 7 classes
|
| 71 |
+
model.load_state_dict(torch.load("ham10000_model.pth", map_location=torch.device('cpu')))
|
| 72 |
+
model.eval()
|
| 73 |
+
|
| 74 |
+
# β
Function to classify skin disease
|
| 75 |
+
def classify_skin_disease(image):
|
| 76 |
+
image = Image.fromarray(image) # Convert to PIL image
|
| 77 |
+
image = transform(image).unsqueeze(0) # Apply transformations
|
| 78 |
+
|
| 79 |
+
with torch.no_grad():
|
| 80 |
+
output = model(image)
|
| 81 |
+
probabilities = torch.nn.functional.softmax(output[0], dim=0)
|
| 82 |
+
|
| 83 |
+
# Convert probabilities to dictionary
|
| 84 |
+
results = {classes[i]: f"{probabilities[i].item():.2%}" for i in range(len(classes))}
|
| 85 |
+
return results
|
| 86 |
+
|
| 87 |
+
# β
Create Gradio Interface
|
| 88 |
+
iface = gr.Interface(
|
| 89 |
+
fn=classify_skin_disease,
|
| 90 |
+
inputs=gr.Image(type="numpy"),
|
| 91 |
+
outputs=gr.Label(num_top_classes=3),
|
| 92 |
+
title="π©Ί AI Skin Disease Classifier",
|
| 93 |
+
description="π· Upload a skin lesion image and the model will classify it.",
|
| 94 |
+
examples=["example_eczema.jpg", "example_melanoma.jpg"], # Add sample images
|
| 95 |
+
)
|
| 96 |
+
|
| 97 |
+
# β
Run Gradio App
|
| 98 |
+
if __name__ == "__main__":
|
| 99 |
+
iface.launch()
|