omm7 commited on
Commit
ccffd7d
·
verified ·
1 Parent(s): 14f59b9

Upload folder using huggingface_hub

Browse files
Files changed (3) hide show
  1. Dockerfile +6 -6
  2. app.py +31 -29
  3. requirements.txt +0 -1
Dockerfile CHANGED
@@ -1,3 +1,4 @@
 
1
  FROM python:3.9
2
 
3
  # Set the working directory inside the container to /app
@@ -7,14 +8,12 @@ WORKDIR /app
7
  COPY requirements.txt .
8
 
9
  # Install Python dependencies listed in requirements.txt
10
- # Using --no-cache-dir to save space
11
  RUN pip install --no-cache-dir -r requirements.txt
12
 
13
- # --- CRITICAL FIX: Explicitly set Keras backend (optional but highly recommended) ---
14
- # This forces Keras to use the installed TensorFlow library.
15
  ENV KERAS_BACKEND=tensorflow
16
 
17
- # Copy application files and the model file
18
  COPY app.py .
19
  COPY tuned_ai_model_best_lat.keras .
20
 
@@ -26,5 +25,6 @@ ENV HOME=/home/user \
26
  WORKDIR $HOME/app
27
  COPY --chown=user . $HOME/app
28
 
29
- # Define the command to run the Streamlit app
30
- CMD ["streamlit", "run", "app.py", "--server.port=7860", "--server.address=0.0.0.0"]
 
 
1
+ # Use a minimal base image with Python 3.9 installed
2
  FROM python:3.9
3
 
4
  # Set the working directory inside the container to /app
 
8
  COPY requirements.txt .
9
 
10
  # Install Python dependencies listed in requirements.txt
 
11
  RUN pip install --no-cache-dir -r requirements.txt
12
 
13
+ # --- CRITICAL FIX: Explicitly set Keras backend ---
 
14
  ENV KERAS_BACKEND=tensorflow
15
 
16
+ # Copy application files and the model file (must be named tuned_ai_model_best_lat.keras)
17
  COPY app.py .
18
  COPY tuned_ai_model_best_lat.keras .
19
 
 
25
  WORKDIR $HOME/app
26
  COPY --chown=user . $HOME/app
27
 
28
+ # Define the command to run the Streamlit app, re-including the CRITICAL security flag
29
+ # This flag should prevent the 403 Forbidden error caused by XSRF protection in proxy environments.
30
+ CMD ["streamlit", "run", "app.py", "--server.port=7860", "--server.address=0.0.0.0", "--server.enableXsrfProtection=false"]
app.py CHANGED
@@ -5,26 +5,25 @@ import tensorflow as tf
5
  from tensorflow.keras.models import load_model
6
  import os
7
  import time
8
- import requests
9
  from io import BytesIO
10
- import cv2 # Import cv2 for image resizing
11
 
12
  # Define the correct class names for output
13
  CLASS_NAMES = {0: 'Normal', 1: 'Viral Pneumonia', 2: 'Covid'}
14
- IMG_SIZE = 224 # Set this constant correctly
15
 
16
  # Function to load the model (cached for efficiency)
17
  @st.cache_resource
18
  def load_tuned_model():
19
- # Attempt loading the model
20
- # Use the correct path to the saved model
21
  return tf.keras.models.load_model(
22
  "tuned_ai_model_best_lat.keras",
23
- # custom_objects are not needed for this model
24
  )
25
 
26
  # Function to run the prediction and show progress
27
  def run_prediction(image_file, model, img_size):
 
28
  progress_bar = st.progress(0)
29
  status_text = st.empty()
30
  for i in range(100):
@@ -33,34 +32,46 @@ def run_prediction(image_file, model, img_size):
33
  time.sleep(0.01)
34
 
35
  try:
36
- # Read the image file
37
  image = Image.open(image_file).convert("RGB")
38
-
39
- # Correct image resizing to match model's trained input shape (224x224)
40
  img_array = np.array(image.resize((img_size, img_size)))
41
-
42
- # Expand dimensions to create a batch of size 1
43
  img_array = np.expand_dims(img_array, axis=0)
44
-
45
- # Normalize the image data
46
  img_array = img_array / 255.0
47
 
48
  # Make the prediction
49
  prediction = model.predict(img_array).flatten()
50
 
51
- # Correctly find the index of the class with the highest probability (0, 1, or 2)
52
  class_predicted_idx = np.argmax(prediction)
53
  predicted_class_name = CLASS_NAMES[class_predicted_idx]
54
 
55
  status_text.success("Prediction complete!")
56
- return predicted_class_name, prediction
57
-
 
 
 
 
 
 
 
 
 
 
 
 
 
58
  except Exception as e:
59
  status_text.error(f"An error occurred during prediction: {e}")
60
- return None, None
61
 
62
- # Load the model
63
- model = load_tuned_model()
 
 
 
 
 
64
 
65
  st.title("COVID Detection from Chest X-ray")
66
  st.write("Upload a chest X-ray image to predict if it shows signs of Normal, Viral Pneumonia, or COVID.")
@@ -68,17 +79,8 @@ st.write("Upload a chest X-ray image to predict if it shows signs of Normal, Vir
68
  uploaded_file = st.file_uploader("Choose an X-ray image...", type=["jpg", "jpeg", "png"])
69
 
70
  if uploaded_file is not None:
71
- # Display the uploaded image
72
  image = Image.open(uploaded_file)
73
  st.image(image, caption="Uploaded X-ray Image", use_container_width=True)
74
 
75
- # Make prediction when button is clicked
76
  if st.button("Predict"):
77
- predicted_class, prediction_probabilities = run_prediction(uploaded_file, model, IMG_SIZE)
78
-
79
- if predicted_class:
80
- st.write(f"Prediction: **{predicted_class}**")
81
- st.write("Prediction Probabilities:")
82
- # Display probabilities for all classes
83
- for i, prob in enumerate(prediction_probabilities):
84
- st.write(f"- {CLASS_NAMES[i]}: {prob:.4f}")
 
5
  from tensorflow.keras.models import load_model
6
  import os
7
  import time
 
8
  from io import BytesIO
 
9
 
10
  # Define the correct class names for output
11
  CLASS_NAMES = {0: 'Normal', 1: 'Viral Pneumonia', 2: 'Covid'}
12
+ IMG_SIZE = 224
13
 
14
  # Function to load the model (cached for efficiency)
15
  @st.cache_resource
16
  def load_tuned_model():
17
+ # Use custom_objects for maximum robustness when loading models with
18
+ # pre-trained components like VGG16 in specific environments.
19
  return tf.keras.models.load_model(
20
  "tuned_ai_model_best_lat.keras",
21
+ custom_objects={'VGG16': tf.keras.applications.VGG16}
22
  )
23
 
24
  # Function to run the prediction and show progress
25
  def run_prediction(image_file, model, img_size):
26
+ # Progress visualization (for user experience)
27
  progress_bar = st.progress(0)
28
  status_text = st.empty()
29
  for i in range(100):
 
32
  time.sleep(0.01)
33
 
34
  try:
35
+ # Read and process the image using PIL (Image)
36
  image = Image.open(image_file).convert("RGB")
 
 
37
  img_array = np.array(image.resize((img_size, img_size)))
 
 
38
  img_array = np.expand_dims(img_array, axis=0)
 
 
39
  img_array = img_array / 255.0
40
 
41
  # Make the prediction
42
  prediction = model.predict(img_array).flatten()
43
 
44
+ # Find the predicted class index and name
45
  class_predicted_idx = np.argmax(prediction)
46
  predicted_class_name = CLASS_NAMES[class_predicted_idx]
47
 
48
  status_text.success("Prediction complete!")
49
+
50
+ # Display results
51
+ st.subheader("Prediction Probabilities:")
52
+ for i, prob in enumerate(prediction):
53
+ class_name = CLASS_NAMES[i]
54
+ if i == class_predicted_idx:
55
+ st.markdown(f"**{class_name}: {prob*100:.2f}%** (Predicted)", unsafe_allow_html=True)
56
+ else:
57
+ st.markdown(f"{class_name}: {prob*100:.2f}%")
58
+
59
+ if class_predicted_idx == 2:
60
+ st.error(f"**Result: ❗ HIGH LIKELIHOOD OF COVID DETECTED ❗**")
61
+ else:
62
+ st.success(f"**Result: ✅ {predicted_class_name} Detected**")
63
+
64
  except Exception as e:
65
  status_text.error(f"An error occurred during prediction: {e}")
66
+ st.exception(e) # Show full traceback for debugging
67
 
68
+ # Load the model and ensure the app stops if loading fails
69
+ try:
70
+ model = load_tuned_model()
71
+ except Exception as e:
72
+ st.error("Model Loading Failed. Check TF/Keras versions and model file name (tuned_ai_model_best_lat.keras).")
73
+ st.exception(e)
74
+ st.stop()
75
 
76
  st.title("COVID Detection from Chest X-ray")
77
  st.write("Upload a chest X-ray image to predict if it shows signs of Normal, Viral Pneumonia, or COVID.")
 
79
  uploaded_file = st.file_uploader("Choose an X-ray image...", type=["jpg", "jpeg", "png"])
80
 
81
  if uploaded_file is not None:
 
82
  image = Image.open(uploaded_file)
83
  st.image(image, caption="Uploaded X-ray Image", use_container_width=True)
84
 
 
85
  if st.button("Predict"):
86
+ run_prediction(uploaded_file, model, IMG_SIZE)
 
 
 
 
 
 
 
requirements.txt CHANGED
@@ -4,4 +4,3 @@ numpy==2.0.2
4
  pandas==2.2.2
5
  keras==3.10.0
6
  Pillow==11.3.0
7
- opencv-python==4.12.0.88
 
4
  pandas==2.2.2
5
  keras==3.10.0
6
  Pillow==11.3.0