| (function(Clazz
|
| ,Clazz_getClassName
|
| ,Clazz_newLongArray
|
| ,Clazz_doubleToByte
|
| ,Clazz_doubleToInt
|
| ,Clazz_doubleToLong
|
| ,Clazz_declarePackage
|
| ,Clazz_instanceOf
|
| ,Clazz_load
|
| ,Clazz_instantialize
|
| ,Clazz_decorateAsClass
|
| ,Clazz_floatToInt
|
| ,Clazz_floatToLong
|
| ,Clazz_makeConstructor
|
| ,Clazz_defineEnumConstant
|
| ,Clazz_exceptionOf
|
| ,Clazz_newIntArray
|
| ,Clazz_defineStatics
|
| ,Clazz_newFloatArray
|
| ,Clazz_declareType
|
| ,Clazz_prepareFields
|
| ,Clazz_superConstructor
|
| ,Clazz_newByteArray
|
| ,Clazz_declareInterface
|
| ,Clazz_p0p
|
| ,Clazz_pu$h
|
| ,Clazz_newShortArray
|
| ,Clazz_innerTypeInstance
|
| ,Clazz_isClassDefined
|
| ,Clazz_prepareCallback
|
| ,Clazz_newArray
|
| ,Clazz_castNullAs
|
| ,Clazz_floatToShort
|
| ,Clazz_superCall
|
| ,Clazz_decorateAsType
|
| ,Clazz_newBooleanArray
|
| ,Clazz_newCharArray
|
| ,Clazz_implementOf
|
| ,Clazz_newDoubleArray
|
| ,Clazz_overrideConstructor
|
| ,Clazz_clone
|
| ,Clazz_doubleToShort
|
| ,Clazz_getInheritedLevel
|
| ,Clazz_getParamsType
|
| ,Clazz_isAF
|
| ,Clazz_isAB
|
| ,Clazz_isAI
|
| ,Clazz_isAS
|
| ,Clazz_isASS
|
| ,Clazz_isAP
|
| ,Clazz_isAFloat
|
| ,Clazz_isAII
|
| ,Clazz_isAFF
|
| ,Clazz_isAFFF
|
| ,Clazz_tryToSearchAndExecute
|
| ,Clazz_getStackTrace
|
| ,Clazz_inheritArgs
|
| ,Clazz_alert
|
| ,Clazz_defineMethod
|
| ,Clazz_overrideMethod
|
| ,Clazz_declareAnonymous
|
|
|
| ,Clazz_cloneFinals
|
| ){
|
| var $t$;
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| |
| |
| |
|
|
|
|
| (function(jQuery) {
|
|
|
| if (!jQuery.ui)
|
| try{
|
| (function(e,t){function i(t,n){var r,i,o,u=t.nodeName.toLowerCase();return"area"===u?(r=t.parentNode,i=r.name,!t.href||!i||r.nodeName.toLowerCase()!=="map"?!1:(o=e("img[usemap=#"+i+"]")[0],!!o&&s(o))):(/input|select|textarea|button|object/.test(u)?!t.disabled:"a"===u?t.href||n:n)&&s(t)}function s(t){return e.expr.filters.visible(t)&&!e(t).parents().andSelf().filter(function(){return e.css(this,"visibility")==="hidden"}).length}var n=0,r=/^ui-id-\d+$/;e.ui=e.ui||{};if(e.ui.version)return;e.extend(e.ui,{version:"1.9.2",keyCode:{BACKSPACE:8,COMMA:188,DELETE:46,DOWN:40,END:35,ENTER:13,ESCAPE:27,HOME:36,LEFT:37,NUMPAD_ADD:107,NUMPAD_DECIMAL:110,NUMPAD_DIVIDE:111,NUMPAD_ENTER:108,NUMPAD_MULTIPLY:106,NUMPAD_SUBTRACT:109,PAGE_DOWN:34,PAGE_UP:33,PERIOD:190,RIGHT:39,SPACE:32,TAB:9,UP:38}}),e.fn.extend({_focus:e.fn.focus,focus:function(t,n){return typeof t=="number"?this.each(function(){var r=this;setTimeout(function(){e(r).focus(),n&&n.call(r)},t)}):this._focus.apply(this,arguments)},scrollParent:function(){var t;return e.ui.ie&&/(static|relative)/.test(this.css("position"))||/absolute/.test(this.css("position"))?t=this.parents().filter(function(){return/(relative|absolute|fixed)/.test(e.css(this,"position"))&&/(auto|scroll)/.test(e.css(this,"overflow")+e.css(this,"overflow-y")+e.css(this,"overflow-x"))}).eq(0):t=this.parents().filter(function(){return/(auto|scroll)/.test(e.css(this,"overflow")+e.css(this,"overflow-y")+e.css(this,"overflow-x"))}).eq(0),/fixed/.test(this.css("position"))||!t.length?e(document):t},zIndex:function(n){if(n!==t)return this.css("zIndex",n);if(this.length){var r=e(this[0]),i,s;while(r.length&&r[0]!==document){i=r.css("position");if(i==="absolute"||i==="relative"||i==="fixed"){s=parseInt(r.css("zIndex"),10);if(!isNaN(s)&&s!==0)return s}r=r.parent()}}return 0},uniqueId:function(){return this.each(function(){this.id||(this.id="ui-id-"+ ++n)})},removeUniqueId:function(){return this.each(function(){r.test(this.id)&&e(this).removeAttr("id")})}}),e.extend(e.expr[":"],{data:e.expr.createPseudo?e.expr.createPseudo(function(t){return function(n){return!!e.data(n,t)}}):function(t,n,r){return!!e.data(t,r[3])},focusable:function(t){return i(t,!isNaN(e.attr(t,"tabindex")))},tabbable:function(t){var n=e.attr(t,"tabindex"),r=isNaN(n);return(r||n>=0)&&i(t,!r)}}),e(function(){var t=document.body,n=t.appendChild(n=document.createElement("div"));n.offsetHeight,e.extend(n.style,{minHeight:"100px",height:"auto",padding:0,borderWidth:0}),e.support.minHeight=n.offsetHeight===100,e.support.selectstart="onselectstart"in n,t.removeChild(n).style.display="none"}),e("<a>").outerWidth(1).jquery||e.each(["Width","Height"],function(n,r){function u(t,n,r,s){return e.each(i,function(){n-=parseFloat(e.css(t,"padding"+this))||0,r&&(n-=parseFloat(e.css(t,"border"+this+"Width"))||0),s&&(n-=parseFloat(e.css(t,"margin"+this))||0)}),n}var i=r==="Width"?["Left","Right"]:["Top","Bottom"],s=r.toLowerCase(),o={innerWidth:e.fn.innerWidth,innerHeight:e.fn.innerHeight,outerWidth:e.fn.outerWidth,outerHeight:e.fn.outerHeight};e.fn["inner"+r]=function(n){return n===t?o["inner"+r].call(this):this.each(function(){e(this).css(s,u(this,n)+"px")})},e.fn["outer"+r]=function(t,n){return typeof t!="number"?o["outer"+r].call(this,t):this.each(function(){e(this).css(s,u(this,t,!0,n)+"px")})}}),e("<a>").data("a-b","a").removeData("a-b").data("a-b")&&(e.fn.removeData=function(t){return function(n){return arguments.length?t.call(this,e.camelCase(n)):t.call(this)}}(e.fn.removeData)),function(){var t=/msie ([\w.]+)/.exec(navigator.userAgent.toLowerCase())||[];e.ui.ie=t.length?!0:!1,e.ui.ie6=parseFloat(t[1],10)===6}(),e.fn.extend({disableSelection:function(){return this.bind((e.support.selectstart?"selectstart":"mousedown")+".ui-disableSelection",function(e){e.preventDefault()})},enableSelection:function(){return this.unbind(".ui-disableSelection")}}),e.extend(e.ui,{plugin:{add:function(t,n,r){var i,s=e.ui[t].prototype;for(i in r)s.plugins[i]=s.plugins[i]||[],s.plugins[i].push([n,r[i]])},call:function(e,t,n){var r,i=e.plugins[t];if(!i||!e.element[0].parentNode||e.element[0].parentNode.nodeType===11)return;for(r=0;r<i.length;r++)e.options[i[r][0]]&&i[r][1].apply(e.element,n)}},contains:e.contains,hasScroll:function(t,n){if(e(t).css("overflow")==="hidden")return!1;var r=n&&n==="left"?"scrollLeft":"scrollTop",i=!1;return t[r]>0?!0:(t[r]=1,i=t[r]>0,t[r]=0,i)},isOverAxis:function(e,t,n){return e>t&&e<t+n},isOver:function(t,n,r,i,s,o){return e.ui.isOverAxis(t,r,s)&&e.ui.isOverAxis(n,i,o)}})
|
| })(jQuery);
|
| }catch (e) {
|
| System.out.println("coremenu failed to load jQuery.ui.core -- jQuery version conflict?");
|
| }
|
| if (!jQuery.ui.widget)
|
| try{
|
| (function(e,t){var n=0,r=Array.prototype.slice,i=e.cleanData;e.cleanData=function(t){for(var n=0,r;(r=t[n])!=null;n++)try{e(r).triggerHandler("remove")}catch(s){}i(t)},e.widget=function(t,n,r){var i,s,o,u,a=t.split(".")[0];t=t.split(".")[1],i=a+"-"+t,r||(r=n,n=e.Widget),e.expr[":"][i.toLowerCase()]=function(t){return!!e.data(t,i)},e[a]=e[a]||{},s=e[a][t],o=e[a][t]=function(e,t){if(!this._createWidget)return new o(e,t);arguments.length&&this._createWidget(e,t)},e.extend(o,s,{version:r.version,_proto:e.extend({},r),_childConstructors:[]}),u=new n,u.options=e.widget.extend({},u.options),e.each(r,function(t,i){e.isFunction(i)&&(r[t]=function(){var e=function(){return n.prototype[t].apply(this,arguments)},r=function(e){return n.prototype[t].apply(this,e)};return function(){var t=this._super,n=this._superApply,s;return this._super=e,this._superApply=r,s=i.apply(this,arguments),this._super=t,this._superApply=n,s}}())}),o.prototype=e.widget.extend(u,{widgetEventPrefix:s?u.widgetEventPrefix:t},r,{constructor:o,namespace:a,widgetName:t,widgetBaseClass:i,widgetFullName:i}),s?(e.each(s._childConstructors,function(t,n){var r=n.prototype;e.widget(r.namespace+"."+r.widgetName,o,n._proto)}),delete s._childConstructors):n._childConstructors.push(o),e.widget.bridge(t,o)},e.widget.extend=function(n){var i=r.call(arguments,1),s=0,o=i.length,u,a;for(;s<o;s++)for(u in i[s])a=i[s][u],i[s].hasOwnProperty(u)&&a!==t&&(e.isPlainObject(a)?n[u]=e.isPlainObject(n[u])?e.widget.extend({},n[u],a):e.widget.extend({},a):n[u]=a);return n},e.widget.bridge=function(n,i){var s=i.prototype.widgetFullName||n;e.fn[n]=function(o){var u=typeof o=="string",a=r.call(arguments,1),f=this;return o=!u&&a.length?e.widget.extend.apply(null,[o].concat(a)):o,u?this.each(function(){var r,i=e.data(this,s);if(!i)return e.error("cannot call methods on "+n+" prior to initialization; "+"attempted to call method '"+o+"'");if(!e.isFunction(i[o])||o.charAt(0)==="_")return e.error("no such method '"+o+"' for "+n+" widget instance");r=i[o].apply(i,a);if(r!==i&&r!==t)return f=r&&r.jquery?f.pushStack(r.get()):r,!1}):this.each(function(){var t=e.data(this,s);t?t.option(o||{})._init():e.data(this,s,new i(o,this))}),f}},e.Widget=function(){},e.Widget._childConstructors=[],e.Widget.prototype={widgetName:"widget",widgetEventPrefix:"",defaultElement:"<div>",options:{disabled:!1,create:null},_createWidget:function(t,r){r=e(r||this.defaultElement||this)[0],this.element=e(r),this.uuid=n++,this.eventNamespace="."+this.widgetName+this.uuid,this.options=e.widget.extend({},this.options,this._getCreateOptions(),t),this.bindings=e(),this.hoverable=e(),this.focusable=e(),r!==this&&(e.data(r,this.widgetName,this),e.data(r,this.widgetFullName,this),this._on(!0,this.element,{remove:function(e){e.target===r&&this.destroy()}}),this.document=e(r.style?r.ownerDocument:r.document||r),this.window=e(this.document[0].defaultView||this.document[0].parentWindow)),this._create(),this._trigger("create",null,this._getCreateEventData()),this._init()},_getCreateOptions:e.noop,_getCreateEventData:e.noop,_create:e.noop,_init:e.noop,destroy:function(){this._destroy(),this.element.unbind(this.eventNamespace).removeData(this.widgetName).removeData(this.widgetFullName).removeData(e.camelCase(this.widgetFullName)),this.widget().unbind(this.eventNamespace).removeAttr("aria-disabled").removeClass(this.widgetFullName+"-disabled "+"ui-state-disabled"),this.bindings.unbind(this.eventNamespace),this.hoverable.removeClass("ui-state-hover"),this.focusable.removeClass("ui-state-focus")},_destroy:e.noop,widget:function(){return this.element},option:function(n,r){var i=n,s,o,u;if(arguments.length===0)return e.widget.extend({},this.options);if(typeof n=="string"){i={},s=n.split("."),n=s.shift();if(s.length){o=i[n]=e.widget.extend({},this.options[n]);for(u=0;u<s.length-1;u++)o[s[u]]=o[s[u]]||{},o=o[s[u]];n=s.pop();if(r===t)return o[n]===t?null:o[n];o[n]=r}else{if(r===t)return this.options[n]===t?null:this.options[n];i[n]=r}}return this._setOptions(i),this},_setOptions:function(e){var t;for(t in e)this._setOption(t,e[t]);return this},_setOption:function(e,t){return this.options[e]=t,e==="disabled"&&(this.widget().toggleClass(this.widgetFullName+"-disabled ui-state-disabled",!!t).attr("aria-disabled",t),this.hoverable.removeClass("ui-state-hover"),this.focusable.removeClass("ui-state-focus")),this},enable:function(){return this._setOption("disabled",!1)},disable:function(){return this._setOption("disabled",!0)},_on:function(t,n,r){var i,s=this;typeof t!="boolean"&&(r=n,n=t,t=!1),r?(n=i=e(n),this.bindings=this.bindings.add(n)):(r=n,n=this.element,i=this.widget()),e.each(r,function(r,o){function u(){if(!t&&(s.options.disabled===!0||e(this).hasClass("ui-state-disabled")))return;return(typeof o=="string"?s[o]:o).apply(s,arguments)}typeof o!="string"&&(u.guid=o.guid=o.guid||u.guid||e.guid++);var a=r.match(/^(\w+)\s*(.*)$/),f=a[1]+s.eventNamespace,l=a[2];l?i.delegate(l,f,u):n.bind(f,u)})},_off:function(e,t){t=(t||"").split(" ").join(this.eventNamespace+" ")+this.eventNamespace,e.unbind(t).undelegate(t)},_delay:function(e,t){function n(){return(typeof e=="string"?r[e]:e).apply(r,arguments)}var r=this;return setTimeout(n,t||0)},_hoverable:function(t){this.hoverable=this.hoverable.add(t),this._on(t,{mouseenter:function(t){e(t.currentTarget).addClass("ui-state-hover")},mouseleave:function(t){e(t.currentTarget).removeClass("ui-state-hover")}})},_focusable:function(t){this.focusable=this.focusable.add(t),this._on(t,{focusin:function(t){e(t.currentTarget).addClass("ui-state-focus")},focusout:function(t){e(t.currentTarget).removeClass("ui-state-focus")}})},_trigger:function(t,n,r){var i,s,o=this.options[t];r=r||{},n=e.Event(n),n.type=(t===this.widgetEventPrefix?t:this.widgetEventPrefix+t).toLowerCase(),n.target=this.element[0],s=n.originalEvent;if(s)for(i in s)i in n||(n[i]=s[i]);return this.element.trigger(n,r),!(e.isFunction(o)&&o.apply(this.element[0],[n].concat(r))===!1||n.isDefaultPrevented())}},e.each({show:"fadeIn",hide:"fadeOut"},function(t,n){e.Widget.prototype["_"+t]=function(r,i,s){typeof i=="string"&&(i={effect:i});var o,u=i?i===!0||typeof i=="number"?n:i.effect||n:t;i=i||{},typeof i=="number"&&(i={duration:i}),o=!e.isEmptyObject(i),i.complete=s,i.delay&&r.delay(i.delay),o&&e.effects&&(e.effects.effect[u]||e.uiBackCompat!==!1&&e.effects[u])?r[t](i):u!==t&&r[u]?r[u](i.duration,i.easing,s):r.queue(function(n){e(this)[t](),s&&s.call(r[0]),n()})}}),e.uiBackCompat!==!1&&(e.Widget.prototype._getCreateOptions=function(){return e.metadata&&e.metadata.get(this.element[0])[this.widgetName]})
|
| })(jQuery);
|
| }catch (e) {
|
| System.out.println("coremenu failed to load jQuery.ui.widget -- jQuery version conflict?");
|
| }
|
| if (!jQuery.ui.mouse)
|
| try{
|
| (function(e,t){var n=!1;e(document).mouseup(function(e){n=!1}),e.widget("ui.mouse",{version:"1.9.2",options:{cancel:"input,textarea,button,select,option",distance:1,delay:0},_mouseInit:function(){var t=this;this.element.bind("mousedown."+this.widgetName,function(e){return t._mouseDown(e)}).bind("click."+this.widgetName,function(n){if(!0===e.data(n.target,t.widgetName+".preventClickEvent"))return e.removeData(n.target,t.widgetName+".preventClickEvent"),n.stopImmediatePropagation(),!1}),this.started=!1},_mouseDestroy:function(){this.element.unbind("."+this.widgetName),this._mouseMoveDelegate&&e(document).unbind("mousemove."+this.widgetName,this._mouseMoveDelegate).unbind("mouseup."+this.widgetName,this._mouseUpDelegate)},_mouseDown:function(t){if(n)return;this._mouseStarted&&this._mouseUp(t),this._mouseDownEvent=t;var r=this,i=t.which===1,s=typeof this.options.cancel=="string"&&t.target.nodeName?e(t.target).closest(this.options.cancel).length:!1;if(!i||s||!this._mouseCapture(t))return!0;this.mouseDelayMet=!this.options.delay,this.mouseDelayMet||(this._mouseDelayTimer=setTimeout(function(){r.mouseDelayMet=!0},this.options.delay));if(this._mouseDistanceMet(t)&&this._mouseDelayMet(t)){this._mouseStarted=this._mouseStart(t)!==!1;if(!this._mouseStarted)return t.preventDefault(),!0}return!0===e.data(t.target,this.widgetName+".preventClickEvent")&&e.removeData(t.target,this.widgetName+".preventClickEvent"),this._mouseMoveDelegate=function(e){return r._mouseMove(e)},this._mouseUpDelegate=function(e){return r._mouseUp(e)},e(document).bind("mousemove."+this.widgetName,this._mouseMoveDelegate).bind("mouseup."+this.widgetName,this._mouseUpDelegate),t.preventDefault(),n=!0,!0},_mouseMove:function(t){return!e.ui.ie||document.documentMode>=9||!!t.button?this._mouseStarted?(this._mouseDrag(t),t.preventDefault()):(this._mouseDistanceMet(t)&&this._mouseDelayMet(t)&&(this._mouseStarted=this._mouseStart(this._mouseDownEvent,t)!==!1,this._mouseStarted?this._mouseDrag(t):this._mouseUp(t)),!this._mouseStarted):this._mouseUp(t)},_mouseUp:function(t){return e(document).unbind("mousemove."+this.widgetName,this._mouseMoveDelegate).unbind("mouseup."+this.widgetName,this._mouseUpDelegate),this._mouseStarted&&(this._mouseStarted=!1,t.target===this._mouseDownEvent.target&&e.data(t.target,this.widgetName+".preventClickEvent",!0),this._mouseStop(t)),!1},_mouseDistanceMet:function(e){return Math.max(Math.abs(this._mouseDownEvent.pageX-e.pageX),Math.abs(this._mouseDownEvent.pageY-e.pageY))>=this.options.distance},_mouseDelayMet:function(e){return this.mouseDelayMet},_mouseStart:function(e){},_mouseDrag:function(e){},_mouseStop:function(e){},_mouseCapture:function(e){return!0}})
|
| })(jQuery);
|
| }catch (e) {
|
| System.out.println("coremenu failed to load jQuery.ui.mouse -- jQuery version conflict?");
|
| }
|
| if (!jQuery.ui.position)
|
| try{
|
| (function(e,t){function h(e,t,n){return[parseInt(e[0],10)*(l.test(e[0])?t/100:1),parseInt(e[1],10)*(l.test(e[1])?n/100:1)]}function p(t,n){return parseInt(e.css(t,n),10)||0}e.ui=e.ui||{};var n,r=Math.max,i=Math.abs,s=Math.round,o=/left|center|right/,u=/top|center|bottom/,a=/[\+\-]\d+%?/,f=/^\w+/,l=/%$/,c=e.fn.position;e.position={scrollbarWidth:function(){if(n!==t)return n;var r,i,s=e("<div style='display:block;width:50px;height:50px;overflow:hidden;'><div style='height:100px;width:auto;'></div></div>"),o=s.children()[0];return e("body").append(s),r=o.offsetWidth,s.css("overflow","scroll"),i=o.offsetWidth,r===i&&(i=s[0].clientWidth),s.remove(),n=r-i},getScrollInfo:function(t){var n=t.isWindow?"":t.element.css("overflow-x"),r=t.isWindow?"":t.element.css("overflow-y"),i=n==="scroll"||n==="auto"&&t.width<t.element[0].scrollWidth,s=r==="scroll"||r==="auto"&&t.height<t.element[0].scrollHeight;return{width:i?e.position.scrollbarWidth():0,height:s?e.position.scrollbarWidth():0}},getWithinInfo:function(t){var n=e(t||window),r=e.isWindow(n[0]);return{element:n,isWindow:r,offset:n.offset()||{left:0,top:0},scrollLeft:n.scrollLeft(),scrollTop:n.scrollTop(),width:r?n.width():n.outerWidth(),height:r?n.height():n.outerHeight()}}},e.fn.position=function(t){if(!t||!t.of)return c.apply(this,arguments);t=e.extend({},t);var n,l,d,v,m,g=e(t.of),y=e.position.getWithinInfo(t.within),b=e.position.getScrollInfo(y),w=g[0],E=(t.collision||"flip").split(" "),S={};return w.nodeType===9?(l=g.width(),d=g.height(),v={top:0,left:0}):e.isWindow(w)?(l=g.width(),d=g.height(),v={top:g.scrollTop(),left:g.scrollLeft()}):w.preventDefault?(t.at="left top",l=d=0,v={top:w.pageY,left:w.pageX}):(l=g.outerWidth(),d=g.outerHeight(),v=g.offset()),m=e.extend({},v),e.each(["my","at"],function(){var e=(t[this]||"").split(" "),n,r;e.length===1&&(e=o.test(e[0])?e.concat(["center"]):u.test(e[0])?["center"].concat(e):["center","center"]),e[0]=o.test(e[0])?e[0]:"center",e[1]=u.test(e[1])?e[1]:"center",n=a.exec(e[0]),r=a.exec(e[1]),S[this]=[n?n[0]:0,r?r[0]:0],t[this]=[f.exec(e[0])[0],f.exec(e[1])[0]]}),E.length===1&&(E[1]=E[0]),t.at[0]==="right"?m.left+=l:t.at[0]==="center"&&(m.left+=l/2),t.at[1]==="bottom"?m.top+=d:t.at[1]==="center"&&(m.top+=d/2),n=h(S.at,l,d),m.left+=n[0],m.top+=n[1],this.each(function(){var o,u,a=e(this),f=a.outerWidth(),c=a.outerHeight(),w=p(this,"marginLeft"),x=p(this,"marginTop"),T=f+w+p(this,"marginRight")+b.width,N=c+x+p(this,"marginBottom")+b.height,C=e.extend({},m),k=h(S.my,a.outerWidth(),a.outerHeight());t.my[0]==="right"?C.left-=f:t.my[0]==="center"&&(C.left-=f/2),t.my[1]==="bottom"?C.top-=c:t.my[1]==="center"&&(C.top-=c/2),C.left+=k[0],C.top+=k[1],e.support.offsetFractions||(C.left=s(C.left),C.top=s(C.top)),o={marginLeft:w,marginTop:x},e.each(["left","top"],function(r,i){e.ui.position[E[r]]&&e.ui.position[E[r]][i](C,{targetWidth:l,targetHeight:d,elemWidth:f,elemHeight:c,collisionPosition:o,collisionWidth:T,collisionHeight:N,offset:[n[0]+k[0],n[1]+k[1]],my:t.my,at:t.at,within:y,elem:a})}),e.fn.bgiframe&&a.bgiframe(),t.using&&(u=function(e){var n=v.left-C.left,s=n+l-f,o=v.top-C.top,u=o+d-c,h={target:{element:g,left:v.left,top:v.top,width:l,height:d},element:{element:a,left:C.left,top:C.top,width:f,height:c},horizontal:s<0?"left":n>0?"right":"center",vertical:u<0?"top":o>0?"bottom":"middle"};l<f&&i(n+s)<l&&(h.horizontal="center"),d<c&&i(o+u)<d&&(h.vertical="middle"),r(i(n),i(s))>r(i(o),i(u))?h.important="horizontal":h.important="vertical",t.using.call(this,e,h)}),a.offset(e.extend(C,{using:u}))})},e.ui.position={fit:{left:function(e,t){var n=t.within,i=n.isWindow?n.scrollLeft:n.offset.left,s=n.width,o=e.left-t.collisionPosition.marginLeft,u=i-o,a=o+t.collisionWidth-s-i,f;t.collisionWidth>s?u>0&&a<=0?(f=e.left+u+t.collisionWidth-s-i,e.left+=u-f):a>0&&u<=0?e.left=i:u>a?e.left=i+s-t.collisionWidth:e.left=i:u>0?e.left+=u:a>0?e.left-=a:e.left=r(e.left-o,e.left)},top:function(e,t){var n=t.within,i=n.isWindow?n.scrollTop:n.offset.top,s=t.within.height,o=e.top-t.collisionPosition.marginTop,u=i-o,a=o+t.collisionHeight-s-i,f;t.collisionHeight>s?u>0&&a<=0?(f=e.top+u+t.collisionHeight-s-i,e.top+=u-f):a>0&&u<=0?e.top=i:u>a?e.top=i+s-t.collisionHeight:e.top=i:u>0?e.top+=u:a>0?e.top-=a:e.top=r(e.top-o,e.top)}},flip:{left:function(e,t){var n=t.within,r=n.offset.left+n.scrollLeft,s=n.width,o=n.isWindow?n.scrollLeft:n.offset.left,u=e.left-t.collisionPosition.marginLeft,a=u-o,f=u+t.collisionWidth-s-o,l=t.my[0]==="left"?-t.elemWidth:t.my[0]==="right"?t.elemWidth:0,c=t.at[0]==="left"?t.targetWidth:t.at[0]==="right"?-t.targetWidth:0,h=-2*t.offset[0],p,d;if(a<0){p=e.left+l+c+h+t.collisionWidth-s-r;if(p<0||p<i(a))e.left+=l+c+h}else if(f>0){d=e.left-t.collisionPosition.marginLeft+l+c+h-o;if(d>0||i(d)<f)e.left+=l+c+h}},top:function(e,t){var n=t.within,r=n.offset.top+n.scrollTop,s=n.height,o=n.isWindow?n.scrollTop:n.offset.top,u=e.top-t.collisionPosition.marginTop,a=u-o,f=u+t.collisionHeight-s-o,l=t.my[1]==="top",c=l?-t.elemHeight:t.my[1]==="bottom"?t.elemHeight:0,h=t.at[1]==="top"?t.targetHeight:t.at[1]==="bottom"?-t.targetHeight:0,p=-2*t.offset[1],d,v;a<0?(v=e.top+c+h+p+t.collisionHeight-s-r,e.top+c+h+p>a&&(v<0||v<i(a))&&(e.top+=c+h+p)):f>0&&(d=e.top-t.collisionPosition.marginTop+c+h+p-o,e.top+c+h+p>f&&(d>0||i(d)<f)&&(e.top+=c+h+p))}},flipfit:{left:function(){e.ui.position.flip.left.apply(this,arguments),e.ui.position.fit.left.apply(this,arguments)},top:function(){e.ui.position.flip.top.apply(this,arguments),e.ui.position.fit.top.apply(this,arguments)}}},function(){var t,n,r,i,s,o=document.getElementsByTagName("body")[0],u=document.createElement("div");t=document.createElement(o?"div":"body"),r={visibility:"hidden",width:0,height:0,border:0,margin:0,background:"none"},o&&e.extend(r,{position:"absolute",left:"-1000px",top:"-1000px"});for(s in r)t.style[s]=r[s];t.appendChild(u),n=o||document.documentElement,n.insertBefore(t,n.firstChild),u.style.cssText="position: absolute; left: 10.7432222px;",i=e(u).offset().left,e.support.offsetFractions=i>10&&i<11,t.innerHTML="",n.removeChild(t)}(),e.uiBackCompat!==!1&&function(e){var n=e.fn.position;e.fn.position=function(r){if(!r||!r.offset)return n.call(this,r);var i=r.offset.split(" "),s=r.at.split(" ");return i.length===1&&(i[1]=i[0]),/^\d/.test(i[0])&&(i[0]="+"+i[0]),/^\d/.test(i[1])&&(i[1]="+"+i[1]),s.length===1&&(/left|center|right/.test(s[0])?s[1]="center":(s[1]=s[0],s[0]="center")),n.call(this,e.extend(r,{at:s[0]+i[0]+" "+s[1]+i[1],offset:t}))}}(jQuery)
|
| })(jQuery);
|
| }catch (e) {
|
| System.out.println("coremenu failed to load jQuery.ui.position -- jQuery version conflict?");
|
| }
|
|
|
| |
| |
| |
| |
|
|
|
|
| if (!jQuery.ui.menu)
|
| try{
|
| (function(e,t){var n=!1;e.widget("ui.menu",{version:"1.9.2",defaultElement:"<ul>",delay:300,options:{icons:{submenu:"ui-icon-carat-1-e"},menus:"ul",position:{my:"left top",at:"right top"},role:"menu",blur:null,focus:null,select:null},_create:function(){this.activeMenu=this.element,this.element.uniqueId().addClass("ui-menu ui-widget ui-widget-content ui-corner-all").toggleClass("ui-menu-icons",!!this.element.find(".ui-icon").length).attr({role:this.options.role,tabIndex:0}).bind("click"+this.eventNamespace,e.proxy(function(e){this.options.disabled&&e.preventDefault()},this)),this.options.disabled&&this.element.addClass("ui-state-disabled").attr("aria-disabled","true"),this._on({"mousedown .ui-menu-item > a":function(e){e.preventDefault()},"click .ui-state-disabled > a":function(e){e.preventDefault()},"click .ui-menu-item:has(a)":function(t){var r=e(t.target).closest(".ui-menu-item");!n&&r.not(".ui-state-disabled").length&&(n=!0,this.select(t),r.has(".ui-menu").length?this.expand(t):this.element.is(":focus")||(this.element.trigger("focus",[!0]),this.active&&this.active.parents(".ui-menu").length===1&&clearTimeout(this.timer)))},"mouseenter .ui-menu-item":function(t){var n=e(t.currentTarget);n.siblings().children(".ui-state-active").removeClass("ui-state-active"),this.focus(t,n)},mouseleave:"collapseAll","mouseleave .ui-menu":"collapseAll",focus:function(e,t){var n=this.active||this.element.children(".ui-menu-item").eq(0);t||this.focus(e,n)},blur:function(t){this._delay(function(){e.contains(this.element[0],this.document[0].activeElement)||this.collapseAll(t)})},keydown:"_keydown"}),this.refresh(),this._on(this.document,{click:function(t){e(t.target).closest(".ui-menu").length||this.collapseAll(t),n=!1}})},_destroy:function(){this.element.removeAttr("aria-activedescendant").find(".ui-menu").andSelf().removeClass("ui-menu ui-widget ui-widget-content ui-corner-all ui-menu-icons").removeAttr("role").removeAttr("tabIndex").removeAttr("aria-labelledby").removeAttr("aria-expanded").removeAttr("aria-hidden").removeAttr("aria-disabled").removeUniqueId().show(),this.element.find(".ui-menu-item").removeClass("ui-menu-item").removeAttr("role").removeAttr("aria-disabled").children("a").removeUniqueId().removeClass("ui-corner-all ui-state-hover").removeAttr("tabIndex").removeAttr("role").removeAttr("aria-haspopup").children().each(function(){var t=e(this);t.data("ui-menu-submenu-carat")&&t.remove()}),this.element.find(".ui-menu-divider").removeClass("ui-menu-divider ui-widget-content")},_keydown:function(t){function a(e){return e.replace(/[\-\[\]{}()*+?.,\\\^$|#\s]/g,"\\$&")}var n,r,i,s,o,u=!0;switch(t.keyCode){case e.ui.keyCode.PAGE_UP:this.previousPage(t);break;case e.ui.keyCode.PAGE_DOWN:this.nextPage(t);break;case e.ui.keyCode.HOME:this._move("first","first",t);break;case e.ui.keyCode.END:this._move("last","last",t);break;case e.ui.keyCode.UP:this.previous(t);break;case e.ui.keyCode.DOWN:this.next(t);break;case e.ui.keyCode.LEFT:this.collapse(t);break;case e.ui.keyCode.RIGHT:this.active&&!this.active.is(".ui-state-disabled")&&this.expand(t);break;case e.ui.keyCode.ENTER:case e.ui.keyCode.SPACE:this._activate(t);break;case e.ui.keyCode.ESCAPE:this.collapse(t);break;default:u=!1,r=this.previousFilter||"",i=String.fromCharCode(t.keyCode),s=!1,clearTimeout(this.filterTimer),i===r?s=!0:i=r+i,o=new RegExp("^"+a(i),"i"),n=this.activeMenu.children(".ui-menu-item").filter(function(){return o.test(e(this).children("a").text())}),n=s&&n.index(this.active.next())!==-1?this.active.nextAll(".ui-menu-item"):n,n.length||(i=String.fromCharCode(t.keyCode),o=new RegExp("^"+a(i),"i"),n=this.activeMenu.children(".ui-menu-item").filter(function(){return o.test(e(this).children("a").text())})),n.length?(this.focus(t,n),n.length>1?(this.previousFilter=i,this.filterTimer=this._delay(function(){delete this.previousFilter},1e3)):delete this.previousFilter):delete this.previousFilter}u&&t.preventDefault()},_activate:function(e){this.active.is(".ui-state-disabled")||(this.active.children("a[aria-haspopup='true']").length?this.expand(e):this.select(e))},refresh:function(){var t,n=this.options.icons.submenu,r=this.element.find(this.options.menus);r.filter(":not(.ui-menu)").addClass("ui-menu ui-widget ui-widget-content ui-corner-all").hide().attr({role:this.options.role,"aria-hidden":"true","aria-expanded":"false"}).each(function(){var t=e(this),r=t.prev("a"),i=e("<span>").addClass("ui-menu-icon ui-icon "+n).data("ui-menu-submenu-carat",!0);r.attr("aria-haspopup","true").prepend(i),t.attr("aria-labelledby",r.attr("id"))}),t=r.add(this.element),t.children(":not(.ui-menu-item):has(a)").addClass("ui-menu-item").attr("role","presentation").children("a").uniqueId().addClass("ui-corner-all").attr({tabIndex:-1,role:this._itemRole()}),t.children(":not(.ui-menu-item)").each(function(){var t=e(this);/[^\-+�G��G�?+�G��G��\s]/.test(t.text())||t.addClass("ui-widget-content ui-menu-divider")}),t.children(".ui-state-disabled").attr("aria-disabled","true"),this.active&&!e.contains(this.element[0],this.active[0])&&this.blur()},_itemRole:function(){return{menu:"menuitem",listbox:"option"}[this.options.role]},focus:function(e,t){var n,r;this.blur(e,e&&e.type==="focus"),this._scrollIntoView(t),this.active=t.first(),r=this.active.children("a").addClass("ui-state-focus"),this.options.role&&this.element.attr("aria-activedescendant",r.attr("id")),this.active.parent().closest(".ui-menu-item").children("a:first").addClass("ui-state-active"),e&&e.type==="keydown"?this._close():this.timer=this._delay(function(){this._close()},this.delay),n=t.children(".ui-menu"),n.length&&/^mouse/.test(e.type)&&this._startOpening(n),this.activeMenu=t.parent(),this._trigger("focus",e,{item:t})},_scrollIntoView:function(t){var n,r,i,s,o,u;this._hasScroll()&&(n=parseFloat(e.css(this.activeMenu[0],"borderTopWidth"))||0,r=parseFloat(e.css(this.activeMenu[0],"paddingTop"))||0,i=t.offset().top-this.activeMenu.offset().top-n-r,s=this.activeMenu.scrollTop(),o=this.activeMenu.height(),u=t.height(),i<0?this.activeMenu.scrollTop(s+i):i+u>o&&this.activeMenu.scrollTop(s+i-o+u))},blur:function(e,t){t||clearTimeout(this.timer);if(!this.active)return;this.active.children("a").removeClass("ui-state-focus"),this.active=null,this._trigger("blur",e,{item:this.active})},_startOpening:function(e){clearTimeout(this.timer);if(e.attr("aria-hidden")!=="true")return;this.timer=this._delay(function(){this._close(),this._open(e)},this.delay)},_open:function(t){var n=e.extend({of:this.active},this.options.position);clearTimeout(this.timer),this.element.find(".ui-menu").not(t.parents(".ui-menu")).hide().attr("aria-hidden","true"),t.show().removeAttr("aria-hidden").attr("aria-expanded","true").position(n)},collapseAll:function(t,n){clearTimeout(this.timer),this.timer=this._delay(function(){var r=n?this.element:e(t&&t.target).closest(this.element.find(".ui-menu"));r.length||(r=this.element),this._close(r),this.blur(t),this.activeMenu=r},this.delay)},_close:function(e){e||(e=this.active?this.active.parent():this.element),e.find(".ui-menu").hide().attr("aria-hidden","true").attr("aria-expanded","false").end().find("a.ui-state-active").removeClass("ui-state-active")},collapse:function(e){var t=this.active&&this.active.parent().closest(".ui-menu-item",this.element);t&&t.length&&(this._close(),this.focus(e,t))},expand:function(e){var t=this.active&&this.active.children(".ui-menu ").children(".ui-menu-item").first();t&&t.length&&(this._open(t.parent()),this._delay(function(){this.focus(e,t)}))},next:function(e){this._move("next","first",e)},previous:function(e){this._move("prev","last",e)},isFirstItem:function(){return this.active&&!this.active.prevAll(".ui-menu-item").length},isLastItem:function(){return this.active&&!this.active.nextAll(".ui-menu-item").length},_move:function(e,t,n){var r;this.active&&(e==="first"||e==="last"?r=this.active[e==="first"?"prevAll":"nextAll"](".ui-menu-item").eq(-1):r=this.active[e+"All"](".ui-menu-item").eq(0));if(!r||!r.length||!this.active)r=this.activeMenu.children(".ui-menu-item")[t]();this.focus(n,r)},nextPage:function(t){var n,r,i;if(!this.active){this.next(t);return}if(this.isLastItem())return;this._hasScroll()?(r=this.active.offset().top,i=this.element.height(),this.active.nextAll(".ui-menu-item").each(function(){return n=e(this),n.offset().top-r-i<0}),this.focus(t,n)):this.focus(t,this.activeMenu.children(".ui-menu-item")[this.active?"last":"first"]())},previousPage:function(t){var n,r,i;if(!this.active){this.next(t);return}if(this.isFirstItem())return;this._hasScroll()?(r=this.active.offset().top,i=this.element.height(),this.active.prevAll(".ui-menu-item").each(function(){return n=e(this),n.offset().top-r+i>0}),this.focus(t,n)):this.focus(t,this.activeMenu.children(".ui-menu-item").first())},_hasScroll:function(){return this.element.outerHeight()<this.element.prop("scrollHeight")},select:function(t){this.active=this.active||e(t.target).closest(".ui-menu-item");var n={item:this.active};this.active.has(".ui-menu").length||this.collapseAll(t,!0),this._trigger("select",t,n)}})
|
| })(jQuery);
|
| }catch (e) {
|
| System.out.println("JSmolMenu failed to load jQuery.ui.menu -- jQuery version conflict?");
|
| }
|
|
|
| ;(function(Swing) {
|
|
|
| |
| |
| |
| |
| |
| |
|
|
|
|
| if (Swing.menuInitialized)return;
|
| Swing.menuCounter = 0;
|
| Swing.menuInitialized = 1;
|
|
|
| Swing.__getMenuStyle = function(applet) { return '\
|
| .jmolPopupMenu{font-family:Arial,sans-serif;font-size:11px;position:absolute;z-index:'+Jmol._getZ(applet, "menu")+'}\
|
| .jmolPopupMenu,.jmolPopupMenu .ui-corner-all{border-radius:5px}\
|
| .jmolPopupMenu,.jmolPopupMenu .ui-widget-content{border:1px solid #a6c9e2;background-color:#fcfdfd;color:#222}\
|
| .jmolPopupMenu a{color:#222;font-size:10px;}\
|
| .jmolPopupMenu input[type="checkbox"]{vertical-align:middle;}\
|
| .jmolPopupMenu,.jmolPopupMenu .ui-menu{list-style:none;padding:2px;margin:0;display:block;outline:none;box-shadow:1px 1px 5px rgba(50,50,50,0.75)}\
|
| .jmolPopupMenu .ui-menu{margin-top:-3px;position:absolute}\
|
| .jmolPopupMenu .ui-menu-item{cursor:pointer;margin:0 2ex 0 0;padding:0;width:100%}\
|
| .jmolPopupMenu .ui-menu-divider{margin:3px 1px;height:0;font-size:0;line-height:0;border-width:1px 0 0 0}\
|
| .jmolPopupMenu .ui-menu-item a{text-decoration:none;display:block;padding:0.05em 0.4em;white-space:nowrap;border:1px solid transparent}\
|
| .jmolPopupMenu .ui-menu-icons{position:relative}\
|
| .jmolPopupMenu .ui-menu-icons .ui-menu-item a{position:relative;padding-left:2em}\
|
| .jmolPopupMenu .ui-icon{display:block;text-indent:-99999px;overflow:hidden;background-repeat:no-repeat;position:absolute;top:.2em;left:.2em}\
|
| .jmolPopupMenu .ui-menu-icon{position:static;float:right}\
|
| .jmolPopupMenu .ui-icon-carat-1-e{min-width:2ex;text-align:right;background-image:none;background-position:0 0}\
|
| .jmolPopupMenu .ui-icon-carat-1-e:after{content:"\\25B8"}\
|
| .jmolPopupMenu .ui-state-default{border:1px solid #c5dbec;background:#dfeffc;color:#2e6e9e}\
|
| .jmolPopupMenu .ui-state-default a{color:#2e6e9e;text-decoration:none}\
|
| .jmolPopupMenu .ui-state-hover,.jmolPopupMenu .ui-state-focus{border:1px solid #79b7e7;background:#d0e5f5;color:#1d5987}\
|
| .jmolPopupMenu .ui-state-hover a{color:#1d5987;text-decoration:none}\
|
| .jmolPopupMenu .ui-state-active{border:1px solid #79b7e7;background:#f5f8f9;color:#e17009}\
|
| .jmolPopupMenu .ui-state-active a{color:#e17009;text-decoration:none}\
|
| .jmolPopupMenu .ui-state-highlight{border:1px solid #fad42e;background:#fbec88;color:#363636}\
|
| .jmolPopupMenu .ui-state-highlight a{color:#363636}\
|
| .jmolPopupMenu .ui-state-disabled *{color:#d6d6d6!important;font-weight:normal;cursor:default}\
|
| .jmolPopupMenu .ui-state-disabled a:hover{background-color:transparent!important;border-color:transparent!important}\
|
| .jmolPopupMenu .ui-state-disabled .ui-icon{filter:Alpha(Opacity=35)}'};
|
|
|
| Swing.setMenu = function(menu) {
|
|
|
|
|
| Swing.__getMenuStyle && Jmol.$after("head", '<style>'+Swing.__getMenuStyle(menu.applet)+'</style>');
|
| Swing.__getStyle = null;
|
| menu.tainted = true;
|
| menu.popupMenu = menu;
|
| menu.id = "top";
|
| menu.id = Swing.getMenuID(menu);
|
| menu.applet._menus || (menu.applet._menus = {});
|
| menu.applet._menus[menu.name] = menu;
|
| Jmol.$after("body",'<ul id="' + menu.id + '" class="jmolPopupMenu"></ul>');
|
| menu.setContainer(Jmol.$('#' + menu.id));
|
| }
|
|
|
| Swing.showMenu = function(menu, x, y) {
|
|
|
|
|
| if (Jmol._showMenuCallback)
|
| Jmol._showMenuCallback(menu, x, y);
|
| if (menu.tainted) {
|
| menu.container.html(menu.toHTML());
|
| menu.tainted = false;
|
| Swing.bindMenuActionCommands(menu, true);
|
| }
|
| menu.setPosition();
|
| menu.container.hide().menu().menu('refresh').show();
|
| menu._visible = true;
|
| menu.timestamp = System.currentTimeMillis();
|
| menu.dragBind(true);
|
| menu.container.unbind('clickoutjsmol');
|
| if (!Jmol._persistentMenu)
|
| menu.container.bind('clickoutjsmol mousemoveoutjsmol', function(evspecial, target, ev) {
|
| if (System.currentTimeMillis() - menu.timestamp > 1000)
|
| Swing.hideMenu(menu);
|
| });
|
| menu.container.bind("contextmenu", function() {return false;})
|
| }
|
|
|
| Swing.disposeMenu = function(menu) {
|
|
|
| if (Jmol._persistentMenu)
|
| return
|
| Swing.hideMenu(menu);
|
| Swing.bindMenuActionCommands(menu, false);
|
| delete menu.applet._menus[menu.name];
|
| }
|
|
|
| Swing.initMenuItem = function(item) {
|
|
|
| item.applet = item.popupMenu.applet;
|
| item.id = Swing.getMenuID(item);
|
| item.icon && (item.icon = '<img src="' + item.applet._j2sPath + '/' + item.icon + '" style="max-height: 20px;" />')
|
| }
|
|
|
| Swing.getMenuID = function(item) {
|
|
|
| var popup = item.popupMenu;
|
| return popup.applet._id + '_' + popup.name + "_" + item.id + '_' + (++Swing.menuCounter);
|
| }
|
|
|
| Swing.hideMenu = function(menu) {
|
|
|
| if (!menu._visible)return;
|
|
|
| menu.dragBind(false);
|
| menu.container.hide();
|
| menu._visible = menu.isDragging = false;
|
| };
|
|
|
| Swing.bindMenuActionCommands = function(menu, isBind) {
|
|
|
| var n = menu.getComponentCount();
|
| for(var i = 0; i < n; i++)
|
| Swing.bindMenuActionCommands(menu.getComponent(i), isBind);
|
| Jmol.$documentOff('click', menu.id);
|
| if (isBind)
|
| Jmol.$documentOn('click', menu.id, function() {
|
| if (menu.itemListener) {
|
| menu.selected = (menu.btnType == J.awtjs.swing.JMenuItem.TYPE_CHECKBOX ? Jmol.$prop(menu.id + "-cb", "checked") : true);
|
| Swing.hideMenus(menu.applet);
|
| menu.itemListener.itemStateChanged({getSource:function(){return menu}});
|
| } else if (menu.actionListener) {
|
| Swing.hideMenus(menu.applet);
|
| menu.actionListener.actionPerformed({getSource:function(){return menu},getActionCommand:function(){return menu.actionCommand}});
|
| }
|
| });
|
| }
|
|
|
| })(Jmol.Swing);
|
|
|
| })(Jmol.__$);Clazz_declarePackage ("J.popup");
|
| Clazz_load (["J.popup.PopupResource"], "J.popup.MainPopupResourceBundle", ["JU.PT", "J.i18n.GT", "JV.JC", "$.Viewer"], function () {
|
| c$ = Clazz_declareType (J.popup, "MainPopupResourceBundle", J.popup.PopupResource);
|
| Clazz_overrideMethod (c$, "getMenuName",
|
| function () {
|
| return "popupMenu";
|
| });
|
| Clazz_overrideMethod (c$, "buildStructure",
|
| function (menuStructure) {
|
| this.addItems (J.popup.MainPopupResourceBundle.menuContents);
|
| this.addItems (J.popup.MainPopupResourceBundle.structureContents);
|
| if (menuStructure != null) this.setStructure (menuStructure, new J.i18n.GT ());
|
| }, "~S");
|
| c$.Box = Clazz_defineMethod (c$, "Box",
|
| function (cmd) {
|
| return "if (showBoundBox or showUnitcell) {" + cmd + "} else {boundbox on;" + cmd + ";boundbox off}";
|
| }, "~S");
|
| Clazz_overrideMethod (c$, "getWordContents",
|
| function () {
|
| var wasTranslating = J.i18n.GT.setDoTranslate (true);
|
| var vdw = J.i18n.GT.$ ("{0}% van der Waals");
|
| var exm = J.i18n.GT.$ ("Export {0} 3D model");
|
| var exi = J.i18n.GT.$ ("Export {0} image");
|
| var rld = J.i18n.GT.$ ("Reload {0}");
|
| var scl = J.i18n.GT.$ ("Scale {0}");
|
| var ang = J.i18n.GT.$ ("{0} \u00C5");
|
| var pxl = J.i18n.GT.$ ("{0} px");
|
| var words = Clazz_newArray (-1, ["cnmrMenu", J.i18n.GT.$ ("13C-NMR"), "hnmrMenu", J.i18n.GT.$ ("1H-NMR"), "aboutMenu", J.i18n.GT.$ ("About..."), "negativeCharge", J.i18n.GT.$ ("Acidic Residues (-)"), "allModelsText", J.i18n.GT.$ ("All {0} models"), "allHetero", J.i18n.GT.$ ("All PDB \"HETATM\""), "Solvent", J.i18n.GT.$ ("All Solvent"), "Water", J.i18n.GT.$ ("All Water"), "selectAll", J.i18n.GT.$ ("All"), "allProtein", null, "allNucleic", null, "allCarbo", null, "altloc#PDB", J.i18n.GT.$ ("Alternative Location"), "amino#PDB", J.i18n.GT.$ ("Amino Acid"), "byAngstromMenu", J.i18n.GT.$ ("Angstrom Width"), "animModeMenu", J.i18n.GT.$ ("Animation Mode"), "FRAMESanimateMenu", J.i18n.GT.$ ("Animation"), "atPairs", J.i18n.GT.$ ("AT pairs"), "atomMenu", J.i18n.GT.$ ("Atoms"), "[color_atoms]Menu", null, "atomsText", J.i18n.GT.$ ("atoms: {0}"), "auPairs", J.i18n.GT.$ ("AU pairs"), "[color_axes]Menu", J.i18n.GT.$ ("Axes"), "showAxesCB", null, "[set_axes]Menu", null, "axisA", J.i18n.GT.$ ("Axis a"), "axisB", J.i18n.GT.$ ("Axis b"), "axisC", J.i18n.GT.$ ("Axis c"), "axisX", J.i18n.GT.$ ("Axis x"), "axisY", J.i18n.GT.$ ("Axis y"), "axisZ", J.i18n.GT.$ ("Axis z"), "back", J.i18n.GT.$ ("Back"), "proteinBackbone", J.i18n.GT.$ ("Backbone"), "nucleicBackbone", null, "backbone", null, "[color_backbone]Menu", null, "[color_background]Menu", J.i18n.GT.$ ("Background"), "renderBallAndStick", J.i18n.GT.$ ("Ball and Stick"), "nucleicBases", J.i18n.GT.$ ("Bases"), "positiveCharge", J.i18n.GT.$ ("Basic Residues (+)"), "best", J.i18n.GT.$ ("Best"), "biomoleculeText", J.i18n.GT.$ ("biomolecule {0} ({1} atoms)"), "biomoleculesMenuText", J.i18n.GT.$ ("Biomolecules"), "black", J.i18n.GT.$ ("Black"), "blue", J.i18n.GT.$ ("Blue"), "bondMenu", J.i18n.GT.$ ("Bonds"), "[color_bonds]Menu", null, "bondsText", J.i18n.GT.$ ("bonds: {0}"), "bottom", J.i18n.GT.$ ("Bottom"), "[color_boundbox]Menu", J.i18n.GT.$ ("Boundbox"), "[set_boundbox]Menu", null, "showBoundBoxCB", null, "PDBheteroComputedMenu", J.i18n.GT.$ ("By HETATM"), "PDBaaResiduesComputedMenu", J.i18n.GT.$ ("By Residue Name"), "PDBnucleicResiduesComputedMenu", null, "PDBcarboResiduesComputedMenu", null, "schemeMenu", J.i18n.GT.$ ("By Scheme"), "[color_]schemeMenu", null, "hbondCalc", J.i18n.GT.$ ("Calculate"), "SIGNEDJAVAcaptureRock", J.i18n.GT.$ ("Capture rock"), "SIGNEDJAVAcaptureSpin", J.i18n.GT.$ ("Capture spin"), "SIGNEDJAVAcaptureMenuSPECIAL", J.i18n.GT.$ ("Capture"), "PDBcarboMenu", J.i18n.GT.$ ("Carbohydrate"), "cartoonRockets", J.i18n.GT.$ ("Cartoon Rockets"), "PDBrenderCartoonsOnly", J.i18n.GT.$ ("Cartoon"), "cartoon", null, "[color_cartoon]sMenu", null, "pickCenter", J.i18n.GT.$ ("Center"), "labelCentered", J.i18n.GT.$ ("Centered"), "chain#PDB", J.i18n.GT.$ ("Chain"), "chainsText", J.i18n.GT.$ ("chains: {0}"), "colorChargeMenu", J.i18n.GT.$ ("Charge"), "measureAngle", J.i18n.GT.$ ("Click for angle measurement"), "measureDistance", J.i18n.GT.$ ("Click for distance measurement"), "measureTorsion", J.i18n.GT.$ ("Click for torsion (dihedral) measurement"), "PDBmeasureSequence", J.i18n.GT.$ ("Click two atoms to display a sequence in the console"), "modelSetCollectionText", J.i18n.GT.$ ("Collection of {0} models"), "colorMenu", J.i18n.GT.$ ("Color"), "computationMenu", J.i18n.GT.$ ("Computation"), "configurationMenuText", J.i18n.GT.$ ("Configurations ({0})"), "configurationComputedMenu", J.i18n.GT.$ ("Configurations"), "showConsole", J.i18n.GT.$ ("Console"), "renderCpkSpacefill", J.i18n.GT.$ ("CPK Spacefill"), "stereoCrossEyed", J.i18n.GT.$ ("Cross-eyed viewing"), "showState", J.i18n.GT.$ ("Current state"), "cyan", J.i18n.GT.$ ("Cyan"), "darkgray", J.i18n.GT.$ ("Dark Gray"), "measureDelete", J.i18n.GT.$ ("Delete measurements"), "SIGNEDJAVAcaptureOff", J.i18n.GT.$ ("Disable capturing"), "hideNotSelectedCB", J.i18n.GT.$ ("Display Selected Only"), "distanceAngstroms", J.i18n.GT.$ ("Distance units Angstroms"), "distanceNanometers", J.i18n.GT.$ ("Distance units nanometers"), "distancePicometers", J.i18n.GT.$ ("Distance units picometers"), "ssbondMenu", J.i18n.GT.$ ("Disulfide Bonds"), "[color_ssbonds]Menu", null, "DNA", J.i18n.GT.$ ("DNA"), "surfDots", J.i18n.GT.$ ("Dot Surface"), "dotted", J.i18n.GT.$ ("Dotted"), "measureOff", J.i18n.GT.$ ("Double-Click begins and ends all measurements"), "cpk", J.i18n.GT.$ ("Element (CPK)"), "elementsComputedMenu", J.i18n.GT.$ ("Element"), "SIGNEDJAVAcaptureEnd", J.i18n.GT.$ ("End capturing"), "exportMenu", J.i18n.GT.$ ("Export"), "extractMOL", J.i18n.GT.$ ("Extract MOL data"), "showFile", J.i18n.GT.$ ("File Contents"), "showFileHeader", J.i18n.GT.$ ("File Header"), "fileMenu", J.i18n.GT.$ ("File"), "formalcharge", J.i18n.GT.$ ("Formal Charge"), "front", J.i18n.GT.$ ("Front"), "gcPairs", J.i18n.GT.$ ("GC pairs"), "gold", J.i18n.GT.$ ("Gold"), "gray", J.i18n.GT.$ ("Gray"), "green", J.i18n.GT.$ ("Green"), "group#PDB", J.i18n.GT.$ ("Group"), "groupsText", J.i18n.GT.$ ("groups: {0}"), "PDBheteroMenu", J.i18n.GT.$ ("Hetero"), "off#axes", J.i18n.GT.$ ("Hide"), "showHistory", J.i18n.GT.$ ("History"), "hbondMenu", J.i18n.GT.$ ("Hydrogen Bonds"), "[color_hbonds]Menu", null, "pickIdent", J.i18n.GT.$ ("Identity"), "indigo", J.i18n.GT.$ ("Indigo"), "none", J.i18n.GT.$ ("Inherit"), "invertSelection", J.i18n.GT.$ ("Invert Selection"), "showIsosurface", J.i18n.GT.$ ("Isosurface JVXL data"), "help", J.i18n.GT.$ ("Jmol Script Commands"), "pickLabel", J.i18n.GT.$ ("Label"), "labelMenu", J.i18n.GT.$ ("Labels"), "[color_labels]Menu", null, "languageComputedMenu", J.i18n.GT.$ ("Language"), "left", J.i18n.GT.$ ("Left"), "Ligand", J.i18n.GT.$ ("Ligand"), "lightgray", J.i18n.GT.$ ("Light Gray"), "measureList", J.i18n.GT.$ ("List measurements"), "loadBiomoleculeText", J.i18n.GT.$ ("load biomolecule {0} ({1} atoms)"), "SIGNEDloadFileUnitCell", J.i18n.GT.$ ("Load full unit cell"), "loadMenu", J.i18n.GT.$ ("Load"), "loop", J.i18n.GT.$ ("Loop"), "labelLowerLeft", J.i18n.GT.$ ("Lower Left"), "labelLowerRight", J.i18n.GT.$ ("Lower Right"), "mainMenuText", J.i18n.GT.$ ("Main Menu"), "opaque", J.i18n.GT.$ ("Make Opaque"), "surfOpaque", null, "translucent", J.i18n.GT.$ ("Make Translucent"), "surfTranslucent", null, "maroon", J.i18n.GT.$ ("Maroon"), "measureMenu", J.i18n.GT.$ ("Measurements"), "showMeasure", null, "modelMenuText", J.i18n.GT.$ ("model {0}"), "hiddenModelSetText", J.i18n.GT.$ ("Model information"), "modelkit", J.i18n.GT.$ ("Model kit"), "showModel", J.i18n.GT.$ ("Model"), "FRAMESbyModelComputedMenu", J.i18n.GT.$ ("Model/Frame"), "modelKitMode", J.i18n.GT.$ ("modelKitMode"), "surf2MEP", J.i18n.GT.$ ("Molecular Electrostatic Potential (range -0.1 0.1)"), "surfMEP", J.i18n.GT.$ ("Molecular Electrostatic Potential (range ALL)"), "showMo", J.i18n.GT.$ ("Molecular orbital JVXL data"), "surfMoComputedMenuText", J.i18n.GT.$ ("Molecular Orbitals ({0})"), "surfMolecular", J.i18n.GT.$ ("Molecular Surface"), "molecule", J.i18n.GT.$ ("Molecule"), "monomer#PDB", J.i18n.GT.$ ("Monomer"), "mouse", J.i18n.GT.$ ("Mouse Manual"), "nextframe", J.i18n.GT.$ ("Next Frame"), "modelSetMenu", J.i18n.GT.$ ("No atoms loaded"), "exceptWater", J.i18n.GT.$ ("Nonaqueous HETATM") + " (hetero and not water)", "nonWaterSolvent", J.i18n.GT.$ ("Nonaqueous Solvent") + " (solvent and not water)", "PDBnoneOfTheAbove", J.i18n.GT.$ ("None of the above"), "selectNone", J.i18n.GT.$ ("None"), "stereoNone", null, "labelNone", null, "nonpolar", J.i18n.GT.$ ("Nonpolar Residues"), "PDBnucleicMenu", J.i18n.GT.$ ("Nucleic"), "atomNone", J.i18n.GT.$ ("Off"), "bondNone", null, "hbondNone", null, "ssbondNone", null, "structureNone", null, "vibrationOff", null, "vectorOff", null, "spinOff", null, "pickOff", null, "surfOff", null, "olive", J.i18n.GT.$ ("Olive"), "bondWireframe", J.i18n.GT.$ ("On"), "hbondWireframe", null, "ssbondWireframe", null, "vibrationOn", null, "vectorOn", null, "spinOn", null, "on", null, "SIGNEDloadPdb", J.i18n.GT.$ ("Open from PDB"), "SIGNEDloadFile", J.i18n.GT.$ ("Open local file"), "SIGNEDloadScript", J.i18n.GT.$ ("Open script"), "SIGNEDloadUrl", J.i18n.GT.$ ("Open URL"), "minimize", J.i18n.GT.$ ("Optimize structure"), "orange", J.i18n.GT.$ ("Orange"), "orchid", J.i18n.GT.$ ("Orchid"), "showOrient", J.i18n.GT.$ ("Orientation"), "palindrome", J.i18n.GT.$ ("Palindrome"), "partialcharge", J.i18n.GT.$ ("Partial Charge"), "pause", J.i18n.GT.$ ("Pause"), "perspectiveDepthCB", J.i18n.GT.$ ("Perspective Depth"), "byPixelMenu", J.i18n.GT.$ ("Pixel Width"), "onceThrough", J.i18n.GT.$ ("Play Once"), "play", J.i18n.GT.$ ("Play"), "polar", J.i18n.GT.$ ("Polar Residues"), "polymersText", J.i18n.GT.$ ("polymers: {0}"), "labelPositionMenu", J.i18n.GT.$ ("Position Label on Atom"), "prevframe", J.i18n.GT.$ ("Previous Frame"), "PDBproteinMenu", J.i18n.GT.$ ("Protein"), "colorrasmolCB", J.i18n.GT.$ ("RasMol Colors"), "red", J.i18n.GT.$ ("Red"), "stereoRedBlue", J.i18n.GT.$ ("Red+Blue glasses"), "stereoRedCyan", J.i18n.GT.$ ("Red+Cyan glasses"), "stereoRedGreen", J.i18n.GT.$ ("Red+Green glasses"), "SIGNEDJAVAcaptureOn", J.i18n.GT.$ ("Re-enable capturing"), "FILEUNITninePoly", J.i18n.GT.$ ("Reload + Polyhedra"), "reload", J.i18n.GT.$ ("Reload"), "restart", J.i18n.GT.$ ("Restart"), "resume", J.i18n.GT.$ ("Resume"), "playrev", J.i18n.GT.$ ("Reverse"), "rewind", J.i18n.GT.$ ("Rewind"), "ribbons", J.i18n.GT.$ ("Ribbons"), "[color_ribbon]sMenu", null, "right", J.i18n.GT.$ ("Right"), "RNA", J.i18n.GT.$ ("RNA"), "rockets", J.i18n.GT.$ ("Rockets"), "[color_rockets]Menu", null, "salmon", J.i18n.GT.$ ("Salmon"), "writeFileTextVARIABLE", J.i18n.GT.$ ("Save a copy of {0}"), "SIGNEDwriteJmol", J.i18n.GT.$ ("Save as PNG/JMOL (image+zip)"), "SIGNEDwriteIsosurface", J.i18n.GT.$ ("Save JVXL isosurface"), "writeHistory", J.i18n.GT.$ ("Save script with history"), "writeState", J.i18n.GT.$ ("Save script with state"), "saveMenu", J.i18n.GT.$ ("Save"), "sceneComputedMenu", J.i18n.GT.$ ("Scenes"), "renderSchemeMenu", J.i18n.GT.$ ("Scheme"), "aaStructureMenu", J.i18n.GT.$ ("Secondary Structure"), "structure#PDB", null, "selectMenuText", J.i18n.GT.$ ("Select ({0})"), "pickAtom", J.i18n.GT.$ ("Select atom"), "PDBpickChain", J.i18n.GT.$ ("Select chain"), "pickElement", J.i18n.GT.$ ("Select element"), "PDBpickGroup", J.i18n.GT.$ ("Select group"), "pickMolecule", J.i18n.GT.$ ("Select molecule"), "SYMMETRYpickSite", J.i18n.GT.$ ("Select site"), "showSelectionsCB", J.i18n.GT.$ ("Selection Halos"), "SIGNEDJAVAcaptureFpsSPECIAL", J.i18n.GT.$ ("Set capture replay rate"), "[set_spin_FPS]Menu", J.i18n.GT.$ ("Set FPS"), "FRAMESanimFpsMenu", null, "PDBhbondBackbone", J.i18n.GT.$ ("Set H-Bonds Backbone"), "PDBhbondSidechain", J.i18n.GT.$ ("Set H-Bonds Side Chain"), "pickingMenu", J.i18n.GT.$ ("Set picking"), "PDBssbondBackbone", J.i18n.GT.$ ("Set SS-Bonds Backbone"), "PDBssbondSidechain", J.i18n.GT.$ ("Set SS-Bonds Side Chain"), "[set_spin_X]Menu", J.i18n.GT.$ ("Set X Rate"), "[set_spin_Y]Menu", J.i18n.GT.$ ("Set Y Rate"), "[set_spin_Z]Menu", J.i18n.GT.$ ("Set Z Rate"), "shapely#PDB", J.i18n.GT.$ ("Shapely"), "showHydrogensCB", J.i18n.GT.$ ("Show Hydrogens"), "showMeasurementsCB", J.i18n.GT.$ ("Show Measurements"), "SYMMETRYpickSymmetry", J.i18n.GT.$ ("Show symmetry operation"), "showMenu", J.i18n.GT.$ ("Show"), "proteinSideChains", J.i18n.GT.$ ("Side Chains"), "slateblue", J.i18n.GT.$ ("Slate Blue"), "SYMMETRYShowComputedMenu", J.i18n.GT.$ ("Space Group"), "showSpacegroup", null, "spectraMenu", J.i18n.GT.$ ("Spectra"), "spinMenu", J.i18n.GT.$ ("Spin"), "pickSpin", null, "SIGNEDJAVAcaptureBegin", J.i18n.GT.$ ("Start capturing"), "stereoMenu", J.i18n.GT.$ ("Stereographic"), "renderSticks", J.i18n.GT.$ ("Sticks"), "stop", J.i18n.GT.$ ("Stop"), "strands", J.i18n.GT.$ ("Strands"), "[color_strands]Menu", null, "PDBstructureMenu", J.i18n.GT.$ ("Structures"), "colorPDBStructuresMenu", null, "renderMenu", J.i18n.GT.$ ("Style"), "[color_isosurface]Menu", J.i18n.GT.$ ("Surfaces"), "surfaceMenu", null, "SYMMETRYSelectComputedMenu", J.i18n.GT.$ ("Symmetry"), "SYMMETRYshowSymmetry", null, "FILEUNITMenu", null, "systemMenu", J.i18n.GT.$ ("System"), "relativeTemperature#BFACTORS", J.i18n.GT.$ ("Temperature (Relative)"), "fixedTemperature#BFACTORS", J.i18n.GT.$ ("Temperature (Fixed)"), "SIGNEDJAVAcaptureLoopingSPECIAL", J.i18n.GT.$ ("Toggle capture looping"), "top", JU.PT.split (J.i18n.GT.$ ("Top[as in \"view from the top, from above\" - (translators: remove this bracketed part]"), "[")[0], "PDBrenderTraceOnly", J.i18n.GT.$ ("Trace"), "trace", null, "[color_trace]Menu", null, "translations", J.i18n.GT.$ ("Translations"), "noCharge", J.i18n.GT.$ ("Uncharged Residues"), "[color_UNITCELL]Menu", J.i18n.GT.$ ("Unit cell"), "UNITCELLshow", null, "[set_UNITCELL]Menu", null, "showUNITCELLCB", null, "labelUpperLeft", J.i18n.GT.$ ("Upper Left"), "labelUpperRight", J.i18n.GT.$ ("Upper Right"), "surfVDW", J.i18n.GT.$ ("van der Waals Surface"), "VIBRATIONvectorMenu", J.i18n.GT.$ ("Vectors"), "property_vxyz#VIBRATION", null, "[color_vectors]Menu", null, "VIBRATIONMenu", J.i18n.GT.$ ("Vibration"), "viewMenuText", J.i18n.GT.$ ("View {0}"), "viewMenu", J.i18n.GT.$ ("View"), "violet", J.i18n.GT.$ ("Violet"), "stereoWallEyed", J.i18n.GT.$ ("Wall-eyed viewing"), "white", J.i18n.GT.$ ("White"), "renderWireframe", J.i18n.GT.$ ("Wireframe"), "labelName", J.i18n.GT.$ ("With Atom Name"), "labelNumber", J.i18n.GT.$ ("With Atom Number"), "labelSymbol", J.i18n.GT.$ ("With Element Symbol"), "yellow", J.i18n.GT.$ ("Yellow"), "zoomIn", J.i18n.GT.$ ("Zoom In"), "zoomOut", J.i18n.GT.$ ("Zoom Out"), "zoomMenu", J.i18n.GT.$ ("Zoom"), "vector005", J.i18n.GT.o (ang, "0.05"), "bond100", J.i18n.GT.o (ang, "0.10"), "hbond100", null, "ssbond100", null, "vector01", null, "10a", null, "bond150", J.i18n.GT.o (ang, "0.15"), "hbond150", null, "ssbond150", null, "bond200", J.i18n.GT.o (ang, "0.20"), "hbond200", null, "ssbond200", null, "20a", null, "bond250", J.i18n.GT.o (ang, "0.25"), "hbond250", null, "ssbond250", null, "25a", null, "bond300", J.i18n.GT.o (ang, "0.30"), "hbond300", null, "ssbond300", null, "50a", J.i18n.GT.o (ang, "0.50"), "100a", J.i18n.GT.o (ang, "1.0"), "1p", J.i18n.GT.i (pxl, 1), "10p", J.i18n.GT.i (pxl, 10), "3p", J.i18n.GT.i (pxl, 3), "vector3", null, "5p", J.i18n.GT.i (pxl, 5), "atom100", J.i18n.GT.i (vdw, 100), "atom15", J.i18n.GT.i (vdw, 15), "atom20", J.i18n.GT.i (vdw, 20), "atom25", J.i18n.GT.i (vdw, 25), "atom50", J.i18n.GT.i (vdw, 50), "atom75", J.i18n.GT.i (vdw, 75), "SIGNEDNOGLwriteIdtf", J.i18n.GT.o (exm, "IDTF"), "SIGNEDNOGLwriteMaya", J.i18n.GT.o (exm, "Maya"), "SIGNEDNOGLwriteVrml", J.i18n.GT.o (exm, "VRML"), "SIGNEDNOGLwriteX3d", J.i18n.GT.o (exm, "X3D"), "SIGNEDNOGLwriteSTL", J.i18n.GT.o (exm, "STL"), "SIGNEDNOGLwriteGif", J.i18n.GT.o (exi, "GIF"), "SIGNEDNOGLwriteJpg", J.i18n.GT.o (exi, "JPG"), "SIGNEDNOGLwritePng", J.i18n.GT.o (exi, "PNG"), "SIGNEDNOGLwritePngJmol", J.i18n.GT.o (exi, "PNG+JMOL"), "SIGNEDNOGLwritePovray", J.i18n.GT.o (exi, "POV-Ray"), "FILEUNITnineRestricted", J.i18n.GT.o (J.i18n.GT.$ ("Reload {0} + Display {1}"), Clazz_newArray (-1, ["{444 666 1}", "555"])), "FILEMOLload", J.i18n.GT.o (rld, "(molecular)"), "FILEUNITone", J.i18n.GT.o (rld, "{1 1 1}"), "FILEUNITnine", J.i18n.GT.o (rld, "{444 666 1}"), "vectorScale02", J.i18n.GT.o (scl, "0.2"), "vectorScale05", J.i18n.GT.o (scl, "0.5"), "vectorScale1", J.i18n.GT.o (scl, "1"), "vectorScale2", J.i18n.GT.o (scl, "2"), "vectorScale5", J.i18n.GT.o (scl, "5"), "surfSolvent14", J.i18n.GT.o (J.i18n.GT.$ ("Solvent Surface ({0}-Angstrom probe)"), "1.4"), "surfSolventAccessible14", J.i18n.GT.o (J.i18n.GT.$ ("Solvent-Accessible Surface (VDW + {0} Angstrom)"), "1.4"), "vibration20", "*2", "vibration05", "/2", "JAVAmemTotal", "?", "JAVAmemMax", null, "JAVAprocessors", null, "s0", "0", "animfps10", "10", "s10", null, "zoom100", "100%", "zoom150", "150%", "animfps20", "20", "s20", null, "zoom200", "200%", "animfps30", "30", "s30", null, "s40", "40", "zoom400", "400%", "animfps5", "5", "s5", null, "animfps50", "50", "s50", null, "zoom50", "50%", "zoom800", "800%", "JSConsole", "JavaScript Console", "jmolMenu", "Jmol", "date", JV.JC.date, "version", JV.JC.version, "javaVender", JV.Viewer.strJavaVendor, "javaVersion", JV.Viewer.strJavaVersion, "os", JV.Viewer.strOSName, "jmolorg", "http://www.jmol.org"]);
|
| J.i18n.GT.setDoTranslate (wasTranslating);
|
| for (var i = 1, n = words.length; i < n; i += 2) if (words[i] == null) words[i] = words[i - 2];
|
|
|
| return words;
|
| });
|
| Clazz_overrideMethod (c$, "getMenuAsText",
|
| function (title) {
|
| return this.getStuctureAsText (title, J.popup.MainPopupResourceBundle.menuContents, J.popup.MainPopupResourceBundle.structureContents);
|
| }, "~S");
|
| Clazz_defineStatics (c$,
|
| "MENU_NAME", "popupMenu");
|
| c$.menuContents = c$.prototype.menuContents = Clazz_newArray (-1, [ Clazz_newArray (-1, ["@COLOR", "black darkgray lightgray white - red orange yellow green cyan blue indigo violet"]), Clazz_newArray (-1, ["@AXESCOLOR", "gray salmon maroon olive slateblue gold orchid"]), Clazz_newArray (-1, ["popupMenu", "fileMenu modelSetMenu FRAMESbyModelComputedMenu configurationComputedMenu - selectMenuText viewMenu renderMenu colorMenu - surfaceMenu FILEUNITMenu - sceneComputedMenu zoomMenu spinMenu VIBRATIONMenu spectraMenu FRAMESanimateMenu - measureMenu pickingMenu - showConsole JSConsole showMenu computationMenu - languageComputedMenu aboutMenu"]), Clazz_newArray (-1, ["fileMenu", "loadMenu saveMenu exportMenu SIGNEDJAVAcaptureMenuSPECIAL "]), Clazz_newArray (-1, ["loadMenu", "SIGNEDloadFile SIGNEDloadUrl SIGNEDloadPdb SIGNEDloadScript - reload SIGNEDloadFileUnitCell"]), Clazz_newArray (-1, ["saveMenu", "writeFileTextVARIABLE writeState writeHistory SIGNEDwriteJmol SIGNEDwriteIsosurface "]), Clazz_newArray (-1, ["exportMenu", "SIGNEDNOGLwriteGif SIGNEDNOGLwriteJpg SIGNEDNOGLwritePng SIGNEDNOGLwritePngJmol SIGNEDNOGLwritePovray - SIGNEDNOGLwriteVrml SIGNEDNOGLwriteX3d SIGNEDNOGLwriteSTL"]), Clazz_newArray (-1, ["selectMenuText", "hideNotSelectedCB showSelectionsCB - selectAll selectNone invertSelection - elementsComputedMenu SYMMETRYSelectComputedMenu - PDBproteinMenu PDBnucleicMenu PDBheteroMenu PDBcarboMenu PDBnoneOfTheAbove"]), Clazz_newArray (-1, ["PDBproteinMenu", "PDBaaResiduesComputedMenu - allProtein proteinBackbone proteinSideChains - polar nonpolar - positiveCharge negativeCharge noCharge"]), Clazz_newArray (-1, ["PDBcarboMenu", "PDBcarboResiduesComputedMenu - allCarbo"]), Clazz_newArray (-1, ["PDBnucleicMenu", "PDBnucleicResiduesComputedMenu - allNucleic nucleicBackbone nucleicBases - DNA RNA - atPairs auPairs gcPairs - aaStructureMenu"]), Clazz_newArray (-1, ["PDBheteroMenu", "PDBheteroComputedMenu - allHetero Solvent Water - Ligand exceptWater nonWaterSolvent"]), Clazz_newArray (-1, ["viewMenu", "best front left right top bottom back - axisX axisY axisZ - axisA axisB axisC"]), Clazz_newArray (-1, ["renderMenu", "renderSchemeMenu - atomMenu labelMenu bondMenu hbondMenu ssbondMenu - PDBstructureMenu - [set_axes]Menu [set_boundbox]Menu [set_UNITCELL]Menu - perspectiveDepthCB stereoMenu"]), Clazz_newArray (-1, ["renderSchemeMenu", "renderCpkSpacefill renderBallAndStick renderSticks renderWireframe PDBrenderCartoonsOnly PDBrenderTraceOnly"]), Clazz_newArray (-1, ["atomMenu", "showHydrogensCB - atomNone - atom15 atom20 atom25 atom50 atom75 atom100"]), Clazz_newArray (-1, ["bondMenu", "bondNone bondWireframe - bond100 bond150 bond200 bond250 bond300"]), Clazz_newArray (-1, ["hbondMenu", "hbondCalc hbondNone hbondWireframe - PDBhbondSidechain PDBhbondBackbone - hbond100 hbond150 hbond200 hbond250 hbond300"]), Clazz_newArray (-1, ["ssbondMenu", "ssbondNone ssbondWireframe - PDBssbondSidechain PDBssbondBackbone - ssbond100 ssbond150 ssbond200 ssbond250 ssbond300"]), Clazz_newArray (-1, ["PDBstructureMenu", "structureNone - backbone cartoon cartoonRockets ribbons rockets strands trace"]), Clazz_newArray (-1, ["VIBRATIONvectorMenu", "vectorOff vectorOn vibScale20 vibScale05 vector3 vector005 vector01 - vectorScale02 vectorScale05 vectorScale1 vectorScale2 vectorScale5"]), Clazz_newArray (-1, ["stereoMenu", "stereoNone stereoRedCyan stereoRedBlue stereoRedGreen stereoCrossEyed stereoWallEyed"]), Clazz_newArray (-1, ["labelMenu", "labelNone - labelSymbol labelName labelNumber - labelPositionMenu"]), Clazz_newArray (-1, ["labelPositionMenu", "labelCentered labelUpperRight labelLowerRight labelUpperLeft labelLowerLeft"]), Clazz_newArray (-1, ["colorMenu", "colorrasmolCB [color_]schemeMenu - [color_atoms]Menu [color_bonds]Menu [color_hbonds]Menu [color_ssbonds]Menu colorPDBStructuresMenu [color_isosurface]Menu - [color_labels]Menu [color_vectors]Menu - [color_axes]Menu [color_boundbox]Menu [color_UNITCELL]Menu [color_background]Menu"]), Clazz_newArray (-1, ["[color_atoms]Menu", "schemeMenu - @COLOR - opaque translucent"]), Clazz_newArray (-1, ["[color_bonds]Menu", "none - @COLOR - opaque translucent"]), Clazz_newArray (-1, ["[color_hbonds]Menu", null]), Clazz_newArray (-1, ["[color_ssbonds]Menu", null]), Clazz_newArray (-1, ["[color_labels]Menu", null]), Clazz_newArray (-1, ["[color_vectors]Menu", null]), Clazz_newArray (-1, ["[color_backbone]Menu", "none - schemeMenu - @COLOR - opaque translucent"]), Clazz_newArray (-1, ["[color_cartoon]sMenu", null]), Clazz_newArray (-1, ["[color_ribbon]sMenu", null]), Clazz_newArray (-1, ["[color_rockets]Menu", null]), Clazz_newArray (-1, ["[color_strands]Menu", null]), Clazz_newArray (-1, ["[color_trace]Menu", null]), Clazz_newArray (-1, ["[color_background]Menu", "@COLOR"]), Clazz_newArray (-1, ["[color_isosurface]Menu", "@COLOR - opaque translucent"]), Clazz_newArray (-1, ["[color_axes]Menu", "@AXESCOLOR"]), Clazz_newArray (-1, ["[color_boundbox]Menu", null]), Clazz_newArray (-1, ["[color_UNITCELL]Menu", null]), Clazz_newArray (-1, ["colorPDBStructuresMenu", "[color_backbone]Menu [color_cartoon]sMenu [color_ribbon]sMenu [color_rockets]Menu [color_strands]Menu [color_trace]Menu"]), Clazz_newArray (-1, ["schemeMenu", "cpk molecule formalcharge partialcharge - altloc#PDB amino#PDB chain#PDB group#PDB monomer#PDB shapely#PDB structure#PDB relativeTemperature#BFACTORS fixedTemperature#BFACTORS property_vxyz#VIBRATION"]), Clazz_newArray (-1, ["[color_]schemeMenu", null]), Clazz_newArray (-1, ["zoomMenu", "zoom50 zoom100 zoom150 zoom200 zoom400 zoom800 - zoomIn zoomOut"]), Clazz_newArray (-1, ["spinMenu", "spinOn spinOff - [set_spin_X]Menu [set_spin_Y]Menu [set_spin_Z]Menu - [set_spin_FPS]Menu"]), Clazz_newArray (-1, ["VIBRATIONMenu", "vibrationOff vibrationOn vibration20 vibration05 VIBRATIONvectorMenu"]), Clazz_newArray (-1, ["spectraMenu", "hnmrMenu cnmrMenu"]), Clazz_newArray (-1, ["FRAMESanimateMenu", "animModeMenu - play pause resume stop - nextframe prevframe rewind - playrev restart - FRAMESanimFpsMenu"]), Clazz_newArray (-1, ["FRAMESanimFpsMenu", "animfps5 animfps10 animfps20 animfps30 animfps50"]), Clazz_newArray (-1, ["measureMenu", "showMeasurementsCB - measureOff measureDistance measureAngle measureTorsion PDBmeasureSequence - measureDelete measureList - distanceNanometers distanceAngstroms distancePicometers"]), Clazz_newArray (-1, ["pickingMenu", "pickOff pickCenter pickIdent pickLabel pickAtom pickMolecule pickElement - pickSpin - modelKitMode - PDBpickChain PDBpickGroup SYMMETRYpickSite"]), Clazz_newArray (-1, ["computationMenu", "minimize modelkit"]), Clazz_newArray (-1, ["showMenu", "showHistory showFile showFileHeader - showOrient showMeasure - showSpacegroup showState SYMMETRYshowSymmetry UNITCELLshow - showIsosurface showMo - extractMOL"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureMenuSPECIAL", "SIGNEDJAVAcaptureRock SIGNEDJAVAcaptureSpin - SIGNEDJAVAcaptureBegin SIGNEDJAVAcaptureEnd SIGNEDJAVAcaptureOff SIGNEDJAVAcaptureOn SIGNEDJAVAcaptureFpsSPECIAL SIGNEDJAVAcaptureLoopingSPECIAL"]), Clazz_newArray (-1, ["[set_spin_X]Menu", "s0 s5 s10 s20 s30 s40 s50"]), Clazz_newArray (-1, ["[set_spin_Y]Menu", null]), Clazz_newArray (-1, ["[set_spin_Z]Menu", null]), Clazz_newArray (-1, ["[set_spin_FPS]Menu", null]), Clazz_newArray (-1, ["animModeMenu", "onceThrough palindrome loop"]), Clazz_newArray (-1, ["surfaceMenu", "surfDots surfVDW surfSolventAccessible14 surfSolvent14 surfMolecular surf2MEP surfMEP surfMoComputedMenuText - surfOpaque surfTranslucent surfOff"]), Clazz_newArray (-1, ["FILEUNITMenu", "SYMMETRYShowComputedMenu FILEMOLload FILEUNITone FILEUNITnine FILEUNITnineRestricted FILEUNITninePoly"]), Clazz_newArray (-1, ["[set_axes]Menu", "on off#axes dotted - byPixelMenu byAngstromMenu"]), Clazz_newArray (-1, ["[set_boundbox]Menu", null]), Clazz_newArray (-1, ["[set_UNITCELL]Menu", null]), Clazz_newArray (-1, ["byPixelMenu", "1p 3p 5p 10p"]), Clazz_newArray (-1, ["byAngstromMenu", "10a 20a 25a 50a 100a"]), Clazz_newArray (-1, ["aboutMenu", "jmolMenu systemMenu"]), Clazz_newArray (-1, ["jmolMenu", "APPLETid version date - help - mouse translations jmolorg"]), Clazz_newArray (-1, ["systemMenu", "os javaVender javaVersion JAVAprocessors JAVAmemMax JAVAmemTotal"])]);
|
| c$.structureContents = c$.prototype.structureContents = Clazz_newArray (-1, [ Clazz_newArray (-1, ["jmolorg", "show url \"http://www.jmol.org\""]), Clazz_newArray (-1, ["help", "help"]), Clazz_newArray (-1, ["mouse", "show url \"http://wiki.jmol.org/index.php/Mouse_Manual\""]), Clazz_newArray (-1, ["translations", "show url \"http://wiki.jmol.org/index.php/Internationalisation\""]), Clazz_newArray (-1, ["colorrasmolCB", ""]), Clazz_newArray (-1, ["hideNotSelectedCB", "set hideNotSelected true | set hideNotSelected false; hide(none)"]), Clazz_newArray (-1, ["perspectiveDepthCB", ""]), Clazz_newArray (-1, ["showAxesCB", "set showAxes true | set showAxes false;set axesMolecular"]), Clazz_newArray (-1, ["showBoundBoxCB", ""]), Clazz_newArray (-1, ["showHydrogensCB", ""]), Clazz_newArray (-1, ["showMeasurementsCB", ""]), Clazz_newArray (-1, ["showSelectionsCB", ""]), Clazz_newArray (-1, ["showUNITCELLCB", ""]), Clazz_newArray (-1, ["selectAll", "SELECT all"]), Clazz_newArray (-1, ["selectNone", "SELECT none"]), Clazz_newArray (-1, ["invertSelection", "SELECT not selected"]), Clazz_newArray (-1, ["allProtein", "SELECT protein"]), Clazz_newArray (-1, ["proteinBackbone", "SELECT protein and backbone"]), Clazz_newArray (-1, ["proteinSideChains", "SELECT protein and not backbone"]), Clazz_newArray (-1, ["polar", "SELECT protein and polar"]), Clazz_newArray (-1, ["nonpolar", "SELECT protein and not polar"]), Clazz_newArray (-1, ["positiveCharge", "SELECT protein and basic"]), Clazz_newArray (-1, ["negativeCharge", "SELECT protein and acidic"]), Clazz_newArray (-1, ["noCharge", "SELECT protein and not (acidic,basic)"]), Clazz_newArray (-1, ["allCarbo", "SELECT carbohydrate"]), Clazz_newArray (-1, ["allNucleic", "SELECT nucleic"]), Clazz_newArray (-1, ["DNA", "SELECT dna"]), Clazz_newArray (-1, ["RNA", "SELECT rna"]), Clazz_newArray (-1, ["nucleicBackbone", "SELECT nucleic and backbone"]), Clazz_newArray (-1, ["nucleicBases", "SELECT nucleic and not backbone"]), Clazz_newArray (-1, ["atPairs", "SELECT a,t"]), Clazz_newArray (-1, ["gcPairs", "SELECT g,c"]), Clazz_newArray (-1, ["auPairs", "SELECT a,u"]), Clazz_newArray (-1, ["A", "SELECT a"]), Clazz_newArray (-1, ["C", "SELECT c"]), Clazz_newArray (-1, ["G", "SELECT g"]), Clazz_newArray (-1, ["T", "SELECT t"]), Clazz_newArray (-1, ["U", "SELECT u"]), Clazz_newArray (-1, ["allHetero", "SELECT hetero"]), Clazz_newArray (-1, ["Solvent", "SELECT solvent"]), Clazz_newArray (-1, ["Water", "SELECT water"]), Clazz_newArray (-1, ["nonWaterSolvent", "SELECT solvent and not water"]), Clazz_newArray (-1, ["exceptWater", "SELECT hetero and not water"]), Clazz_newArray (-1, ["Ligand", "SELECT ligand"]), Clazz_newArray (-1, ["PDBnoneOfTheAbove", "SELECT not(hetero,protein,nucleic,carbohydrate)"]), Clazz_newArray (-1, ["best", "rotate best -1.0"]), Clazz_newArray (-1, ["front", J.popup.MainPopupResourceBundle.Box ("moveto 2.0 front;delay 1")]), Clazz_newArray (-1, ["left", J.popup.MainPopupResourceBundle.Box ("moveto 1.0 front;moveto 2.0 left;delay 1")]), Clazz_newArray (-1, ["right", J.popup.MainPopupResourceBundle.Box ("moveto 1.0 front;moveto 2.0 right;delay 1")]), Clazz_newArray (-1, ["top", J.popup.MainPopupResourceBundle.Box ("moveto 1.0 front;moveto 2.0 top;delay 1")]), Clazz_newArray (-1, ["bottom", J.popup.MainPopupResourceBundle.Box ("moveto 1.0 front;moveto 2.0 bottom;delay 1")]), Clazz_newArray (-1, ["back", J.popup.MainPopupResourceBundle.Box ("moveto 1.0 front;moveto 2.0 back;delay 1")]), Clazz_newArray (-1, ["axisA", "moveto axis a"]), Clazz_newArray (-1, ["axisB", "moveto axis b"]), Clazz_newArray (-1, ["axisC", "moveto axis c"]), Clazz_newArray (-1, ["axisX", "moveto axis x"]), Clazz_newArray (-1, ["axisY", "moveto axis y"]), Clazz_newArray (-1, ["axisZ", "moveto axis z"]), Clazz_newArray (-1, ["renderCpkSpacefill", "restrict bonds not selected;select not selected;spacefill 100%;color cpk"]), Clazz_newArray (-1, ["renderBallAndStick", "restrict bonds not selected;select not selected;spacefill 23%AUTO;wireframe 0.15;color cpk"]), Clazz_newArray (-1, ["renderSticks", "restrict bonds not selected;select not selected;wireframe 0.3;color cpk"]), Clazz_newArray (-1, ["renderWireframe", "restrict bonds not selected;select not selected;wireframe on;color cpk"]), Clazz_newArray (-1, ["PDBrenderCartoonsOnly", "restrict bonds not selected;select not selected;cartoons on;color structure"]), Clazz_newArray (-1, ["PDBrenderTraceOnly", "restrict bonds not selected;select not selected;trace on;color structure"]), Clazz_newArray (-1, ["atomNone", "cpk off"]), Clazz_newArray (-1, ["atom15", "cpk 15%"]), Clazz_newArray (-1, ["atom20", "cpk 20%"]), Clazz_newArray (-1, ["atom25", "cpk 25%"]), Clazz_newArray (-1, ["atom50", "cpk 50%"]), Clazz_newArray (-1, ["atom75", "cpk 75%"]), Clazz_newArray (-1, ["atom100", "cpk on"]), Clazz_newArray (-1, ["bondNone", "wireframe off"]), Clazz_newArray (-1, ["bondWireframe", "wireframe on"]), Clazz_newArray (-1, ["bond100", "wireframe .1"]), Clazz_newArray (-1, ["bond150", "wireframe .15"]), Clazz_newArray (-1, ["bond200", "wireframe .2"]), Clazz_newArray (-1, ["bond250", "wireframe .25"]), Clazz_newArray (-1, ["bond300", "wireframe .3"]), Clazz_newArray (-1, ["hbondCalc", "hbonds calculate"]), Clazz_newArray (-1, ["hbondNone", "hbonds off"]), Clazz_newArray (-1, ["hbondWireframe", "hbonds on"]), Clazz_newArray (-1, ["PDBhbondSidechain", "set hbonds sidechain"]), Clazz_newArray (-1, ["PDBhbondBackbone", "set hbonds backbone"]), Clazz_newArray (-1, ["hbond100", "hbonds .1"]), Clazz_newArray (-1, ["hbond150", "hbonds .15"]), Clazz_newArray (-1, ["hbond200", "hbonds .2"]), Clazz_newArray (-1, ["hbond250", "hbonds .25"]), Clazz_newArray (-1, ["hbond300", "hbonds .3"]), Clazz_newArray (-1, ["ssbondNone", "ssbonds off"]), Clazz_newArray (-1, ["ssbondWireframe", "ssbonds on"]), Clazz_newArray (-1, ["PDBssbondSidechain", "set ssbonds sidechain"]), Clazz_newArray (-1, ["PDBssbondBackbone", "set ssbonds backbone"]), Clazz_newArray (-1, ["ssbond100", "ssbonds .1"]), Clazz_newArray (-1, ["ssbond150", "ssbonds .15"]), Clazz_newArray (-1, ["ssbond200", "ssbonds .2"]), Clazz_newArray (-1, ["ssbond250", "ssbonds .25"]), Clazz_newArray (-1, ["ssbond300", "ssbonds .3"]), Clazz_newArray (-1, ["structureNone", "backbone off;cartoons off;ribbons off;rockets off;strands off;trace off;"]), Clazz_newArray (-1, ["backbone", "restrict not selected;select not selected;backbone 0.3"]), Clazz_newArray (-1, ["cartoon", "restrict not selected;select not selected;set cartoonRockets false;cartoons on"]), Clazz_newArray (-1, ["cartoonRockets", "restrict not selected;select not selected;set cartoonRockets;cartoons on"]), Clazz_newArray (-1, ["ribbons", "restrict not selected;select not selected;ribbons on"]), Clazz_newArray (-1, ["rockets", "restrict not selected;select not selected;rockets on"]), Clazz_newArray (-1, ["strands", "restrict not selected;select not selected;strands on"]), Clazz_newArray (-1, ["trace", "restrict not selected;select not selected;trace 0.3"]), Clazz_newArray (-1, ["vibrationOff", "vibration off"]), Clazz_newArray (-1, ["vibrationOn", "vibration on"]), Clazz_newArray (-1, ["vibration20", "vibrationScale *= 2"]), Clazz_newArray (-1, ["vibration05", "vibrationScale /= 2"]), Clazz_newArray (-1, ["vectorOff", "vectors off"]), Clazz_newArray (-1, ["vectorOn", "vectors on"]), Clazz_newArray (-1, ["vector3", "vectors 3"]), Clazz_newArray (-1, ["vector005", "vectors 0.05"]), Clazz_newArray (-1, ["vector01", "vectors 0.1"]), Clazz_newArray (-1, ["vectorScale02", "vector scale 0.2"]), Clazz_newArray (-1, ["vectorScale05", "vector scale 0.5"]), Clazz_newArray (-1, ["vectorScale1", "vector scale 1"]), Clazz_newArray (-1, ["vectorScale2", "vector scale 2"]), Clazz_newArray (-1, ["vectorScale5", "vector scale 5"]), Clazz_newArray (-1, ["stereoNone", "stereo off"]), Clazz_newArray (-1, ["stereoRedCyan", "stereo redcyan 3"]), Clazz_newArray (-1, ["stereoRedBlue", "stereo redblue 3"]), Clazz_newArray (-1, ["stereoRedGreen", "stereo redgreen 3"]), Clazz_newArray (-1, ["stereoCrossEyed", "stereo -5"]), Clazz_newArray (-1, ["stereoWallEyed", "stereo 5"]), Clazz_newArray (-1, ["labelNone", "label off"]), Clazz_newArray (-1, ["labelSymbol", "label %e"]), Clazz_newArray (-1, ["labelName", "label %a"]), Clazz_newArray (-1, ["labelNumber", "label %i"]), Clazz_newArray (-1, ["labelCentered", "set labeloffset 0 0"]), Clazz_newArray (-1, ["labelUpperRight", "set labeloffset 4 4"]), Clazz_newArray (-1, ["labelLowerRight", "set labeloffset 4 -4"]), Clazz_newArray (-1, ["labelUpperLeft", "set labeloffset -4 4"]), Clazz_newArray (-1, ["labelLowerLeft", "set labeloffset -4 -4"]), Clazz_newArray (-1, ["zoom50", "zoom 50"]), Clazz_newArray (-1, ["zoom100", "zoom 100"]), Clazz_newArray (-1, ["zoom150", "zoom 150"]), Clazz_newArray (-1, ["zoom200", "zoom 200"]), Clazz_newArray (-1, ["zoom400", "zoom 400"]), Clazz_newArray (-1, ["zoom800", "zoom 800"]), Clazz_newArray (-1, ["zoomIn", "move 0 0 0 40 0 0 0 0 1"]), Clazz_newArray (-1, ["zoomOut", "move 0 0 0 -40 0 0 0 0 1"]), Clazz_newArray (-1, ["spinOn", "spin on"]), Clazz_newArray (-1, ["spinOff", "spin off"]), Clazz_newArray (-1, ["s0", "0"]), Clazz_newArray (-1, ["s5", "5"]), Clazz_newArray (-1, ["s10", "10"]), Clazz_newArray (-1, ["s20", "20"]), Clazz_newArray (-1, ["s30", "30"]), Clazz_newArray (-1, ["s40", "40"]), Clazz_newArray (-1, ["s50", "50"]), Clazz_newArray (-1, ["onceThrough", "anim mode once#"]), Clazz_newArray (-1, ["palindrome", "anim mode palindrome#"]), Clazz_newArray (-1, ["loop", "anim mode loop#"]), Clazz_newArray (-1, ["play", "anim play#"]), Clazz_newArray (-1, ["pause", "anim pause#"]), Clazz_newArray (-1, ["resume", "anim resume#"]), Clazz_newArray (-1, ["stop", "anim off#"]), Clazz_newArray (-1, ["nextframe", "frame next#"]), Clazz_newArray (-1, ["prevframe", "frame prev#"]), Clazz_newArray (-1, ["playrev", "anim playrev#"]), Clazz_newArray (-1, ["rewind", "anim rewind#"]), Clazz_newArray (-1, ["restart", "anim on#"]), Clazz_newArray (-1, ["animfps5", "anim fps 5#"]), Clazz_newArray (-1, ["animfps10", "anim fps 10#"]), Clazz_newArray (-1, ["animfps20", "anim fps 20#"]), Clazz_newArray (-1, ["animfps30", "anim fps 30#"]), Clazz_newArray (-1, ["animfps50", "anim fps 50#"]), Clazz_newArray (-1, ["measureOff", "set pickingstyle MEASURE OFF; set picking OFF"]), Clazz_newArray (-1, ["measureDistance", "set pickingstyle MEASURE; set picking MEASURE DISTANCE"]), Clazz_newArray (-1, ["measureAngle", "set pickingstyle MEASURE; set picking MEASURE ANGLE"]), Clazz_newArray (-1, ["measureTorsion", "set pickingstyle MEASURE; set picking MEASURE TORSION"]), Clazz_newArray (-1, ["PDBmeasureSequence", "set pickingstyle MEASURE; set picking MEASURE SEQUENCE"]), Clazz_newArray (-1, ["measureDelete", "measure delete"]), Clazz_newArray (-1, ["measureList", "console on;show measurements"]), Clazz_newArray (-1, ["distanceNanometers", "select *; set measure nanometers"]), Clazz_newArray (-1, ["distanceAngstroms", "select *; set measure angstroms"]), Clazz_newArray (-1, ["distancePicometers", "select *; set measure picometers"]), Clazz_newArray (-1, ["pickOff", "set picking off"]), Clazz_newArray (-1, ["pickCenter", "set picking center"]), Clazz_newArray (-1, ["pickIdent", "set picking ident"]), Clazz_newArray (-1, ["pickLabel", "set picking label"]), Clazz_newArray (-1, ["pickAtom", "set picking atom"]), Clazz_newArray (-1, ["PDBpickChain", "set picking chain"]), Clazz_newArray (-1, ["pickElement", "set picking element"]), Clazz_newArray (-1, ["modelKitMode", "set modelKitMode"]), Clazz_newArray (-1, ["PDBpickGroup", "set picking group"]), Clazz_newArray (-1, ["pickMolecule", "set picking molecule"]), Clazz_newArray (-1, ["SYMMETRYpickSite", "set picking site"]), Clazz_newArray (-1, ["pickSpin", "set picking spin"]), Clazz_newArray (-1, ["SYMMETRYpickSymmetry", "set picking symmetry"]), Clazz_newArray (-1, ["showConsole", "console"]), Clazz_newArray (-1, ["JSConsole", "JSCONSOLE"]), Clazz_newArray (-1, ["showFile", "console on;show file"]), Clazz_newArray (-1, ["showFileHeader", "console on;getProperty FileHeader"]), Clazz_newArray (-1, ["showHistory", "console on;show history"]), Clazz_newArray (-1, ["showIsosurface", "console on;show isosurface"]), Clazz_newArray (-1, ["showMeasure", "console on;show measure"]), Clazz_newArray (-1, ["showMo", "console on;show mo"]), Clazz_newArray (-1, ["showModel", "console on;show model"]), Clazz_newArray (-1, ["showOrient", "console on;show orientation"]), Clazz_newArray (-1, ["showSpacegroup", "console on;show spacegroup"]), Clazz_newArray (-1, ["showState", "console on;show state"]), Clazz_newArray (-1, ["reload", "load \"\""]), Clazz_newArray (-1, ["SIGNEDloadPdb", "load ?PdbId?"]), Clazz_newArray (-1, ["SIGNEDloadFile", "load ?"]), Clazz_newArray (-1, ["SIGNEDloadUrl", "load http://?"]), Clazz_newArray (-1, ["SIGNEDloadFileUnitCell", "load ? {1 1 1}"]), Clazz_newArray (-1, ["SIGNEDloadScript", "script ?.spt"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureRock", "animation mode loop;capture '?Jmol.gif' rock y 10"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureSpin", "animation mode loop;capture '?Jmol.gif' spin y"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureBegin", "capture '?Jmol.gif'"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureEnd", "capture ''"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureOff", "capture off"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureOn", "capture on"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureFpsSPECIAL", "animation fps @{0+prompt('Capture replay frames per second?', animationFPS)};prompt 'animation FPS ' + animationFPS"]), Clazz_newArray (-1, ["SIGNEDJAVAcaptureLoopingSPECIAL", "animation mode @{(animationMode=='ONCE' ? 'LOOP':'ONCE')};prompt 'animation MODE ' + animationMode"]), Clazz_newArray (-1, ["writeFileTextVARIABLE", "if (_applet && !_signedApplet) { console;show file } else { write file \"?FILE?\"}"]), Clazz_newArray (-1, ["writeState", "if (_applet && !_signedApplet) { console;show state } else { write state \"?FILEROOT?.spt\"}"]), Clazz_newArray (-1, ["writeHistory", "if (_applet && !_signedApplet) { console;show history } else { write history \"?FILEROOT?.his\"}"]), Clazz_newArray (-1, ["SIGNEDwriteJmol", "write PNGJ \"?FILEROOT?.png\""]), Clazz_newArray (-1, ["SIGNEDwriteIsosurface", "write isosurface \"?FILEROOT?.jvxl\""]), Clazz_newArray (-1, ["SIGNEDNOGLwriteGif", "write image \"?FILEROOT?.gif\""]), Clazz_newArray (-1, ["SIGNEDNOGLwriteJpg", "write image \"?FILEROOT?.jpg\""]), Clazz_newArray (-1, ["SIGNEDNOGLwritePng", "write image \"?FILEROOT?.png\""]), Clazz_newArray (-1, ["SIGNEDNOGLwritePngJmol", "write PNGJ \"?FILEROOT?.png\""]), Clazz_newArray (-1, ["SIGNEDNOGLwritePovray", "write POVRAY \"?FILEROOT?.pov\""]), Clazz_newArray (-1, ["SIGNEDNOGLwriteVrml", "write VRML \"?FILEROOT?.wrl\""]), Clazz_newArray (-1, ["SIGNEDNOGLwriteX3d", "write X3D \"?FILEROOT?.x3d\""]), Clazz_newArray (-1, ["SIGNEDNOGLwriteSTL", "write STL \"?FILEROOT?.stl\""]), Clazz_newArray (-1, ["SIGNEDNOGLwriteIdtf", "write IDTF \"?FILEROOT?.idtf\""]), Clazz_newArray (-1, ["SIGNEDNOGLwriteMaya", "write MAYA \"?FILEROOT?.ma\""]), Clazz_newArray (-1, ["SYMMETRYshowSymmetry", "console on;show symmetry"]), Clazz_newArray (-1, ["UNITCELLshow", "console on;show unitcell"]), Clazz_newArray (-1, ["extractMOL", "console on;getproperty extractModel \"visible\" "]), Clazz_newArray (-1, ["minimize", "minimize"]), Clazz_newArray (-1, ["modelkit", "set modelkitmode"]), Clazz_newArray (-1, ["surfDots", "dots on"]), Clazz_newArray (-1, ["surfVDW", "isosurface delete resolution 0 solvent 0 translucent"]), Clazz_newArray (-1, ["surfMolecular", "isosurface delete resolution 0 molecular translucent"]), Clazz_newArray (-1, ["surfSolvent14", "isosurface delete resolution 0 solvent 1.4 translucent"]), Clazz_newArray (-1, ["surfSolventAccessible14", "isosurface delete resolution 0 sasurface 1.4 translucent"]), Clazz_newArray (-1, ["surfMEP", "isosurface delete resolution 0 vdw color range all map MEP translucent"]), Clazz_newArray (-1, ["surf2MEP", "isosurface delete resolution 0 vdw color range -0.1 0.1 map MEP translucent"]), Clazz_newArray (-1, ["surfOpaque", "mo opaque;isosurface opaque"]), Clazz_newArray (-1, ["surfTranslucent", "mo translucent;isosurface translucent"]), Clazz_newArray (-1, ["surfOff", "mo delete;isosurface delete;var ~~sel = {selected};select *;dots off;select ~~sel"]), Clazz_newArray (-1, ["FILEMOLload", "save orientation;load \"\";restore orientation;center"]), Clazz_newArray (-1, ["FILEUNITone", "save orientation;load \"\" {1 1 1} ;restore orientation;center"]), Clazz_newArray (-1, ["FILEUNITnine", "save orientation;load \"\" {444 666 1} ;restore orientation;center"]), Clazz_newArray (-1, ["FILEUNITnineRestricted", "save orientation;load \"\" {444 666 1} ;restore orientation; unitcell on; display cell=555;center visible;zoom 200"]), Clazz_newArray (-1, ["FILEUNITninePoly", "save orientation;load \"\" {444 666 1} ;restore orientation; unitcell on; display cell=555; polyhedra 4,6 (displayed);center (visible);zoom 200"]), Clazz_newArray (-1, ["1p", "on"]), Clazz_newArray (-1, ["3p", "3"]), Clazz_newArray (-1, ["5p", "5"]), Clazz_newArray (-1, ["10p", "10"]), Clazz_newArray (-1, ["10a", "0.1"]), Clazz_newArray (-1, ["20a", "0.20"]), Clazz_newArray (-1, ["25a", "0.25"]), Clazz_newArray (-1, ["50a", "0.50"]), Clazz_newArray (-1, ["100a", "1.0"])]);
|
| });
|
| Clazz_declarePackage ("J.popup");
|
| Clazz_load (["J.popup.GenericSwingPopup", "java.util.Properties", "JU.Lst"], "J.popup.JmolGenericPopup", ["java.lang.Boolean", "java.util.Arrays", "$.Hashtable", "JU.PT", "J.i18n.GT", "JM.Group", "J.popup.MainPopupResourceBundle", "JU.Elements", "JV.Viewer"], function () {
|
| c$ = Clazz_decorateAsClass (function () {
|
| this.vwr = null;
|
| this.updateMode = 0;
|
| this.menuText = null;
|
| this.frankPopup = null;
|
| this.nFrankList = 0;
|
| this.itemMax = 25;
|
| this.titleWidthMax = 20;
|
| this.nullModelSetName = null;
|
| this.modelSetName = null;
|
| this.modelSetFileName = null;
|
| this.modelSetRoot = null;
|
| this.currentFrankId = null;
|
| this.configurationSelected = "";
|
| this.altlocs = null;
|
| this.frankList = null;
|
| this.modelSetInfo = null;
|
| this.modelInfo = null;
|
| this.NotPDB = null;
|
| this.PDBOnly = null;
|
| this.FileUnitOnly = null;
|
| this.FileMolOnly = null;
|
| this.UnitcellOnly = null;
|
| this.SingleModelOnly = null;
|
| this.FramesOnly = null;
|
| this.VibrationOnly = null;
|
| this.Special = null;
|
| this.SymmetryOnly = null;
|
| this.ChargesOnly = null;
|
| this.TemperatureOnly = null;
|
| this.fileHasUnitCell = false;
|
| this.haveBFactors = false;
|
| this.haveCharges = false;
|
| this.isLastFrame = false;
|
| this.isMultiConfiguration = false;
|
| this.isMultiFrame = false;
|
| this.isPDB = false;
|
| this.hasSymmetry = false;
|
| this.isUnitCell = false;
|
| this.isVibration = false;
|
| this.isZapped = false;
|
| this.modelIndex = 0;
|
| this.modelCount = 0;
|
| this.ac = 0;
|
| this.group3List = null;
|
| this.group3Counts = null;
|
| this.cnmrPeaks = null;
|
| this.hnmrPeaks = null;
|
| this.noZapped = null;
|
| Clazz_instantialize (this, arguments);
|
| }, J.popup, "JmolGenericPopup", J.popup.GenericSwingPopup);
|
| Clazz_prepareFields (c$, function () {
|
| this.menuText = new java.util.Properties ();
|
| this.frankList = new Array (10);
|
| this.NotPDB = new JU.Lst ();
|
| this.PDBOnly = new JU.Lst ();
|
| this.FileUnitOnly = new JU.Lst ();
|
| this.FileMolOnly = new JU.Lst ();
|
| this.UnitcellOnly = new JU.Lst ();
|
| this.SingleModelOnly = new JU.Lst ();
|
| this.FramesOnly = new JU.Lst ();
|
| this.VibrationOnly = new JU.Lst ();
|
| this.Special = new JU.Lst ();
|
| this.SymmetryOnly = new JU.Lst ();
|
| this.ChargesOnly = new JU.Lst ();
|
| this.TemperatureOnly = new JU.Lst ();
|
| this.noZapped = Clazz_newArray (-1, ["surfaceMenu", "measureMenu", "pickingMenu", "computationMenu", "SIGNEDJAVAcaptureMenuSPECIAL"]);
|
| });
|
| Clazz_defineMethod (c$, "initialize",
|
| function (vwr, bundle, title) {
|
| this.vwr = vwr;
|
| this.initSwing (title, bundle, vwr.html5Applet, JV.Viewer.isJS, vwr.getBooleanProperty ("_signedApplet"), JV.Viewer.isWebGL);
|
| }, "JV.Viewer,J.popup.PopupResource,~S");
|
| Clazz_overrideMethod (c$, "jpiDispose",
|
| function () {
|
| this.helper.menuClearListeners (this.popupMenu);
|
| this.helper.menuClearListeners (this.frankPopup);
|
| this.popupMenu = this.frankPopup = this.thisPopup = null;
|
| });
|
| Clazz_overrideMethod (c$, "jpiGetMenuAsObject",
|
| function () {
|
| return this.popupMenu;
|
| });
|
| Clazz_overrideMethod (c$, "jpiShow",
|
| function (x, y) {
|
| if (!this.vwr.haveDisplay) return;
|
| this.show (x, y, false);
|
| if (x < 0) {
|
| this.getViewerData ();
|
| this.setFrankMenu (this.currentMenuItemId);
|
| this.thisx = -x - 50;
|
| if (this.nFrankList > 1) {
|
| this.thisy = y - this.nFrankList * 20;
|
| this.menuShowPopup (this.frankPopup, this.thisx, this.thisy);
|
| return;
|
| }}this.appRestorePopupMenu ();
|
| this.menuShowPopup (this.popupMenu, this.thisx, this.thisy);
|
| }, "~N,~N");
|
| Clazz_overrideMethod (c$, "jpiUpdateComputedMenus",
|
| function () {
|
| if (this.updateMode == -1) return;
|
| this.isTainted = true;
|
| this.updateMode = 0;
|
| this.getViewerData ();
|
| this.updateSelectMenu ();
|
| this.updateFileMenu ();
|
| this.updateElementsComputedMenu (this.vwr.getElementsPresentBitSet (this.modelIndex));
|
| this.updateHeteroComputedMenu (this.vwr.ms.getHeteroList (this.modelIndex));
|
| this.updateSurfMoComputedMenu (this.modelInfo.get ("moData"));
|
| this.updateFileTypeDependentMenus ();
|
| this.updatePDBComputedMenus ();
|
| this.updateMode = 1;
|
| this.updateConfigurationComputedMenu ();
|
| this.updateSYMMETRYComputedMenus ();
|
| this.updateFRAMESbyModelComputedMenu ();
|
| this.updateModelSetComputedMenu ();
|
| this.updateLanguageSubmenu ();
|
| this.updateAboutSubmenu ();
|
| });
|
| Clazz_overrideMethod (c$, "appCheckItem",
|
| function (item, newMenu) {
|
| if (item.indexOf ("!PDB") >= 0) {
|
| this.NotPDB.addLast (newMenu);
|
| } else if (item.indexOf ("PDB") >= 0) {
|
| this.PDBOnly.addLast (newMenu);
|
| }if (item.indexOf ("CHARGE") >= 0) {
|
| this.ChargesOnly.addLast (newMenu);
|
| } else if (item.indexOf ("BFACTORS") >= 0) {
|
| this.TemperatureOnly.addLast (newMenu);
|
| } else if (item.indexOf ("UNITCELL") >= 0) {
|
| this.UnitcellOnly.addLast (newMenu);
|
| } else if (item.indexOf ("FILEUNIT") >= 0) {
|
| this.FileUnitOnly.addLast (newMenu);
|
| } else if (item.indexOf ("FILEMOL") >= 0) {
|
| this.FileMolOnly.addLast (newMenu);
|
| }if (item.indexOf ("!FRAMES") >= 0) {
|
| this.SingleModelOnly.addLast (newMenu);
|
| } else if (item.indexOf ("FRAMES") >= 0) {
|
| this.FramesOnly.addLast (newMenu);
|
| }if (item.indexOf ("VIBRATION") >= 0) {
|
| this.VibrationOnly.addLast (newMenu);
|
| } else if (item.indexOf ("SYMMETRY") >= 0) {
|
| this.SymmetryOnly.addLast (newMenu);
|
| }if (item.indexOf ("SPECIAL") >= 0) this.Special.addLast (newMenu);
|
| }, "~S,javajs.awt.SC");
|
| Clazz_overrideMethod (c$, "appFixLabel",
|
| function (label) {
|
| return label;
|
| }, "~S");
|
| Clazz_overrideMethod (c$, "appFixScript",
|
| function (id, script) {
|
| var pt;
|
| if (script === "" || id.endsWith ("Checkbox")) return script;
|
| if (script.indexOf ("SELECT") == 0) {
|
| return "select thisModel and (" + script.substring (6) + ")";
|
| }if ((pt = id.lastIndexOf ("[")) >= 0) {
|
| id = id.substring (pt + 1);
|
| if ((pt = id.indexOf ("]")) >= 0) id = id.substring (0, pt);
|
| id = id.$replace ('_', ' ');
|
| if (script.indexOf ("[]") < 0) script = "[] " + script;
|
| script = script.$replace ('_', ' ');
|
| return JU.PT.rep (script, "[]", id);
|
| } else if (script.indexOf ("?FILEROOT?") >= 0) {
|
| script = JU.PT.rep (script, "FILEROOT?", this.modelSetRoot);
|
| } else if (script.indexOf ("?FILE?") >= 0) {
|
| script = JU.PT.rep (script, "FILE?", this.modelSetFileName);
|
| } else if (script.indexOf ("?PdbId?") >= 0) {
|
| script = JU.PT.rep (script, "PdbId?", "=xxxx");
|
| }return script;
|
| }, "~S,~S");
|
| Clazz_overrideMethod (c$, "appGetBooleanProperty",
|
| function (name) {
|
| return this.vwr.getBooleanProperty (name);
|
| }, "~S");
|
| Clazz_overrideMethod (c$, "appGetMenuAsString",
|
| function (title) {
|
| return ( new J.popup.MainPopupResourceBundle (this.strMenuStructure, null)).getMenuAsText (title);
|
| }, "~S");
|
| Clazz_overrideMethod (c$, "appIsSpecialCheckBox",
|
| function (item, basename, what, TF) {
|
| if (this.appGetBooleanProperty (basename) == TF) return true;
|
| if (!basename.endsWith ("P!")) return false;
|
| if (basename.indexOf ("??") >= 0) {
|
| what = this.menuSetCheckBoxOption (item, basename, what);
|
| } else {
|
| if (!TF) return true;
|
| what = "set picking " + basename.substring (0, basename.length - 2);
|
| }this.appRunScript (what);
|
| return true;
|
| }, "javajs.awt.SC,~S,~S,~B");
|
| Clazz_overrideMethod (c$, "appRestorePopupMenu",
|
| function () {
|
| this.thisPopup = this.popupMenu;
|
| if (JV.Viewer.isJS || this.nFrankList < 2) return;
|
| for (var i = this.nFrankList; --i > 0; ) {
|
| var f = this.frankList[i];
|
| this.helper.menuInsertSubMenu (f[0], f[1], (f[2]).intValue ());
|
| }
|
| this.nFrankList = 1;
|
| });
|
| Clazz_overrideMethod (c$, "appRunScript",
|
| function (script) {
|
| this.vwr.evalStringQuiet (script);
|
| }, "~S");
|
| Clazz_overrideMethod (c$, "appUpdateSpecialCheckBoxValue",
|
| function (item, what, TF) {
|
| if (what.indexOf ("#CONFIG") >= 0) {
|
| this.configurationSelected = what;
|
| this.updateConfigurationComputedMenu ();
|
| this.updateModelSetComputedMenu ();
|
| }}, "javajs.awt.SC,~S,~B");
|
| Clazz_defineMethod (c$, "setFrankMenu",
|
| function (id) {
|
| if (this.currentFrankId != null && this.currentFrankId === id && this.nFrankList > 0) return;
|
| if (this.frankPopup == null) this.frankPopup = this.helper.menuCreatePopup ("Frank", this.vwr.html5Applet);
|
| this.thisPopup = this.frankPopup;
|
| this.menuRemoveAll (this.frankPopup, 0);
|
| this.menuCreateItem (this.frankPopup, this.getMenuText ("mainMenuText"), "MAIN", "");
|
| this.currentFrankId = id;
|
| this.nFrankList = 0;
|
| this.frankList[this.nFrankList++] = Clazz_newArray (-1, [null, null, null]);
|
| if (id != null) for (var i = id.indexOf (".", 2) + 1; ; ) {
|
| var iNew = id.indexOf (".", i);
|
| if (iNew < 0) break;
|
| var menu = this.htMenus.get (id.substring (i, iNew));
|
| this.frankList[this.nFrankList++] = Clazz_newArray (-1, [menu.getParent (), menu, Integer.$valueOf (JV.Viewer.isJS ? 0 : this.menuGetListPosition (menu))]);
|
| this.menuAddSubMenu (this.frankPopup, menu);
|
| i = iNew + 1;
|
| }
|
| this.thisPopup = this.popupMenu;
|
| }, "~S");
|
| Clazz_defineMethod (c$, "checkBoolean",
|
| function (key) {
|
| return (this.modelSetInfo != null && this.modelSetInfo.get (key) === Boolean.TRUE);
|
| }, "~S");
|
| Clazz_defineMethod (c$, "getViewerData",
|
| function () {
|
| this.modelSetName = this.vwr.ms.modelSetName;
|
| this.modelSetFileName = this.vwr.getModelSetFileName ();
|
| var i = this.modelSetFileName.lastIndexOf (".");
|
| this.isZapped = ("zapped".equals (this.modelSetName));
|
| if (this.isZapped || "string".equals (this.modelSetFileName) || "String[]".equals (this.modelSetFileName)) this.modelSetFileName = "";
|
| this.modelSetRoot = this.modelSetFileName.substring (0, i < 0 ? this.modelSetFileName.length : i);
|
| if (this.modelSetRoot.length == 0) this.modelSetRoot = "Jmol";
|
| this.modelIndex = this.vwr.am.cmi;
|
| this.modelCount = this.vwr.ms.mc;
|
| this.ac = this.vwr.ms.getAtomCountInModel (this.modelIndex);
|
| this.modelSetInfo = this.vwr.getModelSetAuxiliaryInfo ();
|
| this.modelInfo = this.vwr.ms.getModelAuxiliaryInfo (this.modelIndex);
|
| if (this.modelInfo == null) this.modelInfo = new java.util.Hashtable ();
|
| this.isPDB = this.checkBoolean ("isPDB");
|
| this.isMultiFrame = (this.modelCount > 1);
|
| this.hasSymmetry = this.modelInfo.containsKey ("hasSymmetry");
|
| this.isUnitCell = this.modelInfo.containsKey ("unitCellParams");
|
| this.fileHasUnitCell = (this.isPDB && this.isUnitCell || this.checkBoolean ("fileHasUnitCell"));
|
| this.isLastFrame = (this.modelIndex == this.modelCount - 1);
|
| this.altlocs = this.vwr.ms.getAltLocListInModel (this.modelIndex);
|
| this.isMultiConfiguration = (this.altlocs.length > 0);
|
| this.isVibration = (this.vwr.modelHasVibrationVectors (this.modelIndex));
|
| this.haveCharges = (this.vwr.ms.getPartialCharges () != null);
|
| this.haveBFactors = (this.vwr.getBooleanProperty ("haveBFactors"));
|
| this.cnmrPeaks = this.modelInfo.get ("jdxAtomSelect_13CNMR");
|
| this.hnmrPeaks = this.modelInfo.get ("jdxAtomSelect_1HNMR");
|
| });
|
| Clazz_overrideMethod (c$, "appCheckSpecialMenu",
|
| function (item, subMenu, word) {
|
| if ("modelSetMenu".equals (item)) {
|
| this.nullModelSetName = word;
|
| this.menuEnable (subMenu, false);
|
| }}, "~S,javajs.awt.SC,~S");
|
| Clazz_overrideMethod (c$, "appUpdateForShow",
|
| function () {
|
| if (this.updateMode == -1) return;
|
| this.isTainted = true;
|
| this.getViewerData ();
|
| this.updateMode = 2;
|
| this.updateSelectMenu ();
|
| this.updateSpectraMenu ();
|
| this.updateFRAMESbyModelComputedMenu ();
|
| this.updateSceneComputedMenu ();
|
| this.updateModelSetComputedMenu ();
|
| this.updateAboutSubmenu ();
|
| for (var i = this.Special.size (); --i >= 0; ) this.updateSpecialMenuItem (this.Special.get (i));
|
|
|
| });
|
| Clazz_defineMethod (c$, "updateFileMenu",
|
| function () {
|
| var menu = this.htMenus.get ("fileMenu");
|
| if (menu == null) return;
|
| var text = this.getMenuText ("writeFileTextVARIABLE");
|
| menu = this.htMenus.get ("writeFileTextVARIABLE");
|
| var ignore = (this.modelSetFileName.equals ("zapped") || this.modelSetFileName.equals (""));
|
| if (ignore) {
|
| this.menuSetLabel (menu, "");
|
| this.menuEnable (menu, false);
|
| } else {
|
| this.menuSetLabel (menu, J.i18n.GT.o (J.i18n.GT.$ (text), this.modelSetFileName));
|
| this.menuEnable (menu, true);
|
| }});
|
| Clazz_defineMethod (c$, "getMenuText",
|
| function (key) {
|
| var str = this.menuText.getProperty (key);
|
| return (str == null ? key : str);
|
| }, "~S");
|
| Clazz_defineMethod (c$, "updateSelectMenu",
|
| function () {
|
| var menu = this.htMenus.get ("selectMenuText");
|
| if (menu == null) return;
|
| this.menuEnable (menu, this.ac != 0);
|
| this.menuSetLabel (menu, this.gti ("selectMenuText", this.vwr.slm.getSelectionCount ()));
|
| });
|
| Clazz_defineMethod (c$, "updateElementsComputedMenu",
|
| function (elementsPresentBitSet) {
|
| var menu = this.htMenus.get ("elementsComputedMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| this.menuEnable (menu, false);
|
| if (elementsPresentBitSet == null) return;
|
| for (var i = elementsPresentBitSet.nextSetBit (0); i >= 0; i = elementsPresentBitSet.nextSetBit (i + 1)) {
|
| var elementName = JU.Elements.elementNameFromNumber (i);
|
| var elementSymbol = JU.Elements.elementSymbolFromNumber (i);
|
| var entryName = elementSymbol + " - " + elementName;
|
| this.menuCreateItem (menu, entryName, "SELECT " + elementName, null);
|
| }
|
| for (var i = 4; i < JU.Elements.altElementMax; ++i) {
|
| var n = JU.Elements.elementNumberMax + i;
|
| if (elementsPresentBitSet.get (n)) {
|
| n = JU.Elements.altElementNumberFromIndex (i);
|
| var elementName = JU.Elements.elementNameFromNumber (n);
|
| var elementSymbol = JU.Elements.elementSymbolFromNumber (n);
|
| var entryName = elementSymbol + " - " + elementName;
|
| this.menuCreateItem (menu, entryName, "SELECT " + elementName, null);
|
| }}
|
| this.menuEnable (menu, true);
|
| }, "JU.BS");
|
| Clazz_defineMethod (c$, "updateSpectraMenu",
|
| function () {
|
| var menuh = this.htMenus.get ("hnmrMenu");
|
| var menuc = this.htMenus.get ("cnmrMenu");
|
| if (menuh != null) this.menuRemoveAll (menuh, 0);
|
| if (menuc != null) this.menuRemoveAll (menuc, 0);
|
| var menu = this.htMenus.get ("spectraMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| var isOK = new Boolean (this.setSpectraMenu (menuh, this.hnmrPeaks) | this.setSpectraMenu (menuc, this.cnmrPeaks)).valueOf ();
|
| if (isOK) {
|
| if (menuh != null) this.menuAddSubMenu (menu, menuh);
|
| if (menuc != null) this.menuAddSubMenu (menu, menuc);
|
| }this.menuEnable (menu, isOK);
|
| });
|
| Clazz_defineMethod (c$, "setSpectraMenu",
|
| function (menu, peaks) {
|
| if (menu == null) return false;
|
| this.menuEnable (menu, false);
|
| var n = (peaks == null ? 0 : peaks.size ());
|
| if (n == 0) return false;
|
| for (var i = 0; i < n; i++) {
|
| var peak = peaks.get (i);
|
| var title = JU.PT.getQuotedAttribute (peak, "title");
|
| var atoms = JU.PT.getQuotedAttribute (peak, "atoms");
|
| if (atoms != null) this.menuCreateItem (menu, title, "select visible & (@" + JU.PT.rep (atoms, ",", " or @") + ")", "Focus" + i);
|
| }
|
| this.menuEnable (menu, true);
|
| return true;
|
| }, "javajs.awt.SC,JU.Lst");
|
| Clazz_defineMethod (c$, "updateHeteroComputedMenu",
|
| function (htHetero) {
|
| var menu = this.htMenus.get ("PDBheteroComputedMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| this.menuEnable (menu, false);
|
| if (htHetero == null) return;
|
| var n = 0;
|
| for (var hetero, $hetero = htHetero.entrySet ().iterator (); $hetero.hasNext () && ((hetero = $hetero.next ()) || true);) {
|
| var heteroCode = hetero.getKey ();
|
| var heteroName = hetero.getValue ();
|
| if (heteroName.length > 20) heteroName = heteroName.substring (0, 20) + "...";
|
| var entryName = heteroCode + " - " + heteroName;
|
| this.menuCreateItem (menu, entryName, "SELECT [" + heteroCode + "]", null);
|
| n++;
|
| }
|
| this.menuEnable (menu, (n > 0));
|
| }, "java.util.Map");
|
| Clazz_defineMethod (c$, "updateSurfMoComputedMenu",
|
| function (moData) {
|
| var menu = this.htMenus.get ("surfMoComputedMenuText");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| var mos = (moData == null ? null : (moData.get ("mos")));
|
| var nOrb = (mos == null ? 0 : mos.size ());
|
| var text = this.getMenuText ("surfMoComputedMenuText");
|
| if (nOrb == 0) {
|
| this.menuSetLabel (menu, J.i18n.GT.o (J.i18n.GT.$ (text), ""));
|
| this.menuEnable (menu, false);
|
| return;
|
| }this.menuSetLabel (menu, J.i18n.GT.i (J.i18n.GT.$ (text), nOrb));
|
| this.menuEnable (menu, true);
|
| var subMenu = menu;
|
| var nmod = (nOrb % this.itemMax);
|
| if (nmod == 0) nmod = this.itemMax;
|
| var pt = (nOrb > this.itemMax ? 0 : -2147483648);
|
| for (var i = nOrb; --i >= 0; ) {
|
| if (pt >= 0 && (pt++ % nmod) == 0) {
|
| if (pt == nmod + 1) nmod = this.itemMax;
|
| var id = "mo" + pt + "Menu";
|
| subMenu = this.menuNewSubMenu (Math.max (i + 2 - nmod, 1) + "..." + (i + 1), this.menuGetId (menu) + "." + id);
|
| this.menuAddSubMenu (menu, subMenu);
|
| this.htMenus.put (id, subMenu);
|
| pt = 1;
|
| }var mo = mos.get (i);
|
| var entryName = "#" + (i + 1) + " " + (mo.containsKey ("type") ? mo.get ("type") + " " : "") + (mo.containsKey ("symmetry") ? mo.get ("symmetry") + " " : "") + (mo.containsKey ("occupancy") ? "(" + mo.get ("occupancy") + ") " : "") + (mo.containsKey ("energy") ? mo.get ("energy") : "");
|
| var script = "mo " + (i + 1);
|
| this.menuCreateItem (subMenu, entryName, script, null);
|
| }
|
| }, "java.util.Map");
|
| Clazz_defineMethod (c$, "updateFileTypeDependentMenus",
|
| function () {
|
| for (var i = this.NotPDB.size (); --i >= 0; ) this.menuEnable (this.NotPDB.get (i), !this.isPDB);
|
|
|
| for (var i = this.PDBOnly.size (); --i >= 0; ) this.menuEnable (this.PDBOnly.get (i), this.isPDB);
|
|
|
| for (var i = this.UnitcellOnly.size (); --i >= 0; ) this.menuEnable (this.UnitcellOnly.get (i), this.isUnitCell);
|
|
|
| for (var i = this.FileUnitOnly.size (); --i >= 0; ) this.menuEnable (this.FileUnitOnly.get (i), this.isUnitCell || this.fileHasUnitCell);
|
|
|
| for (var i = this.FileMolOnly.size (); --i >= 0; ) this.menuEnable (this.FileMolOnly.get (i), this.isUnitCell || this.fileHasUnitCell);
|
|
|
| for (var i = this.SingleModelOnly.size (); --i >= 0; ) this.menuEnable (this.SingleModelOnly.get (i), this.isLastFrame);
|
|
|
| for (var i = this.FramesOnly.size (); --i >= 0; ) this.menuEnable (this.FramesOnly.get (i), this.isMultiFrame);
|
|
|
| for (var i = this.VibrationOnly.size (); --i >= 0; ) this.menuEnable (this.VibrationOnly.get (i), this.isVibration);
|
|
|
| for (var i = this.SymmetryOnly.size (); --i >= 0; ) this.menuEnable (this.SymmetryOnly.get (i), this.hasSymmetry && this.isUnitCell);
|
|
|
| for (var i = this.ChargesOnly.size (); --i >= 0; ) this.menuEnable (this.ChargesOnly.get (i), this.haveCharges);
|
|
|
| for (var i = this.TemperatureOnly.size (); --i >= 0; ) this.menuEnable (this.TemperatureOnly.get (i), this.haveBFactors);
|
|
|
| this.updateSignedAppletItems ();
|
| });
|
| Clazz_defineMethod (c$, "updateSceneComputedMenu",
|
| function () {
|
| var menu = this.htMenus.get ("sceneComputedMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| this.menuEnable (menu, false);
|
| var scenes = this.vwr.ms.getInfoM ("scenes");
|
| if (scenes == null) return;
|
| for (var i = 0; i < scenes.length; i++) this.menuCreateItem (menu, scenes[i], "restore scene " + JU.PT.esc (scenes[i]) + " 1.0", null);
|
|
|
| this.menuEnable (menu, true);
|
| });
|
| Clazz_defineMethod (c$, "updatePDBComputedMenus",
|
| function () {
|
| var menu = this.htMenus.get ("PDBaaResiduesComputedMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| this.menuEnable (menu, false);
|
| var menu1 = this.htMenus.get ("PDBnucleicResiduesComputedMenu");
|
| if (menu1 == null) return;
|
| this.menuRemoveAll (menu1, 0);
|
| this.menuEnable (menu1, false);
|
| var menu2 = this.htMenus.get ("PDBcarboResiduesComputedMenu");
|
| if (menu2 == null) return;
|
| this.menuRemoveAll (menu2, 0);
|
| this.menuEnable (menu2, false);
|
| if (this.modelSetInfo == null) return;
|
| var n = (this.modelIndex < 0 ? 0 : this.modelIndex + 1);
|
| var lists = (this.modelSetInfo.get ("group3Lists"));
|
| this.group3List = (lists == null ? null : lists[n]);
|
| this.group3Counts = (lists == null ? null : (this.modelSetInfo.get ("group3Counts"))[n]);
|
| if (this.group3List == null) return;
|
| var nItems = 0;
|
| var groupList = JM.Group.standardGroupList;
|
| for (var i = 1; i < 24; ++i) nItems += this.updateGroup3List (menu, groupList.substring (i * 6 - 4, i * 6 - 1).trim ());
|
|
|
| nItems += this.augmentGroup3List (menu, "p>", true);
|
| this.menuEnable (menu, (nItems > 0));
|
| this.menuEnable (this.htMenus.get ("PDBproteinMenu"), (nItems > 0));
|
| nItems = this.augmentGroup3List (menu1, "n>", false);
|
| this.menuEnable (menu1, nItems > 0);
|
| this.menuEnable (this.htMenus.get ("PDBnucleicMenu"), (nItems > 0));
|
| var dssr = (nItems > 0 && this.modelIndex >= 0 ? this.vwr.ms.getInfo (this.modelIndex, "dssr") : null);
|
| if (dssr != null) this.setSecStrucMenu (this.htMenus.get ("aaStructureMenu"), dssr);
|
| nItems = this.augmentGroup3List (menu2, "c>", false);
|
| this.menuEnable (menu2, nItems > 0);
|
| this.menuEnable (this.htMenus.get ("PDBcarboMenu"), (nItems > 0));
|
| });
|
| Clazz_defineMethod (c$, "setSecStrucMenu",
|
| function (menu, dssr) {
|
| var counts = dssr.get ("counts");
|
| if (counts == null) return false;
|
| var keys = new Array (counts.size ());
|
| counts.keySet ().toArray (keys);
|
| java.util.Arrays.sort (keys);
|
| if (keys.length == 0) return false;
|
| menu.removeAll ();
|
| for (var i = 0; i < keys.length; i++) this.menuCreateItem (menu, keys[i] + " (" + counts.get (keys[i]) + ")", "select modelIndex=" + this.modelIndex + " && within('dssr', '" + keys[i] + "');", null);
|
|
|
| return true;
|
| }, "javajs.awt.SC,java.util.Map");
|
| Clazz_defineMethod (c$, "updateGroup3List",
|
| function (menu, name) {
|
| var nItems = 0;
|
| var n = this.group3Counts[Clazz_doubleToInt (this.group3List.indexOf (name) / 6)];
|
| name = name.trim ();
|
| var script = null;
|
| if (n > 0) {
|
| script = "SELECT " + name;
|
| name += " (" + n + ")";
|
| nItems++;
|
| }var item = this.menuCreateItem (menu, name, script, this.menuGetId (menu) + "." + name);
|
| if (n == 0) this.menuEnable (item, false);
|
| return nItems;
|
| }, "javajs.awt.SC,~S");
|
| Clazz_defineMethod (c$, "augmentGroup3List",
|
| function (menu, type, addSeparator) {
|
| var pt = 138;
|
| var nItems = 0;
|
| while (true) {
|
| pt = this.group3List.indexOf (type, pt);
|
| if (pt < 0) break;
|
| if (nItems++ == 0 && addSeparator) this.menuAddSeparator (menu);
|
| var n = this.group3Counts[Clazz_doubleToInt (pt / 6)];
|
| var heteroCode = this.group3List.substring (pt + 2, pt + 5);
|
| var name = heteroCode + " (" + n + ")";
|
| this.menuCreateItem (menu, name, "SELECT [" + heteroCode + "]", this.menuGetId (menu) + "." + name);
|
| pt++;
|
| }
|
| return nItems;
|
| }, "javajs.awt.SC,~S,~B");
|
| Clazz_defineMethod (c$, "updateSYMMETRYComputedMenus",
|
| function () {
|
| this.updateSYMMETRYSelectComputedMenu ();
|
| this.updateSYMMETRYShowComputedMenu ();
|
| });
|
| Clazz_defineMethod (c$, "updateSYMMETRYShowComputedMenu",
|
| function () {
|
| var menu = this.htMenus.get ("SYMMETRYShowComputedMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| this.menuEnable (menu, false);
|
| if (!this.hasSymmetry || this.modelIndex < 0) return;
|
| var info = this.vwr.getProperty ("DATA_API", "spaceGroupInfo", null);
|
| if (info == null) return;
|
| var infolist = info.get ("operations");
|
| if (infolist == null) return;
|
| var name = info.get ("spaceGroupName");
|
| this.menuSetLabel (menu, name == null ? J.i18n.GT.$ ("Space Group") : name);
|
| var subMenu = menu;
|
| var nmod = this.itemMax;
|
| var pt = (infolist.length > this.itemMax ? 0 : -2147483648);
|
| for (var i = 0; i < infolist.length; i++) {
|
| if (pt >= 0 && (pt++ % nmod) == 0) {
|
| var id = "drawsymop" + pt + "Menu";
|
| subMenu = this.menuNewSubMenu ((i + 1) + "..." + Math.min (i + this.itemMax, infolist.length), this.menuGetId (menu) + "." + id);
|
| this.menuAddSubMenu (menu, subMenu);
|
| this.htMenus.put (id, subMenu);
|
| pt = 1;
|
| }if (i == 0) this.menuEnable (this.menuCreateItem (subMenu, J.i18n.GT.$ ("none"), "draw sym_* delete", null), true);
|
| var sym = infolist[i][1];
|
| if (sym.indexOf ("x1") < 0) sym = infolist[i][0];
|
| var entryName = (i + 1) + " " + infolist[i][2] + " (" + sym + ")";
|
| this.menuEnable (this.menuCreateItem (subMenu, entryName, "draw SYMOP " + (i + 1), null), true);
|
| }
|
| this.menuEnable (menu, true);
|
| });
|
| Clazz_defineMethod (c$, "updateSYMMETRYSelectComputedMenu",
|
| function () {
|
| var menu = this.htMenus.get ("SYMMETRYSelectComputedMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| this.menuEnable (menu, false);
|
| if (!this.hasSymmetry || this.modelIndex < 0) return;
|
| var list = this.modelInfo.get ("symmetryOperations");
|
| if (list == null) return;
|
| var cellRange = this.modelInfo.get ("unitCellRange");
|
| var haveUnitCellRange = (cellRange != null);
|
| var subMenu = menu;
|
| var nmod = this.itemMax;
|
| var pt = (list.length > this.itemMax ? 0 : -2147483648);
|
| for (var i = 0; i < list.length; i++) {
|
| if (pt >= 0 && (pt++ % nmod) == 0) {
|
| var id = "symop" + pt + "Menu";
|
| subMenu = this.menuNewSubMenu ((i + 1) + "..." + Math.min (i + this.itemMax, list.length), this.menuGetId (menu) + "." + id);
|
| this.menuAddSubMenu (menu, subMenu);
|
| this.htMenus.put (id, subMenu);
|
| pt = 1;
|
| }var entryName = "symop=" + (i + 1) + " # " + list[i];
|
| this.menuEnable (this.menuCreateItem (subMenu, entryName, "SELECT symop=" + (i + 1), null), haveUnitCellRange);
|
| }
|
| this.menuEnable (menu, true);
|
| });
|
| Clazz_defineMethod (c$, "updateFRAMESbyModelComputedMenu",
|
| function () {
|
| var menu = this.htMenus.get ("FRAMESbyModelComputedMenu");
|
| if (menu == null) return;
|
| this.menuEnable (menu, (this.modelCount > 0));
|
| this.menuSetLabel (menu, (this.modelIndex < 0 ? this.gti ("allModelsText", this.modelCount) : this.gto ("modelMenuText", (this.modelIndex + 1) + "/" + this.modelCount)));
|
| this.menuRemoveAll (menu, 0);
|
| if (this.modelCount < 1) return;
|
| if (this.modelCount > 1) this.menuCreateCheckboxItem (menu, J.i18n.GT.$ ("All"), "frame 0 ##", null, (this.modelIndex < 0), false);
|
| var subMenu = menu;
|
| var nmod = this.itemMax;
|
| var pt = (this.modelCount > this.itemMax ? 0 : -2147483648);
|
| for (var i = 0; i < this.modelCount; i++) {
|
| if (pt >= 0 && (pt++ % nmod) == 0) {
|
| var id = "model" + pt + "Menu";
|
| subMenu = this.menuNewSubMenu ((i + 1) + "..." + Math.min (i + this.itemMax, this.modelCount), this.menuGetId (menu) + "." + id);
|
| this.menuAddSubMenu (menu, subMenu);
|
| this.htMenus.put (id, subMenu);
|
| pt = 1;
|
| }var script = "" + this.vwr.getModelNumberDotted (i);
|
| var entryName = this.vwr.getModelName (i);
|
| var spectrumTypes = this.vwr.ms.getInfo (i, "spectrumTypes");
|
| if (spectrumTypes != null && entryName.startsWith (spectrumTypes)) spectrumTypes = null;
|
| if (!entryName.equals (script)) {
|
| var ipt = entryName.indexOf (";PATH");
|
| if (ipt >= 0) entryName = entryName.substring (0, ipt);
|
| if (entryName.indexOf ("Model[") == 0 && (ipt = entryName.indexOf ("]:")) >= 0) entryName = entryName.substring (ipt + 2);
|
| entryName = script + ": " + entryName;
|
| }if (entryName.length > 60) entryName = entryName.substring (0, 55) + "...";
|
| if (spectrumTypes != null) entryName += " (" + spectrumTypes + ")";
|
| this.menuCreateCheckboxItem (subMenu, entryName, "model " + script + " ##", null, (this.modelIndex == i), false);
|
| }
|
| });
|
| Clazz_defineMethod (c$, "updateConfigurationComputedMenu",
|
| function () {
|
| var menu = this.htMenus.get ("configurationComputedMenu");
|
| if (menu == null) return;
|
| this.menuEnable (menu, this.isMultiConfiguration);
|
| if (!this.isMultiConfiguration) return;
|
| var nAltLocs = this.altlocs.length;
|
| this.menuSetLabel (menu, this.gti ("configurationMenuText", nAltLocs));
|
| this.menuRemoveAll (menu, 0);
|
| var script = "hide none ##CONFIG";
|
| this.menuCreateCheckboxItem (menu, J.i18n.GT.$ ("All"), script, null, (this.updateMode == 1 && this.configurationSelected.equals (script)), false);
|
| for (var i = 0; i < nAltLocs; i++) {
|
| script = "configuration " + (i + 1) + "; hide thisModel and not selected ##CONFIG";
|
| var entryName = "" + (i + 1) + " -- \"" + this.altlocs.charAt (i) + "\"";
|
| this.menuCreateCheckboxItem (menu, entryName, script, null, (this.updateMode == 1 && this.configurationSelected.equals (script)), false);
|
| }
|
| });
|
| Clazz_defineMethod (c$, "updateModelSetComputedMenu",
|
| function () {
|
| var menu = this.htMenus.get ("modelSetMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| this.menuSetLabel (menu, this.nullModelSetName);
|
| this.menuEnable (menu, false);
|
| for (var i = this.noZapped.length; --i >= 0; ) this.menuEnable (this.htMenus.get (this.noZapped[i]), !this.isZapped);
|
|
|
| if (this.modelSetName == null || this.isZapped) return;
|
| if (this.isMultiFrame) {
|
| this.modelSetName = this.gti ("modelSetCollectionText", this.modelCount);
|
| if (this.modelSetName.length > this.titleWidthMax) this.modelSetName = this.modelSetName.substring (0, this.titleWidthMax) + "...";
|
| } else if (this.vwr.getBooleanProperty ("hideNameInPopup")) {
|
| this.modelSetName = this.getMenuText ("hiddenModelSetText");
|
| } else if (this.modelSetName.length > this.titleWidthMax) {
|
| this.modelSetName = this.modelSetName.substring (0, this.titleWidthMax) + "...";
|
| }this.menuSetLabel (menu, this.modelSetName);
|
| this.menuEnable (menu, true);
|
| this.menuEnable (this.htMenus.get ("computationMenu"), this.ac <= 100);
|
| this.addMenuItem (menu, this.gti ("atomsText", this.ac));
|
| this.addMenuItem (menu, this.gti ("bondsText", this.vwr.ms.getBondCountInModel (this.modelIndex)));
|
| if (this.isPDB) {
|
| this.menuAddSeparator (menu);
|
| this.addMenuItem (menu, this.gti ("groupsText", this.vwr.ms.getGroupCountInModel (this.modelIndex)));
|
| this.addMenuItem (menu, this.gti ("chainsText", this.vwr.ms.getChainCountInModelWater (this.modelIndex, false)));
|
| this.addMenuItem (menu, this.gti ("polymersText", this.vwr.ms.getBioPolymerCountInModel (this.modelIndex)));
|
| var submenu = this.htMenus.get ("BiomoleculesMenu");
|
| if (submenu == null) {
|
| submenu = this.menuNewSubMenu (J.i18n.GT.$ (this.getMenuText ("biomoleculesMenuText")), this.menuGetId (menu) + ".biomolecules");
|
| this.menuAddSubMenu (menu, submenu);
|
| }this.menuRemoveAll (submenu, 0);
|
| this.menuEnable (submenu, false);
|
| var biomolecules;
|
| if (this.modelIndex >= 0 && (biomolecules = this.vwr.ms.getInfo (this.modelIndex, "biomolecules")) != null) {
|
| this.menuEnable (submenu, true);
|
| var nBiomolecules = biomolecules.size ();
|
| for (var i = 0; i < nBiomolecules; i++) {
|
| var script = (this.isMultiFrame ? "" : "save orientation;load \"\" FILTER \"biomolecule " + (i + 1) + "\";restore orientation;");
|
| var nAtoms = (biomolecules.get (i).get ("atomCount")).intValue ();
|
| var entryName = this.gto (this.isMultiFrame ? "biomoleculeText" : "loadBiomoleculeText", Clazz_newArray (-1, [Integer.$valueOf (i + 1), Integer.$valueOf (nAtoms)]));
|
| this.menuCreateItem (submenu, entryName, script, null);
|
| }
|
| }}if (this.isApplet && !this.vwr.getBooleanProperty ("hideNameInPopup")) {
|
| this.menuAddSeparator (menu);
|
| this.menuCreateItem (menu, this.gto ("viewMenuText", this.modelSetFileName), "show url", null);
|
| }});
|
| Clazz_defineMethod (c$, "gti",
|
| function (s, n) {
|
| return J.i18n.GT.i (J.i18n.GT.$ (this.getMenuText (s)), n);
|
| }, "~S,~N");
|
| Clazz_defineMethod (c$, "gto",
|
| function (s, o) {
|
| return J.i18n.GT.o (J.i18n.GT.$ (this.getMenuText (s)), o);
|
| }, "~S,~O");
|
| Clazz_defineMethod (c$, "updateAboutSubmenu",
|
| function () {
|
| if (this.isApplet) this.setText ("APPLETid", this.vwr.appletName);
|
| {
|
| }});
|
| Clazz_defineMethod (c$, "updateLanguageSubmenu",
|
| function () {
|
| var menu = this.htMenus.get ("languageComputedMenu");
|
| if (menu == null) return;
|
| this.menuRemoveAll (menu, 0);
|
| var language = J.i18n.GT.getLanguage ();
|
| var id = this.menuGetId (menu);
|
| var languages = J.i18n.GT.getLanguageList (null);
|
| for (var i = 0, p = 0; i < languages.length; i++) {
|
| if (language.equals (languages[i].code)) languages[i].display = true;
|
| if (languages[i].display) {
|
| var code = languages[i].code;
|
| var name = languages[i].language;
|
| var nativeName = languages[i].nativeLanguage;
|
| var menuLabel = code + " - " + J.i18n.GT.$ (name);
|
| if ((nativeName != null) && (!nativeName.equals (J.i18n.GT.$ (name)))) {
|
| menuLabel += " - " + nativeName;
|
| }if (p++ > 0 && (p % 4 == 1)) this.menuAddSeparator (menu);
|
| this.menuCreateCheckboxItem (menu, menuLabel, "language = \"" + code + "\" ##" + name, id + "." + code, language.equals (code), false);
|
| }}
|
| });
|
| Clazz_defineMethod (c$, "updateSpecialMenuItem",
|
| function (m) {
|
| m.setText (this.getSpecialLabel (m.getName (), m.getText ()));
|
| }, "javajs.awt.SC");
|
| Clazz_defineMethod (c$, "getSpecialLabel",
|
| function (name, text) {
|
| var pt = text.indexOf (" (");
|
| if (pt < 0) pt = text.length;
|
| var info = null;
|
| if (name.indexOf ("captureLooping") >= 0) info = (this.vwr.am.animationReplayMode == 1073742070 ? "ONCE" : "LOOP");
|
| else if (name.indexOf ("captureFps") >= 0) info = "" + this.vwr.getInt (553648132);
|
| else if (name.indexOf ("captureMenu") >= 0) info = (this.vwr.captureParams == null ? J.i18n.GT.$ ("not capturing") : this.vwr.fm.getFilePath (this.vwr.captureParams.get ("captureFileName"), false, true) + " " + this.vwr.captureParams.get ("captureCount"));
|
| return (info == null ? text : text.substring (0, pt) + " (" + info + ")");
|
| }, "~S,~S");
|
| Clazz_defineStatics (c$,
|
| "UPDATE_NEVER", -1,
|
| "UPDATE_ALL", 0,
|
| "UPDATE_CONFIG", 1,
|
| "UPDATE_SHOW", 2,
|
| "MENUITEM_HEIGHT", 20);
|
| });
|
| Clazz_declarePackage ("J.awtjs2d");
|
| Clazz_load (["J.popup.JmolGenericPopup"], "J.awtjs2d.JmolJSPopup", ["J.i18n.GT", "J.popup.JSSwingPopupHelper", "$.MainPopupResourceBundle"], function () {
|
| c$ = Clazz_declareType (J.awtjs2d, "JmolJSPopup", J.popup.JmolGenericPopup);
|
| Clazz_makeConstructor (c$,
|
| function () {
|
| Clazz_superConstructor (this, J.awtjs2d.JmolJSPopup, []);
|
| this.helper = new J.popup.JSSwingPopupHelper (this);
|
| });
|
| Clazz_overrideMethod (c$, "jpiInitialize",
|
| function (vwr, menu) {
|
| var doTranslate = J.i18n.GT.setDoTranslate (true);
|
| var bundle = new J.popup.MainPopupResourceBundle (this.strMenuStructure = menu, this.menuText);
|
| this.initialize (vwr, bundle, bundle.getMenuName ());
|
| J.i18n.GT.setDoTranslate (doTranslate);
|
| }, "javajs.awt.PlatformViewer,~S");
|
| Clazz_overrideMethod (c$, "menuShowPopup",
|
| function (popup, x, y) {
|
| try {
|
| (popup).show (this.isTainted ? this.vwr.html5Applet : null, x, y);
|
| } catch (e) {
|
| if (Clazz_exceptionOf (e, Exception)) {
|
| } else {
|
| throw e;
|
| }
|
| }
|
| this.isTainted = false;
|
| }, "javajs.awt.SC,~N,~N");
|
| Clazz_overrideMethod (c$, "menuSetCheckBoxOption",
|
| function (item, name, what) {
|
| return null;
|
| }, "javajs.awt.SC,~S,~S");
|
| Clazz_overrideMethod (c$, "getImageIcon",
|
| function (fileName) {
|
| return null;
|
| }, "~S");
|
| Clazz_overrideMethod (c$, "menuFocusCallback",
|
| function (name, actionCommand, b) {
|
| }, "~S,~S,~B");
|
| });
|
| })(Clazz
|
| ,Clazz.getClassName
|
| ,Clazz.newLongArray
|
| ,Clazz.doubleToByte
|
| ,Clazz.doubleToInt
|
| ,Clazz.doubleToLong
|
| ,Clazz.declarePackage
|
| ,Clazz.instanceOf
|
| ,Clazz.load
|
| ,Clazz.instantialize
|
| ,Clazz.decorateAsClass
|
| ,Clazz.floatToInt
|
| ,Clazz.floatToLong
|
| ,Clazz.makeConstructor
|
| ,Clazz.defineEnumConstant
|
| ,Clazz.exceptionOf
|
| ,Clazz.newIntArray
|
| ,Clazz.defineStatics
|
| ,Clazz.newFloatArray
|
| ,Clazz.declareType
|
| ,Clazz.prepareFields
|
| ,Clazz.superConstructor
|
| ,Clazz.newByteArray
|
| ,Clazz.declareInterface
|
| ,Clazz.p0p
|
| ,Clazz.pu$h
|
| ,Clazz.newShortArray
|
| ,Clazz.innerTypeInstance
|
| ,Clazz.isClassDefined
|
| ,Clazz.prepareCallback
|
| ,Clazz.newArray
|
| ,Clazz.castNullAs
|
| ,Clazz.floatToShort
|
| ,Clazz.superCall
|
| ,Clazz.decorateAsType
|
| ,Clazz.newBooleanArray
|
| ,Clazz.newCharArray
|
| ,Clazz.implementOf
|
| ,Clazz.newDoubleArray
|
| ,Clazz.overrideConstructor
|
| ,Clazz.clone
|
| ,Clazz.doubleToShort
|
| ,Clazz.getInheritedLevel
|
| ,Clazz.getParamsType
|
| ,Clazz.isAF
|
| ,Clazz.isAB
|
| ,Clazz.isAI
|
| ,Clazz.isAS
|
| ,Clazz.isASS
|
| ,Clazz.isAP
|
| ,Clazz.isAFloat
|
| ,Clazz.isAII
|
| ,Clazz.isAFF
|
| ,Clazz.isAFFF
|
| ,Clazz.tryToSearchAndExecute
|
| ,Clazz.getStackTrace
|
| ,Clazz.inheritArgs
|
| ,Clazz.alert
|
| ,Clazz.defineMethod
|
| ,Clazz.overrideMethod
|
| ,Clazz.declareAnonymous
|
|
|
| ,Clazz.cloneFinals
|
| );
|
|
|
