feat: implement 3D knowledge graph visualization using react-force-graph-3d

frontend/package-lock.json

@@ -8,19 +8,21 @@
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+        "@rollup/rollup-android-arm64": "4.60.1",
+        "@rollup/rollup-darwin-arm64": "4.60.1",
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+        "@rollup/rollup-freebsd-x64": "4.60.1",
+        "@rollup/rollup-linux-arm-gnueabihf": "4.60.1",
+        "@rollup/rollup-linux-arm-musleabihf": "4.60.1",
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+        "@rollup/rollup-openharmony-arm64": "4.60.1",
+        "@rollup/rollup-win32-arm64-msvc": "4.60.1",
+        "@rollup/rollup-win32-ia32-msvc": "4.60.1",
+        "@rollup/rollup-win32-x64-gnu": "4.60.1",
+        "@rollup/rollup-win32-x64-msvc": "4.60.1",
+        "fsevents": "~2.3.2"
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-      "version": "0.27.0",
-      "resolved": "https://registry.npmjs.org/scheduler/-/scheduler-0.27.0.tgz",
-      "integrity": "sha512-eNv+WrVbKu1f3vbYJT/xtiF5syA5HPIMtf9IgY/nKg0sWqzAUEvqY/xm7OcZc/qafLx/iO9FgOmeSAp4v5ti/Q==",
-      "license": "MIT"
+      "version": "0.23.2",
+      "resolved": "https://registry.npmjs.org/scheduler/-/scheduler-0.23.2.tgz",
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+      "license": "MIT",
+      "dependencies": {
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     "node_modules/semver": {
       "version": "6.3.1",
@@ -2376,15 +3091,71 @@
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+    "node_modules/three": {
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+      "resolved": "https://registry.npmjs.org/three/-/three-0.183.2.tgz",
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+      "license": "MIT",
+      "peer": true
+    },
+    "node_modules/three-forcegraph": {
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+      "resolved": "https://registry.npmjs.org/three-forcegraph/-/three-forcegraph-1.43.2.tgz",
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+      "license": "MIT",
+      "dependencies": {
+        "accessor-fn": "1",
+        "d3-array": "1 - 3",
+        "d3-force-3d": "2 - 3",
+        "d3-scale": "1 - 4",
+        "d3-scale-chromatic": "1 - 3",
+        "data-bind-mapper": "1",
+        "kapsule": "^1.16",
+        "ngraph.forcelayout": "3",
+        "ngraph.graph": "20",
+        "tinycolor2": "1"
+      },
+      "engines": {
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+        "three": ">=0.118.3"
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+    "node_modules/three-render-objects": {
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+      "resolved": "https://registry.npmjs.org/three-render-objects/-/three-render-objects-1.41.1.tgz",
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+      "license": "MIT",
+      "dependencies": {
+        "@tweenjs/tween.js": "18 - 25",
+        "accessor-fn": "1",
+        "float-tooltip": "^1.7",
+        "kapsule": "^1.16",
+        "polished": "4"
+      },
+      "engines": {
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+      "peerDependencies": {
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+    "node_modules/tinycolor2": {
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+      "resolved": "https://registry.npmjs.org/tinycolor2/-/tinycolor2-1.6.0.tgz",
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+      "license": "MIT"
+    },
     "node_modules/tinyglobby": {
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+      "version": "0.2.16",
+      "resolved": "https://registry.npmjs.org/tinyglobby/-/tinyglobby-0.2.16.tgz",
+      "integrity": "sha512-pn99VhoACYR8nFHhxqix+uvsbXineAasWm5ojXoN8xEwK5Kd3/TrhNn1wByuD52UxWRLy8pu+kRMniEi6Eq9Zg==",
       "dev": true,
       "license": "MIT",
       "dependencies": {
         "fdir": "^6.5.0",
-        "picomatch": "^4.0.3"
+        "picomatch": "^4.0.4"
       },
       "engines": {
         "node": ">=12.0.0"
@@ -2393,14 +3164,6 @@
         "url": "https://github.com/sponsors/SuperchupuDev"
       }
     },
-    "node_modules/tslib": {
-      "version": "2.8.1",
-      "resolved": "https://registry.npmjs.org/tslib/-/tslib-2.8.1.tgz",
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-      "dev": true,
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@@ -2456,24 +3219,25 @@
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+      "version": "6.4.2",
+      "resolved": "https://registry.npmjs.org/vite/-/vite-6.4.2.tgz",
+      "integrity": "sha512-2N/55r4JDJ4gdrCvGgINMy+HH3iRpNIz8K6SFwVsA+JbQScLiC+clmAxBgwiSPgcG9U15QmvqCGWzMbqda5zGQ==",
       "dev": true,
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       "peer": true,
       "dependencies": {
-        "lightningcss": "^1.32.0",
-        "picomatch": "^4.0.3",
-        "postcss": "^8.5.8",
-        "rolldown": "1.0.0-rc.10",
-        "tinyglobby": "^0.2.15"
+        "esbuild": "^0.25.0",
+        "fdir": "^6.4.4",
+        "picomatch": "^4.0.2",
+        "postcss": "^8.5.3",
+        "rollup": "^4.34.9",
+        "tinyglobby": "^0.2.13"
       },
       "bin": {
         "vite": "bin/vite.js"
       },
       "engines": {
-        "node": "^20.19.0 || >=22.12.0"
+        "node": "^18.0.0 || ^20.0.0 || >=22.0.0"
       },
       "funding": {
         "url": "https://github.com/vitejs/vite?sponsor=1"
@@ -2482,15 +3246,14 @@
         "fsevents": "~2.3.3"
       },
       "peerDependencies": {
-        "@types/node": "^20.19.0 || >=22.12.0",
-        "@vitejs/devtools": "^0.1.0",
-        "esbuild": "^0.27.0",
+        "@types/node": "^18.0.0 || ^20.0.0 || >=22.0.0",
         "jiti": ">=1.21.0",
-        "less": "^4.0.0",
-        "sass": "^1.70.0",
-        "sass-embedded": "^1.70.0",
-        "stylus": ">=0.54.8",
-        "sugarss": "^5.0.0",
+        "less": "*",
+        "lightningcss": "^1.21.0",
+        "sass": "*",
+        "sass-embedded": "*",
+        "stylus": "*",
+        "sugarss": "*",
         "terser": "^5.16.0",
         "tsx": "^4.8.1",
         "yaml": "^2.4.2"
@@ -2499,18 +3262,15 @@
         "@types/node": {
           "optional": true
         },
-        "@vitejs/devtools": {
-          "optional": true
-        },
-        "esbuild": {
-          "optional": true
-        },
         "jiti": {
           "optional": true
         },
         "less": {
           "optional": true
         },
+        "lightningcss": {
+          "optional": true
+        },
         "sass": {
           "optional": true
         },
@@ -2579,30 +3339,6 @@
       "funding": {
         "url": "https://github.com/sponsors/sindresorhus"
       }
-    },
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-      "resolved": "https://registry.npmjs.org/zod/-/zod-4.3.6.tgz",
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-      "dev": true,
-      "license": "MIT",
-      "peer": true,
-      "funding": {
-        "url": "https://github.com/sponsors/colinhacks"
-      }
-    },
-    "node_modules/zod-validation-error": {
-      "version": "4.0.2",
-      "resolved": "https://registry.npmjs.org/zod-validation-error/-/zod-validation-error-4.0.2.tgz",
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-      "dev": true,
-      "license": "MIT",
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-      "peerDependencies": {
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     }
   }
 }

frontend/package.json

@@ -11,7 +11,9 @@
   },
   "dependencies": {
     "react": "^18.3.1",
-    "react-dom": "^18.3.1"
+    "react-dom": "^18.3.1",
+    "react-force-graph-3d": "^1.29.1",
+    "three": "^0.183.2"
   },
   "devDependencies": {
     "@eslint/js": "^9.15.0",

frontend/src/components/KnowledgeGraph.css

@@ -20,18 +20,7 @@
   z-index: 0;
 }
 
-.graph-canvas {
-  display: block;
-  width: 100%;
-  height: 100%;
-  cursor: grab;
-  z-index: 1;
-  position: relative;
-}
 
-.graph-canvas:active {
-  cursor: grabbing;
-}
 
 /* ── Header Bar ── */
 .graph-header {

frontend/src/components/KnowledgeGraph.jsx

@@ -1,72 +1,36 @@
 import { useState, useRef, useEffect, useCallback } from 'react';
+import ForceGraph3D from 'react-force-graph-3d';
+import * as THREE from 'three';
 import './KnowledgeGraph.css';
 
-/* ================================================================
-   KnowledgeGraph — Canvas-based Force-Directed Graph Visualizer
-   Zero external dependencies. Pure physics simulation on <canvas>.
-   ================================================================ */
-
-// ── Physics Constants ───────────────────────────────────────────
-const REPULSION   = 12000;  // Coulomb repulsion between nodes
-const ATTRACTION  = 0.005;  // Spring attraction along edges
-const DAMPING     = 0.90;   // Velocity damping per frame
-const CENTER_PULL = 0.004;  // Gravity toward canvas center
-const MIN_DIST    = 90;     // Min distance before repulsion caps
-const DT          = 0.8;    // Simulation timestep
-
-// ── Visual Constants ────────────────────────────────────────────
-const NODE_BASE_RADIUS  = 6;
-const NODE_SCALE_FACTOR = 2.5;
-const NODE_MAX_RADIUS   = 22;
-const EDGE_WIDTH        = 0.8;
-const LABEL_FONT        = '600 9px "JetBrains Mono", monospace';
-const EDGE_LABEL_FONT   = '500 7px "JetBrains Mono", monospace';
-
-// ── Color Palette ───────────────────────────────────────────────
-const COLORS = {
-  nodeFill:       'rgba(71, 191, 255, 0.9)',
-  nodeGlow:       'rgba(71, 191, 255, 0.35)',
-  nodeStroke:     'rgba(71, 191, 255, 0.6)',
-  nodeHover:      'rgba(71, 191, 255, 1)',
-  nodeHoverGlow:  'rgba(71, 191, 255, 0.6)',
-  edgeLine:       'rgba(134, 59, 255, 0.25)',
-  edgeHover:      'rgba(134, 59, 255, 0.55)',
-  edgeLabel:      'rgba(134, 59, 255, 0.5)',
-  labelText:      'rgba(224, 224, 224, 0.85)',
-  labelDim:       'rgba(224, 224, 224, 0.4)',
-  bg:             '#080808',
-  gridLine:       'rgba(255, 255, 255, 0.03)',
-  particleColor:  'rgba(71, 191, 255, 0.6)',
-  nodeHighlight:  'rgba(255, 215, 0, 0.8)',
-  nodeHighlightGlow: 'rgba(255, 215, 0, 0.3)',
-};
-
-
 function KnowledgeGraph({ highlightedNodes = [] }) {
-  const canvasRef      = useRef(null);
-  const animFrameRef   = useRef(null);
-  const nodesRef       = useRef([]);
-  const edgesRef       = useRef([]);
-  const particlesRef   = useRef([]);
-  const dragNodeRef    = useRef(null);
-  const hoverNodeRef   = useRef(null);
-  const panRef         = useRef({ x: 0, y: 0 });
-  const zoomRef        = useRef(1);
-  const mouseRef       = useRef({ x: 0, y: 0, canvasX: 0, canvasY: 0 });
-  const isDraggingRef  = useRef(false);
-  const isPanningRef   = useRef(false);
-  const panStartRef    = useRef({ x: 0, y: 0, panX: 0, panY: 0 });
-  const showLabelsRef  = useRef(true);
-  const highlightedRef = useRef([]);
+  const fgRef = useRef();
+  const containerRef = useRef(null);
 
-  const [graphData, setGraphData]     = useState({ nodes: [], edges: [] });
-  const [loading, setLoading]         = useState(true);
-  const [stats, setStats]             = useState({ nodes: 0, edges: 0 });
+  const [graphData, setGraphData] = useState({ nodes: [], links: [] });
+  const [loading, setLoading] = useState(true);
+  const [stats, setStats] = useState({ nodes: 0, edges: 0 });
   const [graphStatus, setGraphStatus] = useState('loading');
-  const [showLabels, setShowLabels]   = useState(true);
+  const [showLabels, setShowLabels] = useState(true);
+  const [dimensions, setDimensions] = useState({ width: 800, height: 600 });
   const [tooltipData, setTooltipData] = useState(null);
 
-  // ── Fetch Graph Data ────────────────────────────────────────
+  // Handle Resize
+  useEffect(() => {
+    const handleResize = () => {
+      if (containerRef.current) {
+        setDimensions({
+          width: containerRef.current.clientWidth,
+          height: containerRef.current.clientHeight
+        });
+      }
+    };
+    handleResize();
+    window.addEventListener('resize', handleResize);
+    return () => window.removeEventListener('resize', handleResize);
+  }, []);
+
+  // Fetch Graph Data
   const fetchGraph = useCallback(async () => {
     setLoading(true);
     setGraphStatus('loading');
@@ -76,483 +40,67 @@ function KnowledgeGraph({ highlightedNodes = [] }) {
 
       if (data.status === 'offline') {
         setGraphStatus('offline');
-        setGraphData({ nodes: [], edges: [] });
+        setGraphData({ nodes: [], links: [] });
         setStats({ nodes: 0, edges: 0 });
       } else if (data.nodes.length === 0) {
         setGraphStatus('empty');
-        setGraphData({ nodes: [], edges: [] });
+        setGraphData({ nodes: [], links: [] });
         setStats({ nodes: 0, edges: 0 });
       } else {
         setGraphStatus('online');
-        setGraphData(data);
+        
+        // Format for 3D Graph
+        const formattedData = {
+          nodes: data.nodes.map(n => ({
+            id: n.id,
+            label: n.label,
+            connections: n.connections || 0,
+            val: Math.max(1, (n.connections || 0) * 1.5) // Node visual size
+          })),
+          links: data.edges.map(e => ({
+            source: e.source,
+            target: e.target,
+            label: e.label
+          }))
+        };
+        
+        setGraphData(formattedData);
         setStats({ nodes: data.nodes.length, edges: data.edges.length });
-        initializePhysics(data);
       }
     } catch (err) {
       console.error('Failed to fetch graph:', err);
       setGraphStatus('error');
-      setGraphData({ nodes: [], edges: [] });
+      setGraphData({ nodes: [], links: [] });
     }
     setLoading(false);
   }, []);
 
-  // ── Initialize Physics Nodes ────────────────────────────────
-  const initializePhysics = useCallback((data) => {
-    const canvas = canvasRef.current;
-    if (!canvas) return;
-
-    const cx = canvas.clientWidth / 2;
-    const cy = canvas.clientHeight / 2;
-
-    // Spread nodes in a circle around center
-    const angleStep = (2 * Math.PI) / Math.max(data.nodes.length, 1);
-    const spread = Math.min(cx, cy) * 0.5;
-
-    nodesRef.current = data.nodes.map((n, i) => ({
-      id: n.id,
-      label: n.label,
-      connections: n.connections || 0,
-      x: cx + Math.cos(angleStep * i) * spread * (0.5 + Math.random() * 0.5),
-      y: cy + Math.sin(angleStep * i) * spread * (0.5 + Math.random() * 0.5),
-      vx: 0,
-      vy: 0,
-      radius: Math.min(NODE_BASE_RADIUS + (n.connections || 0) * NODE_SCALE_FACTOR, NODE_MAX_RADIUS),
-    }));
-
-    edgesRef.current = data.edges.map(e => ({
-      source: e.source,
-      target: e.target,
-      label: e.label,
-    }));
-
-    // Initialize edge particles
-    particlesRef.current = edgesRef.current.map(() => ({
-      t: Math.random(),  // position along edge [0, 1]
-      speed: 0.002 + Math.random() * 0.003,
-    }));
-
-    // Center the view
-    panRef.current = { x: 0, y: 0 };
-    zoomRef.current = 1;
-  }, []);
-
-  // ── Physics Step ────────────────────────────────────────────
-  const physicsStep = useCallback(() => {
-    const nodes = nodesRef.current;
-    const edges = edgesRef.current;
-    const canvas = canvasRef.current;
-    if (!canvas || nodes.length === 0) return;
-
-    const cx = canvas.clientWidth / 2;
-    const cy = canvas.clientHeight / 2;
-
-    // Node-node repulsion
-    for (let i = 0; i < nodes.length; i++) {
-      for (let j = i + 1; j < nodes.length; j++) {
-        let dx = nodes[j].x - nodes[i].x;
-        let dy = nodes[j].y - nodes[i].y;
-        let dist = Math.sqrt(dx * dx + dy * dy);
-        if (dist < MIN_DIST) dist = MIN_DIST;
-
-        const force = REPULSION / (dist * dist);
-        const fx = (dx / dist) * force;
-        const fy = (dy / dist) * force;
-
-        nodes[i].vx -= fx * DT;
-        nodes[i].vy -= fy * DT;
-        nodes[j].vx += fx * DT;
-        nodes[j].vy += fy * DT;
-      }
-    }
-
-    // Edge attraction (spring)
-    const nodeMap = {};
-    nodes.forEach(n => { nodeMap[n.id] = n; });
-
-    for (const edge of edges) {
-      const src = nodeMap[edge.source];
-      const tgt = nodeMap[edge.target];
-      if (!src || !tgt) continue;
-
-      const dx = tgt.x - src.x;
-      const dy = tgt.y - src.y;
-      const dist = Math.sqrt(dx * dx + dy * dy);
-      if (dist < 1) continue;
-
-      const force = ATTRACTION * dist;
-      const fx = (dx / dist) * force;
-      const fy = (dy / dist) * force;
-
-      src.vx += fx * DT;
-      src.vy += fy * DT;
-      tgt.vx -= fx * DT;
-      tgt.vy -= fy * DT;
-    }
-
-    // Center gravity + velocity integration
-    for (const node of nodes) {
-      if (dragNodeRef.current && node.id === dragNodeRef.current.id) continue;
-
-      node.vx += (cx - node.x) * CENTER_PULL * DT;
-      node.vy += (cy - node.y) * CENTER_PULL * DT;
-
-      node.vx *= DAMPING;
-      node.vy *= DAMPING;
-
-      node.x += node.vx;
-      node.y += node.vy;
-    }
-
-    // Advance particles
-    particlesRef.current.forEach(p => {
-      p.t += p.speed;
-      if (p.t > 1) p.t -= 1;
-    });
-  }, []);
-
-  // ── Render Frame ────────────────────────────────────────────
-  const render = useCallback(() => {
-    const canvas = canvasRef.current;
-    if (!canvas) return;
-    const ctx = canvas.getContext('2d');
-    const W = canvas.clientWidth;
-    const H = canvas.clientHeight;
-    const nodes = nodesRef.current;
-    const edges = edgesRef.current;
-    const particles = particlesRef.current;
-    const nodeMap = {};
-    nodes.forEach(n => { nodeMap[n.id] = n; });
-
-    const zoom = zoomRef.current;
-    const pan = panRef.current;
-
-    ctx.clearRect(0, 0, W, H);
-    ctx.fillStyle = COLORS.bg;
-    ctx.fillRect(0, 0, W, H);
-
-    // Draw subtle grid
-    ctx.save();
-    ctx.translate(pan.x, pan.y);
-    ctx.scale(zoom, zoom);
-
-    const gridSize = 40;
-    ctx.strokeStyle = COLORS.gridLine;
-    ctx.lineWidth = 0.5 / zoom;
-    const startX = -pan.x / zoom - 200;
-    const endX = (W - pan.x) / zoom + 200;
-    const startY = -pan.y / zoom - 200;
-    const endY = (H - pan.y) / zoom + 200;
-
-    for (let x = Math.floor(startX / gridSize) * gridSize; x < endX; x += gridSize) {
-      ctx.beginPath();
-      ctx.moveTo(x, startY);
-      ctx.lineTo(x, endY);
-      ctx.stroke();
-    }
-    for (let y = Math.floor(startY / gridSize) * gridSize; y < endY; y += gridSize) {
-      ctx.beginPath();
-      ctx.moveTo(startX, y);
-      ctx.lineTo(endX, y);
-      ctx.stroke();
-    }
-
-    // ── Draw Edges ──────────────────────────────────────
-    edges.forEach((edge, idx) => {
-      const src = nodeMap[edge.source];
-      const tgt = nodeMap[edge.target];
-      if (!src || !tgt) return;
-
-      const isHovered = hoverNodeRef.current &&
-        (edge.source === hoverNodeRef.current.id || edge.target === hoverNodeRef.current.id);
-
-      // Edge line
-      const grad = ctx.createLinearGradient(src.x, src.y, tgt.x, tgt.y);
-      if (isHovered) {
-        grad.addColorStop(0, 'rgba(71, 191, 255, 0.5)');
-        grad.addColorStop(1, 'rgba(134, 59, 255, 0.5)');
-      } else {
-        grad.addColorStop(0, 'rgba(71, 191, 255, 0.12)');
-        grad.addColorStop(1, COLORS.edgeLine);
-      }
-
-      ctx.beginPath();
-      ctx.moveTo(src.x, src.y);
-      ctx.lineTo(tgt.x, tgt.y);
-      ctx.strokeStyle = grad;
-      ctx.lineWidth = isHovered ? 1.5 / zoom : EDGE_WIDTH / zoom;
-      ctx.stroke();
-
-      // Edge particle
-      if (particles[idx]) {
-        const p = particles[idx];
-        const px = src.x + (tgt.x - src.x) * p.t;
-        const py = src.y + (tgt.y - src.y) * p.t;
-        ctx.beginPath();
-        ctx.arc(px, py, (isHovered ? 2.5 : 1.5) / zoom, 0, Math.PI * 2);
-        ctx.fillStyle = COLORS.particleColor;
-        ctx.fill();
-      }
-
-      // Edge label (only when hovered or labels enabled)
-      if (isHovered && showLabelsRef.current) {
-        const mx = (src.x + tgt.x) / 2;
-        const my = (src.y + tgt.y) / 2;
-        ctx.font = EDGE_LABEL_FONT;
-        ctx.fillStyle = COLORS.edgeLabel;
-        ctx.textAlign = 'center';
-        ctx.textBaseline = 'bottom';
-        ctx.fillText(edge.label.replace(/_/g, ' '), mx, my - 4 / zoom);
-      }
-    });
-
-    // ── Draw Nodes ──────────────────────────────────────
-    nodes.forEach(node => {
-      const isHovered = hoverNodeRef.current && hoverNodeRef.current.id === node.id;
-      const r = node.radius;
-
-      // Glow effect
-      const glowRadius = isHovered ? r * 3.5 : r * 2.5;
-      const glow = ctx.createRadialGradient(node.x, node.y, r * 0.5, node.x, node.y, glowRadius);
-      glow.addColorStop(0, isHovered ? COLORS.nodeHoverGlow : COLORS.nodeGlow);
-      glow.addColorStop(1, 'transparent');
-      ctx.beginPath();
-      ctx.arc(node.x, node.y, glowRadius, 0, Math.PI * 2);
-      ctx.fillStyle = glow;
-      ctx.fill();
-
-      // Node circle
-      const isHighlighted = highlightedRef.current.includes(node.id) || highlightedRef.current.includes(node.label);
-      
-      // Node circle
-      ctx.beginPath();
-      ctx.arc(node.x, node.y, r, 0, Math.PI * 2);
-      
-      if (isHighlighted) {
-         // High-intensity highlight
-         ctx.fillStyle = COLORS.nodeHighlight;
-         // Extra glow for highlighted nodes
-         const pulse = 1 + Math.sin(Date.now() / 150) * 0.2;
-         const hGlow = ctx.createRadialGradient(node.x, node.y, r * 0.5, node.x, node.y, r * 4 * pulse);
-         hGlow.addColorStop(0, COLORS.nodeHighlightGlow);
-         hGlow.addColorStop(1, 'transparent');
-         ctx.save();
-         ctx.globalCompositeOperation = 'screen';
-         ctx.fillStyle = hGlow;
-         ctx.beginPath();
-         ctx.arc(node.x, node.y, r * 4 * pulse, 0, Math.PI * 2);
-         ctx.fill();
-         ctx.restore();
-         
-         ctx.fillStyle = COLORS.nodeHighlight; 
-      } else {
-         ctx.fillStyle = isHovered ? COLORS.nodeHover : COLORS.nodeFill;
-      }
-      
-      ctx.fill();
-      ctx.strokeStyle = isHighlighted ? COLORS.nodeHighlight : COLORS.nodeStroke;
-      ctx.lineWidth = (isHovered || isHighlighted ? 2 : 1) / zoom;
-      ctx.stroke();
-
-      // Inner highlight
-      ctx.beginPath();
-      ctx.arc(node.x - r * 0.2, node.y - r * 0.2, r * 0.35, 0, Math.PI * 2);
-      ctx.fillStyle = 'rgba(255, 255, 255, 0.15)';
-      ctx.fill();
-
-      // Label
-      if (showLabelsRef.current) {
-        ctx.font = LABEL_FONT;
-        ctx.fillStyle = isHovered ? COLORS.labelText : COLORS.labelDim;
-        ctx.textAlign = 'center';
-        ctx.textBaseline = 'top';
-        ctx.fillText(node.label, node.x, node.y + r + 6 / zoom);
-      }
-    });
-
-    ctx.restore();
-  }, []);
-
-  // ── Animation Loop ──────────────────────────────────────────
-  useEffect(() => {
-    const loop = () => {
-      physicsStep();
-      render();
-      animFrameRef.current = requestAnimationFrame(loop);
-    };
-    animFrameRef.current = requestAnimationFrame(loop);
-    return () => cancelAnimationFrame(animFrameRef.current);
-  }, [physicsStep, render]);
-
-  // ── Canvas Resize ───────────────────────────────────────────
-  useEffect(() => {
-    const resize = () => {
-      const canvas = canvasRef.current;
-      if (!canvas) return;
-      const parent = canvas.parentElement;
-      const dpr = window.devicePixelRatio || 1;
-      canvas.width = parent.clientWidth * dpr;
-      canvas.height = parent.clientHeight * dpr;
-      canvas.style.width = parent.clientWidth + 'px';
-      canvas.style.height = parent.clientHeight + 'px';
-      const ctx = canvas.getContext('2d');
-      ctx.scale(dpr, dpr);
-      // High-DPI context preserved.
-    };
-    resize();
-    window.addEventListener('resize', resize);
-    return () => window.removeEventListener('resize', resize);
-  }, []);
-
-  // ── Fetch on mount ──────────────────────────────────────────
   useEffect(() => {
     fetchGraph();
   }, [fetchGraph]);
 
-  // ── Coordinate transforms ───────────────────────────────────
-  const screenToWorld = useCallback((sx, sy) => {
-    return {
-      x: (sx - panRef.current.x) / zoomRef.current,
-      y: (sy - panRef.current.y) / zoomRef.current,
-    };
-  }, []);
-
-  const findNodeAt = useCallback((wx, wy) => {
-    const nodes = nodesRef.current;
-    for (let i = nodes.length - 1; i >= 0; i--) {
-      const n = nodes[i];
-      const dx = wx - n.x;
-      const dy = wy - n.y;
-      if (dx * dx + dy * dy < (n.radius + 6) * (n.radius + 6)) {
-        return n;
-      }
-    }
-    return null;
-  }, []);
-
-  // ── Mouse Events ────────────────────────────────────────────
-  const handleMouseDown = useCallback((e) => {
-    const rect = canvasRef.current.getBoundingClientRect();
-    const sx = e.clientX - rect.left;
-    const sy = e.clientY - rect.top;
-    const { x: wx, y: wy } = screenToWorld(sx, sy);
-
-    const node = findNodeAt(wx, wy);
-    if (node) {
-      dragNodeRef.current = node;
-      isDraggingRef.current = true;
-    } else {
-      isPanningRef.current = true;
-      panStartRef.current = {
-        x: e.clientX,
-        y: e.clientY,
-        panX: panRef.current.x,
-        panY: panRef.current.y,
-      };
+  const handleNodeClick = useCallback(node => {
+    if (fgRef.current) {
+      // Aim at node from outside it
+      const distance = 80;
+      const distRatio = 1 + distance / Math.hypot(node.x, node.y, node.z);
+
+      fgRef.current.cameraPosition(
+        { x: node.x * distRatio, y: node.y * distRatio, z: node.z * distRatio }, // new position
+        node, // lookAt ({ x, y, z })
+        1500  // ms transition duration
+      );
     }
-  }, [screenToWorld, findNodeAt]);
-
-  const handleMouseMove = useCallback((e) => {
-    const rect = canvasRef.current.getBoundingClientRect();
-    const sx = e.clientX - rect.left;
-    const sy = e.clientY - rect.top;
-    mouseRef.current = { x: e.clientX, y: e.clientY, canvasX: sx, canvasY: sy };
-
-    if (isDraggingRef.current && dragNodeRef.current) {
-      const { x: wx, y: wy } = screenToWorld(sx, sy);
-      dragNodeRef.current.x = wx;
-      dragNodeRef.current.y = wy;
-      dragNodeRef.current.vx = 0;
-      dragNodeRef.current.vy = 0;
-      return;
-    }
-
-    if (isPanningRef.current) {
-      panRef.current = {
-        x: panStartRef.current.panX + (e.clientX - panStartRef.current.x),
-        y: panStartRef.current.panY + (e.clientY - panStartRef.current.y),
-      };
-      return;
-    }
-
-    // Hover detection
-    const { x: wx, y: wy } = screenToWorld(sx, sy);
-    const node = findNodeAt(wx, wy);
-    hoverNodeRef.current = node;
-
-    if (node) {
-      // Build tooltip data with connected relations
-      const relations = edgesRef.current
-        .filter(e => e.source === node.id || e.target === node.id)
-        .slice(0, 5)
-        .map(e => ({
-          source: e.source,
-          target: e.target,
-          label: e.label.replace(/_/g, ' '),
-        }));
-
-      setTooltipData({
-        name: node.label,
-        connections: node.connections,
-        relations,
-        x: e.clientX,
-        y: e.clientY,
-      });
-      canvasRef.current.style.cursor = 'pointer';
-    } else {
-      setTooltipData(null);
-      canvasRef.current.style.cursor = isPanningRef.current ? 'grabbing' : 'grab';
-    }
-  }, [screenToWorld, findNodeAt]);
-
-  const handleMouseUp = useCallback(() => {
-    dragNodeRef.current = null;
-    isDraggingRef.current = false;
-    isPanningRef.current = false;
-  }, []);
-
-  const handleWheel = useCallback((e) => {
-    e.preventDefault();
-    const rect = canvasRef.current.getBoundingClientRect();
-    const sx = e.clientX - rect.left;
-    const sy = e.clientY - rect.top;
-
-    const zoomFactor = e.deltaY > 0 ? 0.92 : 1.08;
-    const newZoom = Math.max(0.2, Math.min(5, zoomRef.current * zoomFactor));
-
-    // Zoom toward cursor
-    const worldBefore = screenToWorld(sx, sy);
-    zoomRef.current = newZoom;
-    const worldAfter = screenToWorld(sx, sy);
-
-    panRef.current.x += (worldAfter.x - worldBefore.x) * newZoom;
-    panRef.current.y += (worldAfter.y - worldBefore.y) * newZoom;
-  }, [screenToWorld]);
-
-  // ── Attach canvas events ────────────────────────────────────
-  useEffect(() => {
-    const canvas = canvasRef.current;
-    if (!canvas) return;
-    canvas.addEventListener('wheel', handleWheel, { passive: false });
-    return () => canvas.removeEventListener('wheel', handleWheel);
-  }, [handleWheel]);
-
-  // ── Toggle labels sync ─────────────────────────────────────
-  useEffect(() => {
-    showLabelsRef.current = showLabels;
-  }, [showLabels]);
-
-  useEffect(() => {
-    highlightedRef.current = highlightedNodes;
-  }, [highlightedNodes]);
+  }, [fgRef]);
 
   // ── Render ──────────────────────────────────────────────────
   return (
-    <div className="graph-container">
+    <div className="graph-container" ref={containerRef}>
       {/* Header Bar */}
       <div className="graph-header">
         <div className="graph-title">
           <div className="pulse-ring" />
-          <h2>Neural Mesh Topology</h2>
+          <h2>Neural Mesh Topology (3D)</h2>
           <span className="label-mono" style={{ fontSize: '0.55rem' }}>
             {graphStatus === 'online' ? 'LIVE' : graphStatus.toUpperCase()}
           </span>
@@ -565,8 +113,9 @@ function KnowledgeGraph({ highlightedNodes = [] }) {
             {showLabels ? 'Hide Labels' : 'Show Labels'}
           </button>
           <button className="graph-btn" onClick={() => {
-            panRef.current = { x: 0, y: 0 };
-            zoomRef.current = 1;
+            if (fgRef.current) {
+              fgRef.current.cameraPosition({ x: 0, y: 0, z: 250 }, { x: 0, y: 0, z: 0 }, 1000);
+            }
           }}>
             Reset View
           </button>
@@ -576,15 +125,44 @@ function KnowledgeGraph({ highlightedNodes = [] }) {
         </div>
       </div>
 
-      {/* Canvas */}
-      <canvas
-        ref={canvasRef}
-        className="graph-canvas"
-        onMouseDown={handleMouseDown}
-        onMouseMove={handleMouseMove}
-        onMouseUp={handleMouseUp}
-        onMouseLeave={handleMouseUp}
-      />
+      {/* 3D Canvas Container */}
+      {(graphStatus === 'online' || graphData.nodes.length > 0) && (
+        <div className="graph-canvas-3d" style={{ position: 'absolute', top: 0, left: 0, right: 0, bottom: 0 }}>
+          <ForceGraph3D
+            ref={fgRef}
+            width={dimensions.width}
+            height={dimensions.height}
+            graphData={graphData}
+            backgroundColor="rgba(0,0,0,0)" // Transparent to show CSS background
+            
+            // Nodes
+            nodeLabel={showLabels ? "label" : ""}
+            nodeColor={node => {
+              if (highlightedNodes.includes(node.id) || highlightedNodes.includes(node.label)) {
+                return 'rgba(255, 215, 0, 0.9)'; // Highlight Gold
+              }
+              return 'rgba(71, 191, 255, 0.8)'; // Default Cyan
+            }}
+            nodeRelSize={4}
+            nodeResolution={16}
+            
+            // Edges (Synapses) -> Particles
+            linkDirectionalParticles={2}
+            linkDirectionalParticleSpeed={d => 0.005 + (0.002 * Math.random())} // Varying speed
+            linkDirectionalParticleWidth={2}
+            linkDirectionalParticleColor={() => 'rgba(134, 59, 255, 0.9)'} // Purple energy
+            
+            // Edge line styling
+            linkColor={() => 'rgba(71, 191, 255, 0.2)'}
+            linkOpacity={0.4}
+            linkWidth={0.8}
+
+            // Interaction
+            onNodeClick={handleNodeClick}
+            enableNodeDrag={true}
+          />
+        </div>
+      )}
 
       {/* Stats Overlay */}
       {graphStatus === 'online' && (
@@ -610,38 +188,13 @@ function KnowledgeGraph({ highlightedNodes = [] }) {
         <div className="graph-legend">
           <div className="legend-title">Legend</div>
           <div className="legend-item">
-            <div className="legend-dot primary" />
+            <div className="legend-dot primary" style={{ background: 'rgba(71, 191, 255, 0.8)' }} />
             <span className="legend-label">Entity Node</span>
           </div>
           <div className="legend-item">
-            <div className="legend-dot secondary" />
-            <span className="legend-label">Relationship</span>
-          </div>
-        </div>
-      )}
-
-      {/* Tooltip */}
-      {tooltipData && (
-        <div
-          className="graph-tooltip visible"
-          style={{
-            left: tooltipData.x + 16,
-            top: tooltipData.y - 10,
-          }}
-        >
-          <div className="tooltip-name">{tooltipData.name}</div>
-          <div className="tooltip-detail">
-            Connections: {tooltipData.connections}
+            <div className="legend-dot secondary" style={{ background: 'rgba(134, 59, 255, 0.8)' }} />
+            <span className="legend-label">Synaptic Flow (Particle)</span>
           </div>
-          {tooltipData.relations.length > 0 && (
-            <div className="tooltip-relations">
-              {tooltipData.relations.map((r, i) => (
-                <div key={i} className="tooltip-relation-item">
-                  {r.source}<span className="rel-arrow">→</span>{r.label}<span className="rel-arrow">→</span>{r.target}
-                </div>
-              ))}
-            </div>
-          )}
         </div>
       )}