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Update app.py
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app.py
CHANGED
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@@ -2,7 +2,7 @@ import gradio as gr
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import spaces
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import torch
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import os
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from transformers import AutoTokenizer, AutoModelForCausalLM
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# Load model from secret
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model_name = os.environ.get("MODEL_ID")
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@@ -17,11 +17,6 @@ model.eval()
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SYSTEM_PROMPT = "You are an expert biomedical assistant trained to identify randomized controlled trials (RCTs). Include RCTs and exclude non-RCTs."
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class StopOnTokens(StoppingCriteria):
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def __call__(self, input_ids, scores, **kwargs):
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# stop generation when EOS is reached
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return input_ids[0][-1] in [tokenizer.eos_token_id]
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@spaces.GPU(duration=120)
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def stream_response(title_text, abstract_text):
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user_input = f"Title: {title_text.strip()}\nAbstract: {abstract_text.strip()}"
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@@ -32,8 +27,9 @@ def stream_response(title_text, abstract_text):
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generated = inputs["input_ids"]
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past_key_values = None
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for _ in range(1024): # max
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outputs = model(input_ids=generated, past_key_values=past_key_values, use_cache=True)
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next_token_logits = outputs.logits[:, -1, :]
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next_token = torch.argmax(next_token_logits, dim=-1, keepdim=True)
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@@ -43,31 +39,30 @@ def stream_response(title_text, abstract_text):
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generated = torch.cat((generated, next_token), dim=1)
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decoded_output = tokenizer.decode(generated[0], skip_special_tokens=True)
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if "<|assistant|>" in decoded_output:
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yield
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with gr.Blocks() as demo:
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gr.Markdown("## 🧠 RCT Classifier Demonstration (Streaming)")
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chatbot = gr.Chatbot()
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with gr.Row():
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title = gr.Textbox(label="Title", placeholder="Enter
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abstract = gr.Textbox(label="Abstract", placeholder="Enter abstract", lines=6)
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submit = gr.Button("Classify")
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def
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submit.
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fn=wrapper,
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inputs=[title, abstract],
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outputs=chatbot
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)
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if __name__ == "__main__":
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demo.launch()
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import spaces
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import torch
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import os
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from transformers import AutoTokenizer, AutoModelForCausalLM
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# Load model from secret
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model_name = os.environ.get("MODEL_ID")
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SYSTEM_PROMPT = "You are an expert biomedical assistant trained to identify randomized controlled trials (RCTs). Include RCTs and exclude non-RCTs."
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@spaces.GPU(duration=120)
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def stream_response(title_text, abstract_text):
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user_input = f"Title: {title_text.strip()}\nAbstract: {abstract_text.strip()}"
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generated = inputs["input_ids"]
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past_key_values = None
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response_text = ""
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for _ in range(1024): # limit max length
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outputs = model(input_ids=generated, past_key_values=past_key_values, use_cache=True)
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next_token_logits = outputs.logits[:, -1, :]
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next_token = torch.argmax(next_token_logits, dim=-1, keepdim=True)
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generated = torch.cat((generated, next_token), dim=1)
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decoded_output = tokenizer.decode(generated[0], skip_special_tokens=True)
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if "<|assistant|>" in decoded_output:
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response_text = decoded_output.split("<|assistant|>")[-1].strip()
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yield response_text
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with gr.Blocks() as demo:
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gr.Markdown("## 🧠 RCT Classifier Demonstration (Streaming Enabled)")
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chatbot = gr.Chatbot()
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with gr.Row():
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title = gr.Textbox(label="Title", placeholder="Enter title")
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abstract = gr.Textbox(label="Abstract", placeholder="Enter abstract", lines=6)
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submit = gr.Button("Classify")
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def stream_chat(title_text, abstract_text):
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user_message = f"Title: {title_text.strip()}\nAbstract: {abstract_text.strip()}"
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yield (user_message, "") # show user message
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response_stream = stream_response(title_text, abstract_text)
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collected = ""
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for partial in response_stream:
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collected = partial
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yield (user_message, collected)
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submit.stream(fn=stream_chat, inputs=[title, abstract], outputs=chatbot)
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if __name__ == "__main__":
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demo.launch()
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