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Add BiLSTMAttentionBERT model implementation and update import statements
Browse files- utils/model.py +25 -0
- utils/prediction.py +1 -1
utils/model.py
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import torch
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import torch.nn as nn
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from transformers import PreTrainedModel, AutoModel
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class BiLSTMAttentionBERT(PreTrainedModel):
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def __init__(self, hidden_dim, num_classes, num_layers, dropout):
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super().__init__(PretrainedConfig())
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self.bert = AutoModel.from_pretrained('dmis-lab/biobert-base-cased-v1.2')
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self.lstm = nn.LSTM(768, hidden_dim, num_layers, batch_first=True, bidirectional=True)
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self.dropout = nn.Dropout(dropout)
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self.fc = nn.Linear(hidden_dim * 2, num_classes)
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@classmethod
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def from_pretrained(cls, model_path, hidden_dim, num_classes, num_layers, dropout):
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model = cls(hidden_dim, num_classes, num_layers, dropout)
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state_dict = torch.load(model_path, map_location='cpu')
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model.load_state_dict(state_dict)
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return model
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def forward(self, input_ids, attention_mask):
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bert_output = self.bert(input_ids, attention_mask=attention_mask)[0]
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lstm_output, _ = self.lstm(bert_output)
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dropped = self.dropout(lstm_output[:, -1, :])
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output = self.fc(dropped)
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return output
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utils/prediction.py
CHANGED
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@@ -1,7 +1,7 @@
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import torch
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from transformers import AutoTokenizer
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from sklearn.preprocessing import LabelEncoder
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from utils.BiLSTM import BiLSTMAttentionBERT
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import numpy as np
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import streamlit as st
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import requests
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from utils.model import BiLSTMAttentionBERT
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import torch
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from transformers import AutoTokenizer
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from sklearn.preprocessing import LabelEncoder
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import numpy as np
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import streamlit as st
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import requests
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