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Upload example.fasta
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example.fasta
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| 1 |
+
>NC_034616.1 |Human papillomavirus type 85 isolate 114B, complete genome
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| 2 |
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CTTATACTTTTTTATAATTTTATTACTGAAAAGGGTGTAACCGAAAACGGTCATGACCGA
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| 3 |
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AATCGGTGCATATATATAACCCAGCTTACAGTACATGTAATAGGATGGCTGAATTTGGCA
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| 4 |
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ATCCAGCTACCCGACCCTACAAACTACCAGACCTATGCAACACACTGGACACATCACTGC
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| 5 |
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AAGATATAGAAATAAGCTGTGTATATTGTAAAAGCGTCCTGCAGCGAACAGAGGTATATG
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| 6 |
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AATTTGCCTTTGCTGATTTATTTGTAGTATATAGAGACGGTATACCATATGCAGCATGTC
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| 7 |
+
AGAACTGTTTAATGTTTTATTCTAAAATAAGAGAACTAAGATATTATAGCGACTCTGTGT
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| 8 |
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ATGGGGAAACGTTAGAAAAACTAACAAATAGCAATATATATGATATATTAATAAGGTGTT
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| 9 |
+
TACGGTGTCAAAAACCTTTATGTCCGGCAGAAAAACTAAAACACCTTAATGAAAAACGAA
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| 10 |
+
GATTCCATAAAATAGCAGGGAAATATAGAGGACAGTGTCGCCGGTGCATGACGCGTGCAC
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| 11 |
+
AAGAACAGCAAGGCAGCCGCAGAGAAACACAAGTATAAGGGTCGCTATGCATGGACCAAA
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| 12 |
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ACCTACTGTACATGACATTGTGTTAGATTTGGAACCATATAATGAAGTGCAAGAGGTTGA
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| 13 |
+
CCTGTATTGCTATGAGGAATTAAACAACTCAGAGGAAGAAATAGATGAACCAGATAATGC
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| 14 |
+
AATTAATCACCGACAACCACTACTAGCCAGACGAGAAGAACTACAGCGTCACACTATTTG
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| 15 |
+
CTGCGTGTGTTGTAAATGTGAGGCCAGTCTGCAGTTAGTGGTGGAAAGTTCAGCAGCCGA
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| 16 |
+
TCTACGAGATCTCCAGCAGCTGTTTTTGGGCACGCTATCATTTTTGTGTCCACTGTGTGC
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| 17 |
+
AGTACTGCGGTAAGCTGCAATGGCCGACCCTGAAGGTACAGATGGGGATGGGACGGGATG
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| 18 |
+
TAATGGTTGGTTTTTTGTGCAGGCAATAGTAGACAAAAAAACAGGTGACACCATATCAGA
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| 19 |
+
GGATGAGGACGAGGACGGGACAGATACAGGTTCAGACTTGGTAGATTTTATTGACACTAG
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| 20 |
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TAATACAAATTATATGCAGGCAGATAGAGAGGCAGCACAAGCGCTATTACATGCACAGGA
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| 21 |
+
AGTAGAAACTGATACAAAGCTATTACATGCCTTAAAACGAAAGTATGGAGCACACAGCAC
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| 22 |
+
AGAAAACAGTCCATGTCGTGATACAGCAAGTATACATAGCAATTTAAGCTCACCATTACA
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| 23 |
+
AGAAATATCGTTAAATAGCTATAATAATACAGCTAAACGAAGGCTGTGTTCAGTGCCAGA
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| 24 |
+
CAGCGGCTATGGCAATACTCAAGTGGAAACTCTGCAGACTCAGGTAACCCTAGATACAAA
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| 25 |
+
TGTGTTTGGGGATGGGAAAAATGGCGACGGTTTAAATAGTGAGGCATGTAGTACAGATAA
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| 26 |
+
TGAAATGGATATAGAAAATCAAAATCCAAACTCACCAATGACACAAATTGTGTCCTTATT
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| 27 |
+
AAAAGTAAATAATAAAAAAGCAGCAATATTGGCTAAATTTAAAGAAACATATGGATTGTC
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| 28 |
+
ATTTACAGATTTGGTACGAACATTTAAAAGTGATAAAACAACATGTACAGATTGGGTAGC
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| 29 |
+
CGCTATTTGTGGAGTAAATCCAAATATTGCAGAAGGATTTAAAACGTTAATACAACCATA
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| 30 |
+
TGTGTTATATGCACATATACAATGCATGGATTGTTCATGGGGAGTATTTATATTAGCTTT
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| 31 |
+
ATTAAGATATAAATGTGGCAAAAATAGACTAACTGTAGCTAAAGNNNNNNGTACATTACT
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| 32 |
+
ACATGTACCAGATACCCATATGTTAATTGAGCCACCAAAACTGCGTAGCAGTGTTGCAGC
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| 33 |
+
ACTATATTGGTATAGGACAGGAATATCAAATATTAGTGAAGTAACAGGAGACACACCTGA
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| 34 |
+
GTGGATACAAAGACAAACTATTATACAACATGGTATAGATGACAGTGTATTTGACCTGTC
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| 35 |
+
AGAAATGATACAGTGGGCGTTTGATAATGACTATATAGATGAAAGTGACATAGCATATGA
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| 36 |
+
ATATGCACAGTTAGCTGATTGTAATAGTAATGCAGCAGCATTTTTAAAAAGTAATTGTCA
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| 37 |
+
AGCTAAATACTTACGAGATTGTGCAGTTATGTGTAGACATTATAAAAGGGCACAACGAAA
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| 38 |
+
GCANNNNNNNNNNNNNNNNNNNNNNNGTTATAGATGTGACAAAATTGATGATGGAGGTGA
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| 39 |
+
TTGGAAACCTATTGTACAATTTTTAAGATTTCAAGGAATAGAGTTTATTACATTTTTAAG
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| 40 |
+
AGCATTTAAAGACTTTTTAAAAGGAACACCAAAAAAAAATTGTATTGTTATATATGGACC
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| 41 |
+
AGCAAATACAGGCAAATCATATTTTTGTATGAGTCTTATACAATTTTTACATGGTACAGT
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| 42 |
+
GTTGTCATTTGTAAATTCAAACAGCCATTTTTGGCTGGAACCGTTAACAGACACTAAGAT
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| 43 |
+
AGCTATGGTAGATGATGCAACACCAACATGCTGGTCCTATTTTGATAATTATATGAGAAA
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| 44 |
+
TGCATTAGATGGCAATCCAATAAGTATAGATAGAAAACATAAACATTTAATACAAATGAA
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| 45 |
+
GTGTCCACCAATGCTAATTACATCTAATACAAATCCTGCAACAGATGATAGATGGCCTTA
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| 46 |
+
TTTACGAAGTAGGGTAACAGTATTTACATTTCCACATACATTTCCATTTGATAGCAATGG
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| 47 |
+
CAATCCAGTGTATGACATAAATGATAAAAATTGGAAATGTTTCTTTAAAAGGACGTGGTC
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| 48 |
+
CAGATTAGATTTGCACCAGGAAGAGGAGGATACAGAAAATGATGGATGCCCTATCCCAAC
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| 49 |
+
GTTTAAATGTGTTACAGGAAAAGATTCTAGAACATTACGAGACTGATAGTACAGACATAT
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| 50 |
+
GTGATCAAATAGACTATTGGAAGTGTGTACGTCTGGAAAATGCAATATATTATGCAGCAA
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| 51 |
+
GGGAGCATGGTCTTAAAACAATAAACCACCACGTGGTACCAACATTTCAAATTTCAAAAA
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| 52 |
+
GCAAAGCACATGAAGCAATTGAACTGCAGATGGCACTAGAGAGTCTTGCTAAATCAGAGT
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| 53 |
+
TTAAAAATGAACTGTGGACATTGCAAGATACGTGCCAAGAACTATATCAAACACCTCCAC
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| 54 |
+
AACAGTGTTTTAAAAAACAGGGACAAACCGTTGAAGTACGGTATGATGGAGACAAAGACA
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| 55 |
+
ATACTATGCATTATACATCTTGGGACTATATATATTATGTAACAGAAGGTGATAAGTGGT
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| 56 |
+
GTAAAACCAAAGGTTATGTGAATTATTGTGGATTGTATTATATAAAGGAGGGACAACAAA
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| 57 |
+
CATATTATGTACAGTTTAAATGTGATGCACAACAATATGGACAGAGCGGTAAATGGGAAG
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| 58 |
+
TGTGGTATAATGGTAAAAAAATTGAATGTGTAAATACCTGTGACAAAATAATACAATGTT
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| 59 |
+
CTGAATCTATGTACAGTACCTGTGACGAGACAGTATCCGCTACTGCAATTGCTAGAGAAT
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| 60 |
+
TACAACACCCCACCACACCGTATACCGAAGCCACCACCGTGTGCACCCAAAAGAGTGGGG
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| 61 |
+
GTTCGGCGCCGACTAGAAAACCATTCAGACATTGTGGATTCACAGAAACAAGTGAAGTCG
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| 62 |
+
ACGGACTGTCCGTGGACCACCTCAACAACCCCCTGCTTAGTGCACCTGCAGGCAACAACG
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| 63 |
+
GGTTCAGGAAGCACAATAGTGGTGACACTACGCCTATAGTGCACCTAAAAGGTGATAAAA
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| 64 |
+
ATAGATTAAAGTGTTTGCGATACAGGCTACAAAAGTTCCATAATTTATATACACAAATAT
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| 65 |
+
CATGTACGTGGCATTGGATAGGTGGTAAAGAAACAACAAGGACTGGTATNNNNNNNNNNN
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| 66 |
+
NNNATGCAAATGAAACCCAAAGACAAAAATTTTTGGATGTTGTAAAAATACCTAATACTG
|
| 67 |
+
TTAATGTATCCCTTGGTTATATGACATTGTAATAGGGGTATGTTAATTGCTGTATTTTTG
|
| 68 |
+
TTGTGCTTTTGTGTGTGCCTATATGTGTGTTGCACTATTCCGCTTTTTCCTGCTACTAAT
|
| 69 |
+
GTGTGTGCGCATGCTTGGCTACTTGTGTTTTTGTTAATAGTTTTTATTACTACCCCTTTT
|
| 70 |
+
ACTGCATTTATTGTATATATATTTTTTTTTATATTGCCAATGTTTTTATTGCATTTGCAC
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| 71 |
+
AGTGTAAATACATTTGACTAAGTACTATATAACCTGTATTGTACAGGACATTACATTGGT
|
| 72 |
+
AGTGTAATACCTTTTTGTAATAAACATGGTATCCCATCGTGCTGCCCGTCGAAAGCGTGC
|
| 73 |
+
ATCTGCAACGGATTTGTATAAAACATGTAAACAATCGGGTACATGCCCTCCAGATGTTAT
|
| 74 |
+
TAATAAGGTTGAAGGTACTACTCTTGCAGATAAACTATTACAATGGACTAGTTTGGGAAT
|
| 75 |
+
ATTTTTAGGAGGCCTTGGAATAGGTACTGGTAGTGGCACAGGGGGGCGTACCGGCTATAT
|
| 76 |
+
TCCATTGGGTGGCAGACCTAATACTGTTGTTGATGTGTCTCCTGCAAGGCCACCTGTTGT
|
| 77 |
+
AATTGAATCTGTGGGGCCTTCAGATCCATCTATTGTTACATTAGTTGAAGAGTCCAGTAT
|
| 78 |
+
TGTTACATCTGGAGCTCCTGTTCCTACATTTACAGGCACATCTGGATTTGAAATTACATC
|
| 79 |
+
CTCTGCAACAACCACCCCTGCAGTATTAGACATTACACCTGCTTCTGGGTCTGTGCAACT
|
| 80 |
+
AAGTAGCACTAGTTTTACCAATCCTGCATTTACCGACCCTTCGGTTATTGAGGTTCCTCA
|
| 81 |
+
AACAGGGGAGGTGTCTGGAGATATTTTTATTACTACCCCTACATCTGGGACACATGGATA
|
| 82 |
+
CGAGGAAATTCCAATGCACACATTTGCAACACAGGGCAGAGGCACCGAACCTATTAGTAG
|
| 83 |
+
TACCCCTATTCCTGGTGTTAGGCGTGTGGCAGGACCTAGATTATATAGTCAAGCTTATCA
|
| 84 |
+
ACAAGTTAAAATAACTAATTCAGACTTTATATCCCGTCCATCTACGTTGGTTACATTTAC
|
| 85 |
+
CAATCCTGCATATGAGCCTATAGACACTACATTAACCTTTTCACCACAGGATGTTGTGCC
|
| 86 |
+
TGATCCTGATTTTATGGATATTGTTCGTTTACATAGGCCTGCCTTAACATCCAGACGTGG
|
| 87 |
+
TACAGTTAGATTTAGTAGATTGGGTAAAAAACTAACTATGTCTACTCGCAGTGGTAAACA
|
| 88 |
+
AATAGGTGCCCAGGTGCATTATTATCATGATATTAGTCCTATTTNNNNNNNNNNNNNNNG
|
| 89 |
+
TATTGAAATGCAGCCTTTACTGCCTGATGCAGCAGTTACTGCTGACACTAATGGCCTCTT
|
| 90 |
+
TGACATTTATGCTGACACTGATATTGATAATAATGCCATGCTATATGATAGAAATATTTC
|
| 91 |
+
TGATGTTACACAACCTACCACTTCAACTATATCTAGTGTATCCTCTCGTTATAGTAATAC
|
| 92 |
+
TACTATTCCTTTAGCAACATCTTGGGATGTTCCTGTTCATACAGGGCCTGACATGACATT
|
| 93 |
+
ACCTACTACTATACCCCAGTGGCCTAATATAGTACCTTTACTGCCTAATAATACACATTC
|
| 94 |
+
AGTTGTACTTCAGGGAACAAACTATTATTTATGGCCTAATTATTATTTTATTTTCAAAAA
|
| 95 |
+
ACGTAAACGTGTTCCCTATTTTCTTACAGATGGCTTTGTGGCGTTCTAGTGACAGCAAGG
|
| 96 |
+
TATACCTTCCACCACCTTCAGTGGCTAAAGTTGTCAACACAGACGATTATGTAACACGTA
|
| 97 |
+
CCAGTACATTTTATCATGCTGGCAGCTCTAGGCTTCTAACCGTTGGACATCCATACTATA
|
| 98 |
+
AAGTTACCTCAAATGGAGGCCGCAAGCAAGACATTCCTAAAGTGTCTGCCTATCAGTATC
|
| 99 |
+
GAGTGTTTCGGGTTACATTACCTGACCCTAATAAATTTGGTCTTCCAGACACTAATATAT
|
| 100 |
+
ATAATCCTGAAACACAACGTTTAGTATGGGCCTGTGTTGGCATGGAGGTAGGTCGTGGGC
|
| 101 |
+
AGCCTTTAGGTGTTAGCCTTAGTGGTCATCCCTTTTACAACAAATTGGATGACACAGAAA
|
| 102 |
+
ATTCCCATGTTGCTACTTCTGTAGTTACACACGACACTAGAGATAATGTGTCAGTGGATT
|
| 103 |
+
ATAAACAAACCCAGTTATGTATTATTGGTTGTGTTCCTGCTATTGGGGAACATTGGGCTA
|
| 104 |
+
AGGGTACTGCCTGTAAGCCCGGTGCTGTGCAAACAGGTGACTGTCCTCCATTAGAACTAG
|
| 105 |
+
TAAATACACCTATTGAGGATGGTGATATGATTGATACTGGCTATGGTGCTATGGACTTTA
|
| 106 |
+
GTACTTTGCAGGATAATAAAAGTGAGGTTCCCTTAGACATTTGTCAATCTATTTGTAAAT
|
| 107 |
+
ATCCAGACTATTTGCAAATGTCTGCAGATGCATATGGGGACAGTATGTTTTTTTGTTTAC
|
| 108 |
+
GACGCGAACAGTTATTTGCACGCCATTTTTGGAACAGGGGAGGCACTATAGGAGATGCAG
|
| 109 |
+
TACCGGAAACATTATATATAAAAGGTACTAATGATAGGGCAACACCTGGAAGCTGTATTT
|
| 110 |
+
ATTCTCCATCACCTAGTGGGTCTATGGTATCTTCAGATGCACAAATGTTTAATAAGCCTT
|
| 111 |
+
ATTGGCTGCACAAAGCCCAGGGACAAAATAATGGCATTTGCTGGCACAACCAATTATTTA
|
| 112 |
+
TAACTGTGGTAGACACAACACGTAGTACCAATCTTACCTTATCTACTGCAACTACTAATC
|
| 113 |
+
CAGTTCCATCTATATATGAACCTTCTAAATTTAAGGAATACACACGCCATGTAGAGGAAT
|
| 114 |
+
ATGATTTACAATTTATATTTCAATTGTGTAAAATTACACTTACTACTGATGTTATGTCTT
|
| 115 |
+
ATATACATAACATGGATCCTACTATTTTAGATAGTTGGAATTTTGGTGTTAGTCCTCCCC
|
| 116 |
+
CATCTGCTAGCTTAGTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
|
| 117 |
+
NNNNNGTGGTTGTTCCACAAAAAAAGGATCCATATGAAAAATTAAAGTTTTGGAATGTGG
|
| 118 |
+
ATCTTAAAGAACATTTTTCATCTGATTTAGATCAGTTTCCTTTAGGACGTAAGTTTTTAT
|
| 119 |
+
TACAGGCTGGGTTACGACCTAAACNNNCCATAGGCCCTAGGAAACGTGTTGCTTCTACTT
|
| 120 |
+
CTACTGCTACTAGGCCCTCCAAACGGAAACGTACTGCTAAATAATGTGTTGTGTATAATT
|
| 121 |
+
GTGTTGTTTGTTTTGTTATATGTGTGTTCCTTATATGTTGTGTGCATGTTTGTATGGTTA
|
| 122 |
+
TGTGTATGTTTGTATCATGTGTAAGTAATGTGTGTATTGTATGTGTTTAATAAAGTATGT
|
| 123 |
+
GTGTTAGTTTCGTGTGTGGTTGCACCCAAATGAGTAAGAGACTGTCCCTTTATTATCCCT
|
| 124 |
+
TGTATCCTGTGTATCCTGTGTGCCCTTTGTTCCTACTTTATATAGGGTGTGTTATATGTT
|
| 125 |
+
ATACATTATTTATAATACACTTTGTAGCGTCCATTTTATCCATTTGTATCCTACAAGCCT
|
| 126 |
+
CCATTTTACTATGCAACCGATATCGGTTGCCTTTGACACACCTAACATTATACATTCTTA
|
| 127 |
+
TTGTTACATTATTTAAAGTTAAATCCTTTTTGGCTCTGTTTAAGGCGCCAGTGAGCCAGT
|
| 128 |
+
GGCGCACCTTATATTACTCATCATCCTGTCCAGGTGCACTGCAACAATGGTTTGCAAAAC
|
| 129 |
+
CTTGTTTTACCCTTACATAATAAAACTGCTTTTAGGCACATATTTTCACTGTTTTTACTT
|
| 130 |
+
GCTTTAATTACACTATTGGCCTGTACAACTACTTTTAGATTCAAGAATGTGTCTTGTAGG
|
| 131 |
+
TTATATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATCCTT
|
| 132 |
+
ACACATTATATA
|
| 133 |
+
|