Update app.py
Browse files
app.py
CHANGED
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@@ -81,16 +81,20 @@ def process_image(image):
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# Cell size distribution
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df = pd.DataFrame(features)
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df
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plt.tight_layout()
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@@ -121,10 +125,10 @@ with gr.Blocks(title="Cell Analysis Tool") as demo:
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with gr.Row():
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with gr.Column():
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input_image = gr.Image(
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label="Upload Image",
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type="numpy"
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tool="upload"
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)
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analyze_btn = gr.Button(
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"Analyze Image",
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# Cell size distribution
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df = pd.DataFrame(features)
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if not df.empty:
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df['area'].hist(ax=axes[0], bins=20)
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axes[0].set_title('Cell Size Distribution')
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axes[0].set_xlabel('Area')
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axes[0].set_ylabel('Count')
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# Circularity vs Intensity
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axes[1].scatter(df['circularity'], df['mean_intensity'])
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axes[1].set_title('Circularity vs Intensity')
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axes[1].set_xlabel('Circularity')
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axes[1].set_ylabel('Mean Intensity')
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else:
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axes[0].text(0.5, 0.5, 'No cells detected', ha='center')
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axes[1].text(0.5, 0.5, 'No cells detected', ha='center')
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plt.tight_layout()
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with gr.Row():
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with gr.Column():
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# Fixed the Image component configuration
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input_image = gr.Image(
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label="Upload Image",
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type="numpy"
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)
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analyze_btn = gr.Button(
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"Analyze Image",
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