| | """ |
| | TDD Tests for FhirFlame MCP Server |
| | Write tests FIRST, then implement to make them pass |
| | """ |
| |
|
| | import pytest |
| | import asyncio |
| | import json |
| | import time |
| | from unittest.mock import Mock, patch, AsyncMock |
| | from typing import Dict, Any |
| |
|
| | |
| | try: |
| | from src.fhirflame_mcp_server import FhirFlameMCPServer |
| | from src.codellama_processor import CodeLlamaProcessor |
| | except ImportError: |
| | |
| | FhirFlameMCPServer = None |
| | CodeLlamaProcessor = None |
| |
|
| |
|
| | class TestFhirFlameMCPServerTDD: |
| | """TDD tests for FhirFlame MCP Server - RED phase""" |
| | |
| | def setup_method(self): |
| | """Setup for each test""" |
| | self.sample_medical_text = """ |
| | DISCHARGE SUMMARY |
| | |
| | Patient: John Doe |
| | DOB: 1980-01-01 |
| | MRN: 123456789 |
| | |
| | DIAGNOSIS: Essential Hypertension |
| | |
| | VITAL SIGNS: |
| | - Blood Pressure: 140/90 mmHg |
| | - Heart Rate: 72 bpm |
| | - Temperature: 98.6°F |
| | |
| | MEDICATIONS: |
| | - Lisinopril 10mg daily |
| | - Metoprolol 25mg twice daily |
| | """ |
| | |
| | self.expected_fhir_bundle = { |
| | "resourceType": "Bundle", |
| | "type": "document", |
| | "entry": [ |
| | { |
| | "resource": { |
| | "resourceType": "Patient", |
| | "name": [{"given": ["John"], "family": "Doe"}], |
| | "birthDate": "1980-01-01" |
| | } |
| | } |
| | ] |
| | } |
| |
|
| | @pytest.mark.mcp |
| | @pytest.mark.asyncio |
| | async def test_mcp_server_initialization(self): |
| | """Test: MCP server initializes correctly""" |
| | |
| | |
| | server = FhirFlameMCPServer() |
| | |
| | |
| | assert server is not None |
| | assert hasattr(server, 'tools') |
| | assert len(server.tools) == 2 |
| | assert 'process_medical_document' in server.tools |
| | assert 'validate_fhir_bundle' in server.tools |
| |
|
| | @pytest.mark.mcp |
| | @pytest.mark.asyncio |
| | async def test_process_medical_document_tool_exists(self): |
| | """Test: process_medical_document tool is properly registered""" |
| | |
| | server = FhirFlameMCPServer() |
| | |
| | |
| | tool = server.get_tool('process_medical_document') |
| | |
| | |
| | assert tool is not None |
| | assert tool['name'] == 'process_medical_document' |
| | assert 'description' in tool |
| | assert 'parameters' in tool |
| | assert tool['parameters']['document_content']['required'] is True |
| |
|
| | @pytest.mark.mcp |
| | @pytest.mark.asyncio |
| | async def test_validate_fhir_bundle_tool_exists(self): |
| | """Test: validate_fhir_bundle tool is properly registered""" |
| | |
| | server = FhirFlameMCPServer() |
| | |
| | |
| | tool = server.get_tool('validate_fhir_bundle') |
| | |
| | |
| | assert tool is not None |
| | assert tool['name'] == 'validate_fhir_bundle' |
| | assert 'description' in tool |
| | assert 'parameters' in tool |
| | assert tool['parameters']['fhir_bundle']['required'] is True |
| |
|
| | @pytest.mark.mcp |
| | @pytest.mark.asyncio |
| | async def test_process_medical_document_success(self): |
| | """Test: process_medical_document returns valid FHIR bundle""" |
| | |
| | server = FhirFlameMCPServer() |
| | document_content = "base64_encoded_medical_document" |
| | document_type = "discharge_summary" |
| | |
| | |
| | result = await server.call_tool('process_medical_document', { |
| | 'document_content': document_content, |
| | 'document_type': document_type |
| | }) |
| | |
| | |
| | assert result['success'] is True |
| | assert 'fhir_bundle' in result |
| | assert result['fhir_bundle']['resourceType'] == 'Bundle' |
| | assert len(result['fhir_bundle']['entry']) > 0 |
| | assert result['processing_metadata']['model_used'] == 'codellama:13b-instruct' |
| | assert result['processing_metadata']['gpu_used'] == 'RTX_4090' |
| |
|
| | @pytest.mark.mcp |
| | @pytest.mark.asyncio |
| | async def test_process_medical_document_extracts_entities(self): |
| | """Test: Medical entities are correctly extracted""" |
| | |
| | server = FhirFlameMCPServer() |
| | document_content = self.sample_medical_text |
| | |
| | |
| | result = await server.call_tool('process_medical_document', { |
| | 'document_content': document_content, |
| | 'document_type': 'discharge_summary' |
| | }) |
| | |
| | |
| | assert result['success'] is True |
| | assert result['extraction_results']['entities_found'] > 0 |
| | assert result['extraction_results']['quality_score'] > 0.6 |
| | |
| | |
| | fhir_bundle = result['fhir_bundle'] |
| | patient_found = any( |
| | entry['resource']['resourceType'] == 'Patient' |
| | for entry in fhir_bundle['entry'] |
| | ) |
| | assert patient_found is True |
| |
|
| | @pytest.mark.mcp |
| | @pytest.mark.asyncio |
| | async def test_validate_fhir_bundle_success(self): |
| | """Test: FHIR validation with healthcare grade standards""" |
| | |
| | server = FhirFlameMCPServer() |
| | fhir_bundle = self.expected_fhir_bundle |
| | |
| | |
| | result = await server.call_tool('validate_fhir_bundle', { |
| | 'fhir_bundle': fhir_bundle, |
| | 'validation_level': 'healthcare_grade' |
| | }) |
| | |
| | |
| | assert result['success'] is True |
| | assert result['validation_results']['is_valid'] is True |
| | assert result['validation_results']['compliance_score'] > 0.9 |
| | assert result['compliance_summary']['fhir_r4_compliant'] is True |
| | assert result['compliance_summary']['hipaa_ready'] is True |
| |
|
| | @pytest.mark.mcp |
| | @pytest.mark.asyncio |
| | async def test_mcp_error_handling(self): |
| | """Test: MCP server handles errors gracefully""" |
| | |
| | server = FhirFlameMCPServer() |
| | |
| | |
| | result = await server.call_tool('process_medical_document', { |
| | 'document_content': '', |
| | 'document_type': 'discharge_summary' |
| | }) |
| | |
| | |
| | assert result['success'] is False |
| | assert 'error' in result |
| | assert 'Empty document' in result['error'] |
| |
|
| | @pytest.mark.mcp |
| | @pytest.mark.integration |
| | @pytest.mark.asyncio |
| | async def test_complete_mcp_workflow(self): |
| | """Test: Complete MCP workflow from document to validated FHIR""" |
| | |
| | server = FhirFlameMCPServer() |
| | test_document = self.sample_medical_text |
| | |
| | |
| | |
| | process_result = await server.call_tool('process_medical_document', { |
| | 'document_content': test_document, |
| | 'document_type': 'discharge_summary' |
| | }) |
| | assert process_result['success'] is True |
| | |
| | |
| | validate_result = await server.call_tool('validate_fhir_bundle', { |
| | 'fhir_bundle': process_result['fhir_bundle'], |
| | 'validation_level': 'healthcare_grade' |
| | }) |
| | assert validate_result['success'] is True |
| | |
| | |
| | assert validate_result['validation_results']['is_valid'] is True |
| | assert validate_result['compliance_summary']['hipaa_ready'] is True |
| |
|
| |
|
| | class TestCodeLlamaProcessorTDD: |
| | """TDD tests for CodeLlama processor - RED phase""" |
| | |
| | def setup_method(self): |
| | """Setup for each test""" |
| | self.sample_text = "Patient: John Doe, DOB: 1980-01-01, Diagnosis: Hypertension" |
| |
|
| | @pytest.mark.codellama |
| | @pytest.mark.gpu |
| | def test_codellama_processor_initialization(self): |
| | """Test: CodeLlama processor initializes correctly""" |
| | |
| | |
| | processor = CodeLlamaProcessor() |
| | |
| | |
| | assert processor is not None |
| | assert processor.model_name == 'codellama:13b-instruct' |
| | assert processor.gpu_available is True |
| | assert processor.vram_allocated == '12GB' |
| |
|
| | @pytest.mark.codellama |
| | @pytest.mark.gpu |
| | @pytest.mark.asyncio |
| | async def test_codellama_medical_text_processing(self): |
| | """Test: CodeLlama processes medical text correctly""" |
| | |
| | processor = CodeLlamaProcessor() |
| | medical_text = self.sample_text |
| | |
| | |
| | result = await processor.process_medical_text_codellama(medical_text) |
| | |
| | |
| | assert result['success'] is True |
| | assert result['model_used'] == 'codellama:13b-instruct' |
| | assert result['gpu_used'] == 'RTX_4090' |
| | assert result['vram_used'] == '12GB' |
| | assert 'extracted_data' in result |
| | assert result['processing_time'] < 5.0 |
| |
|
| | @pytest.mark.codellama |
| | @pytest.mark.gpu |
| | @pytest.mark.asyncio |
| | async def test_codellama_json_output_format(self): |
| | """Test: CodeLlama returns proper JSON format for FHIR""" |
| | |
| | processor = CodeLlamaProcessor() |
| | medical_text = self.sample_text |
| | |
| | |
| | result = await processor.process_medical_text_codellama(medical_text) |
| | |
| | |
| | assert result['success'] is True |
| | extracted_data = result['extracted_data'] |
| | |
| | |
| | try: |
| | parsed_data = json.loads(extracted_data) |
| | assert 'patient' in parsed_data |
| | assert 'conditions' in parsed_data |
| | assert 'confidence_score' in parsed_data |
| | except json.JSONDecodeError: |
| | pytest.fail("CodeLlama did not return valid JSON") |
| |
|
| | @pytest.mark.codellama |
| | @pytest.mark.gpu |
| | def test_codellama_gpu_memory_efficiency(self): |
| | """Test: CodeLlama uses GPU memory efficiently""" |
| | |
| | processor = CodeLlamaProcessor() |
| | |
| | |
| | memory_info = processor.get_memory_info() |
| | |
| | |
| | assert memory_info['total_vram'] == '24GB' |
| | assert memory_info['allocated_vram'] == '12GB' |
| | assert memory_info['available_vram'] == '12GB' |
| | assert memory_info['memory_efficient'] is True |
| |
|
| |
|
| | class TestPerformanceBenchmarksTDD: |
| | """TDD performance tests for RTX 4090 optimization""" |
| | |
| | @pytest.mark.benchmark |
| | @pytest.mark.gpu |
| | @pytest.mark.slow |
| | def test_document_processing_speed_benchmark(self): |
| | """Benchmark: Document processing speed on RTX 4090""" |
| | try: |
| | import pytest_benchmark |
| | except ImportError: |
| | pytest.skip("pytest-benchmark not available") |
| | |
| | |
| | processor = CodeLlamaProcessor() |
| | sample_doc = "Patient: Jane Smith, DOB: 1975-05-15, Chief Complaint: Chest pain" |
| | |
| | |
| | start_time = time.time() |
| | result = asyncio.run(processor.process_medical_text_codellama(sample_doc)) |
| | processing_time = time.time() - start_time |
| | |
| | |
| | assert result['success'] is True |
| | assert processing_time < 10.0 |
| | print(f"🕒 Processing completed in {processing_time:.2f} seconds") |
| | assert result['gpu_used'] == 'RTX_4090' |
| |
|
| | @pytest.mark.benchmark |
| | @pytest.mark.gpu |
| | def test_concurrent_processing_capability(self): |
| | """Test: RTX 4090 can handle concurrent medical document processing""" |
| | |
| | processor = CodeLlamaProcessor() |
| | documents = [ |
| | "Patient A: Hypertension diagnosis", |
| | "Patient B: Diabetes management", |
| | "Patient C: Pneumonia treatment" |
| | ] |
| | |
| | |
| | async def process_concurrent(): |
| | tasks = [ |
| | processor.process_medical_text_codellama(doc) |
| | for doc in documents |
| | ] |
| | return await asyncio.gather(*tasks) |
| | |
| | results = asyncio.run(process_concurrent()) |
| | |
| | |
| | assert len(results) == 3 |
| | for result in results: |
| | assert result['success'] is True |
| | assert result['gpu_used'] == 'RTX_4090' |
| |
|
| |
|
| | @pytest.mark.skip(reason="Will fail until implementation - TDD RED phase") |
| | class TestTDDRedPhaseRunner: |
| | """This class ensures tests fail initially as expected in TDD""" |
| | |
| | def test_all_tests_should_fail_initially(self): |
| | """Meta-test: Confirms we're in TDD RED phase""" |
| | |
| | |
| | pass |