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| import math | |
| import torch | |
| import torch.nn as nn | |
| import torch.nn.functional as F | |
| class PositionalEncoding(nn.Module): | |
| def __init__(self, d_model: int, dropout: float = 0.1, max_len: int = 5000): | |
| super().__init__() | |
| self.dropout = nn.Dropout(p=dropout) | |
| position = torch.arange(max_len).unsqueeze(1) | |
| div_term = torch.exp(torch.arange(0, d_model, 2) * (-math.log(10000.0) / d_model)) | |
| pe = torch.zeros(1, max_len, d_model) # batch_first | |
| pe[0, :, 0::2] = torch.sin(position * div_term) | |
| pe[0, :, 1::2] = torch.cos(position * div_term) | |
| self.register_buffer('pe', pe) | |
| def forward(self, x: torch.Tensor) -> torch.Tensor: | |
| """ | |
| Arguments: | |
| x: Tensor, shape ``[batch_size x max_seq_length x embedding_dim]`` | |
| """ | |
| x = x + self.pe[:, :x.size(1), :] | |
| return self.dropout(x) | |
| class SelfMHADecoder(nn.Module): | |
| def __init__(self, emb_dim: int, num_heads: int, num_mha_layers: int, num_classes: int, dropout: float, pos_encoder: str = None, max_len: int = 100): | |
| super().__init__() | |
| self.num_mha_layers = num_mha_layers | |
| # positional encoding | |
| self.pos_encoder_type = pos_encoder | |
| if pos_encoder == "sincos": | |
| self.pos_encoder = PositionalEncoding(d_model=emb_dim, dropout=dropout, max_len=max_len) | |
| # MHA blocks | |
| mha_layer = nn.TransformerEncoderLayer(d_model=emb_dim, | |
| nhead=num_heads, | |
| dim_feedforward=emb_dim, | |
| dropout=dropout, | |
| batch_first=True) | |
| self.mha = nn.TransformerEncoder(mha_layer, num_layers=num_mha_layers) | |
| # linear projection for adjusting out_dim to num_classes | |
| self.out_linear = nn.Linear(emb_dim, num_classes, bias=True) | |
| # Initializing weights | |
| self.reset_parameters() | |
| def reset_parameters(self): | |
| for param in self.parameters(): | |
| stdv = 1. / math.sqrt(param.size(-1)) | |
| param.data.uniform_(-stdv, stdv) | |
| def forward(self, edge_emb): | |
| """ | |
| Paramters | |
| --------- | |
| graph_emb: torch.tensor [batch_size x max_seq_length x emb_dim] | |
| Returns | |
| ------- | |
| probs: torch.tensor [batch_size x max_seq_length x num_classes] | |
| probabilities of classes | |
| """ | |
| #--------------- | |
| # MHA decoding | |
| #--------------- | |
| if self.pos_encoder_type == "sincos": | |
| edge_emb = self.pos_encoder(edge_emb) | |
| h = self.mha(edge_emb, is_causal=True) # [batch_size x max_seq_length x emb_dim] | |
| logits = self.out_linear(h) | |
| probs = F.log_softmax(logits, dim=-1) | |
| return probs |