Spaces:
Sleeping
Sleeping
Update app.py
Browse files
app.py
CHANGED
|
@@ -1,9 +1,10 @@
|
|
| 1 |
-
import spaces
|
| 2 |
import gradio as gr
|
| 3 |
from transformers import pipeline, TextIteratorStreamer
|
| 4 |
import torch
|
| 5 |
import threading
|
|
|
|
| 6 |
|
|
|
|
| 7 |
# Load model and tokenizer
|
| 8 |
model_name = "krish10/Qwen3_0.6B_16bit_TA_screen"
|
| 9 |
pipe = pipeline("text-generation", model=model_name, device=0)
|
|
@@ -15,11 +16,12 @@ MAX_TOKENS = 3000
|
|
| 15 |
TEMPERATURE = 0.1
|
| 16 |
TOP_P = 0.9
|
| 17 |
|
|
|
|
| 18 |
@spaces.GPU
|
| 19 |
def respond_stream(population, intervention, comparison, outcome, study_design, summary, title, abstract):
|
| 20 |
# Validate required fields
|
| 21 |
if not title.strip() or not abstract.strip():
|
| 22 |
-
return "β Error: Title and Abstract are required."
|
| 23 |
|
| 24 |
criteria_parts = []
|
| 25 |
if population.strip():
|
|
@@ -33,8 +35,9 @@ def respond_stream(population, intervention, comparison, outcome, study_design,
|
|
| 33 |
if study_design.strip():
|
| 34 |
criteria_parts.append(f"Study design of interest = {study_design.strip()}")
|
| 35 |
|
| 36 |
-
if
|
| 37 |
-
|
|
|
|
| 38 |
|
| 39 |
# Build instruction section
|
| 40 |
instruction = "Instruction: " + "\n".join(criteria_parts)
|
|
@@ -71,31 +74,61 @@ def respond_stream(population, intervention, comparison, outcome, study_design,
|
|
| 71 |
partial_text += token
|
| 72 |
yield partial_text
|
| 73 |
|
| 74 |
-
#
|
| 75 |
-
with gr.Blocks() as demo:
|
| 76 |
-
gr.Markdown("#
|
| 77 |
-
|
| 78 |
-
|
| 79 |
-
|
| 80 |
-
|
| 81 |
-
|
| 82 |
-
|
| 83 |
-
|
| 84 |
-
|
| 85 |
-
|
| 86 |
-
|
| 87 |
-
|
| 88 |
-
|
| 89 |
-
|
| 90 |
-
|
| 91 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 92 |
|
| 93 |
generate_btn.click(
|
| 94 |
fn=respond_stream,
|
| 95 |
-
inputs=
|
| 96 |
outputs=[output_box]
|
| 97 |
)
|
|
|
|
|
|
|
|
|
|
| 98 |
|
| 99 |
-
# Launch the
|
| 100 |
if __name__ == "__main__":
|
| 101 |
demo.launch()
|
|
|
|
|
|
|
| 1 |
import gradio as gr
|
| 2 |
from transformers import pipeline, TextIteratorStreamer
|
| 3 |
import torch
|
| 4 |
import threading
|
| 5 |
+
import spaces
|
| 6 |
|
| 7 |
+
# --- Model and Tokenizer Setup (No changes needed) ---
|
| 8 |
# Load model and tokenizer
|
| 9 |
model_name = "krish10/Qwen3_0.6B_16bit_TA_screen"
|
| 10 |
pipe = pipeline("text-generation", model=model_name, device=0)
|
|
|
|
| 16 |
TEMPERATURE = 0.1
|
| 17 |
TOP_P = 0.9
|
| 18 |
|
| 19 |
+
# --- Backend Function (No changes needed) ---
|
| 20 |
@spaces.GPU
|
| 21 |
def respond_stream(population, intervention, comparison, outcome, study_design, summary, title, abstract):
|
| 22 |
# Validate required fields
|
| 23 |
if not title.strip() or not abstract.strip():
|
| 24 |
+
return "β **Error:** Title and Abstract are required fields."
|
| 25 |
|
| 26 |
criteria_parts = []
|
| 27 |
if population.strip():
|
|
|
|
| 35 |
if study_design.strip():
|
| 36 |
criteria_parts.append(f"Study design of interest = {study_design.strip()}")
|
| 37 |
|
| 38 |
+
# Ensure at least one PICOS criteria is provided if no summary exists
|
| 39 |
+
if not criteria_parts and not summary.strip():
|
| 40 |
+
return "β **Error:** You must fill out at least one of the five PICOS criteria or provide a PICO Summary."
|
| 41 |
|
| 42 |
# Build instruction section
|
| 43 |
instruction = "Instruction: " + "\n".join(criteria_parts)
|
|
|
|
| 74 |
partial_text += token
|
| 75 |
yield partial_text
|
| 76 |
|
| 77 |
+
# --- Modernized Gradio UI ---
|
| 78 |
+
with gr.Blocks(theme=gr.themes.Soft(primary_hue="blue", secondary_hue="sky")) as demo:
|
| 79 |
+
gr.Markdown("# π€ Qwen Streaming Chat: Structured Medical Abstract Evaluation")
|
| 80 |
+
gr.Markdown("Provide a study's title and abstract, and optionally add PICOS criteria to guide the model's analysis.")
|
| 81 |
+
|
| 82 |
+
with gr.Row(equal_height=False):
|
| 83 |
+
# Left Column: Main inputs (Title and Abstract)
|
| 84 |
+
with gr.Column(scale=2):
|
| 85 |
+
title = gr.Textbox(
|
| 86 |
+
label="Study Title",
|
| 87 |
+
lines=2,
|
| 88 |
+
placeholder="Enter the title of the medical study here...",
|
| 89 |
+
info="This field is required."
|
| 90 |
+
)
|
| 91 |
+
abstract = gr.Textbox(
|
| 92 |
+
label="Study Abstract",
|
| 93 |
+
lines=10,
|
| 94 |
+
placeholder="Paste the full abstract here...",
|
| 95 |
+
info="This field is required."
|
| 96 |
+
)
|
| 97 |
+
|
| 98 |
+
# Right Column: Optional PICOS criteria
|
| 99 |
+
with gr.Column(scale=1):
|
| 100 |
+
with gr.Accordion("Define PICOS Criteria (Optional)", open=False):
|
| 101 |
+
population = gr.Textbox(label="Population", info="e.g., 'patients with type 2 diabetes'")
|
| 102 |
+
intervention = gr.Textbox(label="Intervention", info="e.g., 'metformin'")
|
| 103 |
+
comparison = gr.Textbox(label="Comparison", info="e.g., 'placebo'")
|
| 104 |
+
outcome = gr.Textbox(label="Outcome", info="e.g., 'HbA1c levels'")
|
| 105 |
+
study_design = gr.Textbox(label="Study Design", info="e.g., 'randomized controlled trial'")
|
| 106 |
+
|
| 107 |
+
summary = gr.Textbox(
|
| 108 |
+
label="PICO Summary (Optional)",
|
| 109 |
+
lines=4,
|
| 110 |
+
placeholder="Alternatively, describe the PICOS criteria in a short paragraph.",
|
| 111 |
+
)
|
| 112 |
+
|
| 113 |
+
# Output and Action Buttons
|
| 114 |
+
output_box = gr.Markdown(label="Model Response", interactive=False)
|
| 115 |
+
|
| 116 |
+
with gr.Row():
|
| 117 |
+
clear_btn = gr.Button("Clear")
|
| 118 |
+
generate_btn = gr.Button("Generate", variant="primary")
|
| 119 |
+
|
| 120 |
+
# --- Button Click Handlers ---
|
| 121 |
+
all_inputs = [population, intervention, comparison, outcome, study_design, summary, title, abstract]
|
| 122 |
|
| 123 |
generate_btn.click(
|
| 124 |
fn=respond_stream,
|
| 125 |
+
inputs=all_inputs,
|
| 126 |
outputs=[output_box]
|
| 127 |
)
|
| 128 |
+
|
| 129 |
+
# The clear button resets all input fields and the output box
|
| 130 |
+
clear_btn.click(lambda: (None, None, None, None, None, None, None, None, None), outputs=all_inputs + [output_box])
|
| 131 |
|
| 132 |
+
# --- Launch the App ---
|
| 133 |
if __name__ == "__main__":
|
| 134 |
demo.launch()
|