Spaces:
Running
Running
Rename example images
Browse files- README.md +1 -1
- app.py +1 -1
- data/{dirty.png β example.png} +0 -0
- data/{dirty.tiff β example.tiff} +0 -0
- test.ipynb +1 -1
README.md
CHANGED
|
@@ -17,7 +17,7 @@ inpainting.
|
|
| 17 |
|
| 18 |
```bash
|
| 19 |
uv sync
|
| 20 |
-
uv run python main.py data/
|
| 21 |
```
|
| 22 |
|
| 23 |
PNG, JPEG, TIFF, and TIF inputs are supported. Cleaned images are written to
|
|
|
|
| 17 |
|
| 18 |
```bash
|
| 19 |
uv sync
|
| 20 |
+
uv run python main.py data/example.png
|
| 21 |
```
|
| 22 |
|
| 23 |
PNG, JPEG, TIFF, and TIF inputs are supported. Cleaned images are written to
|
app.py
CHANGED
|
@@ -14,7 +14,7 @@ from cleaning import (
|
|
| 14 |
)
|
| 15 |
|
| 16 |
_BATCH_OUTPUTS = tempfile.TemporaryDirectory(prefix="ihc-cleaner-")
|
| 17 |
-
_EXAMPLE_IMAGES = [["data/
|
| 18 |
_IMAGE_FILE_TYPES = ["image", ".tif", ".tiff"]
|
| 19 |
_PREVIEW_MAX_DIMENSION = 1200
|
| 20 |
|
|
|
|
| 14 |
)
|
| 15 |
|
| 16 |
_BATCH_OUTPUTS = tempfile.TemporaryDirectory(prefix="ihc-cleaner-")
|
| 17 |
+
_EXAMPLE_IMAGES = [["data/example.png"], ["data/example.tiff"]]
|
| 18 |
_IMAGE_FILE_TYPES = ["image", ".tif", ".tiff"]
|
| 19 |
_PREVIEW_MAX_DIMENSION = 1200
|
| 20 |
|
data/{dirty.png β example.png}
RENAMED
|
File without changes
|
data/{dirty.tiff β example.tiff}
RENAMED
|
File without changes
|
test.ipynb
CHANGED
|
@@ -83,7 +83,7 @@
|
|
| 83 |
"source": [
|
| 84 |
"img = io.imread(\"data/A-4.ome.tiff\")[:, :, :3]\n",
|
| 85 |
"dirty, mask = add_debris(img, n_debris=60)\n",
|
| 86 |
-
"io.imsave(\"data/
|
| 87 |
"io.imsave(\"data/original.tiff\", img)\n",
|
| 88 |
"\n",
|
| 89 |
"fig, axs = plt.subplots(1, 3, figsize=(12, 4))\n",
|
|
|
|
| 83 |
"source": [
|
| 84 |
"img = io.imread(\"data/A-4.ome.tiff\")[:, :, :3]\n",
|
| 85 |
"dirty, mask = add_debris(img, n_debris=60)\n",
|
| 86 |
+
"io.imsave(\"data/example.tiff\", dirty)\n",
|
| 87 |
"io.imsave(\"data/original.tiff\", img)\n",
|
| 88 |
"\n",
|
| 89 |
"fig, axs = plt.subplots(1, 3, figsize=(12, 4))\n",
|