Update Dockerfile

Dockerfile

@@ -1,25 +1,42 @@
-FROM continuumio/miniconda3:latest
+FROM python:3.10
+
+RUN apt-get update && apt-get install -y \
+    gfortran \
+    libopenmpi-dev \
+    openmpi-bin \
+    libopenblas-dev \
+    liblapack-dev \
+    pkg-config \
+    git \
+    && rm -rf /var/lib/apt/lists/*
+
+RUN useradd -m -u 1000 user && \
+    python -m pip install --upgrade pip
 
-RUN useradd -m -u 1000 user
 USER user
+ENV PATH="/home/user/.local/bin:$PATH"
 WORKDIR /app
 
-# 创建 conda 环境并安装 pyPDAF
-RUN conda create -n pypdaf -c conda-forge yumengch::pypdaf python=3.10 -y && \
-    conda clean -afy
+# 克隆完整的 pyPDAF 仓库（包含 submodule）
+RUN git clone --recursive https://github.com/yumengch/pyPDAF.git pyPDAF_source
 
-# 激活环境
-SHELL ["conda", "run", "-n", "pypdaf", "/bin/bash", "-c"]
+# 编译安装 pyPDAF
+WORKDIR /app/pyPDAF_source
+RUN pip install --no-cache-dir meson-python meson ninja cython numpy mpi4py && \
+    pip install --no-cache-dir -v .
+
+# 回到应用目录
+WORKDIR /app
 
-# 复制应用代码
+# 复制 MCP 代码
 COPY --chown=user ./pyPDAF/mcp_output /app/pyPDAF/mcp_output
 COPY --chown=user ./requirements.txt /app/requirements.txt
 
-# 修复导入问题：将 src.pyPDAF 替换为 pyPDAF
-RUN sed -i 's/from src\.pyPDAF import/from pyPDAF import/g' /app/pyPDAF/mcp_output/mcp_plugin/mcp_service.py
+# 修复导入语句（从 src.pyPDAF 改为 pyPDAF）
+RUN sed -i 's/from src\.pyPDAF/from pyPDAF/g' /app/pyPDAF/mcp_output/mcp_plugin/mcp_service.py
 
 # 安装其他依赖
-RUN pip install --no-cache-dir -r requirements.txt
+RUN pip install --no-cache-dir --upgrade -r requirements.txt
 
 ENV PYTHONPATH=/app:$PYTHONPATH
 ENV MCP_TRANSPORT=http
@@ -27,4 +44,4 @@ ENV MCP_PORT=7860
 
 EXPOSE 7860
 
-CMD ["conda", "run", "--no-capture-output", "-n", "pypdaf", "python", "pyPDAF/mcp_output/start_mcp.py"]
+CMD ["python", "pyPDAF/mcp_output/start_mcp.py"]