fix path to h99_transcript_annotations.tsv

app.py

@@ -29,7 +29,7 @@ else:
     max_per_gene = "25"
 
 st.markdown("""
-# CryptoCEN Top50 co-expressed partners
+# CryptoCEN Network
 **CryptoCEN** is a co-expression network for *Cryptococcus neoformans* built on 1,524 RNA-seq runs across 34 studies.
 A pair of genes are said to be co-expressed when their expression is correlated across different conditions and
 is often a marker for genes to be involved in similar processes. 
@@ -44,10 +44,10 @@ Put a ``CNAG_#####`` gene_id, one one each row to seed the network
 """)
 
 
-transcript_annotations = datasets.load_dataset(
+h99_transcript_annotations = datasets.load_dataset(
     path = "maomlab/CryptoCEN",
-    data_files = {"transcript_annotations": "transcript_annotations.tsv"})
-transcript_annotations = transcript_annotations["transcript_annotations"].to_pandas()
+    data_files = {"h99_transcript_annotations": "h99_transcript_annotations.tsv"})
+h99_transcript_annotations = h99_transcript_annotations["h99_transcript_annotations"].to_pandas()
 
 top_coexp_hits = datasets.load_dataset(
     path = "maomlab/CryptoCEN",
@@ -122,9 +122,9 @@ descriptions = []
     
 for gene_id in gene_ids:
     try:
-        cnag_id = transcript_annotations.loc[transcript_annotations["cnag_id"] == gene_id]["cnag_id"].values[0]
-        gene_name = transcript_annotations.loc[transcript_annotations["gene_id"] == gene_id]["gene_name"].values[0]
-        description = transcript_annotations.loc[transcript_annotations["gene_id"] == gene_id]["description"].values[0]
+        cnag_id = h99_transcript_annotations.loc[h99_transcript_annotations["cnag_id"] == gene_id]["cnag_id"].values[0]
+        gene_name = h99_transcript_annotations.loc[h99_transcript_annotations["gene_id"] == gene_id]["gene_name"].values[0]
+        description = h99_transcript_annotations.loc[h99_transcript_annotations["gene_id"] == gene_id]["description"].values[0]
     except:
         st.error(f"Unable to locate cnag_id for Gene ID: {gene_id}, it should be of the form 'cnag_######'")
         cnag_id = None