Upload heatmap.py
Browse files- quread/heatmap.py +165 -16
quread/heatmap.py
CHANGED
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@@ -3,13 +3,21 @@ from __future__ import annotations
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import logging
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from dataclasses import dataclass
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from typing import Dict, Optional, Tuple
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import numpy as np
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import matplotlib.pyplot as plt
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from .metrics import compute_metrics_from_csv, MetricWeights, MetricThresholds
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logger = logging.getLogger(__name__)
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@@ -85,6 +93,39 @@ def _resolve_metric(metric: str) -> str:
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return _METRIC_ALIASES.get(m, "activity_count")
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def make_metric_heatmap(
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csv_text: str,
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n_qubits: int,
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@@ -101,24 +142,17 @@ def make_metric_heatmap(
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Builds a heatmap for a selected metric computed from circuit CSV and optional calibration JSON.
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"""
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cfg = cfg or HeatmapConfig()
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metric_key = _resolve_metric(metric)
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grid = np.full((cfg.rows, cfg.cols), cfg.missing_value, dtype=float)
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metrics, meta = compute_metrics_from_csv(
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csv_text,
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int(n_qubits),
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)
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values = metrics[metric_key]
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# place into chip grid
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for q, (rr, cc) in coords.items():
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if 0 <= q < n_qubits and 0 <= rr < cfg.rows and 0 <= cc < cfg.cols:
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grid[rr, cc] = values[q]
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# plot
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fig, ax = plt.subplots(figsize=(6, 5))
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@@ -194,6 +228,121 @@ def make_metric_heatmap(
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return fig
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def make_activity_heatmap(
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csv_text: str,
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n_qubits: int,
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import logging
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from dataclasses import dataclass
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from typing import Dict, Optional, Tuple, Any
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import numpy as np
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import matplotlib.pyplot as plt
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from .metrics import compute_metrics_from_csv, MetricWeights, MetricThresholds
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_HAS_PLOTLY = False
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try:
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import plotly.graph_objects as go
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_HAS_PLOTLY = True
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except Exception:
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_HAS_PLOTLY = False
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logger = logging.getLogger(__name__)
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return _METRIC_ALIASES.get(m, "activity_count")
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def plotly_available() -> bool:
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return bool(_HAS_PLOTLY)
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def _build_metric_grid(
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csv_text: str,
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n_qubits: int,
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metric: str,
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cfg: HeatmapConfig,
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calibration_json: str,
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state_vector: Optional[np.ndarray],
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weights: Optional[MetricWeights],
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thresholds: Optional[MetricThresholds],
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qubit_coords: Optional[Dict[int, Tuple[int, int]]],
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) -> Tuple[str, np.ndarray, np.ndarray, Dict[str, Any], Dict[int, Tuple[int, int]]]:
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metric_key = _resolve_metric(metric)
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coords = qubit_coords or _default_qubit_coords(n_qubits, cfg.rows, cfg.cols)
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grid = np.full((cfg.rows, cfg.cols), cfg.missing_value, dtype=float)
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metrics, meta = compute_metrics_from_csv(
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csv_text,
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int(n_qubits),
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calibration_json=calibration_json,
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state_vector=state_vector,
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weights=weights,
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thresholds=thresholds,
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)
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values = metrics[metric_key]
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for q, (rr, cc) in coords.items():
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if 0 <= q < n_qubits and 0 <= rr < cfg.rows and 0 <= cc < cfg.cols:
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grid[rr, cc] = values[q]
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return metric_key, grid, values, meta, coords
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def make_metric_heatmap(
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csv_text: str,
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n_qubits: int,
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Builds a heatmap for a selected metric computed from circuit CSV and optional calibration JSON.
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"""
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cfg = cfg or HeatmapConfig()
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metric_key, grid, values, meta, coords = _build_metric_grid(
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csv_text,
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int(n_qubits),
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str(metric),
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cfg,
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calibration_json,
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state_vector,
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weights,
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thresholds,
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qubit_coords,
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)
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# plot
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fig, ax = plt.subplots(figsize=(6, 5))
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return fig
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def make_metric_heatmap_plotly(
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csv_text: str,
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n_qubits: int,
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metric: str = "activity_count",
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cfg: Optional[HeatmapConfig] = None,
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calibration_json: str = "",
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state_vector: Optional[np.ndarray] = None,
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weights: Optional[MetricWeights] = None,
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thresholds: Optional[MetricThresholds] = None,
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highlight_threshold: Optional[float] = None,
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qubit_coords: Optional[Dict[int, Tuple[int, int]]] = None,
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) -> Any:
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"""
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Builds an interactive Plotly heatmap for zoom/pan exploration.
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"""
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if not _HAS_PLOTLY:
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raise RuntimeError("Plotly is not available in this environment.")
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cfg = cfg or HeatmapConfig()
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metric_key, grid, values, meta, coords = _build_metric_grid(
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csv_text,
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int(n_qubits),
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str(metric),
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cfg,
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calibration_json,
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state_vector,
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weights,
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thresholds,
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qubit_coords,
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)
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colorscale = _METRIC_CMAP[metric_key]
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zmin = float(np.min(grid))
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zmax = float(np.max(grid))
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if zmax <= zmin:
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zmax = zmin + 1e-9
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fig = go.Figure(
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data=go.Heatmap(
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z=grid,
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colorscale=colorscale,
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zmin=zmin,
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zmax=zmax,
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colorbar={"title": metric_key},
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hoverongaps=False,
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)
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)
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for q, (rr, cc) in coords.items():
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if 0 <= rr < cfg.rows and 0 <= cc < cfg.cols:
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fig.add_annotation(
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x=cc,
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y=rr,
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text=f"q{q}",
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showarrow=False,
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font={"size": 10, "color": "#0f172a"},
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)
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notes = []
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skipped = int(meta.get("skipped_rows", 0))
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if skipped:
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logger.warning("Skipped %d malformed CSV rows while building heatmap.", skipped)
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notes.append(f"Skipped malformed CSV rows: {skipped}")
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calibration_note = str(meta.get("calibration_note", "") or "").strip()
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if calibration_note:
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notes.append(calibration_note)
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if highlight_threshold is not None:
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thr = float(np.clip(float(highlight_threshold), 0.0, 1e9))
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highlighted = 0
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for q, (rr, cc) in coords.items():
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if 0 <= q < n_qubits and 0 <= rr < cfg.rows and 0 <= cc < cfg.cols:
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if float(values[q]) >= thr:
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highlighted += 1
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fig.add_shape(
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type="rect",
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x0=cc - 0.5,
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x1=cc + 0.5,
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y0=rr - 0.5,
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y1=rr + 0.5,
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line={"color": "#f59e0b", "width": 2},
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fillcolor="rgba(0,0,0,0)",
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)
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notes.append(f"Highlighted qubits (value >= {thr:.4g}): {highlighted}")
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fig.update_layout(
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title=_METRIC_TITLES[metric_key],
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xaxis={"title": "Chip column", "tickmode": "array", "tickvals": list(range(cfg.cols))},
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yaxis={
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"title": "Chip row",
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"tickmode": "array",
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"tickvals": list(range(cfg.rows)),
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"autorange": "reversed",
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"scaleanchor": "x",
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"scaleratio": 1,
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},
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margin={"l": 50, "r": 30, "t": 70, "b": 50},
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dragmode="pan",
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)
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if notes:
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fig.add_annotation(
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text=" | ".join(notes),
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xref="paper",
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yref="paper",
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x=0.5,
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y=-0.17,
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showarrow=False,
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font={"size": 11, "color": "#92400e"},
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)
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return fig
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def make_activity_heatmap(
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csv_text: str,
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n_qubits: int,
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