""" App-level utility functions for PopulationHealthScreener. Import these at the top of the notebook before building any widgets. """ def silence_libraries(): """ Suppress verbose output from ML libraries before model loading. Call once at startup. Sets TRANSFORMERS_VERBOSITY=error, TQDM_DISABLE=1, and raises the log level for transformers and torch to ERROR so they stay quiet during inference. """ import warnings, os, logging warnings.filterwarnings("ignore") os.environ['TRANSFORMERS_VERBOSITY'] = 'error' os.environ['TQDM_DISABLE'] = '1' logging.getLogger("transformers").setLevel(logging.ERROR) logging.getLogger("torch").setLevel(logging.ERROR) def exec_script(path, inputs): """ Run a script from disk inside a fresh namespace. Pass inputs as a dict — the script reads them via globals().get(). The script's local variables stay in the returned namespace; nothing bleeds into the caller's scope. ns = exec_script('src/search_pubmed.py', {'query_selector': qs, ...}) table = ns['articles_table'] """ import os ns = dict(inputs) with open(os.path.abspath(os.path.join(os.getcwd(), path))) as f: exec(f.read(), ns) return ns