kyauy commited on
Commit
880e48d
·
1 Parent(s): 23a300c

fix(summarization): #1 add pregnancy as unsafe marker

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Files changed (1) hide show
  1. clinphen_src/get_phenotypes_lf.py +1 -1
clinphen_src/get_phenotypes_lf.py CHANGED
@@ -95,7 +95,7 @@ def load_medical_record_subsentences(medical_record):
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  #Checks the given sentence for any flags from the lists you indicate.
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  negative_flags = ["no", "not", "none", "negative", "non", "never", "without", "denies", "haven't", "don't", "doesn't", "haven t", "don t", "doesn t", 'didn t', 'doesn', 'don', 'haven', 'didn']
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- family_flags = ["<person>","<person","cousin", "parent", "mom", "mother", "dad", "father", "grandmother", "grandfather", "grandparent", "family", "brother", "sister", "sibling", "uncle", "aunt", "nephew", "niece", "son", "daughter", "grandchild"]
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  healthy_flags = ["normal"]
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  disease_flags = ["associated", "gene", "recessive", "dominant", "variant", "cause", "literature", "individuals"]
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  treatment_flags = []
 
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  #Checks the given sentence for any flags from the lists you indicate.
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  negative_flags = ["no", "not", "none", "negative", "non", "never", "without", "denies", "haven't", "don't", "doesn't", "haven t", "don t", "doesn t", 'didn t', 'doesn', 'don', 'haven', 'didn']
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+ family_flags = ["<person>","<person","cousin", "parent", "mom", "mother", "dad", "father", "grandmother", "grandfather", "grandparent", "family", "brother", "sister", "sibling", "uncle", "aunt", "nephew", "niece", "son", "daughter", "grandchild", "pregnancy"]
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  healthy_flags = ["normal"]
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  disease_flags = ["associated", "gene", "recessive", "dominant", "variant", "cause", "literature", "individuals"]
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  treatment_flags = []