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Update app.py
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app.py
CHANGED
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@@ -93,12 +93,11 @@ def calculate_shap_values(model, x_tensor):
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background = torch.zeros((300, x_tensor.shape[1]), device=device)
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explainer = shap.DeepExplainer(model, background)
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shap_values_all = explainer.shap_values(x_tensor)
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#
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shap_values = shap_values_all[1][0]
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except Exception as e:
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print(f"DeepExplainer failed, falling back to KernelExplainer: {str(e)}")
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# Define a wrapper that ensures input is a 2D tensor
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def model_predict(x):
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if not isinstance(x, np.ndarray):
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x = np.array(x)
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@@ -107,17 +106,19 @@ def calculate_shap_values(model, x_tensor):
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with torch.no_grad():
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tensor_x = torch.tensor(x, dtype=torch.float, device=device)
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output = model(tensor_x)
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probs = torch.softmax(output, dim=1)[:, 1]
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return probs.cpu().numpy()
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# Use a numpy background
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background = np.zeros((300, x_tensor.shape[1]))
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explainer = shap.KernelExplainer(model_predict, background)
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x_numpy = x_tensor.cpu().numpy()
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# Increase nsamples to 1000 to provide enough data for regression
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shap_values = explainer.shap_values(x_numpy, nsamples=1000)
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# Get human probability from
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with torch.no_grad():
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output = model(x_tensor)
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probs = torch.softmax(output, dim=1)
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@@ -125,6 +126,7 @@ def calculate_shap_values(model, x_tensor):
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return np.array(shap_values), prob_human
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###############################################################################
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# 4. PER-BASE SHAP AGGREGATION
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###############################################################################
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background = torch.zeros((300, x_tensor.shape[1]), device=device)
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explainer = shap.DeepExplainer(model, background)
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shap_values_all = explainer.shap_values(x_tensor)
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# For binary classification, use the second output and then the first sample
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shap_values = shap_values_all[1][0]
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except Exception as e:
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print(f"DeepExplainer failed, falling back to KernelExplainer: {str(e)}")
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def model_predict(x):
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if not isinstance(x, np.ndarray):
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x = np.array(x)
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with torch.no_grad():
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tensor_x = torch.tensor(x, dtype=torch.float, device=device)
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output = model(tensor_x)
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probs = torch.softmax(output, dim=1)[:, 1]
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return probs.cpu().numpy()
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# Use a numpy background for KernelExplainer
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background = np.zeros((300, x_tensor.shape[1]))
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explainer = shap.KernelExplainer(model_predict, background)
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x_numpy = x_tensor.cpu().numpy()
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shap_values = explainer.shap_values(x_numpy, nsamples=1000)
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# If KernelExplainer returns a list, take its first element.
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if isinstance(shap_values, list):
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shap_values = shap_values[0]
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# Get human probability from model prediction
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with torch.no_grad():
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output = model(x_tensor)
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probs = torch.softmax(output, dim=1)
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return np.array(shap_values), prob_human
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###############################################################################
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# 4. PER-BASE SHAP AGGREGATION
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###############################################################################
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