Update core/trainer.py
Browse files- core/trainer.py +80 -109
core/trainer.py
CHANGED
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@@ -1,7 +1,7 @@
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import torch
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import torch.nn as nn
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import torch.optim as optim
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from torch.optim.lr_scheduler import
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import numpy as np
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import time
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import logging
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@@ -10,33 +10,40 @@ from utils.metrics import GraphMetrics
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logger = logging.getLogger(__name__)
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class GraphMambaTrainer:
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"""
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def __init__(self, model, config, device):
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self.model = model
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self.config = config
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self.device = device
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#
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self.lr =
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self.epochs = config['training']['epochs']
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self.patience = config['training'].get('patience',
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self.min_lr = config['training'].get('min_lr', 1e-6)
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#
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self.optimizer = optim.AdamW(
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model.parameters(),
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lr=self.lr,
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weight_decay=config['training']['weight_decay'],
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betas=(0.9, 0.999),
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eps=1e-8
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)
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# Proper loss function
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self.criterion = nn.CrossEntropyLoss()
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#
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self.scheduler =
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# Training state
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self.best_val_acc = 0.0
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@@ -46,36 +53,34 @@ class GraphMambaTrainer:
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'train_loss': [], 'train_acc': [],
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'val_loss': [], 'val_acc': [], 'lr': []
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}
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self.
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self.optimizer,
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max_lr=self.lr,
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total_steps=total_steps,
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pct_start=0.1, # 10% warmup
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anneal_strategy='cos',
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div_factor=10.0, # Start LR = max_lr/10
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final_div_factor=100.0 # End LR = max_lr/100
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)
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def train_node_classification(self, data, verbose=True):
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"""
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if verbose:
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print(f"ποΈ Training GraphMamba for {self.epochs} epochs")
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print(f"π Dataset: {data.num_nodes} nodes, {data.num_edges} edges")
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print(f"π― Classes: {len(torch.unique(data.y))}")
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print(f"πΎ Device: {self.device}")
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print(f"βοΈ Parameters: {
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# Initialize classifier
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num_classes = len(torch.unique(data.y))
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self.model._init_classifier(num_classes, self.device)
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# Setup scheduler
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self._setup_scheduler(self.epochs)
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self.model.train()
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start_time = time.time()
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@@ -86,6 +91,9 @@ class GraphMambaTrainer:
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# Validation step
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val_metrics = self._validate_epoch(data, epoch)
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# Update history
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self.training_history['train_loss'].append(train_metrics['loss'])
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self.training_history['train_acc'].append(train_metrics['acc'])
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@@ -93,59 +101,85 @@ class GraphMambaTrainer:
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self.training_history['val_acc'].append(val_metrics['acc'])
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self.training_history['lr'].append(self.optimizer.param_groups[0]['lr'])
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# Check for improvement
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if val_metrics['acc'] > self.best_val_acc:
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self.best_val_acc = val_metrics['acc']
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self.best_val_loss = val_metrics['loss']
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self.patience_counter = 0
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if verbose:
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print(f"π New best validation accuracy: {self.best_val_acc:.4f}")
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else:
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self.patience_counter += 1
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#
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if verbose and (epoch == 0 or (epoch + 1) % 10 == 0 or epoch == self.epochs - 1):
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elapsed = time.time() - start_time
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print(f"Epoch {epoch:3d} | "
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f"Train: {train_metrics['loss']:.4f} ({train_metrics['acc']:.4f}) | "
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f"Val: {val_metrics['loss']:.4f} ({val_metrics['acc']:.4f}) | "
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f"
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f"
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# Early stopping
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if self.patience_counter >= self.patience:
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if verbose:
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print(f"π Early stopping at epoch {epoch}")
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break
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# Step scheduler
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self.scheduler.step()
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if verbose:
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total_time = time.time() - start_time
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print(f"β
Training completed in {total_time:.2f}s")
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print(f"π Best validation accuracy: {self.best_val_acc:.4f}")
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return self.training_history
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def _train_epoch(self, data, epoch):
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"""Single training epoch"""
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self.model.train()
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self.optimizer.zero_grad()
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# Forward pass
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h = self.model(data.x, data.edge_index)
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logits = self.model.classifier(h)
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# Compute loss on training nodes
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train_loss = self.criterion(logits[data.train_mask], data.y[data.train_mask])
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#
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#
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torch.nn.utils.clip_grad_norm_(self.model.parameters(), max_norm=1.0)
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self.optimizer.step()
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# Compute accuracy
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return {'loss': train_loss.item(), 'acc': train_acc}
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def _validate_epoch(self, data, epoch):
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"""
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self.model.eval()
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with torch.no_grad():
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return {'loss': val_loss.item(), 'acc': val_acc}
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def test(self, data):
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"""
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self.model.eval()
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with torch.no_grad():
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h = self.model(data.x, data.edge_index)
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# Ensure classifier exists
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if self.model.classifier is None:
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num_classes = len(torch.unique(data.y))
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self.model._init_classifier(num_classes, self.device)
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test_pred = logits[data.test_mask]
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test_target = data.y[data.test_mask]
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# Comprehensive metrics
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metrics = {
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'test_loss': test_loss.item(),
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'test_acc': GraphMetrics.accuracy(test_pred, test_target),
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'f1_micro': GraphMetrics.f1_score_micro(test_pred, test_target),
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}
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# Additional metrics
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precision, recall = GraphMetrics.precision_recall(test_pred, test_target)
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metrics['precision'] = precision
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metrics['recall'] = recall
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"""Get node embeddings"""
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self.model.eval()
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with torch.no_grad():
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return self.model(data.x, data.edge_index)
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class EnhancedGraphMambaTrainer(GraphMambaTrainer):
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"""Enhanced trainer with additional optimizations"""
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def __init__(self, model, config, device):
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super().__init__(model, config, device)
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# Even more conservative learning rate for complex architectures
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if hasattr(model, 'multi_scale') or 'Hybrid' in model.__class__.__name__:
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self.lr = 0.0005 # Lower for complex models
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self.optimizer = optim.AdamW(
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model.parameters(),
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lr=self.lr,
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weight_decay=config['training']['weight_decay'],
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betas=(0.9, 0.99), # More stable
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eps=1e-8
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)
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def _setup_scheduler(self, total_steps):
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"""Enhanced scheduler for complex models"""
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# Cosine annealing with warm restarts
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self.scheduler = CosineAnnealingWarmRestarts(
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self.optimizer,
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T_0=20, # Restart every 20 epochs
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T_mult=2, # Double period after restart
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eta_min=self.min_lr
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)
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def train_node_classification(self, data, verbose=True):
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"""Training with enhanced monitoring"""
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if verbose:
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model_type = self.model.__class__.__name__
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print(f"ποΈ Training {model_type} for {self.epochs} epochs")
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print(f"π Dataset: {data.num_nodes} nodes, {data.num_edges} edges")
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print(f"π― Classes: {len(torch.unique(data.y))}")
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print(f"πΎ Device: {self.device}")
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print(f"βοΈ Parameters: {sum(p.numel() for p in self.model.parameters()):,}")
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print(f"π Learning Rate: {self.lr} (enhanced schedule)")
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# Call parent method with enhancements
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history = super().train_node_classification(data, verbose)
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# Additional analysis
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if verbose:
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final_acc = history['val_acc'][-1] if history['val_acc'] else 0
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improvement = final_acc - (history['val_acc'][0] if history['val_acc'] else 0)
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print(f"π Final validation accuracy: {final_acc:.4f}")
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print(f"π Total improvement: {improvement:.4f} ({improvement*100:.1f}%)")
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if final_acc > 0.6:
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print("π Excellent performance! Model converged well.")
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elif final_acc > 0.4:
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print("π Good progress! Consider more epochs or tuning.")
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else:
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print("β οΈ Low accuracy. Check model architecture or data.")
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return history
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import torch
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import torch.nn as nn
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import torch.optim as optim
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from torch.optim.lr_scheduler import ReduceLROnPlateau
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import numpy as np
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import time
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import logging
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logger = logging.getLogger(__name__)
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class GraphMambaTrainer:
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"""Anti-overfitting trainer with heavy regularization"""
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def __init__(self, model, config, device):
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self.model = model
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self.config = config
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self.device = device
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# Conservative learning rate
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self.lr = config['training']['learning_rate'] # Should be 0.0005
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self.epochs = config['training']['epochs']
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self.patience = config['training'].get('patience', 10)
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self.min_lr = config['training'].get('min_lr', 1e-6)
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# Heavily regularized optimizer
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self.optimizer = optim.AdamW(
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model.parameters(),
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lr=self.lr,
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weight_decay=config['training']['weight_decay'], # Should be 0.01
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betas=(0.9, 0.999),
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eps=1e-8
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)
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# Proper loss function with label smoothing
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self.criterion = nn.CrossEntropyLoss(label_smoothing=0.1)
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# Conservative scheduler
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self.scheduler = ReduceLROnPlateau(
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self.optimizer,
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mode='max',
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factor=0.5,
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patience=5,
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min_lr=self.min_lr,
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verbose=True
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)
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# Training state
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self.best_val_acc = 0.0
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'train_loss': [], 'train_acc': [],
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'val_loss': [], 'val_acc': [], 'lr': []
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}
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# Track overfitting
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self.best_gap = float('inf')
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self.overfitting_threshold = 0.3 # Stop if train-val gap > 30%
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def train_node_classification(self, data, verbose=True):
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"""Anti-overfitting training"""
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if verbose:
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total_params = sum(p.numel() for p in self.model.parameters())
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train_samples = data.train_mask.sum().item()
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params_per_sample = total_params / train_samples
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print(f"ποΈ Training GraphMamba for {self.epochs} epochs")
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print(f"π Dataset: {data.num_nodes} nodes, {data.num_edges} edges")
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print(f"π― Classes: {len(torch.unique(data.y))}")
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print(f"πΎ Device: {self.device}")
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print(f"βοΈ Parameters: {total_params:,}")
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print(f"π Training samples: {train_samples}")
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print(f"β οΈ Params per sample: {params_per_sample:.1f}")
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if params_per_sample > 1000:
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print(f"π¨ WARNING: High params per sample ratio - overfitting risk!")
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# Initialize classifier
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num_classes = len(torch.unique(data.y))
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self.model._init_classifier(num_classes, self.device)
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self.model.train()
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start_time = time.time()
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# Validation step
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val_metrics = self._validate_epoch(data, epoch)
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# Calculate overfitting gap
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acc_gap = train_metrics['acc'] - val_metrics['acc']
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# Update history
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self.training_history['train_loss'].append(train_metrics['loss'])
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self.training_history['train_acc'].append(train_metrics['acc'])
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self.training_history['val_acc'].append(val_metrics['acc'])
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self.training_history['lr'].append(self.optimizer.param_groups[0]['lr'])
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# Step scheduler
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self.scheduler.step(val_metrics['acc'])
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# Check for improvement
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if val_metrics['acc'] > self.best_val_acc:
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self.best_val_acc = val_metrics['acc']
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self.best_val_loss = val_metrics['loss']
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self.best_gap = acc_gap
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self.patience_counter = 0
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if verbose:
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print(f"π New best validation accuracy: {self.best_val_acc:.4f}")
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else:
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self.patience_counter += 1
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# Overfitting detection
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if acc_gap > self.overfitting_threshold:
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if verbose:
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print(f"π¨ OVERFITTING detected: {acc_gap:.3f} gap")
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print(f" Train: {train_metrics['acc']:.3f}, Val: {val_metrics['acc']:.3f}")
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# Progress logging with overfitting monitoring
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if verbose and (epoch == 0 or (epoch + 1) % 10 == 0 or epoch == self.epochs - 1):
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elapsed = time.time() - start_time
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gap_indicator = "π¨" if acc_gap > 0.2 else "β οΈ" if acc_gap > 0.1 else "β
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print(f"Epoch {epoch:3d} | "
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f"Train: {train_metrics['loss']:.4f} ({train_metrics['acc']:.4f}) | "
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f"Val: {val_metrics['loss']:.4f} ({val_metrics['acc']:.4f}) | "
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f"Gap: {acc_gap:.3f} {gap_indicator} | "
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f"LR: {self.optimizer.param_groups[0]['lr']:.6f}")
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# Early stopping conditions
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if self.patience_counter >= self.patience:
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if verbose:
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print(f"π Early stopping at epoch {epoch} (patience)")
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break
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# Stop if severe overfitting
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if acc_gap > 0.5:
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if verbose:
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+
print(f"π Stopping due to severe overfitting (gap: {acc_gap:.3f})")
|
| 145 |
break
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|
| 146 |
|
| 147 |
if verbose:
|
| 148 |
total_time = time.time() - start_time
|
| 149 |
print(f"β
Training completed in {total_time:.2f}s")
|
| 150 |
print(f"π Best validation accuracy: {self.best_val_acc:.4f}")
|
| 151 |
+
print(f"π Best train-val gap: {self.best_gap:.4f}")
|
| 152 |
+
|
| 153 |
+
if self.best_gap < 0.1:
|
| 154 |
+
print("π Excellent generalization!")
|
| 155 |
+
elif self.best_gap < 0.2:
|
| 156 |
+
print("π Good generalization")
|
| 157 |
+
else:
|
| 158 |
+
print("β οΈ Some overfitting detected")
|
| 159 |
|
| 160 |
return self.training_history
|
| 161 |
|
| 162 |
def _train_epoch(self, data, epoch):
|
| 163 |
+
"""Single training epoch with regularization"""
|
| 164 |
self.model.train()
|
| 165 |
self.optimizer.zero_grad()
|
| 166 |
|
| 167 |
+
# Forward pass (with data augmentation)
|
| 168 |
h = self.model(data.x, data.edge_index)
|
| 169 |
logits = self.model.classifier(h)
|
| 170 |
|
| 171 |
+
# Compute loss on training nodes only
|
| 172 |
train_loss = self.criterion(logits[data.train_mask], data.y[data.train_mask])
|
| 173 |
|
| 174 |
+
# Add L2 regularization manually if needed
|
| 175 |
+
l2_reg = 0.0
|
| 176 |
+
for param in self.model.parameters():
|
| 177 |
+
l2_reg += torch.norm(param, p=2)
|
| 178 |
+
train_loss += 1e-5 * l2_reg # Small additional L2
|
| 179 |
|
| 180 |
+
# Backward pass with gradient clipping
|
| 181 |
+
train_loss.backward()
|
| 182 |
torch.nn.utils.clip_grad_norm_(self.model.parameters(), max_norm=1.0)
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|
| 183 |
self.optimizer.step()
|
| 184 |
|
| 185 |
# Compute accuracy
|
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|
| 190 |
return {'loss': train_loss.item(), 'acc': train_acc}
|
| 191 |
|
| 192 |
def _validate_epoch(self, data, epoch):
|
| 193 |
+
"""Validation without augmentation"""
|
| 194 |
self.model.eval()
|
| 195 |
|
| 196 |
with torch.no_grad():
|
|
|
|
| 205 |
return {'loss': val_loss.item(), 'acc': val_acc}
|
| 206 |
|
| 207 |
def test(self, data):
|
| 208 |
+
"""Test evaluation"""
|
| 209 |
self.model.eval()
|
| 210 |
|
| 211 |
with torch.no_grad():
|
| 212 |
h = self.model(data.x, data.edge_index)
|
| 213 |
|
|
|
|
| 214 |
if self.model.classifier is None:
|
| 215 |
num_classes = len(torch.unique(data.y))
|
| 216 |
self.model._init_classifier(num_classes, self.device)
|
|
|
|
| 222 |
test_pred = logits[data.test_mask]
|
| 223 |
test_target = data.y[data.test_mask]
|
| 224 |
|
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|
| 225 |
metrics = {
|
| 226 |
'test_loss': test_loss.item(),
|
| 227 |
'test_acc': GraphMetrics.accuracy(test_pred, test_target),
|
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|
| 229 |
'f1_micro': GraphMetrics.f1_score_micro(test_pred, test_target),
|
| 230 |
}
|
| 231 |
|
|
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|
| 232 |
precision, recall = GraphMetrics.precision_recall(test_pred, test_target)
|
| 233 |
metrics['precision'] = precision
|
| 234 |
metrics['recall'] = recall
|
|
|
|
| 239 |
"""Get node embeddings"""
|
| 240 |
self.model.eval()
|
| 241 |
with torch.no_grad():
|
| 242 |
+
return self.model(data.x, data.edge_index)
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