File size: 3,827 Bytes
bbd8905 074fd3c 9192a4a bbd8905 074fd3c bbd8905 074fd3c 9192a4a bbd8905 074fd3c bbd8905 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 | shinyServer(function(input, output, session) {
## ======================================================== ##
## Menu : Microarray
## ======================================================== ##
## ======================================== ##
## Sub Menu : Atlas
## ======================================== ##
atlas_ma <- callModule(overview, "SRscore_microarray", SRscore_microarray, colnames_microarray, microarrayBreaks, microarrayColor,
gokegg, positiveSRscore_ma, negativeSRscore_ma, nonzeroSRscore_ma)
callModule(stress, "ABAm", ABA_ratiom, SRscore_microarray, atlas_ma$geneid, ABA_metadatam)
callModule(stress, "coldm", Cold_ratiom, SRscore_microarray, atlas_ma$geneid, Cold_metadatam)
callModule(stress, "DC3000m", DC3000_ratiom, SRscore_microarray, atlas_ma$geneid, DC3000_metadatam)
callModule(stress, "droughtm", Drought_ratiom, SRscore_microarray, atlas_ma$geneid, Drought_metadatam)
callModule(stress, "heatm", Heat_ratiom, SRscore_microarray, atlas_ma$geneid, Heat_metadatam)
callModule(stress, "highlightm", `High-light_ratiom`, SRscore_microarray, atlas_ma$geneid, `High-light_metadatam`)
callModule(stress, "hypoxiam", Hypoxia_ratiom, SRscore_microarray, atlas_ma$geneid, Hypoxia_metadatam)
callModule(stress, "osmoticm", Osmotic_ratiom, SRscore_microarray, atlas_ma$geneid, Osmotic_metadatam)
callModule(stress, "oxidationm", Oxidation_ratiom, SRscore_microarray, atlas_ma$geneid, Oxidation_metadatam)
callModule(stress, "saltm", Salt_ratiom, SRscore_microarray, atlas_ma$geneid, Salt_metadatam)
callModule(stress, "woundm", Wound_ratiom, SRscore_microarray, atlas_ma$geneid, Wound_metadatam)
## ======================================== ##
## Sub Menu : Template Matching
## ======================================== ##
callModule(TemplateMatch, "microarray", genefinder_microarray, atlas_ma$geneid, SRscore_microarray,
colnames_microarray, microarrayBreaks, microarrayColor)
## ========================================================= ##
## Menu : RNA-Seq
## ========================================================= ##
## ======================================== ##
## Sub Menu : Atlas
## ======================================== ##
atlas_rs <- callModule(overview, "SRscore_rnaseq", SRscore_rnaseq, colnames_rnaseq, rnaseqBreaks, rnaseqColor,
gokegg, positiveSRscore_rs, negativeSRscore_rs, nonzeroSRscore_rs)
callModule(stress, "ABAr", ABA_ratior, SRscore_rnaseq, atlas_rs$geneid, ABA_metadatar)
callModule(stress, "coldr", Cold_ratior, SRscore_rnaseq, atlas_rs$geneid, Cold_metadatar)
callModule(stress, "DC3000r", DC3000_ratior, SRscore_rnaseq, atlas_rs$geneid, DC3000_metadatar)
callModule(stress, "droughtr", Drought_ratior, SRscore_rnaseq, atlas_rs$geneid, Drought_metadatar)
callModule(stress, "heatr", Heat_ratior, SRscore_rnaseq, atlas_rs$geneid, Heat_metadatar)
callModule(stress, "highlightr", `High-light_ratior`, SRscore_rnaseq, atlas_rs$geneid, `High-light_metadatar`)
callModule(stress, "hypoxiar", Hypoxia_ratior, SRscore_rnaseq, atlas_rs$geneid, Hypoxia_metadatar)
callModule(stress, "osmoticr", Osmotic_ratior, SRscore_rnaseq, atlas_rs$geneid, Osmotic_metadatar)
callModule(stress, "oxidationr", Oxidation_ratior, SRscore_rnaseq, atlas_rs$geneid, Oxidation_metadatar)
callModule(stress, "saltr", Salt_ratior, SRscore_rnaseq, atlas_rs$geneid, Salt_metadatar)
callModule(stress, "woundr", Wound_ratior, SRscore_rnaseq, atlas_rs$geneid, Wound_metadatar)
## ======================================== ##
## Sub Menu : Template Matching
## ======================================== ##
callModule(TemplateMatch, "rnaseq", genefinder_rnaseq, atlas_rs$geneid, SRscore_rnaseq,
colnames_rnaseq, rnaseqBreaks, rnaseqColor)
}) # shinyServer |