guohanghui commited on
Commit
0e1c935
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1 Parent(s): b35429c

Update Dockerfile

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  1. Dockerfile +16 -2
Dockerfile CHANGED
@@ -1,16 +1,30 @@
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- FROM python:3.11
 
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  RUN useradd -m -u 1000 user && \
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  python -m pip install --upgrade pip
 
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  USER user
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  ENV PATH="/home/user/.local/bin:$PATH"
 
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  WORKDIR /app
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  COPY --chown=user ./requirements.txt requirements.txt
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  RUN pip install --no-cache-dir --upgrade -r requirements.txt
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  COPY --chown=user . /app
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- ENV PYTHONPATH=/app/biopython/source:$PYTHONPATH
 
 
 
 
 
 
 
 
 
 
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  EXPOSE 7860
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  ENV MCP_TRANSPORT=http
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  ENV MCP_PORT=7860
 
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  CMD ["python", "biopython/mcp_output/start_mcp.py"]
 
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+ FROM python:3.10
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+
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  RUN useradd -m -u 1000 user && \
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  python -m pip install --upgrade pip
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+
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  USER user
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  ENV PATH="/home/user/.local/bin:$PATH"
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+
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  WORKDIR /app
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  COPY --chown=user ./requirements.txt requirements.txt
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  RUN pip install --no-cache-dir --upgrade -r requirements.txt
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  COPY --chown=user . /app
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+
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+ # ❌ 删除或注释掉这行
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+ # ENV PYTHONPATH=/app/biopython/source:$PYTHONPATH
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+
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+ # ✅ 如果需要从源代码安装 Biopython,先编译安装
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+ RUN if [ -d "/app/biopython/source" ]; then \
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+ cd /app/biopython/source && \
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+ pip install --no-cache-dir . && \
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+ cd /app; \
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+ fi
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+
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  EXPOSE 7860
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  ENV MCP_TRANSPORT=http
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  ENV MCP_PORT=7860
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+
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  CMD ["python", "biopython/mcp_output/start_mcp.py"]