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Update app.py
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app.py
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@@ -1,3 +1,375 @@
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| 1 |
import gradio as gr
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import torch
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import torch.nn as nn
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@@ -11,33 +383,28 @@ from TorchCRF import CRF
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# ---------------------------------------------------------
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# 1. CONFIGURATION
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# ---------------------------------------------------------
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-
# Ensure this filename matches exactly what you uploaded to the Space
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MODEL_FILENAME = "layoutlmv3_bilstm_crf_hybrid.pth"
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BASE_MODEL_ID = "microsoft/layoutlmv3-base"
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-
#
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LABELS = [
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"O",
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"B-QUESTION", "I-QUESTION",
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"B-OPTION", "I-OPTION",
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"B-ANSWER", "I-ANSWER",
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"B-SECTION_HEADING", "I-SECTION_HEADING",
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-
"B-PASSAGE", "I-PASSAGE"
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]
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LABEL2ID = {l: i for i, l in enumerate(LABELS)}
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ID2LABEL = {i: l for l, i in LABEL2ID.items()}
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device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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tokenizer = LayoutLMv3TokenizerFast.from_pretrained(BASE_MODEL_ID)
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-
# ---------------------------------------------------------
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-
# 2. MODEL ARCHITECTURE
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-
# ---------------------------------------------------------
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-
# ⚠️ ACTION REQUIRED:
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# Replace this class with the exact class definition of your
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# NEW HYBRID MODEL. The class name and structure must match
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# what was used when you saved 'layoutlmv3_nonlinear_scratch.pth'.
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# ---------------------------------------------------------
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# ---------------------------------------------------------
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# 2. MODEL ARCHITECTURE (LayoutLMv3 + BiLSTM + CRF)
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# ---------------------------------------------------------
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@@ -46,52 +413,47 @@ class HybridModel(nn.Module):
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super().__init__()
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self.layoutlm = LayoutLMv3Model.from_pretrained(BASE_MODEL_ID)
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-
#
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-
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lstm_hidden_size =
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# BiLSTM Layer
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# input_size=768, hidden=384, bidir=True -> output_dim = 384 * 2 = 768
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self.lstm = nn.LSTM(
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input_size=
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hidden_size=lstm_hidden_size,
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num_layers=
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batch_first=True,
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bidirectional=True
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)
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-
# Dropout (Optional, check if you used this in training)
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self.dropout = nn.Dropout(0.1)
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-
# Classifier
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self.classifier = nn.Linear(lstm_hidden_size * 2, num_labels)
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-
# CRF Layer
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self.crf = CRF(num_labels)
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def forward(self, input_ids, bbox, attention_mask, labels=None):
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-
# 1. LayoutLMv3 Base
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outputs = self.layoutlm(input_ids=input_ids, bbox=bbox, attention_mask=attention_mask)
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-
sequence_output = outputs.last_hidden_state
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-
#
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-
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lstm_output, _ = self.lstm(sequence_output) # [Batch, Seq, 768]
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#
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lstm_output = self.dropout(lstm_output)
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-
emissions = self.classifier(lstm_output)
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-
# 4. CRF
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if labels is not None:
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# Training/Eval
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log_likelihood = self.crf(emissions, labels, mask=attention_mask.bool())
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return -log_likelihood.mean()
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else:
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-
# Inference
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return self.crf.viterbi_decode(emissions, mask=attention_mask.bool())
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# ---------------------------------------------------------
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-
# 3. MODEL LOADING
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# ---------------------------------------------------------
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model = None
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@@ -100,17 +462,18 @@ def load_model():
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if model is None:
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print(f"🔄 Loading model from {MODEL_FILENAME}...")
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if not os.path.exists(MODEL_FILENAME):
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raise FileNotFoundError(f"❌ Model file '{MODEL_FILENAME}' not found.
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| 105 |
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# Initialize the model structure
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model = HybridModel(num_labels=len(LABELS))
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# Load
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try:
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state_dict = torch.load(MODEL_FILENAME, map_location=device)
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model.load_state_dict(state_dict)
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except RuntimeError as e:
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raise RuntimeError(f"❌
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model.to(device)
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model.eval()
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@@ -118,7 +481,7 @@ def load_model():
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return model
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# ---------------------------------------------------------
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-
# 4. JSON CONVERSION LOGIC
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# ---------------------------------------------------------
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def convert_bio_to_structured_json(predictions):
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structured_data = []
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@@ -138,7 +501,6 @@ def convert_bio_to_structured_json(predictions):
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else: item['passage'] = passage_text
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passage_buffer.clear()
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-
# Flatten predictions list if strictly page-separated
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flat_predictions = []
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for page in predictions:
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flat_predictions.extend(page['data'])
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@@ -146,9 +508,16 @@ def convert_bio_to_structured_json(predictions):
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for idx, item in enumerate(flat_predictions):
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word = item['word']
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label = item['predicted_label']
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entity_type = label[2:].strip() if label.startswith(('B-', 'I-')) else None
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-
current_text_buffer.append(word)
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previous_entity_type = last_entity_type
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is_passage_label = (entity_type == 'PASSAGE')
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@@ -242,7 +611,6 @@ def convert_bio_to_structured_json(predictions):
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current_item['text'] = ' '.join(current_text_buffer).strip()
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structured_data.append(current_item)
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-
# Final Cleanup
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for item in structured_data:
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if 'text' in item: item['text'] = re.sub(r'\s{2,}', ' ', item['text']).strip()
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if 'new_passage' in item: item['new_passage'] = re.sub(r'\s{2,}', ' ', item['new_passage']).strip()
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@@ -250,7 +618,7 @@ def convert_bio_to_structured_json(predictions):
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return structured_data
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# ---------------------------------------------------------
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-
# 5.
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# ---------------------------------------------------------
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def process_pdf(pdf_file):
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if pdf_file is None:
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@@ -259,7 +627,6 @@ def process_pdf(pdf_file):
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try:
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active_model = load_model()
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-
# A. Extract Text and Boxes
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extracted_pages = []
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with pdfplumber.open(pdf_file.name) as pdf:
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for page_idx, page in enumerate(pdf.pages):
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@@ -271,28 +638,22 @@ def process_pdf(pdf_file):
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for w in words_data:
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text = w['text']
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-
# Normalize bbox to 0-1000 scale
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x0 = int((w['x0'] / width) * 1000)
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top = int((w['top'] / height) * 1000)
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x1 = int((w['x1'] / width) * 1000)
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bottom = int((w['bottom'] / height) * 1000)
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-
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# Safety clamp
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box = [max(0, min(x0, 1000)), max(0, min(top, 1000)),
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max(0, min(x1, 1000)), max(0, min(bottom, 1000))]
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-
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page_tokens.append(text)
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page_bboxes.append(box)
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extracted_pages.append({"page_id": page_idx, "tokens": page_tokens, "bboxes": page_bboxes})
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-
# B. Run Inference
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raw_predictions = []
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for page in extracted_pages:
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tokens = page['tokens']
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bboxes = page['bboxes']
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if not tokens: continue
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-
# Tokenize
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encoding = tokenizer(
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tokens,
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boxes=bboxes,
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@@ -307,18 +668,12 @@ def process_pdf(pdf_file):
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bbox = encoding.bbox.to(device)
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attention_mask = encoding.attention_mask.to(device)
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-
# Predict
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with torch.no_grad():
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#
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-
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-
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-
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# Check if preds returns a tuple (loss, tags) or just tags
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# The CRF implementation usually returns a list of lists of tags in viterbi_decode
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pred_tags = preds[0] if isinstance(preds, tuple) else preds[0]
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# Note: Standard CRF.viterbi_decode returns List[List[int]], so [0] gets the first batch item
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-
# Alignment
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word_ids = encoding.word_ids()
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aligned_data = []
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prev_word_idx = None
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@@ -326,20 +681,16 @@ def process_pdf(pdf_file):
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for i, word_idx in enumerate(word_ids):
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if word_idx is None: continue
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if word_idx != prev_word_idx:
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-
# pred_tags is likely a list of ints.
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-
# If pred_tags[i] fails, your max_length might be cutting off tags,
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# or the model output shape differs from the token length.
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if i < len(pred_tags):
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label_id = pred_tags[i]
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label_str = ID2LABEL.get(label_id, "O")
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aligned_data.append({"word": tokens[word_idx], "predicted_label": label_str})
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prev_word_idx = word_idx
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raw_predictions.append({"data": aligned_data})
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-
# C. Convert to Structured JSON
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final_json = convert_bio_to_structured_json(raw_predictions)
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-
# Save output
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output_filename = "structured_output.json"
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with open(output_filename, "w", encoding="utf-8") as f:
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json.dump(final_json, f, indent=2, ensure_ascii=False)
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@@ -360,7 +711,7 @@ iface = gr.Interface(
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gr.File(label="Download JSON Output"),
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gr.Textbox(label="Status Log", lines=10)
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],
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title="
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| 364 |
description="Upload a document to extract structured data using the custom Hybrid LayoutLMv3 model.",
|
| 365 |
flagging_mode="never"
|
| 366 |
)
|
|
|
|
| 1 |
+
# import gradio as gr
|
| 2 |
+
# import torch
|
| 3 |
+
# import torch.nn as nn
|
| 4 |
+
# import pdfplumber
|
| 5 |
+
# import json
|
| 6 |
+
# import os
|
| 7 |
+
# import re
|
| 8 |
+
# from transformers import LayoutLMv3TokenizerFast, LayoutLMv3Model
|
| 9 |
+
# from TorchCRF import CRF
|
| 10 |
+
|
| 11 |
+
# # ---------------------------------------------------------
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| 12 |
+
# # 1. CONFIGURATION
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| 13 |
+
# # ---------------------------------------------------------
|
| 14 |
+
# # Ensure this filename matches exactly what you uploaded to the Space
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| 15 |
+
# MODEL_FILENAME = "layoutlmv3_bilstm_crf_hybrid.pth"
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| 16 |
+
# BASE_MODEL_ID = "microsoft/layoutlmv3-base"
|
| 17 |
+
|
| 18 |
+
# # Define your labels exactly as they were during training
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| 19 |
+
# LABELS = [
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| 20 |
+
# "O",
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| 21 |
+
# "B-QUESTION", "I-QUESTION",
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| 22 |
+
# "B-OPTION", "I-OPTION",
|
| 23 |
+
# "B-ANSWER", "I-ANSWER",
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| 24 |
+
# "B-SECTION_HEADING", "I-SECTION_HEADING",
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| 25 |
+
# "B-PASSAGE", "I-PASSAGE"
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| 26 |
+
# ]
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| 27 |
+
# LABEL2ID = {l: i for i, l in enumerate(LABELS)}
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| 28 |
+
# ID2LABEL = {i: l for l, i in LABEL2ID.items()}
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| 29 |
+
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| 30 |
+
# device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
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| 31 |
+
# tokenizer = LayoutLMv3TokenizerFast.from_pretrained(BASE_MODEL_ID)
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| 32 |
+
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| 33 |
+
# # ---------------------------------------------------------
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| 34 |
+
# # 2. MODEL ARCHITECTURE
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| 35 |
+
# # ---------------------------------------------------------
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| 36 |
+
# # ⚠️ ACTION REQUIRED:
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| 37 |
+
# # Replace this class with the exact class definition of your
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| 38 |
+
# # NEW HYBRID MODEL. The class name and structure must match
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| 39 |
+
# # what was used when you saved 'layoutlmv3_nonlinear_scratch.pth'.
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| 40 |
+
# # ---------------------------------------------------------
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| 41 |
+
# # ---------------------------------------------------------
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| 42 |
+
# # 2. MODEL ARCHITECTURE (LayoutLMv3 + BiLSTM + CRF)
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| 43 |
+
# # ---------------------------------------------------------
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| 44 |
+
# class HybridModel(nn.Module):
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| 45 |
+
# def __init__(self, num_labels):
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| 46 |
+
# super().__init__()
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| 47 |
+
# self.layoutlm = LayoutLMv3Model.from_pretrained(BASE_MODEL_ID)
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| 48 |
+
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| 49 |
+
# # Config for BiLSTM
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| 50 |
+
# hidden_size = self.layoutlm.config.hidden_size # Usually 768
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| 51 |
+
# lstm_hidden_size = hidden_size // 2 # 384, so bidirectional output is 768
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| 52 |
+
|
| 53 |
+
# # BiLSTM Layer
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| 54 |
+
# # input_size=768, hidden=384, bidir=True -> output_dim = 384 * 2 = 768
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| 55 |
+
# self.lstm = nn.LSTM(
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| 56 |
+
# input_size=hidden_size,
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| 57 |
+
# hidden_size=lstm_hidden_size,
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| 58 |
+
# num_layers=1,
|
| 59 |
+
# batch_first=True,
|
| 60 |
+
# bidirectional=True
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| 61 |
+
# )
|
| 62 |
+
|
| 63 |
+
# # Dropout (Optional, check if you used this in training)
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| 64 |
+
# self.dropout = nn.Dropout(0.1)
|
| 65 |
+
|
| 66 |
+
# # Classifier: Maps BiLSTM output (768) to Label count
|
| 67 |
+
# self.classifier = nn.Linear(lstm_hidden_size * 2, num_labels)
|
| 68 |
+
|
| 69 |
+
# # CRF Layer
|
| 70 |
+
# self.crf = CRF(num_labels)
|
| 71 |
+
|
| 72 |
+
# def forward(self, input_ids, bbox, attention_mask, labels=None):
|
| 73 |
+
# # 1. LayoutLMv3 Base
|
| 74 |
+
# outputs = self.layoutlm(input_ids=input_ids, bbox=bbox, attention_mask=attention_mask)
|
| 75 |
+
# sequence_output = outputs.last_hidden_state # [Batch, Seq, 768]
|
| 76 |
+
|
| 77 |
+
# # 2. BiLSTM
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| 78 |
+
# # LSTM returns (output, (h_n, c_n)). We only need output.
|
| 79 |
+
# lstm_output, _ = self.lstm(sequence_output) # [Batch, Seq, 768]
|
| 80 |
+
|
| 81 |
+
# # 3. Dropout & Classifier
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| 82 |
+
# lstm_output = self.dropout(lstm_output)
|
| 83 |
+
# emissions = self.classifier(lstm_output) # [Batch, Seq, Num_Labels]
|
| 84 |
+
|
| 85 |
+
# # 4. CRF
|
| 86 |
+
# if labels is not None:
|
| 87 |
+
# # Training/Eval (Loss)
|
| 88 |
+
# log_likelihood = self.crf(emissions, labels, mask=attention_mask.bool())
|
| 89 |
+
# return -log_likelihood.mean()
|
| 90 |
+
# else:
|
| 91 |
+
# # Inference (Prediction Tags)
|
| 92 |
+
# return self.crf.viterbi_decode(emissions, mask=attention_mask.bool())
|
| 93 |
+
# # ---------------------------------------------------------
|
| 94 |
+
# # 3. MODEL LOADING LOGIC
|
| 95 |
+
# # ---------------------------------------------------------
|
| 96 |
+
# model = None
|
| 97 |
+
|
| 98 |
+
# def load_model():
|
| 99 |
+
# global model
|
| 100 |
+
# if model is None:
|
| 101 |
+
# print(f"🔄 Loading model from {MODEL_FILENAME}...")
|
| 102 |
+
# if not os.path.exists(MODEL_FILENAME):
|
| 103 |
+
# raise FileNotFoundError(f"❌ Model file '{MODEL_FILENAME}' not found. Please upload it to the Files tab of your Space.")
|
| 104 |
+
|
| 105 |
+
# # Initialize the model structure
|
| 106 |
+
# model = HybridModel(num_labels=len(LABELS))
|
| 107 |
+
|
| 108 |
+
# # Load weights
|
| 109 |
+
# try:
|
| 110 |
+
# state_dict = torch.load(MODEL_FILENAME, map_location=device)
|
| 111 |
+
# model.load_state_dict(state_dict)
|
| 112 |
+
# except RuntimeError as e:
|
| 113 |
+
# raise RuntimeError(f"❌ State dictionary mismatch. Ensure the 'HybridModel' class structure in app.py matches the model you trained.\nDetails: {e}")
|
| 114 |
+
|
| 115 |
+
# model.to(device)
|
| 116 |
+
# model.eval()
|
| 117 |
+
# print("✅ Model loaded successfully.")
|
| 118 |
+
# return model
|
| 119 |
+
|
| 120 |
+
# # ---------------------------------------------------------
|
| 121 |
+
# # 4. JSON CONVERSION LOGIC (Your Custom Logic)
|
| 122 |
+
# # ---------------------------------------------------------
|
| 123 |
+
# def convert_bio_to_structured_json(predictions):
|
| 124 |
+
# structured_data = []
|
| 125 |
+
# current_item = None
|
| 126 |
+
# current_option_key = None
|
| 127 |
+
# current_passage_buffer = []
|
| 128 |
+
# current_text_buffer = []
|
| 129 |
+
# first_question_started = False
|
| 130 |
+
# last_entity_type = None
|
| 131 |
+
# just_finished_i_option = False
|
| 132 |
+
# is_in_new_passage = False
|
| 133 |
+
|
| 134 |
+
# def finalize_passage_to_item(item, passage_buffer):
|
| 135 |
+
# if passage_buffer:
|
| 136 |
+
# passage_text = re.sub(r'\s{2,}', ' ', ' '.join(passage_buffer)).strip()
|
| 137 |
+
# if item.get('passage'): item['passage'] += ' ' + passage_text
|
| 138 |
+
# else: item['passage'] = passage_text
|
| 139 |
+
# passage_buffer.clear()
|
| 140 |
+
|
| 141 |
+
# # Flatten predictions list if strictly page-separated
|
| 142 |
+
# flat_predictions = []
|
| 143 |
+
# for page in predictions:
|
| 144 |
+
# flat_predictions.extend(page['data'])
|
| 145 |
+
|
| 146 |
+
# for idx, item in enumerate(flat_predictions):
|
| 147 |
+
# word = item['word']
|
| 148 |
+
# label = item['predicted_label']
|
| 149 |
+
# entity_type = label[2:].strip() if label.startswith(('B-', 'I-')) else None
|
| 150 |
+
# current_text_buffer.append(word)
|
| 151 |
+
|
| 152 |
+
# previous_entity_type = last_entity_type
|
| 153 |
+
# is_passage_label = (entity_type == 'PASSAGE')
|
| 154 |
+
|
| 155 |
+
# if not first_question_started:
|
| 156 |
+
# if label != 'B-QUESTION' and not is_passage_label:
|
| 157 |
+
# just_finished_i_option = False
|
| 158 |
+
# is_in_new_passage = False
|
| 159 |
+
# continue
|
| 160 |
+
# if is_passage_label:
|
| 161 |
+
# current_passage_buffer.append(word)
|
| 162 |
+
# last_entity_type = 'PASSAGE'
|
| 163 |
+
# just_finished_i_option = False
|
| 164 |
+
# is_in_new_passage = False
|
| 165 |
+
# continue
|
| 166 |
+
|
| 167 |
+
# if label == 'B-QUESTION':
|
| 168 |
+
# if not first_question_started:
|
| 169 |
+
# header_text = ' '.join(current_text_buffer[:-1]).strip()
|
| 170 |
+
# if header_text or current_passage_buffer:
|
| 171 |
+
# metadata_item = {'type': 'METADATA', 'passage': ''}
|
| 172 |
+
# finalize_passage_to_item(metadata_item, current_passage_buffer)
|
| 173 |
+
# if header_text: metadata_item['text'] = header_text
|
| 174 |
+
# structured_data.append(metadata_item)
|
| 175 |
+
# first_question_started = True
|
| 176 |
+
# current_text_buffer = [word]
|
| 177 |
+
|
| 178 |
+
# if current_item is not None:
|
| 179 |
+
# finalize_passage_to_item(current_item, current_passage_buffer)
|
| 180 |
+
# current_item['text'] = ' '.join(current_text_buffer[:-1]).strip()
|
| 181 |
+
# structured_data.append(current_item)
|
| 182 |
+
# current_text_buffer = [word]
|
| 183 |
+
|
| 184 |
+
# current_item = {
|
| 185 |
+
# 'question': word, 'options': {}, 'answer': '', 'passage': '', 'text': ''
|
| 186 |
+
# }
|
| 187 |
+
# current_option_key = None
|
| 188 |
+
# last_entity_type = 'QUESTION'
|
| 189 |
+
# just_finished_i_option = False
|
| 190 |
+
# is_in_new_passage = False
|
| 191 |
+
# continue
|
| 192 |
+
|
| 193 |
+
# if current_item is not None:
|
| 194 |
+
# if is_in_new_passage:
|
| 195 |
+
# if 'new_passage' not in current_item: current_item['new_passage'] = word
|
| 196 |
+
# else: current_item['new_passage'] += f' {word}'
|
| 197 |
+
# if label.startswith('B-') or (label.startswith('I-') and entity_type != 'PASSAGE'):
|
| 198 |
+
# is_in_new_passage = False
|
| 199 |
+
# if label.startswith(('B-', 'I-')): last_entity_type = entity_type
|
| 200 |
+
# continue
|
| 201 |
+
|
| 202 |
+
# is_in_new_passage = False
|
| 203 |
+
# if label.startswith('B-'):
|
| 204 |
+
# if entity_type in ['QUESTION', 'OPTION', 'ANSWER', 'SECTION_HEADING']:
|
| 205 |
+
# finalize_passage_to_item(current_item, current_passage_buffer)
|
| 206 |
+
# current_passage_buffer = []
|
| 207 |
+
# last_entity_type = entity_type
|
| 208 |
+
# if entity_type == 'PASSAGE':
|
| 209 |
+
# if previous_entity_type == 'OPTION' and just_finished_i_option:
|
| 210 |
+
# current_item['new_passage'] = word
|
| 211 |
+
# is_in_new_passage = True
|
| 212 |
+
# else: current_passage_buffer.append(word)
|
| 213 |
+
# elif entity_type == 'OPTION':
|
| 214 |
+
# current_option_key = word
|
| 215 |
+
# current_item['options'][current_option_key] = word
|
| 216 |
+
# just_finished_i_option = False
|
| 217 |
+
# elif entity_type == 'ANSWER':
|
| 218 |
+
# current_item['answer'] = word
|
| 219 |
+
# current_option_key = None
|
| 220 |
+
# just_finished_i_option = False
|
| 221 |
+
# elif entity_type == 'QUESTION':
|
| 222 |
+
# current_item['question'] += f' {word}'
|
| 223 |
+
# just_finished_i_option = False
|
| 224 |
+
|
| 225 |
+
# elif label.startswith('I-'):
|
| 226 |
+
# if entity_type == 'QUESTION': current_item['question'] += f' {word}'
|
| 227 |
+
# elif entity_type == 'PASSAGE':
|
| 228 |
+
# if previous_entity_type == 'OPTION' and just_finished_i_option:
|
| 229 |
+
# current_item['new_passage'] = word
|
| 230 |
+
# is_in_new_passage = True
|
| 231 |
+
# else:
|
| 232 |
+
# if not current_passage_buffer: last_entity_type = 'PASSAGE'
|
| 233 |
+
# current_passage_buffer.append(word)
|
| 234 |
+
# elif entity_type == 'OPTION' and current_option_key is not None:
|
| 235 |
+
# current_item['options'][current_option_key] += f' {word}'
|
| 236 |
+
# just_finished_i_option = True
|
| 237 |
+
# elif entity_type == 'ANSWER': current_item['answer'] += f' {word}'
|
| 238 |
+
# just_finished_i_option = (entity_type == 'OPTION')
|
| 239 |
+
|
| 240 |
+
# if current_item is not None:
|
| 241 |
+
# finalize_passage_to_item(current_item, current_passage_buffer)
|
| 242 |
+
# current_item['text'] = ' '.join(current_text_buffer).strip()
|
| 243 |
+
# structured_data.append(current_item)
|
| 244 |
+
|
| 245 |
+
# # Final Cleanup
|
| 246 |
+
# for item in structured_data:
|
| 247 |
+
# if 'text' in item: item['text'] = re.sub(r'\s{2,}', ' ', item['text']).strip()
|
| 248 |
+
# if 'new_passage' in item: item['new_passage'] = re.sub(r'\s{2,}', ' ', item['new_passage']).strip()
|
| 249 |
+
|
| 250 |
+
# return structured_data
|
| 251 |
+
|
| 252 |
+
# # ---------------------------------------------------------
|
| 253 |
+
# # 5. INFERENCE PIPELINE
|
| 254 |
+
# # ---------------------------------------------------------
|
| 255 |
+
# def process_pdf(pdf_file):
|
| 256 |
+
# if pdf_file is None:
|
| 257 |
+
# return None, "⚠️ Please upload a PDF file."
|
| 258 |
+
|
| 259 |
+
# try:
|
| 260 |
+
# active_model = load_model()
|
| 261 |
+
|
| 262 |
+
# # A. Extract Text and Boxes
|
| 263 |
+
# extracted_pages = []
|
| 264 |
+
# with pdfplumber.open(pdf_file.name) as pdf:
|
| 265 |
+
# for page_idx, page in enumerate(pdf.pages):
|
| 266 |
+
# width, height = page.width, page.height
|
| 267 |
+
# words_data = page.extract_words()
|
| 268 |
+
|
| 269 |
+
# page_tokens = []
|
| 270 |
+
# page_bboxes = []
|
| 271 |
+
|
| 272 |
+
# for w in words_data:
|
| 273 |
+
# text = w['text']
|
| 274 |
+
# # Normalize bbox to 0-1000 scale
|
| 275 |
+
# x0 = int((w['x0'] / width) * 1000)
|
| 276 |
+
# top = int((w['top'] / height) * 1000)
|
| 277 |
+
# x1 = int((w['x1'] / width) * 1000)
|
| 278 |
+
# bottom = int((w['bottom'] / height) * 1000)
|
| 279 |
+
|
| 280 |
+
# # Safety clamp
|
| 281 |
+
# box = [max(0, min(x0, 1000)), max(0, min(top, 1000)),
|
| 282 |
+
# max(0, min(x1, 1000)), max(0, min(bottom, 1000))]
|
| 283 |
+
|
| 284 |
+
# page_tokens.append(text)
|
| 285 |
+
# page_bboxes.append(box)
|
| 286 |
+
# extracted_pages.append({"page_id": page_idx, "tokens": page_tokens, "bboxes": page_bboxes})
|
| 287 |
+
|
| 288 |
+
# # B. Run Inference
|
| 289 |
+
# raw_predictions = []
|
| 290 |
+
# for page in extracted_pages:
|
| 291 |
+
# tokens = page['tokens']
|
| 292 |
+
# bboxes = page['bboxes']
|
| 293 |
+
# if not tokens: continue
|
| 294 |
+
|
| 295 |
+
# # Tokenize
|
| 296 |
+
# encoding = tokenizer(
|
| 297 |
+
# tokens,
|
| 298 |
+
# boxes=bboxes,
|
| 299 |
+
# return_tensors="pt",
|
| 300 |
+
# padding="max_length",
|
| 301 |
+
# truncation=True,
|
| 302 |
+
# max_length=512,
|
| 303 |
+
# return_offsets_mapping=True
|
| 304 |
+
# )
|
| 305 |
+
|
| 306 |
+
# input_ids = encoding.input_ids.to(device)
|
| 307 |
+
# bbox = encoding.bbox.to(device)
|
| 308 |
+
# attention_mask = encoding.attention_mask.to(device)
|
| 309 |
+
|
| 310 |
+
# # Predict
|
| 311 |
+
# with torch.no_grad():
|
| 312 |
+
# # NOTE: If your hybrid model requires 'pixel_values',
|
| 313 |
+
# # you will need to add image extraction logic above and pass it here.
|
| 314 |
+
# preds = active_model(input_ids=input_ids, bbox=bbox, attention_mask=attention_mask)
|
| 315 |
+
|
| 316 |
+
# # Check if preds returns a tuple (loss, tags) or just tags
|
| 317 |
+
# # The CRF implementation usually returns a list of lists of tags in viterbi_decode
|
| 318 |
+
# pred_tags = preds[0] if isinstance(preds, tuple) else preds[0]
|
| 319 |
+
# # Note: Standard CRF.viterbi_decode returns List[List[int]], so [0] gets the first batch item
|
| 320 |
+
|
| 321 |
+
# # Alignment
|
| 322 |
+
# word_ids = encoding.word_ids()
|
| 323 |
+
# aligned_data = []
|
| 324 |
+
# prev_word_idx = None
|
| 325 |
+
|
| 326 |
+
# for i, word_idx in enumerate(word_ids):
|
| 327 |
+
# if word_idx is None: continue
|
| 328 |
+
# if word_idx != prev_word_idx:
|
| 329 |
+
# # pred_tags is likely a list of ints.
|
| 330 |
+
# # If pred_tags[i] fails, your max_length might be cutting off tags,
|
| 331 |
+
# # or the model output shape differs from the token length.
|
| 332 |
+
# if i < len(pred_tags):
|
| 333 |
+
# label_id = pred_tags[i]
|
| 334 |
+
# label_str = ID2LABEL.get(label_id, "O")
|
| 335 |
+
# aligned_data.append({"word": tokens[word_idx], "predicted_label": label_str})
|
| 336 |
+
# prev_word_idx = word_idx
|
| 337 |
+
# raw_predictions.append({"data": aligned_data})
|
| 338 |
+
|
| 339 |
+
# # C. Convert to Structured JSON
|
| 340 |
+
# final_json = convert_bio_to_structured_json(raw_predictions)
|
| 341 |
+
|
| 342 |
+
# # Save output
|
| 343 |
+
# output_filename = "structured_output.json"
|
| 344 |
+
# with open(output_filename, "w", encoding="utf-8") as f:
|
| 345 |
+
# json.dump(final_json, f, indent=2, ensure_ascii=False)
|
| 346 |
+
|
| 347 |
+
# return output_filename, f"✅ Success! Processed {len(extracted_pages)} pages. Extracted {len(final_json)} items."
|
| 348 |
+
|
| 349 |
+
# except Exception as e:
|
| 350 |
+
# import traceback
|
| 351 |
+
# return None, f"❌ Error:\n{str(e)}\n\nTraceback:\n{traceback.format_exc()}"
|
| 352 |
+
|
| 353 |
+
# # ---------------------------------------------------------
|
| 354 |
+
# # 6. GRADIO INTERFACE
|
| 355 |
+
# # ---------------------------------------------------------
|
| 356 |
+
# iface = gr.Interface(
|
| 357 |
+
# fn=process_pdf,
|
| 358 |
+
# inputs=gr.File(label="Upload PDF", file_types=[".pdf"]),
|
| 359 |
+
# outputs=[
|
| 360 |
+
# gr.File(label="Download JSON Output"),
|
| 361 |
+
# gr.Textbox(label="Status Log", lines=10)
|
| 362 |
+
# ],
|
| 363 |
+
# title="Hybrid Model Inference: PDF to JSON",
|
| 364 |
+
# description="Upload a document to extract structured data using the custom Hybrid LayoutLMv3 model.",
|
| 365 |
+
# flagging_mode="never"
|
| 366 |
+
# )
|
| 367 |
+
|
| 368 |
+
# if __name__ == "__main__":
|
| 369 |
+
# iface.launch()
|
| 370 |
+
|
| 371 |
+
|
| 372 |
+
|
| 373 |
import gradio as gr
|
| 374 |
import torch
|
| 375 |
import torch.nn as nn
|
|
|
|
| 383 |
# ---------------------------------------------------------
|
| 384 |
# 1. CONFIGURATION
|
| 385 |
# ---------------------------------------------------------
|
|
|
|
| 386 |
MODEL_FILENAME = "layoutlmv3_bilstm_crf_hybrid.pth"
|
| 387 |
BASE_MODEL_ID = "microsoft/layoutlmv3-base"
|
| 388 |
|
| 389 |
+
# Labels: 11 Standard BIO tags + 2 Special tokens = 13 Total
|
| 390 |
+
# NOTE: If your output labels look "scrambled" (e.g., Questions detected as Options),
|
| 391 |
+
# try moving "UNK" and "PAD" to the BEGINNING of this list (indices 0 and 1).
|
| 392 |
LABELS = [
|
| 393 |
"O",
|
| 394 |
"B-QUESTION", "I-QUESTION",
|
| 395 |
"B-OPTION", "I-OPTION",
|
| 396 |
"B-ANSWER", "I-ANSWER",
|
| 397 |
"B-SECTION_HEADING", "I-SECTION_HEADING",
|
| 398 |
+
"B-PASSAGE", "I-PASSAGE",
|
| 399 |
+
"UNK", "PAD" # Added to match the 13-label count in your weights
|
| 400 |
]
|
| 401 |
+
|
| 402 |
LABEL2ID = {l: i for i, l in enumerate(LABELS)}
|
| 403 |
ID2LABEL = {i: l for l, i in LABEL2ID.items()}
|
| 404 |
|
| 405 |
device = torch.device("cuda" if torch.cuda.is_available() else "cpu")
|
| 406 |
tokenizer = LayoutLMv3TokenizerFast.from_pretrained(BASE_MODEL_ID)
|
| 407 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 408 |
# ---------------------------------------------------------
|
| 409 |
# 2. MODEL ARCHITECTURE (LayoutLMv3 + BiLSTM + CRF)
|
| 410 |
# ---------------------------------------------------------
|
|
|
|
| 413 |
super().__init__()
|
| 414 |
self.layoutlm = LayoutLMv3Model.from_pretrained(BASE_MODEL_ID)
|
| 415 |
|
| 416 |
+
# Structure derived from your error log:
|
| 417 |
+
# Weight shape [1024, 768] implies hidden_size = 256 (1024/4)
|
| 418 |
+
lstm_hidden_size = 256
|
| 419 |
|
|
|
|
|
|
|
| 420 |
self.lstm = nn.LSTM(
|
| 421 |
+
input_size=768, # LayoutLMv3 output size
|
| 422 |
+
hidden_size=lstm_hidden_size,
|
| 423 |
+
num_layers=2, # Error log showed 'l1' weights, meaning 2 layers
|
| 424 |
batch_first=True,
|
| 425 |
bidirectional=True
|
| 426 |
)
|
| 427 |
|
|
|
|
| 428 |
self.dropout = nn.Dropout(0.1)
|
| 429 |
|
| 430 |
+
# Classifier input = lstm_hidden * 2 (bidirectional) = 256 * 2 = 512
|
| 431 |
+
# This matches your error log shape [13, 512]
|
| 432 |
self.classifier = nn.Linear(lstm_hidden_size * 2, num_labels)
|
| 433 |
|
|
|
|
| 434 |
self.crf = CRF(num_labels)
|
| 435 |
|
| 436 |
def forward(self, input_ids, bbox, attention_mask, labels=None):
|
|
|
|
| 437 |
outputs = self.layoutlm(input_ids=input_ids, bbox=bbox, attention_mask=attention_mask)
|
| 438 |
+
sequence_output = outputs.last_hidden_state
|
| 439 |
|
| 440 |
+
# BiLSTM
|
| 441 |
+
lstm_output, _ = self.lstm(sequence_output)
|
|
|
|
| 442 |
|
| 443 |
+
# Classifier
|
| 444 |
lstm_output = self.dropout(lstm_output)
|
| 445 |
+
emissions = self.classifier(lstm_output)
|
| 446 |
|
|
|
|
| 447 |
if labels is not None:
|
| 448 |
+
# Training/Eval loss
|
| 449 |
log_likelihood = self.crf(emissions, labels, mask=attention_mask.bool())
|
| 450 |
return -log_likelihood.mean()
|
| 451 |
else:
|
| 452 |
+
# Inference prediction
|
| 453 |
return self.crf.viterbi_decode(emissions, mask=attention_mask.bool())
|
| 454 |
+
|
| 455 |
# ---------------------------------------------------------
|
| 456 |
+
# 3. MODEL LOADING
|
| 457 |
# ---------------------------------------------------------
|
| 458 |
model = None
|
| 459 |
|
|
|
|
| 462 |
if model is None:
|
| 463 |
print(f"🔄 Loading model from {MODEL_FILENAME}...")
|
| 464 |
if not os.path.exists(MODEL_FILENAME):
|
| 465 |
+
raise FileNotFoundError(f"❌ Model file '{MODEL_FILENAME}' not found.")
|
| 466 |
|
|
|
|
| 467 |
model = HybridModel(num_labels=len(LABELS))
|
| 468 |
|
| 469 |
+
# Load state dictionary
|
| 470 |
+
state_dict = torch.load(MODEL_FILENAME, map_location=device)
|
| 471 |
+
|
| 472 |
+
# Try loading. If labels are wrong, this will still throw a shape error.
|
| 473 |
try:
|
|
|
|
| 474 |
model.load_state_dict(state_dict)
|
| 475 |
except RuntimeError as e:
|
| 476 |
+
raise RuntimeError(f"❌ Weight mismatch! \nYour model has {len(LABELS)} labels defined in script.\nCheck if 'LABELS' list needs reordering or resizing.\nDetailed Error: {e}")
|
| 477 |
|
| 478 |
model.to(device)
|
| 479 |
model.eval()
|
|
|
|
| 481 |
return model
|
| 482 |
|
| 483 |
# ---------------------------------------------------------
|
| 484 |
+
# 4. JSON CONVERSION LOGIC
|
| 485 |
# ---------------------------------------------------------
|
| 486 |
def convert_bio_to_structured_json(predictions):
|
| 487 |
structured_data = []
|
|
|
|
| 501 |
else: item['passage'] = passage_text
|
| 502 |
passage_buffer.clear()
|
| 503 |
|
|
|
|
| 504 |
flat_predictions = []
|
| 505 |
for page in predictions:
|
| 506 |
flat_predictions.extend(page['data'])
|
|
|
|
| 508 |
for idx, item in enumerate(flat_predictions):
|
| 509 |
word = item['word']
|
| 510 |
label = item['predicted_label']
|
| 511 |
+
|
| 512 |
+
# Clean label (remove B- / I-)
|
| 513 |
entity_type = label[2:].strip() if label.startswith(('B-', 'I-')) else None
|
|
|
|
| 514 |
|
| 515 |
+
# Skip special tokens if they appear in prediction
|
| 516 |
+
if label in ["UNK", "PAD", "O"]:
|
| 517 |
+
current_text_buffer.append(word)
|
| 518 |
+
continue
|
| 519 |
+
|
| 520 |
+
current_text_buffer.append(word)
|
| 521 |
previous_entity_type = last_entity_type
|
| 522 |
is_passage_label = (entity_type == 'PASSAGE')
|
| 523 |
|
|
|
|
| 611 |
current_item['text'] = ' '.join(current_text_buffer).strip()
|
| 612 |
structured_data.append(current_item)
|
| 613 |
|
|
|
|
| 614 |
for item in structured_data:
|
| 615 |
if 'text' in item: item['text'] = re.sub(r'\s{2,}', ' ', item['text']).strip()
|
| 616 |
if 'new_passage' in item: item['new_passage'] = re.sub(r'\s{2,}', ' ', item['new_passage']).strip()
|
|
|
|
| 618 |
return structured_data
|
| 619 |
|
| 620 |
# ---------------------------------------------------------
|
| 621 |
+
# 5. PROCESSING PIPELINE
|
| 622 |
# ---------------------------------------------------------
|
| 623 |
def process_pdf(pdf_file):
|
| 624 |
if pdf_file is None:
|
|
|
|
| 627 |
try:
|
| 628 |
active_model = load_model()
|
| 629 |
|
|
|
|
| 630 |
extracted_pages = []
|
| 631 |
with pdfplumber.open(pdf_file.name) as pdf:
|
| 632 |
for page_idx, page in enumerate(pdf.pages):
|
|
|
|
| 638 |
|
| 639 |
for w in words_data:
|
| 640 |
text = w['text']
|
|
|
|
| 641 |
x0 = int((w['x0'] / width) * 1000)
|
| 642 |
top = int((w['top'] / height) * 1000)
|
| 643 |
x1 = int((w['x1'] / width) * 1000)
|
| 644 |
bottom = int((w['bottom'] / height) * 1000)
|
|
|
|
|
|
|
| 645 |
box = [max(0, min(x0, 1000)), max(0, min(top, 1000)),
|
| 646 |
max(0, min(x1, 1000)), max(0, min(bottom, 1000))]
|
|
|
|
| 647 |
page_tokens.append(text)
|
| 648 |
page_bboxes.append(box)
|
| 649 |
extracted_pages.append({"page_id": page_idx, "tokens": page_tokens, "bboxes": page_bboxes})
|
| 650 |
|
|
|
|
| 651 |
raw_predictions = []
|
| 652 |
for page in extracted_pages:
|
| 653 |
tokens = page['tokens']
|
| 654 |
bboxes = page['bboxes']
|
| 655 |
if not tokens: continue
|
| 656 |
|
|
|
|
| 657 |
encoding = tokenizer(
|
| 658 |
tokens,
|
| 659 |
boxes=bboxes,
|
|
|
|
| 668 |
bbox = encoding.bbox.to(device)
|
| 669 |
attention_mask = encoding.attention_mask.to(device)
|
| 670 |
|
|
|
|
| 671 |
with torch.no_grad():
|
| 672 |
+
# Get the tag indices from the CRF layer
|
| 673 |
+
pred_tags = active_model(input_ids=input_ids, bbox=bbox, attention_mask=attention_mask)
|
| 674 |
+
# If batch size is 1, pred_tags is a list of lists: [[tags...]]
|
| 675 |
+
pred_tags = pred_tags[0]
|
|
|
|
|
|
|
|
|
|
|
|
|
| 676 |
|
|
|
|
| 677 |
word_ids = encoding.word_ids()
|
| 678 |
aligned_data = []
|
| 679 |
prev_word_idx = None
|
|
|
|
| 681 |
for i, word_idx in enumerate(word_ids):
|
| 682 |
if word_idx is None: continue
|
| 683 |
if word_idx != prev_word_idx:
|
|
|
|
|
|
|
|
|
|
| 684 |
if i < len(pred_tags):
|
| 685 |
label_id = pred_tags[i]
|
| 686 |
+
# Safe retrieval of label string
|
| 687 |
label_str = ID2LABEL.get(label_id, "O")
|
| 688 |
aligned_data.append({"word": tokens[word_idx], "predicted_label": label_str})
|
| 689 |
prev_word_idx = word_idx
|
| 690 |
raw_predictions.append({"data": aligned_data})
|
| 691 |
|
|
|
|
| 692 |
final_json = convert_bio_to_structured_json(raw_predictions)
|
| 693 |
|
|
|
|
| 694 |
output_filename = "structured_output.json"
|
| 695 |
with open(output_filename, "w", encoding="utf-8") as f:
|
| 696 |
json.dump(final_json, f, indent=2, ensure_ascii=False)
|
|
|
|
| 711 |
gr.File(label="Download JSON Output"),
|
| 712 |
gr.Textbox(label="Status Log", lines=10)
|
| 713 |
],
|
| 714 |
+
title="LayoutLMv3 + BiLSTM Hybrid Model Inference",
|
| 715 |
description="Upload a document to extract structured data using the custom Hybrid LayoutLMv3 model.",
|
| 716 |
flagging_mode="never"
|
| 717 |
)
|