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Major changes for efficiency, detail and presentation
Browse files- meta_plotting.py +8 -8
- meta_utils.py +20 -9
- metagraph.py +0 -169
- multistats.py +162 -62
meta_plotting.py
CHANGED
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@@ -1,7 +1,7 @@
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import numpy as np
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import plotly.express as px
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-
def plot_trace(df, col='emission', agg='mean', ntop=10, hotkeys=None, hotkey_regex=None, abbrev=8, type='Miners'):
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if hotkeys is not None:
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df = df.loc[df.hotkey.isin(hotkeys)]
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@@ -10,14 +10,14 @@ def plot_trace(df, col='emission', agg='mean', ntop=10, hotkeys=None, hotkey_reg
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top_miners = df.groupby('hotkey')[col].agg(agg).sort_values(ascending=False)
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stats = df.loc[df.hotkey.isin(top_miners.index[:ntop])].sort_values(by=
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stats['hotkey_abbrev'] = stats.hotkey.str[:abbrev]
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stats['coldkey_abbrev'] = stats.coldkey.str[:abbrev]
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stats['rank'] = stats.hotkey.map({k:i for i,k in enumerate(top_miners.index, start=1)})
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return px.line(stats.sort_values(by=[
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x=
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hover_data=['hotkey','rank'],
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labels={col:col.title(),'timestamp':'','coldkey_abbrev':f'Coldkey (first {abbrev} chars)','hotkey_abbrev':f'Hotkey (first {abbrev} chars)'},
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title=f'Top {ntop} {type}, by {col.title()}',
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@@ -25,18 +25,18 @@ def plot_trace(df, col='emission', agg='mean', ntop=10, hotkeys=None, hotkey_reg
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).update_traces(opacity=0.7)
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-
def plot_cabals(df, sel_col='coldkey', count_col='hotkey', values=None, ntop=10, abbr=8):
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if values is None:
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values = df[sel_col].value_counts().sort_values(ascending=False).index[:ntop].tolist()
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print(f'Automatically selected {sel_col!r} = {values!r}')
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df = df.loc[df[sel_col].isin(values)]
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rates = df.groupby([
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abbr_col = f'{sel_col} (first {abbr} chars)'
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rates[abbr_col] = rates[sel_col].str[:abbr]
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return px.line(rates.melt(id_vars=[
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x=
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#facet_col='variable', facet_col_wrap=1,
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labels={'value':f'Number of Unique {count_col.title()}s per {sel_col.title()}','timestamp':''},
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category_orders={abbr_col:[ v[:abbr] for v in values]},
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import numpy as np
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import plotly.express as px
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+
def plot_trace(df, col='emission', agg='mean', time_col='timestamp', ntop=10, hotkeys=None, hotkey_regex=None, abbrev=8, type='Miners'):
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if hotkeys is not None:
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df = df.loc[df.hotkey.isin(hotkeys)]
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top_miners = df.groupby('hotkey')[col].agg(agg).sort_values(ascending=False)
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stats = df.loc[df.hotkey.isin(top_miners.index[:ntop])].sort_values(by=time_col)
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stats['hotkey_abbrev'] = stats.hotkey.str[:abbrev]
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stats['coldkey_abbrev'] = stats.coldkey.str[:abbrev]
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stats['rank'] = stats.hotkey.map({k:i for i,k in enumerate(top_miners.index, start=1)})
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return px.line(stats.sort_values(by=[time_col,'rank']),
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x=time_col, y=col, color='coldkey_abbrev', line_group='hotkey_abbrev',
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hover_data=['hotkey','rank'],
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labels={col:col.title(),'timestamp':'','coldkey_abbrev':f'Coldkey (first {abbrev} chars)','hotkey_abbrev':f'Hotkey (first {abbrev} chars)'},
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title=f'Top {ntop} {type}, by {col.title()}',
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).update_traces(opacity=0.7)
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+
def plot_cabals(df, sel_col='coldkey', count_col='hotkey', time_col='timestamp', values=None, ntop=10, abbr=8):
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if values is None:
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values = df[sel_col].value_counts().sort_values(ascending=False).index[:ntop].tolist()
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print(f'Automatically selected {sel_col!r} = {values!r}')
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df = df.loc[df[sel_col].isin(values)]
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rates = df.groupby([time_col,sel_col])[count_col].nunique().reset_index()
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abbr_col = f'{sel_col} (first {abbr} chars)'
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rates[abbr_col] = rates[sel_col].str[:abbr]
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return px.line(rates.melt(id_vars=[time_col,sel_col,abbr_col]),
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x=time_col, y='value', color=abbr_col,
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#facet_col='variable', facet_col_wrap=1,
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labels={'value':f'Number of Unique {count_col.title()}s per {sel_col.title()}','timestamp':''},
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category_orders={abbr_col:[ v[:abbr] for v in values]},
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meta_utils.py
CHANGED
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@@ -1,10 +1,15 @@
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import os
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import glob
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import tqdm
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import pickle
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import subprocess
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import pandas as pd
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def run_subprocess(*args):
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# Trigger the multigraph.py script to run and save metagraph snapshots
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@@ -18,31 +23,37 @@ def load_metagraph(path, extra_cols=None, rm_cols=None):
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df = pd.DataFrame(metagraph.axons)
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df['block'] = metagraph.block.item()
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df['difficulty'] = metagraph.difficulty
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for c in extra_cols:
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vals = getattr(metagraph,c)
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df[c] = vals
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return df.drop(columns=rm_cols)
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-
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def load_metagraphs(block_start, block_end, block_step=1000, datadir='data/metagraph/1/', extra_cols=None):
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if extra_cols is None:
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extra_cols = ['total_stake','ranks','incentive','emission','consensus','trust','validator_trust','dividends']
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blocks = range(block_start, block_end, block_step)
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-
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metagraphs = []
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pbar = tqdm.tqdm(filenames)
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for filename in pbar:
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pbar.set_description(f'Processing {filename}')
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-
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return pd.concat(metagraphs)
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-
load_metagraphs(block_start=700_000, block_end=800_000, block_step=1000)
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import os
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import glob
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import tqdm
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import dill as pickle
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import subprocess
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import pandas as pd
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import datetime
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from functools import lru_cache
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block_time_500k = datetime.datetime(2023, 5, 29, 5, 29, 0)
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block_time_800k = datetime.datetime(2023, 7, 9, 21, 32, 48)
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dt = (pd.Timestamp(block_time_800k)-pd.Timestamp(block_time_500k))/(800_000-500_000)
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def run_subprocess(*args):
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# Trigger the multigraph.py script to run and save metagraph snapshots
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df = pd.DataFrame(metagraph.axons)
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df['block'] = metagraph.block.item()
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df['timestamp'] = block_time_500k + dt*(df['block']-500_000)
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df['difficulty'] = metagraph.difficulty
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for c in extra_cols:
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vals = getattr(metagraph,c)
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df[c] = vals
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return df.drop(columns=rm_cols)
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+
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@lru_cache(maxsize=16)
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def load_metagraphs(block_start, block_end, block_step=1000, datadir='data/metagraph/1/', extra_cols=None):
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if extra_cols is None:
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extra_cols = ['total_stake','ranks','incentive','emission','consensus','trust','validator_trust','dividends']
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blocks = range(block_start, block_end, block_step)
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print(f'Loading blocks {blocks[0]}-{blocks[-1]} from {datadir}')
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filenames = sorted(filename for filename in os.listdir(datadir) if int(filename.split('.')[0]) in blocks)
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print(f'Found {len(filenames)} files in {datadir}')
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metagraphs = []
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pbar = tqdm.tqdm(filenames)
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for filename in pbar:
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pbar.set_description(f'Processing {filename}')
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try:
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metagraph = load_metagraph(os.path.join(datadir, filename), extra_cols=extra_cols, rm_cols=['protocol','placeholder1','placeholder2'])
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metagraphs.append(metagraph)
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except Exception as e:
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print(f'filename {filename!r} generated an exception: { e }')
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return pd.concat(metagraphs)
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metagraph.py
DELETED
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@@ -1,169 +0,0 @@
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import streamlit as st
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from meta_utils import run_subprocess, load_metagraphs
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# from opendashboards.assets import io, inspect, metric, plot
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from meta_plotting import plot_trace, plot_cabals
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DEFAULT_SRC = 'miner'
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DEFAULT_NTOP = 10
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DEFAULT_UID_NTOP = 10
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# Set app config
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st.set_page_config(
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page_title='Validator Dashboard',
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menu_items={
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'Report a bug': "https://github.com/opentensor/dashboards/issues",
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'About': """
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This dashboard is part of the OpenTensor project. \n
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"""
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},
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layout = "centered"
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)
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st.title('Metagraph :red[Analysis] Dashboard :eyes:')
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# add vertical space
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st.markdown('#')
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st.markdown('#')
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with st.spinner(text=f'Loading data...'):
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df = load_metagraphs()
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blocks = df.block.unique()
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-
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# metric.wandb(df_runs)
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# add vertical space
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st.markdown('#')
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st.markdown('#')
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tab1, tab2, tab3, tab4 = st.tabs(["Health", "Miners", "Validators", "Block"])
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### Wandb Runs ###
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with tab1:
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st.markdown('#')
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st.header(":violet[Wandb] Runs")
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run_msg = st.info("Select a single run or compare multiple runs")
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selected_runs = st.multiselect(f'Runs ({len(df_runs)})', df_runs.id, default=DEFAULT_SELECTED_RUNS, key='runs')
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# Load data if new runs selected
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if not selected_runs:
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# open a dialog to select runs
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run_msg.error("Please select at least one run")
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st.snow()
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st.stop()
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-
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df = io.load_data(df_runs.loc[df_runs.id.isin(selected_runs)], load=True, save=True)
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df_long = inspect.explode_data(df)
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df_weights = inspect.weights(df)
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metric.runs(df, df_long, selected_runs)
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with st.expander(f'Show :violet[raw] data for {len(selected_runs)} selected runs'):
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inspect.run_event_data(df_runs,df, selected_runs)
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### UID Health ###
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with tab2:
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st.markdown('#')
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st.header("UID :violet[Health]")
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st.info(f"Showing UID health metrics for **{len(selected_runs)} selected runs**")
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uid_src = st.radio('Select one:', ['followup', 'answer'], horizontal=True, key='uid_src')
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-
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metric.uids(df_long, uid_src)
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-
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with st.expander(f'Show UID **{uid_src}** weights data for **{len(selected_runs)} selected runs**'):
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uids = st.multiselect('UID:', sorted(df_long[f'{uid_src}_uids'].unique()), key='uid')
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st.markdown('#')
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st.subheader(f"UID {uid_src.title()} :violet[Weights]")
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plot.weights(
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df_weights,
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uids=uids,
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)
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with st.expander(f'Show UID **{uid_src}** leaderboard data for **{len(selected_runs)} selected runs**'):
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st.markdown('#')
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st.subheader(f"UID {uid_src.title()} :violet[Leaderboard]")
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uid_col1, uid_col2 = st.columns(2)
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uid_ntop = uid_col1.slider('Number of UIDs:', min_value=1, max_value=50, value=DEFAULT_UID_NTOP, key='uid_ntop')
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uid_agg = uid_col2.selectbox('Aggregation:', ('mean','min','max','size','nunique'), key='uid_agg')
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-
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plot.leaderboard(
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df,
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ntop=uid_ntop,
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group_on=f'{uid_src}_uids',
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agg_col=f'{uid_src}_rewards',
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agg=uid_agg
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)
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with st.expander(f'Show UID **{uid_src}** diversity data for **{len(selected_runs)} selected runs**'):
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st.markdown('#')
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st.subheader(f"UID {uid_src.title()} :violet[Diversity]")
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rm_failed = st.checkbox(f'Remove failed **{uid_src}** completions', value=True)
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plot.uid_diversty(df, rm_failed)
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### Completions ###
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with tab3:
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st.markdown('#')
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st.subheader('Completion :violet[Leaderboard]')
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completion_info = st.empty()
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msg_col1, msg_col2 = st.columns(2)
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completion_src = msg_col1.radio('Select one:', ['followup', 'answer'], horizontal=True, key='completion_src')
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completion_info.info(f"Showing **{completion_src}** completions for **{len(selected_runs)} selected runs**")
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completion_ntop = msg_col2.slider('Top k:', min_value=1, max_value=50, value=DEFAULT_COMPLETION_NTOP, key='completion_ntop')
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completion_col = f'{completion_src}_completions'
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reward_col = f'{completion_src}_rewards'
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uid_col = f'{completion_src}_uids'
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completions = inspect.completions(df_long, completion_col)
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# Get completions with highest average rewards
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plot.leaderboard(
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df,
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ntop=completion_ntop,
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group_on=completion_col,
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agg_col=reward_col,
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agg='mean',
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alias=True
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)
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with st.expander(f'Show **{completion_src}** completion rewards data for **{len(selected_runs)} selected runs**'):
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st.markdown('#')
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st.subheader('Completion :violet[Rewards]')
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completion_select = st.multiselect('Completions:', completions.index, default=completions.index[:3].tolist())
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# completion_regex = st.text_input('Completion regex:', value='', key='completion_regex')
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plot.completion_rewards(
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df,
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completion_col=completion_col,
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reward_col=reward_col,
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uid_col=uid_col,
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ntop=completion_ntop,
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completions=completion_select,
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)
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### Prompt-based scoring ###
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with tab4:
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# coming soon
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st.info('Prompt-based scoring coming soon')
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# st.dataframe(df_long_long.filter(regex=prompt_src).head())
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multistats.py
CHANGED
|
@@ -1,23 +1,24 @@
|
|
| 1 |
import os
|
| 2 |
-
import warnings
|
| 3 |
import re
|
|
|
|
| 4 |
import tqdm
|
| 5 |
import wandb
|
| 6 |
-
from traceback import
|
| 7 |
import plotly.express as px
|
| 8 |
import pandas as pd
|
| 9 |
from concurrent.futures import ProcessPoolExecutor
|
| 10 |
|
| 11 |
import opendashboards.utils.utils as utils
|
|
|
|
| 12 |
|
| 13 |
from IPython.display import display
|
| 14 |
|
| 15 |
api= wandb.Api(timeout=60)
|
| 16 |
wandb.login(anonymous="allow")
|
| 17 |
|
| 18 |
-
def pull_wandb_runs(project='openvalidators', filters=None, min_steps=50, max_steps=100_000, ntop=10, summary_filters=None ):
|
| 19 |
# TODO: speed this up by storing older runs
|
| 20 |
-
|
| 21 |
all_runs = api.runs(project, filters=filters)
|
| 22 |
print(f'Using {ntop}/{len(all_runs)} runs with more than {min_steps} events')
|
| 23 |
pbar = tqdm.tqdm(all_runs)
|
|
@@ -29,6 +30,8 @@ def pull_wandb_runs(project='openvalidators', filters=None, min_steps=50, max_st
|
|
| 29 |
summary = run.summary
|
| 30 |
if summary_filters is not None and not summary_filters(summary):
|
| 31 |
continue
|
|
|
|
|
|
|
| 32 |
step = summary.get('_step',0)
|
| 33 |
if step < min_steps or step > max_steps:
|
| 34 |
# warnings.warn(f'Skipped run `{run.name}` because it contains {step} events (<{min_steps})')
|
|
@@ -60,6 +63,7 @@ def pull_wandb_runs(project='openvalidators', filters=None, min_steps=50, max_st
|
|
| 60 |
'start_time': pd.to_datetime(end_time-duration, unit="s"),
|
| 61 |
'end_time': pd.to_datetime(end_time, unit="s"),
|
| 62 |
'duration': pd.to_timedelta(duration, unit="s").round('s'),
|
|
|
|
| 63 |
**tags
|
| 64 |
})
|
| 65 |
n_events += step
|
|
@@ -85,38 +89,60 @@ def plot_gantt(df_runs):
|
|
| 85 |
fig.update_yaxes(tickfont_size=8, title='')
|
| 86 |
fig.show()
|
| 87 |
|
| 88 |
-
def load_data(run_id, run_path=None, load=True, save=False, timeout=30):
|
| 89 |
|
| 90 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 91 |
|
| 92 |
if load and os.path.exists(file_path):
|
| 93 |
-
df = pd.
|
| 94 |
# filter out events with missing step length
|
| 95 |
df = df.loc[df.step_length.notna()]
|
| 96 |
|
| 97 |
# detect list columns which as stored as strings
|
| 98 |
list_cols = [c for c in df.columns if df[c].dtype == "object" and df[c].str.startswith("[").all()]
|
| 99 |
# convert string representation of list to list
|
| 100 |
-
df[list_cols] = df[list_cols].
|
|
|
|
|
|
|
|
|
|
|
|
|
| 101 |
|
| 102 |
else:
|
| 103 |
# Download the history from wandb and add metadata
|
| 104 |
run = api.run(run_path)
|
| 105 |
df = pd.DataFrame(list(run.scan_history()))
|
| 106 |
|
|
|
|
|
|
|
|
|
|
| 107 |
print(f'Downloaded {df.shape[0]} events from {run_path!r} with id {run_id!r}')
|
| 108 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 109 |
if save:
|
| 110 |
-
df.
|
| 111 |
|
| 112 |
# Convert timestamp to datetime.
|
| 113 |
df._timestamp = pd.to_datetime(df._timestamp, unit="s")
|
| 114 |
return df.sort_values("_timestamp")
|
| 115 |
|
| 116 |
|
| 117 |
-
def calculate_stats(df_long,
|
| 118 |
|
| 119 |
df_long._timestamp = pd.to_datetime(df_long._timestamp)
|
|
|
|
| 120 |
# if dataframe has columns such as followup_completions and answer_completions, convert to multiple rows
|
| 121 |
if 'completions' not in df_long.columns:
|
| 122 |
df_long.set_index(['_timestamp','run_id'], inplace=True)
|
|
@@ -126,79 +152,144 @@ def calculate_stats(df_long, rm_failed=True, rm_zero_reward=True, freq='H', save
|
|
| 126 |
])
|
| 127 |
df_long = df_schema.reset_index()
|
| 128 |
|
| 129 |
-
if rm_failed:
|
| 130 |
-
df_long = df_long.loc[ df_long.completions.str.len()>0 ]
|
| 131 |
-
|
| 132 |
-
if rm_zero_reward:
|
| 133 |
-
df_long = df_long.loc[ df_long.rewards>0 ]
|
| 134 |
|
| 135 |
print(f'Calculating stats for dataframe with shape {df_long.shape}')
|
| 136 |
|
|
|
|
|
|
|
|
|
|
|
|
|
| 137 |
g = df_long.groupby([pd.Grouper(key='_timestamp', axis=0, freq=freq), 'run_id'])
|
| 138 |
|
| 139 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
| 140 |
|
|
|
|
|
|
|
|
|
|
| 141 |
stats.columns = ['_'.join(c) for c in stats.columns]
|
| 142 |
-
stats['completions_diversity'] = stats['completions_nunique'] / stats['completions_count']
|
| 143 |
stats = stats.reset_index()
|
| 144 |
|
| 145 |
-
if save_path:
|
| 146 |
stats.to_csv(save_path, index=False)
|
| 147 |
|
| 148 |
return stats
|
| 149 |
|
| 150 |
|
| 151 |
-
def clean_data(df):
|
| 152 |
-
return df.dropna(subset=df.filter(regex='completions|rewards').columns, how='any').dropna(axis=1, how='all')
|
| 153 |
-
|
| 154 |
-
def explode_data(df):
|
| 155 |
-
list_cols = utils.get_list_col_lengths(df)
|
| 156 |
-
return utils.explode_data(df, list(list_cols.keys())).apply(pd.to_numeric, errors='ignore')
|
| 157 |
-
|
| 158 |
|
| 159 |
-
def process(run, load=True, save=False, freq='H'):
|
| 160 |
|
| 161 |
try:
|
| 162 |
-
|
| 163 |
stats_path = f'data/aggs/stats-{run["run_id"]}.csv'
|
| 164 |
-
if os.path.exists(stats_path):
|
| 165 |
-
print(f'Loaded stats file {stats_path}')
|
| 166 |
return pd.read_csv(stats_path)
|
| 167 |
|
| 168 |
# Load data and add extra columns from wandb run
|
| 169 |
-
|
| 170 |
run_path=run['run_path'],
|
| 171 |
load=load,
|
| 172 |
-
save=save,
|
| 173 |
-
save = (run['state'] != 'running') & run['end_time']
|
| 174 |
).assign(**run.to_dict())
|
| 175 |
-
|
| 176 |
-
|
| 177 |
-
# Remove original dataframe from memory
|
| 178 |
-
del df
|
| 179 |
# Get and save stats
|
| 180 |
-
return calculate_stats(df_long, freq=freq, save_path=stats_path)
|
| 181 |
-
|
| 182 |
except Exception as e:
|
| 183 |
-
print(f'Error processing run {run["run_id"]}: {e}')
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
|
|
|
|
|
|
| 184 |
|
| 185 |
if __name__ == '__main__':
|
| 186 |
|
| 187 |
# TODO: flag to overwrite runs that were running when downloaded and saved: check if file date is older than run end time.
|
| 188 |
-
|
|
|
|
|
|
|
|
|
|
| 189 |
filters = None# {"tags": {"$in": [f'1.1.{i}' for i in range(10)]}}
|
| 190 |
# filters={'tags': {'$in': ['5F4tQyWrhfGVcNhoqeiNsR6KjD4wMZ2kfhLj4oHYuyHbZAc3']}} # Is foundation validator
|
| 191 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 192 |
|
| 193 |
os.makedirs('data/runs/', exist_ok=True)
|
| 194 |
os.makedirs('data/aggs/', exist_ok=True)
|
| 195 |
-
|
| 196 |
-
|
| 197 |
-
display(df_runs)
|
| 198 |
-
plot_gantt(df_runs)
|
| 199 |
|
| 200 |
-
|
| 201 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 202 |
|
| 203 |
# Use tqdm to add a progress bar
|
| 204 |
results = []
|
|
@@ -208,30 +299,39 @@ if __name__ == '__main__':
|
|
| 208 |
result = future.result()
|
| 209 |
results.append(result)
|
| 210 |
except Exception as e:
|
| 211 |
-
print(f'generated an exception: {
|
| 212 |
pbar.update(1)
|
| 213 |
|
| 214 |
if not results:
|
| 215 |
raise ValueError('No runs were successfully processed.')
|
| 216 |
|
| 217 |
# Concatenate the results into a single dataframe
|
| 218 |
-
df = pd.concat(results, ignore_index=True)
|
| 219 |
|
| 220 |
df.to_csv('data/processed.csv', index=False)
|
|
|
|
| 221 |
|
| 222 |
display(df)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 223 |
|
| 224 |
-
fig = px.line(df.astype({'_timestamp':str}),
|
| 225 |
-
x='_timestamp',
|
| 226 |
-
y='completions_diversity',
|
| 227 |
-
# y=['Unique','Total'],
|
| 228 |
-
line_group='run_id',
|
| 229 |
-
# color='hotkey',
|
| 230 |
-
# color_discrete_sequence=px.colors.sequential.YlGnBu,
|
| 231 |
-
title='Completion Diversity over Time',
|
| 232 |
-
labels={'_timestamp':'', 'completions_diversity':'Diversity', 'uids':'UID','value':'counts', 'variable':'Completions'},
|
| 233 |
-
width=800, height=600,
|
| 234 |
-
template='plotly_white',
|
| 235 |
-
).update_traces(opacity=0.3)
|
| 236 |
-
fig.show()
|
| 237 |
|
|
|
|
| 1 |
import os
|
|
|
|
| 2 |
import re
|
| 3 |
+
import argparse
|
| 4 |
import tqdm
|
| 5 |
import wandb
|
| 6 |
+
from traceback import format_exc
|
| 7 |
import plotly.express as px
|
| 8 |
import pandas as pd
|
| 9 |
from concurrent.futures import ProcessPoolExecutor
|
| 10 |
|
| 11 |
import opendashboards.utils.utils as utils
|
| 12 |
+
import opendashboards.utils.aggregate as aggregate
|
| 13 |
|
| 14 |
from IPython.display import display
|
| 15 |
|
| 16 |
api= wandb.Api(timeout=60)
|
| 17 |
wandb.login(anonymous="allow")
|
| 18 |
|
| 19 |
+
def pull_wandb_runs(project='openvalidators', filters=None, min_steps=50, max_steps=100_000, ntop=10, netuid=None, summary_filters=None ):
|
| 20 |
# TODO: speed this up by storing older runs
|
| 21 |
+
|
| 22 |
all_runs = api.runs(project, filters=filters)
|
| 23 |
print(f'Using {ntop}/{len(all_runs)} runs with more than {min_steps} events')
|
| 24 |
pbar = tqdm.tqdm(all_runs)
|
|
|
|
| 30 |
summary = run.summary
|
| 31 |
if summary_filters is not None and not summary_filters(summary):
|
| 32 |
continue
|
| 33 |
+
if netuid is not None and summary.get('netuid') != netuid:
|
| 34 |
+
continue
|
| 35 |
step = summary.get('_step',0)
|
| 36 |
if step < min_steps or step > max_steps:
|
| 37 |
# warnings.warn(f'Skipped run `{run.name}` because it contains {step} events (<{min_steps})')
|
|
|
|
| 63 |
'start_time': pd.to_datetime(end_time-duration, unit="s"),
|
| 64 |
'end_time': pd.to_datetime(end_time, unit="s"),
|
| 65 |
'duration': pd.to_timedelta(duration, unit="s").round('s'),
|
| 66 |
+
'netuid': run.config.get('netuid'),
|
| 67 |
**tags
|
| 68 |
})
|
| 69 |
n_events += step
|
|
|
|
| 89 |
fig.update_yaxes(tickfont_size=8, title='')
|
| 90 |
fig.show()
|
| 91 |
|
|
|
|
| 92 |
|
| 93 |
+
def clean_data(df):
|
| 94 |
+
return df.dropna(subset=df.filter(regex='completions|rewards').columns, how='any').dropna(axis=1, how='all')
|
| 95 |
+
|
| 96 |
+
def explode_data(df):
|
| 97 |
+
list_cols = utils.get_list_col_lengths(df)
|
| 98 |
+
return utils.explode_data(df, list(list_cols.keys())).apply(pd.to_numeric, errors='ignore')
|
| 99 |
+
|
| 100 |
+
|
| 101 |
+
def load_data(run_id, run_path=None, load=True, save=False, explode=True):
|
| 102 |
+
|
| 103 |
+
file_path = os.path.join('data/runs/',f'history-{run_id}.parquet')
|
| 104 |
|
| 105 |
if load and os.path.exists(file_path):
|
| 106 |
+
df = pd.read_parquet(file_path)
|
| 107 |
# filter out events with missing step length
|
| 108 |
df = df.loc[df.step_length.notna()]
|
| 109 |
|
| 110 |
# detect list columns which as stored as strings
|
| 111 |
list_cols = [c for c in df.columns if df[c].dtype == "object" and df[c].str.startswith("[").all()]
|
| 112 |
# convert string representation of list to list
|
| 113 |
+
# df[list_cols] = df[list_cols].apply(lambda x: eval(x, {'__builtins__': None}) if pd.notna(x) else x)
|
| 114 |
+
try:
|
| 115 |
+
df[list_cols] = df[list_cols].applymap(eval, na_action='ignore')
|
| 116 |
+
except ValueError as e:
|
| 117 |
+
print(f'Error loading {file_path!r} when converting columns {list_cols} to list: {e}')
|
| 118 |
|
| 119 |
else:
|
| 120 |
# Download the history from wandb and add metadata
|
| 121 |
run = api.run(run_path)
|
| 122 |
df = pd.DataFrame(list(run.scan_history()))
|
| 123 |
|
| 124 |
+
# Remove rows with missing completions or rewards, which will be stuff related to weights
|
| 125 |
+
df.dropna(subset=df.filter(regex='completions|rewards').columns, how='any', inplace=True)
|
| 126 |
+
|
| 127 |
print(f'Downloaded {df.shape[0]} events from {run_path!r} with id {run_id!r}')
|
| 128 |
|
| 129 |
+
# Clean and explode dataframe
|
| 130 |
+
# overwrite object to free memory
|
| 131 |
+
float_cols = df.filter(regex='reward').columns
|
| 132 |
+
df = explode_data(clean_data(df)).astype({c: float for c in float_cols}).fillna({c: 0 for c in float_cols})
|
| 133 |
+
|
| 134 |
if save:
|
| 135 |
+
df.to_parquet(file_path, index=False)
|
| 136 |
|
| 137 |
# Convert timestamp to datetime.
|
| 138 |
df._timestamp = pd.to_datetime(df._timestamp, unit="s")
|
| 139 |
return df.sort_values("_timestamp")
|
| 140 |
|
| 141 |
|
| 142 |
+
def calculate_stats(df_long, freq='H', save_path=None, ntop=3 ):
|
| 143 |
|
| 144 |
df_long._timestamp = pd.to_datetime(df_long._timestamp)
|
| 145 |
+
|
| 146 |
# if dataframe has columns such as followup_completions and answer_completions, convert to multiple rows
|
| 147 |
if 'completions' not in df_long.columns:
|
| 148 |
df_long.set_index(['_timestamp','run_id'], inplace=True)
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| 152 |
])
|
| 153 |
df_long = df_schema.reset_index()
|
| 154 |
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|
| 155 |
|
| 156 |
print(f'Calculating stats for dataframe with shape {df_long.shape}')
|
| 157 |
|
| 158 |
+
# Approximate number of tokens in each completion
|
| 159 |
+
df_long['completion_num_tokens'] = (df_long['completions'].str.split().str.len() / 0.75).round()
|
| 160 |
+
|
| 161 |
+
|
| 162 |
g = df_long.groupby([pd.Grouper(key='_timestamp', axis=0, freq=freq), 'run_id'])
|
| 163 |
|
| 164 |
+
# TODO: use named aggregations
|
| 165 |
+
reward_aggs = ['sum','mean','std','median','max',aggregate.nonzero_rate, aggregate.nonzero_mean, aggregate.nonzero_std, aggregate.nonzero_median]
|
| 166 |
+
aggs = {
|
| 167 |
+
'completions': ['nunique','count', aggregate.diversity, aggregate.successful_diversity, aggregate.success_rate],
|
| 168 |
+
'completion_num_tokens': ['mean', 'std', 'median', 'max'],
|
| 169 |
+
**{k: reward_aggs for k in df_long.filter(regex='reward')}
|
| 170 |
+
}
|
| 171 |
+
|
| 172 |
+
# Calculate tokens per second
|
| 173 |
+
if 'completion_times' in df_long.columns:
|
| 174 |
+
df_long['tokens_per_sec'] = df_long['completion_num_tokens']/df_long['completion_times']
|
| 175 |
+
aggs.update({
|
| 176 |
+
'completion_times': ['mean','std','median','min','max'],
|
| 177 |
+
'tokens_per_sec': ['mean','std','median','max'],
|
| 178 |
+
})
|
| 179 |
|
| 180 |
+
stats = g.agg(aggs)
|
| 181 |
+
stats = stats.merge(g.apply(aggregate.top_stats, exclude='', ntop=ntop).reset_index(level=1,drop=True), left_index=True, right_index=True)
|
| 182 |
+
# flatten multiindex columns
|
| 183 |
stats.columns = ['_'.join(c) for c in stats.columns]
|
|
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|
| 184 |
stats = stats.reset_index()
|
| 185 |
|
| 186 |
+
if save_path:
|
| 187 |
stats.to_csv(save_path, index=False)
|
| 188 |
|
| 189 |
return stats
|
| 190 |
|
| 191 |
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|
| 192 |
|
| 193 |
+
def process(run, load=True, save=False, load_stats=True, freq='H', ntop=3):
|
| 194 |
|
| 195 |
try:
|
| 196 |
+
|
| 197 |
stats_path = f'data/aggs/stats-{run["run_id"]}.csv'
|
| 198 |
+
if load_stats and os.path.exists(stats_path):
|
| 199 |
+
print(f'Loaded stats file {stats_path!r}')
|
| 200 |
return pd.read_csv(stats_path)
|
| 201 |
|
| 202 |
# Load data and add extra columns from wandb run
|
| 203 |
+
df_long = load_data(run_id=run['run_id'],
|
| 204 |
run_path=run['run_path'],
|
| 205 |
load=load,
|
| 206 |
+
save=save,
|
| 207 |
+
# save = (run['state'] != 'running') & run['end_time']
|
| 208 |
).assign(**run.to_dict())
|
| 209 |
+
assert isinstance(df_long, pd.DataFrame), f'Expected dataframe, but got {type(df_long)}'
|
| 210 |
+
|
|
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|
| 211 |
# Get and save stats
|
| 212 |
+
return calculate_stats(df_long, freq=freq, save_path=stats_path, ntop=ntop)
|
| 213 |
+
|
| 214 |
except Exception as e:
|
| 215 |
+
print(f'Error processing run {run["run_id"]}: { format_exc(e) }')
|
| 216 |
+
|
| 217 |
+
def line_chart(df, col, title=None):
|
| 218 |
+
title = title or col.replace('_',' ').title()
|
| 219 |
+
fig = px.line(df.astype({'_timestamp':str}),
|
| 220 |
+
x='_timestamp', y=col,
|
| 221 |
+
line_group='run_id',
|
| 222 |
+
title=f'{title} over Time',
|
| 223 |
+
labels={'_timestamp':'', col: title, 'uids':'UID','value':'counts', 'variable':'Completions'},
|
| 224 |
+
width=800, height=600,
|
| 225 |
+
template='plotly_white',
|
| 226 |
+
).update_traces(opacity=0.2)
|
| 227 |
+
|
| 228 |
+
fig.write_image(f'data/figures/{col}.png')
|
| 229 |
+
fig.write_html(f'data/figures/{col}.html')
|
| 230 |
+
return col
|
| 231 |
+
|
| 232 |
+
|
| 233 |
+
def parse_arguments():
|
| 234 |
+
parser = argparse.ArgumentParser(description='Process wandb validator runs for a given netuid.')
|
| 235 |
+
parser.add_argument('--load_runs',action='store_true', help='Load runs from file.')
|
| 236 |
+
parser.add_argument('--repull_unfinished',action='store_true', help='Re-pull runs that were running when downloaded and saved.')
|
| 237 |
+
parser.add_argument('--netuid', type=int, default=None, help='Network UID to use.')
|
| 238 |
+
parser.add_argument('--ntop', type=int, default=1000, help='Number of runs to process.')
|
| 239 |
+
parser.add_argument('--min_steps', type=int, default=100, help='Minimum number of steps to include.')
|
| 240 |
+
parser.add_argument('--max_workers', type=int, default=32, help='Max workers to use.')
|
| 241 |
+
parser.add_argument('--no_plot',action='store_true', help='Prevent plotting.')
|
| 242 |
+
parser.add_argument('--no_save',action='store_true', help='Prevent saving data to file.')
|
| 243 |
+
parser.add_argument('--no_load',action='store_true', help='Prevent loading downloaded data from file.')
|
| 244 |
+
parser.add_argument('--no_load_stats',action='store_true', help='Prevent loading stats data from file.')
|
| 245 |
+
parser.add_argument('--freq', type=str, default='H', help='Frequency to aggregate data.')
|
| 246 |
+
parser.add_argument('--completions_ntop', type=int, default=3, help='Number of top completions to include in stats.')
|
| 247 |
+
|
| 248 |
+
return parser.parse_args()
|
| 249 |
+
|
| 250 |
|
| 251 |
if __name__ == '__main__':
|
| 252 |
|
| 253 |
# TODO: flag to overwrite runs that were running when downloaded and saved: check if file date is older than run end time.
|
| 254 |
+
|
| 255 |
+
args = parse_arguments()
|
| 256 |
+
print(args)
|
| 257 |
+
|
| 258 |
filters = None# {"tags": {"$in": [f'1.1.{i}' for i in range(10)]}}
|
| 259 |
# filters={'tags': {'$in': ['5F4tQyWrhfGVcNhoqeiNsR6KjD4wMZ2kfhLj4oHYuyHbZAc3']}} # Is foundation validator
|
| 260 |
+
if args.load_runs and os.path.exists('data/wandb.csv'):
|
| 261 |
+
df_runs = pd.read_csv('data/wandb.csv')
|
| 262 |
+
assert len(df_runs) >= args.ntop, f'Loaded {len(df_runs)} runs, but expected at least {args.ntop}'
|
| 263 |
+
df_runs = df_runs.iloc[:args.ntop]
|
| 264 |
+
else:
|
| 265 |
+
df_runs = pull_wandb_runs(ntop=args.ntop,
|
| 266 |
+
min_steps=args.min_steps,
|
| 267 |
+
netuid=args.netuid,
|
| 268 |
+
filters=filters
|
| 269 |
+
)#summary_filters=lambda s: s.get('augment_prompt'))
|
| 270 |
+
df_runs.to_csv('data/wandb.csv', index=False)
|
| 271 |
+
|
| 272 |
|
| 273 |
os.makedirs('data/runs/', exist_ok=True)
|
| 274 |
os.makedirs('data/aggs/', exist_ok=True)
|
| 275 |
+
os.makedirs('data/figures/', exist_ok=True)
|
|
|
|
|
|
|
|
|
|
| 276 |
|
| 277 |
+
display(df_runs)
|
| 278 |
+
if not args.no_plot:
|
| 279 |
+
plot_gantt(df_runs)
|
| 280 |
+
|
| 281 |
+
with ProcessPoolExecutor(max_workers=min(args.max_workers, df_runs.shape[0])) as executor:
|
| 282 |
+
futures = [executor.submit(
|
| 283 |
+
process,
|
| 284 |
+
run,
|
| 285 |
+
load=not args.no_load,
|
| 286 |
+
save=not args.no_save,
|
| 287 |
+
load_stats=not args.no_load_stats,
|
| 288 |
+
freq=args.freq,
|
| 289 |
+
ntop=args.completions_ntop
|
| 290 |
+
)
|
| 291 |
+
for _, run in df_runs.iterrows()
|
| 292 |
+
]
|
| 293 |
|
| 294 |
# Use tqdm to add a progress bar
|
| 295 |
results = []
|
|
|
|
| 299 |
result = future.result()
|
| 300 |
results.append(result)
|
| 301 |
except Exception as e:
|
| 302 |
+
print(f'generated an exception: {format_exc(e)}')
|
| 303 |
pbar.update(1)
|
| 304 |
|
| 305 |
if not results:
|
| 306 |
raise ValueError('No runs were successfully processed.')
|
| 307 |
|
| 308 |
# Concatenate the results into a single dataframe
|
| 309 |
+
df = pd.concat(results, ignore_index=True).sort_values(['_timestamp','run_id'], ignore_index=True)
|
| 310 |
|
| 311 |
df.to_csv('data/processed.csv', index=False)
|
| 312 |
+
print(f'Saved {df.shape[0]} rows to data/processed.csv')
|
| 313 |
|
| 314 |
display(df)
|
| 315 |
+
if not args.no_plot:
|
| 316 |
+
|
| 317 |
+
plots = []
|
| 318 |
+
|
| 319 |
+
cols = df.set_index(['run_id','_timestamp']).columns
|
| 320 |
+
with ProcessPoolExecutor(max_workers=min(args.max_workers, len(cols))) as executor:
|
| 321 |
+
futures = [executor.submit(line_chart, df, c) for c in cols]
|
| 322 |
+
|
| 323 |
+
# Use tqdm to add a progress bar
|
| 324 |
+
results = []
|
| 325 |
+
with tqdm.tqdm(total=len(futures)) as pbar:
|
| 326 |
+
for future in futures:
|
| 327 |
+
try:
|
| 328 |
+
result = future.result()
|
| 329 |
+
plots.append(result)
|
| 330 |
+
except Exception as e:
|
| 331 |
+
print(f'generated an exception: {format_exc(e)}')
|
| 332 |
+
pbar.update(1)
|
| 333 |
+
|
| 334 |
+
print(f'Saved {len(plots)} plots to data/figures/')
|
| 335 |
+
|
| 336 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 337 |
|