Add RunPod resume flags to README

README.md

@@ -237,6 +237,26 @@ If a run is interrupted, rerun with `--skip-census` and/or
 `--skip-existing-analysis` only after confirming the expected `.npz` files and
 analysis outputs exist.
 
+When resuming an existing RunPod atlas root, this is the flag set we actually
+used:
+
+```bash
+python app.py --model meta-llama/Llama-3.1-8B-Instruct \
+    --corpus prompts/prompts_balanced.jsonl \
+    --positive prompts/authentic.jsonl --negative prompts/corporate.jsonl \
+    --outdir outputs/llama8b-attn --atlas atlas/llama8b-attn \
+    --components attn,heads,q,k,v --max-length 128 --batch-size 64 \
+    --dtype float16 --attn-implementation flash_attention_2 \
+    --layers all --timing-every 10 \
+    --skip-census --skip-existing-analysis \
+    --sub-zero --logit-lens \
+    --wandb-project qwip-atlas --wandb-run-name llama3.1-8b-attn-qkv \
+    --persist-login
+```
+
+If census already exists but you want to rerun later stages only, drop
+`--skip-census` and keep `--skip-existing-analysis`.
+
 ### Combine outputs into the atlas
 
 Use these commands to build a final combined atlas from existing MLP and