File size: 9,441 Bytes
69066c5 |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 |
"""
Input validation utilities for NeuroSAM 3 application.
Provides validation functions for user inputs, files, and parameters.
"""
import os
from typing import Optional, Tuple
from pathlib import Path
from logger_config import logger
from config import (
MAX_FILE_SIZE_BYTES,
ALLOWED_IMAGE_EXTENSIONS,
ALLOWED_ANNOTATION_EXTENSIONS,
MIN_THRESHOLD,
MAX_THRESHOLD,
MIN_MASK_THRESHOLD,
MAX_MASK_THRESHOLD,
MAX_COORDINATE_VALUE,
MIN_NUM_MASKS,
MAX_NUM_MASKS,
)
class ValidationError(Exception):
"""Custom exception for validation errors."""
pass
def validate_file_path(file_path: Optional[str]) -> Tuple[bool, Optional[str]]:
"""
Validate that a file path exists and is accessible.
Args:
file_path: Path to validate
Returns:
Tuple of (is_valid, error_message)
"""
if file_path is None:
return False, "File path is None"
if not isinstance(file_path, (str, Path)):
return False, f"Invalid file path type: {type(file_path)}"
file_path = str(file_path)
if not os.path.exists(file_path):
return False, f"File not found: {file_path}"
if not os.path.isfile(file_path):
return False, f"Path is not a file: {file_path}"
return True, None
def validate_file_size(file_path: str) -> Tuple[bool, Optional[str]]:
"""
Validate that a file size is within limits.
Args:
file_path: Path to file to validate
Returns:
Tuple of (is_valid, error_message)
"""
try:
file_size = os.path.getsize(file_path)
if file_size > MAX_FILE_SIZE_BYTES:
size_mb = file_size / (1024 * 1024)
max_mb = MAX_FILE_SIZE_BYTES / (1024 * 1024)
return False, f"File size ({size_mb:.2f} MB) exceeds maximum ({max_mb} MB)"
return True, None
except OSError as e:
return False, f"Could not check file size: {e}"
def validate_file_extension(file_path: str, allowed_extensions: tuple = ALLOWED_IMAGE_EXTENSIONS) -> Tuple[bool, Optional[str]]:
"""
Validate file extension.
Args:
file_path: Path to file
allowed_extensions: Tuple of allowed extensions (default: image extensions)
Returns:
Tuple of (is_valid, error_message)
"""
ext = os.path.splitext(file_path)[1].lower()
if ext not in allowed_extensions:
return False, f"File extension '{ext}' not allowed. Allowed: {', '.join(allowed_extensions)}"
return True, None
def validate_image_file(file_path: Optional[str]) -> Tuple[bool, Optional[str]]:
"""
Comprehensive validation for image files.
Args:
file_path: Path to image file
Returns:
Tuple of (is_valid, error_message)
"""
# Check if path is valid
is_valid, error = validate_file_path(file_path)
if not is_valid:
return False, error
file_path = str(file_path)
# Check extension
is_valid, error = validate_file_extension(file_path, ALLOWED_IMAGE_EXTENSIONS)
if not is_valid:
return False, error
# Check file size
is_valid, error = validate_file_size(file_path)
if not is_valid:
return False, error
return True, None
def validate_threshold(threshold: float) -> Tuple[bool, Optional[str]]:
"""
Validate threshold value.
Args:
threshold: Threshold value to validate
Returns:
Tuple of (is_valid, error_message)
"""
if not isinstance(threshold, (int, float)):
return False, f"Threshold must be a number, got {type(threshold)}"
if threshold < MIN_THRESHOLD or threshold > MAX_THRESHOLD:
return False, f"Threshold must be between {MIN_THRESHOLD} and {MAX_THRESHOLD}, got {threshold}"
return True, None
def validate_mask_threshold(mask_threshold: float) -> Tuple[bool, Optional[str]]:
"""
Validate mask threshold value.
Args:
mask_threshold: Mask threshold value to validate
Returns:
Tuple of (is_valid, error_message)
"""
if not isinstance(mask_threshold, (int, float)):
return False, f"Mask threshold must be a number, got {type(mask_threshold)}"
if mask_threshold < MIN_MASK_THRESHOLD or mask_threshold > MAX_MASK_THRESHOLD:
return False, f"Mask threshold must be between {MIN_MASK_THRESHOLD} and {MAX_MASK_THRESHOLD}, got {mask_threshold}"
return True, None
def validate_coordinates(x: float, y: float, max_value: int = MAX_COORDINATE_VALUE) -> Tuple[bool, Optional[str]]:
"""
Validate coordinate values.
Args:
x: X coordinate
y: Y coordinate
max_value: Maximum allowed coordinate value
Returns:
Tuple of (is_valid, error_message)
"""
if not isinstance(x, (int, float)) or not isinstance(y, (int, float)):
return False, f"Coordinates must be numbers, got x={type(x)}, y={type(y)}"
if x < 0 or y < 0:
return False, f"Coordinates must be non-negative, got x={x}, y={y}"
if x > max_value or y > max_value:
return False, f"Coordinates exceed maximum value ({max_value}), got x={x}, y={y}"
return True, None
def validate_bounding_box(x1: float, y1: float, x2: float, y2: float) -> Tuple[bool, Optional[str]]:
"""
Validate bounding box coordinates.
Args:
x1, y1: Top-left corner coordinates
x2, y2: Bottom-right corner coordinates
Returns:
Tuple of (is_valid, error_message)
"""
# Validate individual coordinates
for coord, name in [(x1, 'x1'), (y1, 'y1'), (x2, 'x2'), (y2, 'y2')]:
if not isinstance(coord, (int, float)):
return False, f"{name} must be a number, got {type(coord)}"
if coord < 0:
return False, f"{name} must be non-negative, got {coord}"
if coord > MAX_COORDINATE_VALUE:
return False, f"{name} exceeds maximum ({MAX_COORDINATE_VALUE}), got {coord}"
# Validate box dimensions
if x2 <= x1:
return False, f"x2 ({x2}) must be greater than x1 ({x1})"
if y2 <= y1:
return False, f"y2 ({y2}) must be greater than y1 ({y1})"
return True, None
def validate_num_masks(num_masks: int) -> Tuple[bool, Optional[str]]:
"""
Validate number of masks parameter.
Args:
num_masks: Number of masks to generate
Returns:
Tuple of (is_valid, error_message)
"""
if not isinstance(num_masks, int):
return False, f"Number of masks must be an integer, got {type(num_masks)}"
if num_masks < MIN_NUM_MASKS or num_masks > MAX_NUM_MASKS:
return False, f"Number of masks must be between {MIN_NUM_MASKS} and {MAX_NUM_MASKS}, got {num_masks}"
return True, None
def validate_prompt_text(prompt_text: Optional[str]) -> Tuple[bool, Optional[str], str]:
"""
Validate and sanitize prompt text.
Args:
prompt_text: Text prompt to validate
Returns:
Tuple of (is_valid, error_message, sanitized_prompt)
"""
if prompt_text is None:
return True, None, "brain" # Default prompt
if not isinstance(prompt_text, str):
return False, f"Prompt must be a string, got {type(prompt_text)}", ""
# Sanitize: strip whitespace
sanitized = prompt_text.strip()
# Check length (reasonable limit)
if len(sanitized) > 500:
return False, "Prompt text is too long (max 500 characters)", ""
# Use default if empty
if not sanitized:
sanitized = "brain"
return True, None, sanitized
def validate_modality(modality: Optional[str]) -> Tuple[bool, Optional[str]]:
"""
Validate imaging modality.
Args:
modality: Modality string (CT or MRI)
Returns:
Tuple of (is_valid, error_message)
"""
if modality is None:
return False, "Modality is required"
if not isinstance(modality, str):
return False, f"Modality must be a string, got {type(modality)}"
modality_upper = modality.upper()
if modality_upper not in ("CT", "MRI"):
return False, f"Modality must be 'CT' or 'MRI', got '{modality}'"
return True, None
def validate_transparency(transparency: float) -> Tuple[bool, Optional[str]]:
"""
Validate transparency value.
Args:
transparency: Transparency value (0.0-1.0)
Returns:
Tuple of (is_valid, error_message)
"""
if not isinstance(transparency, (int, float)):
return False, f"Transparency must be a number, got {type(transparency)}"
if transparency < 0.0 or transparency > 1.0:
return False, f"Transparency must be between 0.0 and 1.0, got {transparency}"
return True, None
def validate_brightness_contrast(value: float, name: str = "value") -> Tuple[bool, Optional[str]]:
"""
Validate brightness or contrast value.
Args:
value: Brightness or contrast value
name: Name of the parameter for error messages
Returns:
Tuple of (is_valid, error_message)
"""
if not isinstance(value, (int, float)):
return False, f"{name} must be a number, got {type(value)}"
if value < 0.0 or value > 3.0:
return False, f"{name} must be between 0.0 and 3.0, got {value}"
return True, None
|