upload rest of files

.dockerignore

@@ -0,0 +1,24 @@
+__pycache__/
+*.py[cod]
+*$py.class
+*.so
+.Python
+.git/
+.gitignore
+.env
+.venv
+env/
+venv/
+*.egg-info/
+.eggs/
+dist/
+build/
+*.log
+.DS_Store
+Thumbs.db
+*.swp
+*.swo
+*~
+.idea/
+.vscode/
+*.ipynb_checkpoints

.gitattributes

@@ -33,3 +33,4 @@ saved_model/**/* filter=lfs diff=lfs merge=lfs -text
 *.zip filter=lfs diff=lfs merge=lfs -text
 *.zst filter=lfs diff=lfs merge=lfs -text
 *tfevents* filter=lfs diff=lfs merge=lfs -text
+logo-epita.png filter=lfs diff=lfs merge=lfs -text

.gitignore

@@ -0,0 +1,24 @@
+__pycache__/
+*.py[cod]
+*$py.class
+*.so
+.Python
+.git/
+.env
+.venv
+env/
+venv/
+*.egg-info/
+.eggs/
+dist/
+build/
+*.log
+.DS_Store
+Thumbs.db
+*.swp
+*.swo
+*~
+.idea/
+.vscode/
+*.ipynb_checkpoints
+local_code_index_db/

Dockerfile

@@ -0,0 +1,47 @@
+FROM python:3.13-slim
+
+# Set environment variables
+ENV PYTHONUNBUFFERED=1
+ENV PYTHONDONTWRITEBYTECODE=1
+ENV GRADIO_SERVER_NAME=0.0.0.0
+ENV GRADIO_SERVER_PORT=7860
+
+# System dependencies
+RUN apt-get update && apt-get install -y --no-install-recommends \
+    clang \
+    llvm-dev \
+    build-essential \
+    curl \
+    git \
+    pkg-config \
+    wget \
+    ca-certificates \
+    && rm -rf /var/lib/apt/lists/*
+
+# Create a non-root user for HuggingFace Spaces
+RUN useradd -m -u 1000 user
+WORKDIR /app
+
+# Copy requirements first for better caching
+COPY requirements.txt /app/requirements.txt
+
+# Install Python dependencies
+RUN pip install --no-cache-dir -r /app/requirements.txt && \
+    pip install --no-cache-dir libclang
+
+# Copy application code (excluding large data files)
+COPY --chown=user:user . /app
+
+# Set ownership
+RUN chown -R user:user /app
+
+# Switch to non-root user
+USER user
+
+# Expose the Gradio port
+EXPOSE 7860
+
+# Default command - can be overridden to use --hf-dataset instead of --graph-file
+# To use HuggingFace dataset: --hf-dataset "username/dataset-name"
+# To use local file: --graph-file "/app/data/multihop_knowledge_graph_with_embeddings.json"
+CMD ["python", "-u", "gradio_mcp_space.py"]

requirements.txt

@@ -0,0 +1,255 @@
+aiofiles==24.1.0
+aiohappyeyeballs==2.6.1
+aiohttp==3.13.2
+aioitertools==0.12.0
+aiosignal==1.4.0
+aiosqlite==0.21.0
+alembic==1.17.1
+annotated-doc==0.0.3
+annotated-types==0.7.0
+anyio==4.11.0
+arize-phoenix==12.9.0
+arize-phoenix-client==1.21.0
+arize-phoenix-evals==2.5.0
+arize-phoenix-otel==0.13.1
+attrs==25.4.0
+audioop-lts==0.2.2
+Authlib==1.6.5
+backoff==2.2.1
+bcrypt==5.0.0
+beartype==0.22.5
+beautifulsoup4==4.14.2
+brotli==1.2.0
+bs4==0.0.2
+build==1.3.0
+cachetools==6.2.1
+certifi==2025.10.5
+cffi==2.0.0
+charset-normalizer==3.4.4
+chromadb==1.3.0
+clang==20.1.5
+click==8.3.0
+coloredlogs==15.0.1
+contourpy==1.3.3
+cryptography==46.0.3
+cycler==0.12.1
+cyclopts==4.2.1
+datasets==4.4.1
+ddgs==9.7.1
+deprecation==2.1.0
+dill==0.4.0
+diskcache==5.6.3
+distro==1.9.0
+dnspython==2.8.0
+docstring_parser==0.17.0
+docutils==0.22.2
+durationpy==0.10
+email-validator==2.3.0
+esprima==4.0.1
+exceptiongroup==1.3.0
+fastapi==0.121.0
+ffmpy==1.0.0
+filelock==3.20.0
+flatbuffers==25.9.23
+fonttools==4.60.1
+frozenlist==1.8.0
+fsspec==2025.9.0
+google-auth==2.42.0
+googleapis-common-protos==1.71.0
+gradio==5.49.1
+gradio_client==1.13.3
+graphql-core==3.2.7
+greenlet==3.2.4
+groovy==0.1.2
+grpc-interceptor==0.15.4
+grpcio==1.76.0
+h11==0.16.0
+h2==4.3.0
+hf-xet==1.2.0
+hpack==4.1.0
+httpcore==1.0.9
+httptools==0.7.1
+httpx==0.28.1
+httpx-sse==0.4.3
+huggingface-hub==0.36.0
+humanfriendly==10.0
+hyperframe==6.1.0
+idna==3.11
+importlib_metadata==8.7.0
+importlib_resources==6.5.2
+iniconfig==2.3.0
+jaraco.classes==3.4.0
+jaraco.context==6.0.1
+jaraco.functools==4.3.0
+javalang==0.13.0
+jeepney==0.9.0
+Jinja2==3.1.6
+jiter==0.11.1
+jmespath==1.0.1
+joblib==1.5.2
+jsonpatch==1.33
+jsonpath-ng==1.7.0
+jsonpointer==3.0.0
+jsonref==1.1.0
+jsonschema==4.25.1
+jsonschema-path==0.3.4
+jsonschema-specifications==2025.9.1
+keyring==25.6.0
+kiwisolver==1.4.9
+kubernetes==34.1.0
+lance-namespace==0.0.21
+lance-namespace-urllib3-client==0.0.21
+lancedb==0.25.3
+langchain-core==1.0.1
+langchain-text-splitters==1.0.0
+langfuse==3.9.0
+langsmith==0.4.38
+lxml==6.0.2
+Mako==1.3.10
+markdown-it-py==4.0.0
+MarkupSafe==3.0.3
+matplotlib==3.10.7
+mcp==1.10.1
+mcpadapt==0.1.20
+mdurl==0.1.2
+mmh3==5.2.0
+more-itertools==10.8.0
+mpmath==1.3.0
+multidict==6.7.0
+multiprocess==0.70.18
+nest-asyncio==1.6.0
+networkx==3.5
+numpy==2.3.4
+nvidia-cublas-cu12==12.8.4.1
+nvidia-cuda-cupti-cu12==12.8.90
+nvidia-cuda-nvrtc-cu12==12.8.93
+nvidia-cuda-runtime-cu12==12.8.90
+nvidia-cudnn-cu12==9.10.2.21
+nvidia-cufft-cu12==11.3.3.83
+nvidia-cufile-cu12==1.13.1.3
+nvidia-curand-cu12==10.3.9.90
+nvidia-cusolver-cu12==11.7.3.90
+nvidia-cusparse-cu12==12.5.8.93
+nvidia-cusparselt-cu12==0.7.1
+nvidia-nccl-cu12==2.27.5
+nvidia-nvjitlink-cu12==12.8.93
+nvidia-nvshmem-cu12==3.3.20
+nvidia-nvtx-cu12==12.8.90
+oauthlib==3.3.1
+onnxruntime==1.23.2
+openai==2.6.1
+openapi-pydantic==0.5.1
+openinference-instrumentation==0.1.42
+openinference-instrumentation-smolagents==0.1.19
+openinference-semantic-conventions==0.1.25
+opentelemetry-api==1.38.0
+opentelemetry-exporter-otlp==1.38.0
+opentelemetry-exporter-otlp-proto-common==1.38.0
+opentelemetry-exporter-otlp-proto-grpc==1.38.0
+opentelemetry-exporter-otlp-proto-http==1.38.0
+opentelemetry-instrumentation==0.59b0
+opentelemetry-proto==1.38.0
+opentelemetry-sdk==1.38.0
+opentelemetry-semantic-conventions==0.59b0
+orjson==3.11.4
+overrides==7.7.0
+packaging==25.0
+pandas==2.3.3
+pathable==0.4.4
+pathvalidate==3.3.1
+pillow==11.3.0
+pip==25.3
+platformdirs==4.5.0
+pluggy==1.6.0
+ply==3.11
+posthog==5.4.0
+primp==0.15.0
+prometheus_client==0.23.1
+propcache==0.4.1
+protobuf==6.33.0
+psutil==7.1.3
+py-key-value-aio==0.2.8
+py-key-value-shared==0.2.8
+pyarrow==22.0.0
+pyasn1==0.6.1
+pyasn1_modules==0.4.2
+pybase64==1.4.2
+pycparser==2.23
+pydantic==2.11.10
+pydantic_core==2.33.2
+pydantic-settings==2.11.0
+pydub==0.25.1
+Pygments==2.19.2
+PyJWT==2.10.1
+pylance==0.39.0
+pyparsing==3.2.5
+pyperclip==1.11.0
+PyPika==0.48.9
+pyproject_hooks==1.2.0
+pystache==0.6.8
+pytest==8.4.2
+python-dateutil==2.9.0.post0
+python-dotenv==1.2.1
+python-multipart==0.0.20
+pytz==2025.2
+PyYAML==6.0.3
+referencing==0.36.2
+regex==2025.10.23
+requests==2.32.5
+requests-oauthlib==2.0.0
+requests-toolbelt==1.0.0
+rich==14.2.0
+rich-rst==1.3.2
+rpds-py==0.28.0
+rsa==4.9.1
+ruff==0.14.5
+safehttpx==0.1.7
+safetensors==0.6.2
+scikit-learn==1.7.2
+scipy==1.16.3
+SecretStorage==3.4.0
+semantic-version==2.10.0
+sentence-transformers==5.1.2
+setuptools==80.9.0
+shellingham==1.5.4
+six==1.17.0
+smolagents==1.22.0
+sniffio==1.3.1
+socksio==1.0.0
+soupsieve==2.8
+SQLAlchemy==2.0.44
+sqlean.py==3.50.4.5
+sse-starlette==3.0.3
+starlette==0.49.3
+strawberry-graphql==0.270.1
+sympy==1.14.0
+tantivy==0.25.0
+tenacity==9.1.2
+threadpoolctl==3.6.0
+tokenizers==0.22.1
+tomlkit==0.13.3
+torch==2.9.0
+tqdm==4.67.1
+transformers==4.57.1
+tree-sitter==0.25.2
+tree-sitter-rust==0.24.0
+triton==3.5.0
+typer==0.20.0
+typer-slim==0.20.0
+typing_extensions==4.15.0
+typing-inspection==0.4.2
+tzdata==2025.2
+urllib3==2.3.0
+uvicorn==0.38.0
+uvloop==0.22.1
+validators==0.35.0
+watchfiles==1.1.1
+weaviate-client==4.17.0
+websocket-client==1.9.0
+websockets==15.0.1
+wheel==0.45.1
+wrapt==1.17.3
+xxhash==3.6.0
+yarl==1.22.0
+zipp==3.23.0
+zstandard==0.25.0