test_enhanced_app.py

#!/usr/bin/env python3
"""
Test script for enhanced Gradio app
"""

import sys
import os

def test_enhanced_app():
    """Test the enhanced Gradio app"""
    print("🧪 Testing Enhanced Gradio App")
    print("=" * 40)
    
    try:
        # Test imports
        print("Testing imports...")
        import pandas as pd
        import numpy as np
        print("✅ Core libraries imported")
        
        # Test model predictor
        print("\nTesting model predictor...")
        from model_predictor import EpitopePredictor
        predictor = EpitopePredictor()
        print(f"✅ Model predictor loaded (model available: {predictor.model is not None})")
        
        # Test app functions
        print("\nTesting app functions...")
        from app_gradio_simple import parse_fasta_text, validate_sequences, format_sequence_with_epitopes
        
        # Test FASTA parsing
        test_fasta = """>Test_Seq
MKLLILTCLVAVALARPKHPIKHQGLPQEVLNENLLRFFVAPFPEVFGKEKVNEL"""
        
        sequences = parse_fasta_text(test_fasta)
        print(f"✅ FASTA parsing: {len(sequences)} sequences parsed")
        
        # Test validation
        errors = validate_sequences(sequences)
        print(f"✅ Sequence validation: {len(errors)} errors found")
        
        # Test sequence formatting
        test_seq = list(sequences.values())[0]
        b_epitopes = [("MKLLILTCLVA", 0.8, "1-11")]
        t_epitopes = [("LARPKHPIKHQ", 0.7, "12-22")]
        formatted = format_sequence_with_epitopes(test_seq, b_epitopes, t_epitopes)
        print(f"✅ Sequence formatting: {len(formatted)} characters")
        
        # Test prediction function
        print("\nTesting prediction function...")
        from app_gradio_simple import predict_epitopes
        
        result = predict_epitopes(test_fasta, None, 0.5)
        print(f"✅ Prediction function: {len(result)} outputs returned")
        
        # Test interface creation
        print("\nTesting interface creation...")
        from app_gradio_simple import create_interface
        demo = create_interface()
        print(f"✅ Interface created: {type(demo)}")
        
        print("\n" + "=" * 40)
        print("🎉 All tests passed! Enhanced app is ready.")
        return True
        
    except ImportError as e:
        print(f"❌ Import error: {e}")
        print("Note: This is expected if Gradio is not installed locally")
        return False
    except Exception as e:
        print(f"❌ Error: {e}")
        return False

if __name__ == '__main__':
    success = test_enhanced_app()
    sys.exit(0 if success else 1)