Upload 3 files
Browse files- Dockerfile +22 -0
- main.py +372 -0
- requirements.txt +10 -0
Dockerfile
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FROM python:3.10-slim
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WORKDIR /app
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# Install system dependencies
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RUN apt-get update && apt-get install -y \
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libgl1-mesa-glx \
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libglib2.0-0 \
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&& rm -rf /var/lib/apt/lists/*
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# Copy requirements first for better caching
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COPY requirements.txt .
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RUN pip install --no-cache-dir -r requirements.txt
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# Copy model files and app
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COPY . .
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# Expose port
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EXPOSE 7860
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# Run the app
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CMD ["python", "main.py"]
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main.py
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import os
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import re
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import json
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import base64
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from io import BytesIO
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from typing import Optional, List
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from pathlib import Path
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import torch
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import numpy as np
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from PIL import Image
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from fastapi import FastAPI, File, UploadFile, Form, HTTPException
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from fastapi.responses import JSONResponse
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from fastapi.middleware.cors import CORSMiddleware
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from transformers import TrOCRProcessor, VisionEncoderDecoderModel
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# βββ Configuration ββββββββββββββββββββββββββββββββββββββββββββββββ
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MODEL_PATH = "fady-50/ocr-model" # Your Hugging Face model ID
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DEVICE = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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# βββ Load Model & Processor ββββββββββββββββββββββββββββββββββββββ
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print(f"Loading model on {DEVICE}...")
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processor = TrOCRProcessor.from_pretrained(MODEL_PATH, local_files_only=False)
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model = VisionEncoderDecoderModel.from_pretrained(MODEL_PATH, local_files_only=False)
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model.to(DEVICE)
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model.eval()
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print("Model loaded successfully!")
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# βββ FastAPI App βββββββββββββββββββββββββββββββββββββββββββββββββ
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app = FastAPI(
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title="Prescription OCR API",
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description="Extract medicine names from handwritten prescriptions using TrOCR",
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version="1.0.0"
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)
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app.add_middleware(
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CORSMiddleware,
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allow_origins=["*"],
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allow_credentials=True,
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allow_methods=["*"],
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allow_headers=["*"],
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)
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# βββ Helper Functions ββββββββββββββββββββββββββββββββββββββββββββ
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def preprocess_image(image: Image.Image) -> Image.Image:
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"""Preprocess image for TrOCR."""
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# Convert to RGB if needed
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if image.mode != "RGB":
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image = image.convert("RGB")
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# Resize to model input size (384x384 for TrOCR base)
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image = image.resize((384, 384), Image.Resampling.LANCZOS)
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return image
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def extract_text_from_image(image: Image.Image) -> str:
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"""Run OCR on image and return extracted text."""
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pixel_values = processor(images=image, return_tensors="pt").pixel_values
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pixel_values = pixel_values.to(DEVICE)
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# Generate text
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generated_ids = model.generate(
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pixel_values,
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max_length=512,
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num_beams=4,
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early_stopping=True,
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no_repeat_ngram_size=3,
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)
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generated_text = processor.batch_decode(generated_ids, skip_special_tokens=True)[0]
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return generated_text.strip()
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def extract_medicine_names(text: str) -> List[dict]:
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"""
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Extract medicine names from OCR text.
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Uses pattern matching and common medical terms.
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"""
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medicines = []
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# Common medicine name patterns (generic + brand names)
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# Pattern 1: Capitalized words that look like drug names (2-4 words)
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drug_pattern = r'(?:[A-Z][a-zA-Z]*(?:\s+[A-Z][a-zA-Z]*){0,3})'
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# Pattern 2: Words ending with common drug suffixes
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drug_suffixes = [
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'cin', 'mycin', 'micin', 'cillin', 'xacin', 'floxacin',
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'zole', 'sone', 'sone', 'nide', 'pril', 'sartan',
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'olol', 'dipine', 'zepam', 'zolam', 'pram', 'tidine',
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'tidine', 'mab', 'nib', 'vastatin', 'prastatin',
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'profen', 'coxib', 'triptan', 'platin', 'taxel'
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]
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lines = text.split('\n')
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for line_num, line in enumerate(lines, 1):
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line = line.strip()
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if not line or len(line) < 3:
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continue
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# Check for drug suffixes
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has_drug_suffix = any(suffix.lower() in line.lower() for suffix in drug_suffixes)
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# Check if line looks like a medicine (starts with capital, contains dosage, or has drug suffix)
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dosage_indicators = ['mg', 'ml', 'g', 'mcg', 'IU', 'tablet', 'capsule',
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'syrup', 'suspension', 'injection', 'drops', 'cream',
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'ointment', ' inhaler', 'spray', 'patch']
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has_dosage = any(ind.lower() in line.lower() for ind in dosage_indicators)
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# Score the line
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score = 0
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if has_drug_suffix:
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score += 3
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if has_dosage:
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score += 2
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if line[0].isupper() and len(line) > 3:
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score += 1
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if re.search(r'\d+', line): # Contains numbers (likely dosage)
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score += 1
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# Extract potential medicine name (before dosage info)
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if score >= 2:
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# Try to extract just the medicine name (before numbers or dosage)
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name_match = re.match(r'^([A-Za-z][A-Za-z\s\-]+?)(?:\s+\d|\s*(?:mg|ml|g|\%|tablet|cap))', line, re.IGNORECASE)
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+
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| 128 |
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if name_match:
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med_name = name_match.group(1).strip()
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| 130 |
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else:
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med_name = line
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# Clean up the name
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med_name = re.sub(r'[^A-Za-z\s\-]', '', med_name).strip()
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if len(med_name) > 2:
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medicines.append({
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"name": med_name,
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"full_line": line,
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"line_number": line_num,
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"confidence_score": min(score / 5.0, 1.0)
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})
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# Also try regex extraction for any missed medicines
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words = re.findall(r'[A-Z][a-zA-Z]{2,}(?:\s+[A-Z][a-zA-Z]{2,}){0,2}', text)
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existing_names = {m["name"].lower() for m in medicines}
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for word in words:
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word_clean = word.strip()
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if (word_clean.lower() not in existing_names and
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len(word_clean) > 3 and
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any(suffix.lower() in word_clean.lower() for suffix in drug_suffixes)):
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medicines.append({
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"name": word_clean,
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"full_line": word_clean,
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| 156 |
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"line_number": 0,
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"confidence_score": 0.6
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})
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# Sort by confidence
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medicines.sort(key=lambda x: x["confidence_score"], reverse=True)
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return medicines
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# βββ API Endpoints βββββββββββββββββββββββββββββββββββββββββββββββ
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| 167 |
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@app.get("/")
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def root():
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return {
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"message": "Prescription OCR API",
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"status": "running",
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"model": "TrOCR Handwritten",
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"device": str(DEVICE)
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}
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@app.get("/health")
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| 178 |
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def health_check():
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| 179 |
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return {"status": "healthy", "model_loaded": True}
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| 180 |
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| 181 |
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| 182 |
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@app.post("/predict")
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| 183 |
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async def predict(
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file: UploadFile = File(...),
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return_full_text: bool = Form(False),
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extract_medicines: bool = Form(True)
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| 187 |
+
):
|
| 188 |
+
"""
|
| 189 |
+
Upload a prescription image and extract text/medicine names.
|
| 190 |
+
|
| 191 |
+
- **file**: Prescription image (JPG, PNG, etc.)
|
| 192 |
+
- **return_full_text**: Return full OCR text
|
| 193 |
+
- **extract_medicines**: Extract medicine names from text
|
| 194 |
+
"""
|
| 195 |
+
# Validate file
|
| 196 |
+
allowed_types = {"image/jpeg", "image/png", "image/jpg", "image/webp", "image/bmp"}
|
| 197 |
+
if file.content_type not in allowed_types:
|
| 198 |
+
raise HTTPException(
|
| 199 |
+
status_code=400,
|
| 200 |
+
detail=f"Invalid file type. Allowed: {allowed_types}"
|
| 201 |
+
)
|
| 202 |
+
|
| 203 |
+
try:
|
| 204 |
+
# Read and process image
|
| 205 |
+
contents = await file.read()
|
| 206 |
+
image = Image.open(BytesIO(contents))
|
| 207 |
+
|
| 208 |
+
# Preprocess
|
| 209 |
+
processed_image = preprocess_image(image)
|
| 210 |
+
|
| 211 |
+
# Run OCR
|
| 212 |
+
extracted_text = extract_text_from_image(processed_image)
|
| 213 |
+
|
| 214 |
+
result = {
|
| 215 |
+
"success": True,
|
| 216 |
+
"filename": file.filename,
|
| 217 |
+
"medicines_count": 0,
|
| 218 |
+
"medicines": []
|
| 219 |
+
}
|
| 220 |
+
|
| 221 |
+
if return_full_text:
|
| 222 |
+
result["full_text"] = extracted_text
|
| 223 |
+
|
| 224 |
+
if extract_medicines:
|
| 225 |
+
medicines = extract_medicine_names(extracted_text)
|
| 226 |
+
result["medicines"] = medicines
|
| 227 |
+
result["medicines_count"] = len(medicines)
|
| 228 |
+
|
| 229 |
+
return JSONResponse(content=result)
|
| 230 |
+
|
| 231 |
+
except Exception as e:
|
| 232 |
+
raise HTTPException(status_code=500, detail=str(e))
|
| 233 |
+
|
| 234 |
+
|
| 235 |
+
@app.post("/predict_base64")
|
| 236 |
+
async def predict_base64(
|
| 237 |
+
image_base64: str = Form(...),
|
| 238 |
+
return_full_text: bool = Form(False),
|
| 239 |
+
extract_medicines: bool = Form(True)
|
| 240 |
+
):
|
| 241 |
+
"""
|
| 242 |
+
Send base64-encoded image and extract text/medicine names.
|
| 243 |
+
"""
|
| 244 |
+
try:
|
| 245 |
+
# Decode base64
|
| 246 |
+
image_data = base64.b64decode(image_base64)
|
| 247 |
+
image = Image.open(BytesIO(image_data))
|
| 248 |
+
|
| 249 |
+
# Preprocess
|
| 250 |
+
processed_image = preprocess_image(image)
|
| 251 |
+
|
| 252 |
+
# Run OCR
|
| 253 |
+
extracted_text = extract_text_from_image(processed_image)
|
| 254 |
+
|
| 255 |
+
result = {
|
| 256 |
+
"success": True,
|
| 257 |
+
"medicines_count": 0,
|
| 258 |
+
"medicines": []
|
| 259 |
+
}
|
| 260 |
+
|
| 261 |
+
if return_full_text:
|
| 262 |
+
result["full_text"] = extracted_text
|
| 263 |
+
|
| 264 |
+
if extract_medicines:
|
| 265 |
+
medicines = extract_medicine_names(extracted_text)
|
| 266 |
+
result["medicines"] = medicines
|
| 267 |
+
result["medicines_count"] = len(medicines)
|
| 268 |
+
|
| 269 |
+
return JSONResponse(content=result)
|
| 270 |
+
|
| 271 |
+
except Exception as e:
|
| 272 |
+
raise HTTPException(status_code=500, detail=str(e))
|
| 273 |
+
|
| 274 |
+
|
| 275 |
+
@app.post("/predict_url")
|
| 276 |
+
async def predict_url(
|
| 277 |
+
image_url: str = Form(...),
|
| 278 |
+
return_full_text: bool = Form(False),
|
| 279 |
+
extract_medicines: bool = Form(True)
|
| 280 |
+
):
|
| 281 |
+
"""
|
| 282 |
+
Provide image URL and extract text/medicine names.
|
| 283 |
+
"""
|
| 284 |
+
import requests
|
| 285 |
+
|
| 286 |
+
try:
|
| 287 |
+
response = requests.get(image_url, timeout=30)
|
| 288 |
+
response.raise_for_status()
|
| 289 |
+
|
| 290 |
+
image = Image.open(BytesIO(response.content))
|
| 291 |
+
processed_image = preprocess_image(image)
|
| 292 |
+
extracted_text = extract_text_from_image(processed_image)
|
| 293 |
+
|
| 294 |
+
result = {
|
| 295 |
+
"success": True,
|
| 296 |
+
"image_url": image_url,
|
| 297 |
+
"medicines_count": 0,
|
| 298 |
+
"medicines": []
|
| 299 |
+
}
|
| 300 |
+
|
| 301 |
+
if return_full_text:
|
| 302 |
+
result["full_text"] = extracted_text
|
| 303 |
+
|
| 304 |
+
if extract_medicines:
|
| 305 |
+
medicines = extract_medicine_names(extracted_text)
|
| 306 |
+
result["medicines"] = medicines
|
| 307 |
+
result["medicines_count"] = len(medicines)
|
| 308 |
+
|
| 309 |
+
return JSONResponse(content=result)
|
| 310 |
+
|
| 311 |
+
except Exception as e:
|
| 312 |
+
raise HTTPException(status_code=500, detail=str(e))
|
| 313 |
+
|
| 314 |
+
|
| 315 |
+
# βββ Gradio UI (for Hugging Face Spaces) βββββββββββββββββββββββββ
|
| 316 |
+
def create_gradio_interface():
|
| 317 |
+
"""Create Gradio interface for Hugging Face Spaces."""
|
| 318 |
+
try:
|
| 319 |
+
import gradio as gr
|
| 320 |
+
|
| 321 |
+
def process_image(image):
|
| 322 |
+
if image is None:
|
| 323 |
+
return "Please upload an image", "[]"
|
| 324 |
+
|
| 325 |
+
# Convert to PIL if needed
|
| 326 |
+
if isinstance(image, np.ndarray):
|
| 327 |
+
image = Image.fromarray(image)
|
| 328 |
+
|
| 329 |
+
processed = preprocess_image(image)
|
| 330 |
+
text = extract_text_from_image(processed)
|
| 331 |
+
medicines = extract_medicine_names(text)
|
| 332 |
+
|
| 333 |
+
# Format output
|
| 334 |
+
medicines_text = "\n".join([
|
| 335 |
+
f"{i+1}. {med['name']} (confidence: {med['confidence_score']:.0%})"
|
| 336 |
+
for i, med in enumerate(medicines)
|
| 337 |
+
]) if medicines else "No medicines detected"
|
| 338 |
+
|
| 339 |
+
return text, medicines_text
|
| 340 |
+
|
| 341 |
+
demo = gr.Interface(
|
| 342 |
+
fn=process_image,
|
| 343 |
+
inputs=gr.Image(type="pil", label="Upload Prescription"),
|
| 344 |
+
outputs=[
|
| 345 |
+
gr.Textbox(label="Extracted Text", lines=10),
|
| 346 |
+
gr.Textbox(label="Detected Medicines", lines=10)
|
| 347 |
+
],
|
| 348 |
+
title="π Prescription OCR - Medicine Extractor",
|
| 349 |
+
description="Upload a handwritten prescription image to extract medicine names.",
|
| 350 |
+
examples=[]
|
| 351 |
+
)
|
| 352 |
+
return demo
|
| 353 |
+
|
| 354 |
+
except ImportError:
|
| 355 |
+
return None
|
| 356 |
+
|
| 357 |
+
|
| 358 |
+
# βββ Main Entry Point ββββββββββββββββββββββββββββββββββββββββββββ
|
| 359 |
+
if __name__ == "__main__":
|
| 360 |
+
import uvicorn
|
| 361 |
+
|
| 362 |
+
# Check if running in Hugging Face Spaces (Gradio)
|
| 363 |
+
if os.environ.get("SPACE_ID") or os.environ.get("GRADIO_SERVER_NAME"):
|
| 364 |
+
demo = create_gradio_interface()
|
| 365 |
+
if demo:
|
| 366 |
+
demo.launch(server_name="0.0.0.0", server_port=7860)
|
| 367 |
+
else:
|
| 368 |
+
uvicorn.run(app, host="0.0.0.0", port=7860)
|
| 369 |
+
else:
|
| 370 |
+
# Run FastAPI server
|
| 371 |
+
port = int(os.environ.get("PORT", 7860))
|
| 372 |
+
uvicorn.run(app, host="0.0.0.0", port=port)
|
requirements.txt
ADDED
|
@@ -0,0 +1,10 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
transformers>=4.30.0
|
| 2 |
+
torch>=2.0.0
|
| 3 |
+
Pillow>=9.5.0
|
| 4 |
+
fastapi>=0.100.0
|
| 5 |
+
uvicorn[standard]>=0.23.0
|
| 6 |
+
python-multipart>=0.0.6
|
| 7 |
+
accelerate>=0.20.0
|
| 8 |
+
numpy>=1.24.0
|
| 9 |
+
gradio>=4.0.0
|
| 10 |
+
requests
|