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fc8a1cf | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 | ui <- dashboardPage(
dashboardHeader(title = "AtSRGA"),
dashboardSidebar(
sidebarMenu(
menuItem("Home", tabName = "Home", icon = icon("home")),
menuItem("Microarray", tabName = "Microarray",
menuSubItem("Atlas", tabName = "Atlasm"),
menuSubItem("Template Matching", tabName = "TemplateMatchingm")
),
menuItem("RNA-Seq", tabName = "RNA-Seq",
menuSubItem("Atlas", tabName = "Atlasr"),
menuSubItem("Template Matching", tabName = "TemplateMatchingr")
),
menuItem("Help", tabName = "Help")
)
),
dashboardBody(
tags$style(type = "text/css",
".shiny-output-error { visibility: hidden; }",
".shiny-output-error:before { visibility: hidden; }"
),
tabItems(
## ======================================================== ##
## Menu : Home
## ======================================================== ##
tabItem(tabName = "Home",
titlePanel("Wellcome to AtSRGA")
),
## ======================================================== ##
## Menu : Microarray
## ======================================================== ##
## ======================================== ##
## Sub Menu : Atlas
## ======================================== ##
tabItem(tabName = "Atlasm",
tabBox(
title = "",
width = "100%",
tabPanel("Overview", overviewUI("microarray")),
tabPanel("ABA", stressUI("ABAm")),
tabPanel("cold", stressUI("coldm")),
tabPanel("DC3000", stressUI("DC3000m")),
tabPanel("drought", stressUI("droughtm")),
tabPanel("heat", stressUI("heatm")),
tabPanel("highlight", stressUI("highlightm")),
tabPanel("hypoxia", stressUI("hypoxiam")),
tabPanel("osmotic", stressUI("osmoticm")),
tabPanel("oxidation", stressUI("oxidationm")),
tabPanel("salt", stressUI("saltm")),
tabPanel("wound", stressUI("woundm"))
)
),
## ======================================== ##
## Sub Menu : Template Matching
## ======================================== ##
tabItem(tabName = "TemplateMatchingm",
box(
title = "",
width = "100%",
TemplateMatchUI("microarray")
)
),
## ========================================================= ##
## Menu : RNA-Seq
## ========================================================= ##
## ======================================== ##
## Sub Menu : Atlas
## ======================================== ##
tabItem(tabName = "Atlasr",
tabBox(
title = "",
width = "100%",
tabPanel("Overview", overviewUI("rnaseq")),
tabPanel("ABA", stressUI("ABAr")),
tabPanel("cold", stressUI("coldr")),
tabPanel("DC3000", stressUI("DC3000r")),
tabPanel("heat", stressUI("heatr")),
tabPanel("drought", stressUI("droughtr")),
tabPanel("highlight", stressUI("highlightr")),
tabPanel("hypoxia", stressUI("hypoxiar")),
tabPanel("osmotic", stressUI("osmoticr")),
tabPanel("oxidation", stressUI("oxidationr")),
tabPanel("salt", stressUI("saltr")),
tabPanel("wound", stressUI("woundr"))
)
),
## ======================================== ##
## Sub Menu : Template Matching
## ======================================== ##
tabItem(tabName = "TemplateMatchingr",
box(
title = "",
width = "100%",
TemplateMatchUI("rnaseq")
)
),
## ======================================================== ##
## Menu : Help
## ======================================================== ##
tabItem(tabName = "Help",
box(
title = "",
width = "100%",
h1("Tutorial"),
br(),
HTML("<h4>Please see ",
"<a href = https://github.com/fusk-kpu/StressResponseGenesAtlas/raw/main/AtSRGA_tutorial_en.pdf > our tutorial file. </a>"),
br(),
br(),
br(),
br(),
h1("Contact us"),
br(),
HTML("<h4>To get in contact with our group, please visit : ",
"<a href = https://www.kpu-g.com/english > https://www.kpu-g.com/english </a>"),
br(),
br(),
br(),
br(),
h1("Report bugs"),
br(),
HTML("<h4>The R code for this application is available on ",
"<a href = https://github.com/fusk-kpu/StressResponseGenesAtlas > Github </a>",
". <br> To report bugs and/or request features, please use the following GitHub issue channel : <br><br>
<a href = https://github.com/fusk-kpu/StressResponseGenesAtlas/issues > https://github.com/fusk-kpu/StressResponseGenesAtlas/issues </a>"),
br(),
br(),
br(),
br(),
h1("Citation"),
br(),
HTML("<h4>If you find <strong>AtSRGA</strong>, useful, please consider citing our publication : <br><br>
Coming soon :)"),
img(src = "hexsticker_AtSRGA.png", width = "250px", height = "300px",
style="position:absolute; top:50px; right:50px;")
))
)
)
) |