# https://github.com/LeeJunHyun/Image_Segmentation import torch import torch.nn as nn import torch.nn.functional as F from torch.nn import init def init_weights(net, init_type='normal', gain=0.02): def init_func(m): classname = m.__class__.__name__ if hasattr(m, 'weight') and (classname.find('Conv') != -1 or classname.find('Linear') != -1): if init_type == 'normal': init.normal_(m.weight.data, 0.0, gain) elif init_type == 'xavier': init.xavier_normal_(m.weight.data, gain=gain) elif init_type == 'kaiming': init.kaiming_normal_(m.weight.data, a=0, mode='fan_in') elif init_type == 'orthogonal': init.orthogonal_(m.weight.data, gain=gain) else: raise NotImplementedError('initialization method [%s] is not implemented' % init_type) if hasattr(m, 'bias') and m.bias is not None: init.constant_(m.bias.data, 0.0) elif classname.find('BatchNorm2d') != -1: init.normal_(m.weight.data, 1.0, gain) init.constant_(m.bias.data, 0.0) print('initialize network with %s' % init_type) net.apply(init_func) class conv_block(nn.Module): def __init__(self,ch_in,ch_out): super(conv_block,self).__init__() self.conv = nn.Sequential( nn.Conv2d(ch_in, ch_out, kernel_size=3,stride=1,padding=1,bias=True), nn.BatchNorm2d(ch_out), nn.ReLU(inplace=True), nn.Conv2d(ch_out, ch_out, kernel_size=3,stride=1,padding=1,bias=True), nn.BatchNorm2d(ch_out), nn.ReLU(inplace=True) ) def forward(self,x): x = self.conv(x) return x class up_conv(nn.Module): def __init__(self,ch_in,ch_out): super(up_conv,self).__init__() self.up = nn.Sequential( nn.Upsample(scale_factor=2), nn.Conv2d(ch_in,ch_out,kernel_size=3,stride=1,padding=1,bias=True), nn.BatchNorm2d(ch_out), nn.ReLU(inplace=True) ) def forward(self,x): x = self.up(x) return x class Recurrent_block(nn.Module): def __init__(self,ch_out,t=2): super(Recurrent_block,self).__init__() self.t = t self.ch_out = ch_out self.conv = nn.Sequential( nn.Conv2d(ch_out,ch_out,kernel_size=3,stride=1,padding=1,bias=True), nn.BatchNorm2d(ch_out), nn.ReLU(inplace=True) ) def forward(self,x): for i in range(self.t): if i==0: x1 = self.conv(x) x1 = self.conv(x+x1) return x1 class RRCNN_block(nn.Module): def __init__(self,ch_in,ch_out,t=2): super(RRCNN_block,self).__init__() self.RCNN = nn.Sequential( Recurrent_block(ch_out,t=t), Recurrent_block(ch_out,t=t) ) self.Conv_1x1 = nn.Conv2d(ch_in,ch_out,kernel_size=1,stride=1,padding=0) def forward(self,x): x = self.Conv_1x1(x) x1 = self.RCNN(x) return x+x1 class single_conv(nn.Module): def __init__(self,ch_in,ch_out): super(single_conv,self).__init__() self.conv = nn.Sequential( nn.Conv2d(ch_in, ch_out, kernel_size=3,stride=1,padding=1,bias=True), nn.BatchNorm2d(ch_out), nn.ReLU(inplace=True) ) def forward(self,x): x = self.conv(x) return x class Attention_block(nn.Module): def __init__(self,F_g,F_l,F_int): super(Attention_block,self).__init__() self.W_g = nn.Sequential( nn.Conv2d(F_g, F_int, kernel_size=1,stride=1,padding=0,bias=True), nn.BatchNorm2d(F_int) ) self.W_x = nn.Sequential( nn.Conv2d(F_l, F_int, kernel_size=1,stride=1,padding=0,bias=True), nn.BatchNorm2d(F_int) ) self.psi = nn.Sequential( nn.Conv2d(F_int, 1, kernel_size=1,stride=1,padding=0,bias=True), nn.BatchNorm2d(1), nn.Sigmoid() ) self.relu = nn.ReLU(inplace=True) def forward(self,g,x): g1 = self.W_g(g) x1 = self.W_x(x) psi = self.relu(g1+x1) psi = self.psi(psi) return x*psi class U_Net(nn.Module): def __init__(self,img_ch=3,output_ch=1): super(U_Net,self).__init__() self.Maxpool = nn.MaxPool2d(kernel_size=2,stride=2) self.Conv1 = conv_block(ch_in=img_ch,ch_out=64) self.Conv2 = conv_block(ch_in=64,ch_out=128) self.Conv3 = conv_block(ch_in=128,ch_out=256) self.Conv4 = conv_block(ch_in=256,ch_out=512) self.Conv5 = conv_block(ch_in=512,ch_out=1024) self.Up5 = up_conv(ch_in=1024,ch_out=512) self.Up_conv5 = conv_block(ch_in=1024, ch_out=512) self.Up4 = up_conv(ch_in=512,ch_out=256) self.Up_conv4 = conv_block(ch_in=512, ch_out=256) self.Up3 = up_conv(ch_in=256,ch_out=128) self.Up_conv3 = conv_block(ch_in=256, ch_out=128) self.Up2 = up_conv(ch_in=128,ch_out=64) self.Up_conv2 = conv_block(ch_in=128, ch_out=64) self.Conv_1x1 = nn.Conv2d(64,output_ch,kernel_size=1,stride=1,padding=0) def forward(self,x): # encoding path x1 = self.Conv1(x) x2 = self.Maxpool(x1) x2 = self.Conv2(x2) x3 = self.Maxpool(x2) x3 = self.Conv3(x3) x4 = self.Maxpool(x3) x4 = self.Conv4(x4) x5 = self.Maxpool(x4) x5 = self.Conv5(x5) # decoding + concat path d5 = self.Up5(x5) d5 = torch.cat((x4,d5),dim=1) d5 = self.Up_conv5(d5) d4 = self.Up4(d5) d4 = torch.cat((x3,d4),dim=1) d4 = self.Up_conv4(d4) d3 = self.Up3(d4) d3 = torch.cat((x2,d3),dim=1) d3 = self.Up_conv3(d3) d2 = self.Up2(d3) d2 = torch.cat((x1,d2),dim=1) d2 = self.Up_conv2(d2) d1 = self.Conv_1x1(d2) return d1 class R2U_Net(nn.Module): def __init__(self,img_ch=3,output_ch=1,t=2): super(R2U_Net,self).__init__() self.Maxpool = nn.MaxPool2d(kernel_size=2,stride=2) self.Upsample = nn.Upsample(scale_factor=2) self.RRCNN1 = RRCNN_block(ch_in=img_ch,ch_out=64,t=t) self.RRCNN2 = RRCNN_block(ch_in=64,ch_out=128,t=t) self.RRCNN3 = RRCNN_block(ch_in=128,ch_out=256,t=t) self.RRCNN4 = RRCNN_block(ch_in=256,ch_out=512,t=t) self.RRCNN5 = RRCNN_block(ch_in=512,ch_out=1024,t=t) self.Up5 = up_conv(ch_in=1024,ch_out=512) self.Up_RRCNN5 = RRCNN_block(ch_in=1024, ch_out=512,t=t) self.Up4 = up_conv(ch_in=512,ch_out=256) self.Up_RRCNN4 = RRCNN_block(ch_in=512, ch_out=256,t=t) self.Up3 = up_conv(ch_in=256,ch_out=128) self.Up_RRCNN3 = RRCNN_block(ch_in=256, ch_out=128,t=t) self.Up2 = up_conv(ch_in=128,ch_out=64) self.Up_RRCNN2 = RRCNN_block(ch_in=128, ch_out=64,t=t) self.Conv_1x1 = nn.Conv2d(64,output_ch,kernel_size=1,stride=1,padding=0) def forward(self,x): # encoding path x1 = self.RRCNN1(x) x2 = self.Maxpool(x1) x2 = self.RRCNN2(x2) x3 = self.Maxpool(x2) x3 = self.RRCNN3(x3) x4 = self.Maxpool(x3) x4 = self.RRCNN4(x4) x5 = self.Maxpool(x4) x5 = self.RRCNN5(x5) # decoding + concat path d5 = self.Up5(x5) d5 = torch.cat((x4,d5),dim=1) d5 = self.Up_RRCNN5(d5) d4 = self.Up4(d5) d4 = torch.cat((x3,d4),dim=1) d4 = self.Up_RRCNN4(d4) d3 = self.Up3(d4) d3 = torch.cat((x2,d3),dim=1) d3 = self.Up_RRCNN3(d3) d2 = self.Up2(d3) d2 = torch.cat((x1,d2),dim=1) d2 = self.Up_RRCNN2(d2) d1 = self.Conv_1x1(d2) return d1 class AttU_Net(nn.Module): def __init__(self,img_ch=3,output_ch=1): super(AttU_Net,self).__init__() self.Maxpool = nn.MaxPool2d(kernel_size=2,stride=2) self.Conv1 = conv_block(ch_in=img_ch,ch_out=64) self.Conv2 = conv_block(ch_in=64,ch_out=128) self.Conv3 = conv_block(ch_in=128,ch_out=256) self.Conv4 = conv_block(ch_in=256,ch_out=512) self.Conv5 = conv_block(ch_in=512,ch_out=1024) self.Up5 = up_conv(ch_in=1024,ch_out=512) self.Att5 = Attention_block(F_g=512,F_l=512,F_int=256) self.Up_conv5 = conv_block(ch_in=1024, ch_out=512) self.Up4 = up_conv(ch_in=512,ch_out=256) self.Att4 = Attention_block(F_g=256,F_l=256,F_int=128) self.Up_conv4 = conv_block(ch_in=512, ch_out=256) self.Up3 = up_conv(ch_in=256,ch_out=128) self.Att3 = Attention_block(F_g=128,F_l=128,F_int=64) self.Up_conv3 = conv_block(ch_in=256, ch_out=128) self.Up2 = up_conv(ch_in=128,ch_out=64) self.Att2 = Attention_block(F_g=64,F_l=64,F_int=32) self.Up_conv2 = conv_block(ch_in=128, ch_out=64) self.Conv_1x1 = nn.Conv2d(64,output_ch,kernel_size=1,stride=1,padding=0) def forward(self,x): # encoding path x1 = self.Conv1(x) x2 = self.Maxpool(x1) x2 = self.Conv2(x2) x3 = self.Maxpool(x2) x3 = self.Conv3(x3) x4 = self.Maxpool(x3) x4 = self.Conv4(x4) x5 = self.Maxpool(x4) x5 = self.Conv5(x5) # decoding + concat path d5 = self.Up5(x5) x4 = self.Att5(g=d5,x=x4) d5 = torch.cat((x4,d5),dim=1) d5 = self.Up_conv5(d5) d4 = self.Up4(d5) x3 = self.Att4(g=d4,x=x3) d4 = torch.cat((x3,d4),dim=1) d4 = self.Up_conv4(d4) d3 = self.Up3(d4) x2 = self.Att3(g=d3,x=x2) d3 = torch.cat((x2,d3),dim=1) d3 = self.Up_conv3(d3) d2 = self.Up2(d3) x1 = self.Att2(g=d2,x=x1) d2 = torch.cat((x1,d2),dim=1) d2 = self.Up_conv2(d2) d1 = self.Conv_1x1(d2) return d1 class R2AttU_Net(nn.Module): def __init__(self,img_ch=3,output_ch=1,t=2): super(R2AttU_Net,self).__init__() self.Maxpool = nn.MaxPool2d(kernel_size=2,stride=2) self.Upsample = nn.Upsample(scale_factor=2) self.RRCNN1 = RRCNN_block(ch_in=img_ch,ch_out=64,t=t) self.RRCNN2 = RRCNN_block(ch_in=64,ch_out=128,t=t) self.RRCNN3 = RRCNN_block(ch_in=128,ch_out=256,t=t) self.RRCNN4 = RRCNN_block(ch_in=256,ch_out=512,t=t) self.RRCNN5 = RRCNN_block(ch_in=512,ch_out=1024,t=t) self.Up5 = up_conv(ch_in=1024,ch_out=512) self.Att5 = Attention_block(F_g=512,F_l=512,F_int=256) self.Up_RRCNN5 = RRCNN_block(ch_in=1024, ch_out=512,t=t) self.Up4 = up_conv(ch_in=512,ch_out=256) self.Att4 = Attention_block(F_g=256,F_l=256,F_int=128) self.Up_RRCNN4 = RRCNN_block(ch_in=512, ch_out=256,t=t) self.Up3 = up_conv(ch_in=256,ch_out=128) self.Att3 = Attention_block(F_g=128,F_l=128,F_int=64) self.Up_RRCNN3 = RRCNN_block(ch_in=256, ch_out=128,t=t) self.Up2 = up_conv(ch_in=128,ch_out=64) self.Att2 = Attention_block(F_g=64,F_l=64,F_int=32) self.Up_RRCNN2 = RRCNN_block(ch_in=128, ch_out=64,t=t) self.Conv_1x1 = nn.Conv2d(64,output_ch,kernel_size=1,stride=1,padding=0) def forward(self,x): # encoding path x1 = self.RRCNN1(x) x2 = self.Maxpool(x1) x2 = self.RRCNN2(x2) x3 = self.Maxpool(x2) x3 = self.RRCNN3(x3) x4 = self.Maxpool(x3) x4 = self.RRCNN4(x4) x5 = self.Maxpool(x4) x5 = self.RRCNN5(x5) # decoding + concat path d5 = self.Up5(x5) x4 = self.Att5(g=d5,x=x4) d5 = torch.cat((x4,d5),dim=1) d5 = self.Up_RRCNN5(d5) d4 = self.Up4(d5) x3 = self.Att4(g=d4,x=x3) d4 = torch.cat((x3,d4),dim=1) d4 = self.Up_RRCNN4(d4) d3 = self.Up3(d4) x2 = self.Att3(g=d3,x=x2) d3 = torch.cat((x2,d3),dim=1) d3 = self.Up_RRCNN3(d3) d2 = self.Up2(d3) x1 = self.Att2(g=d2,x=x1) d2 = torch.cat((x1,d2),dim=1) d2 = self.Up_RRCNN2(d2) d1 = self.Conv_1x1(d2) return d1