{
 "cells": [
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   "cell_type": "code",
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   "id": "9b512a71-e349-4e94-82bd-3d1651e04001",
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   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "\u001b[0m\u001b[01;34mACROBAT\u001b[0m/                       \u001b[01;34mHEROHE\u001b[0m/\n",
      "\u001b[01;34mADP\u001b[0m/                           \u001b[34;42mICIA2018\u001b[0m/\n",
      "\u001b[01;34mALL-IDB1\u001b[0m/                      \u001b[01;34mJanowczyk\u001b[0m/\n",
      "\u001b[01;34mANHIR\u001b[0m/                         \u001b[01;34mkaggle_blood_cells\u001b[0m/\n",
      "\u001b[01;34mapl\u001b[0m/                           \u001b[34;42mKatherCRC\u001b[0m/\n",
      "\u001b[01;34mARCH\u001b[0m/                          \u001b[01;34mKather_texture\u001b[0m/\n",
      "\u001b[01;34mBCCD\u001b[0m/                          \u001b[01;34mKIMIApath\u001b[0m/\n",
      "\u001b[01;34mBCI\u001b[0m/                           \u001b[01;34mKomura\u001b[0m/\n",
      "\u001b[34;42mBCNB\u001b[0m/                          \u001b[01;34mKRD_WBC\u001b[0m/\n",
      "\u001b[01;34mBCSS\u001b[0m/                          \u001b[01;34mLC25000\u001b[0m/\n",
      "\u001b[01;34mblood_cell_detection_kaggle\u001b[0m/   \u001b[34;42mLISC\u001b[0m/\n",
      "\u001b[01;34mbloodmnist\u001b[0m/                    \u001b[01;34mLYON19\u001b[0m/\n",
      "\u001b[01;34mBM_cytomorphology_data\u001b[0m/        \u001b[01;34mmalaria_smear\u001b[0m/\n",
      "\u001b[34;42mBRACS\u001b[0m/                         \u001b[01;34mMedFM\u001b[0m/\n",
      "\u001b[34;42mBreakHis\u001b[0m/                      \u001b[01;34mMHIST\u001b[0m/\n",
      "\u001b[34;42mBreCaHAD\u001b[0m/                      \u001b[01;34mMIDOG21\u001b[0m/\n",
      "\u001b[01;34mcam50\u001b[0m/                         \u001b[01;34mMIDOG22\u001b[0m/\n",
      "\u001b[01;34mCAMEL\u001b[0m/                         \u001b[01;34mmodels\u001b[0m/\n",
      "\u001b[01;34mCAMELYON16\u001b[0m/                    \u001b[01;34mMoNuSAC\u001b[0m/\n",
      "\u001b[34;42mCAMELYON17\u001b[0m/                    \u001b[01;34mMoNuSeg\u001b[0m/\n",
      "\u001b[01;32mcam_enlist.sh\u001b[0m*                 \u001b[01;34mNewTCGA\u001b[0m/\n",
      "cam_paths.txt                  \u001b[01;34mNuClick\u001b[0m/\n",
      "\u001b[01;32mcam_symlink.sh\u001b[0m*                \u001b[01;34mOcelot\u001b[0m/\n",
      "\u001b[34;42mCCEDD\u001b[0m/                         \u001b[01;34mpaip\u001b[0m/\n",
      "\u001b[01;34mCellSeg\u001b[0m/                       \u001b[34;42mPAIP\u001b[0m/\n",
      "\u001b[34;42mCervicalCancerLiquidCytology\u001b[0m/  \u001b[01;34mpancancer\u001b[0m/\n",
      "\u001b[01;34mChaoyang\u001b[0m/                      \u001b[01;34mPANDA\u001b[0m/\n",
      "\u001b[01;34mCHULA\u001b[0m/                         \u001b[01;34mPanNuke\u001b[0m/\n",
      "\u001b[01;34mcligen-tcga\u001b[0m/                   \u001b[01;34mPatchCamelyon\u001b[0m/\n",
      "\u001b[01;34mCoCaHis\u001b[0m/                       \u001b[01;34mpatch_extract\u001b[0m/\n",
      "\u001b[01;34mCoNIC\u001b[0m/                         \u001b[34;42mpatch_lists\u001b[0m/\n",
      "\u001b[01;34mCPM_15_and_17\u001b[0m/                 \u001b[01;34mpathmnist\u001b[0m/\n",
      "\u001b[34;42mCPTAC\u001b[0m/                         \u001b[01;34mraabin_leukemia\u001b[0m/\n",
      "\u001b[01;34mCPTAC_CCRCC\u001b[0m/                   \u001b[34;42mraabin_wbc\u001b[0m/\n",
      "\u001b[01;34mCPTAC_LSCC\u001b[0m/                    \u001b[01;34msegmentation_WBC\u001b[0m/\n",
      "\u001b[01;34mCPTAC_LUAD\u001b[0m/                    \u001b[01;34mSegPC\u001b[0m/\n",
      "\u001b[01;34mCryoNuSeg\u001b[0m/                     \u001b[01;34mSICAP\u001b[0m/\n",
      "\u001b[01;31mD1156_files.zip\u001b[0m                \u001b[01;34mSPIE\u001b[0m/\n",
      "\u001b[01;31mD3378_files.zip\u001b[0m                \u001b[01;34msvs_files\u001b[0m/\n",
      "\u001b[01;34mDataContainers\u001b[0m/                svs_files_brca.txt\n",
      "\u001b[01;34mDLBCL\u001b[0m/                         svs_files_gbm.txt\n",
      "\u001b[01;34mENDO-AID\u001b[0m/                      \u001b[34;42mTCGA\u001b[0m/\n",
      "\u001b[01;34meval\u001b[0m/                          \u001b[01;34mtcga_patches\u001b[0m/\n",
      "\u001b[34;42mfeatures_NCT-CRC-100k\u001b[0m/         \u001b[01;34mTIGER\u001b[0m/\n",
      "\u001b[01;34mfeatures_NCT-CRC-100k-nonorm\u001b[0m/  \u001b[01;34mTNBC\u001b[0m/\n",
      "\u001b[01;34mfeaturesNewTCGA\u001b[0m/               \u001b[01;34mUNITOPATHO\u001b[0m/\n",
      "\u001b[01;34mgithub_dataset_overview\u001b[0m/       \u001b[01;34mwartyhog_blood\u001b[0m/\n",
      "\u001b[01;34mGleason_CNN\u001b[0m/                   \u001b[01;34mWBC_zenodo\u001b[0m/\n",
      "\u001b[01;34mGTEx\u001b[0m/                          \u001b[01;34mWSS4LUAD\u001b[0m/\n"
     ]
    }
   ],
   "source": [
    "ls /lustre/groups/shared/histology_data"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "id": "f23e0faa-b77d-4ac0-af2a-e571d7f70c2f",
   "metadata": {},
   "outputs": [],
   "source": []
  }
 ],
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