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d1f1097 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 | # Copyright (c) 2022, NVIDIA CORPORATION. All rights reserved.
import json
import os
import sys
import tempfile
import nltk
import pytest
import requests
from megatron.core.datasets.indexed_dataset import IndexedDataset
from megatron.training.tokenizer.gpt2_tokenization import (
PRETRAINED_MERGES_ARCHIVE_MAP,
PRETRAINED_VOCAB_ARCHIVE_MAP,
)
from tools.merge_datasets import main as merge_main
from tools.preprocess_data import Encoder
from tools.preprocess_data import get_args as build_args
from tools.preprocess_data import main as build_main
__HUGGINGFACE_BERT_BASE_UNCASED_VOCAB = (
"https://huggingface.co/bert-base-uncased/raw/main/vocab.txt"
)
__LOCAL_BERT_VOCAB = "/home/gitlab-runner/data/bert_data/vocab.txt"
__LOCAL_GPT2_MERGE = "/home/gitlab-runner/data/gpt3_data/gpt2-merges.txt"
__LOCAL_GPT2_VOCAB = "/home/gitlab-runner/data/gpt3_data/gpt2-vocab.json"
def dummy_jsonl(odir):
# numbers
list_numbers = [json.dumps({"text": str(i + 1)}) + "\n" for i in range(100)]
with open(os.path.join(odir, "numbers.jsonl"), "w") as writer:
writer.writelines(list_numbers)
# numbers ascending
list_numbers_ascending = [
json.dumps({"text": " ".join([str(j + 1) for j in range(i + 1)])}) + "\n"
for i in range(100)
]
with open(os.path.join(odir, "numbers_ascending.jsonl"), "w") as writer:
writer.writelines(list_numbers_ascending)
# test
list_test = []
with open(__file__) as reader:
for line in reader:
list_test.append(json.dumps({"text": line}) + "\n")
with open(os.path.join(odir, "test.jsonl"), "w") as writer:
writer.writelines(list_test)
def build_datasets(idir, odir, extra_args=[]):
for name in os.listdir(idir):
sys.argv = [
sys.argv[0],
"--input",
os.path.join(idir, name),
"--output-prefix",
os.path.join(odir, os.path.splitext(name)[0]),
] + extra_args
build_main()
def merge_datasets(idir):
sys.argv = [sys.argv[0], "--input", idir, "--output-prefix", os.path.join(idir, "merge")]
merge_main()
def do_test_preprocess_data(temp_dir, extra_args=[]):
# set the default nltk data path
os.environ["NLTK_DATA"] = os.path.join(temp_dir, "nltk_data")
nltk.data.path.append(os.environ["NLTK_DATA"])
path_to_raws = os.path.join(temp_dir, "sample_raws")
path_to_data = os.path.join(temp_dir, "sample_data")
os.mkdir(path_to_raws)
os.mkdir(path_to_data)
# create the dummy resources
dummy_jsonl(path_to_raws)
# build the datasets
build_datasets(path_to_raws, path_to_data, extra_args=extra_args)
# merge the datasets
merge_datasets(path_to_data)
sys.argv = [sys.argv[0], "--input", None, "--output-prefix", None] + extra_args
encoder = Encoder(build_args())
encoder.initializer()
def tokens_to_string(toks):
for option in ["decode", "detokenize"]:
try:
return getattr(encoder.tokenizer, option)(toks)
except:
continue
raise RuntimeError(f"{type(encoder.tokenizer)} tokenizer cannot decode or detokenize")
merged_index = 0
merged_dataset = IndexedDataset(os.path.join(path_to_data, "merge"))
# sorted to ensure ordering matches merged dataset
basenames = sorted(
[
name
for name in os.listdir(path_to_data)
if name.endswith(".idx") and not name.startswith("merge")
]
)
# index into the merged document index
merged_doc_index_index = 0
for basename in basenames:
realpath_raw = f"{os.path.join(path_to_raws, '_'.join(basename.split('_')[:-2]))}.jsonl"
realpath_doc = os.path.join(path_to_data, basename.split(".")[-2])
dataset_index = 0
dataset = IndexedDataset(realpath_doc)
merged_doc_idx = merged_dataset.document_indices[
merged_doc_index_index : merged_doc_index_index + len(dataset.document_indices)
]
merged_doc_idx = merged_doc_idx - merged_doc_idx[0]
assert (
dataset.document_indices == merged_doc_idx
).all(), f"ERROR: {basename.split('_')[:-2]}: merged dataset document indices mismatch"
merged_doc_index_index += len(dataset.document_indices) - 1
with open(realpath_raw, "rt") as reader:
for json_line in reader:
toks = encoder.encode(json_line)[0]["text"]
raw = tokens_to_string(toks)
processed_toks = []
while len(processed_toks) < len(toks):
processed_toks.extend(dataset[dataset_index])
dataset_index += 1
processed = tokens_to_string(processed_toks)
assert (
raw == processed
), f"ERROR: {basename.split('_')[:-2]}: raw and processed documents do not match"
merged_toks = []
while len(merged_toks) < len(toks):
merged_toks.extend(merged_dataset[merged_index])
merged_index += 1
merged = tokens_to_string(merged_toks)
assert (
raw == merged
), f"ERROR: {basename.split('_')[:-2]}: raw and merged documents do not match"
print(
f"INFO: {''.join(basename.split('_')[:-2])}: raw, processed, and merged documents match!"
)
print("INFO: Success!")
def gpt2_vocab(odir):
if os.path.exists(__LOCAL_GPT2_VOCAB):
return __LOCAL_GPT2_VOCAB
path = os.path.join(odir, "vocab.json")
with open(path, "wb") as writer:
writer.write(requests.get(PRETRAINED_VOCAB_ARCHIVE_MAP['gpt2']).content)
return path
def gpt2_merge(odir):
if os.path.exists(__LOCAL_GPT2_MERGE):
return __LOCAL_GPT2_MERGE
path = os.path.join(odir, "merge.txt")
with open(path, "wb") as writer:
writer.write(requests.get(PRETRAINED_MERGES_ARCHIVE_MAP['gpt2']).content)
return path
def test_preprocess_data_gpt():
with tempfile.TemporaryDirectory() as temp_dir:
# gpt specific args
gpt_args = [
"--tokenizer-type",
"GPT2BPETokenizer",
"--vocab-file",
"/opt/data/tokenizers/megatron/gpt2-vocab.json",
"--merge-file",
"/opt/data/tokenizers/megatron/gpt2-merges.txt",
"--append-eod",
"--workers",
"10",
"--log-interval",
"1",
]
do_test_preprocess_data(temp_dir, extra_args=gpt_args)
def bert_vocab(odir):
if os.path.exists(__LOCAL_BERT_VOCAB):
return __LOCAL_BERT_VOCAB
path = os.path.join(odir, "vocab.txt")
with open(path, "wb") as writer:
writer.write(requests.get(__HUGGINGFACE_BERT_BASE_UNCASED_VOCAB).content)
return path
@pytest.mark.flaky
@pytest.mark.flaky_in_dev
def test_preprocess_data_bert():
with tempfile.TemporaryDirectory() as temp_dir:
# bert specific args
bert_args = [
"--tokenizer-type",
"BertWordPieceLowerCase",
"--vocab-file",
"/opt/data/tokenizers/megatron/gpt2-vocab.json",
"--split-sentences",
"--workers",
"10",
"--log-interval",
"1",
"--partitions",
"2",
"--keep-sequential-samples",
]
do_test_preprocess_data(temp_dir, extra_args=bert_args)
if __name__ == "__main__":
test_preprocess_data_gpt()
test_preprocess_data_bert()
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