Update app.py
Browse files
app.py
CHANGED
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@@ -3,10 +3,26 @@ import numpy as np
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import matplotlib
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matplotlib.use('Agg')
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import matplotlib.pyplot as plt
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COLORS = ['#00d4ff','#7c3aed','#f59e0b','#10b981','#f43f5e',
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'#a78bfa','#34d399','#fb923c','#60a5fa','#e879f9']
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def parse_points(text):
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points, errors = [], []
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for i, line in enumerate([l.strip() for l in text.strip().split('\n') if l.strip()]):
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@@ -20,83 +36,122 @@ def parse_points(text):
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errors.append(f"Line {i+1}: invalid numbers")
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return (np.array(points) if points else None), errors
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def
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n = len(points) if points is not None else 0
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return f"❌ Need at least 6 points (you entered {n})", None, None, None
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n = len(points)
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mean = np.mean(points, axis=0)
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centered = points - mean
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cov = np.cov(centered.T)
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eigenvalues, eigenvectors = np.linalg.eigh(cov)
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idx = np.argsort(eigenvalues)[::-1]
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eigenvalues = eigenvalues[idx]
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eigenvectors = eigenvectors[:, idx]
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W = eigenvectors[:, :2]
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projected = centered @ W
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var_exp = eigenvalues / np.sum(eigenvalues) * 100
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thin = "-" * 58
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L = []
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L.append(sep)
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L.append(" PCA | 3D to 2D DIMENSIONALITY REDUCTION")
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L.append(sep)
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-
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L.append(" " + thin)
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L.append(f" {'#':<6} {'X':>
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L.append(" " + thin)
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for i, p in enumerate(points):
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L.append(f" P{i+1:<5} {p[0]
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L.append(" " + thin)
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L.append(f" Mean = ({mean[0]
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L.append(f" {'#':<6} {'X-mx':>
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L.append(" " + thin)
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for i, p in enumerate(centered):
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L.append(f" P{i+1:<5} {p[0]
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L.append(" " + thin)
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L.append(f" {'':>6} {'X':>
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for i, lbl in enumerate(['X','Y','Z']):
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L.append(f" {lbl:<6}" + "".join(f"{cov[i,j]
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-
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L.append(" " + thin)
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for i in range(3):
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ev = eigenvectors[:, i]
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L.append(" " + thin)
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L.append(" " + thin)
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L.append(f" {'':>4} {'PC1':>
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for i, lbl in enumerate(['x','y','z']):
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L.append(f" {lbl:<4} {W[i,0]
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L.append(" " + thin)
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L.append(f" {'#':<6} {'3D (X, Y, Z)':<
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L.append(" " + thin)
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for i in range(
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L.append("\n" + sep)
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fig1 = make_3d_plot(points, mean)
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fig2 = make_2d_plot(projected, var_exp)
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@@ -114,7 +169,7 @@ def _style_ax(ax):
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def make_3d_plot(points, mean):
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fig = plt.figure(figsize=(6, 5), facecolor='#0a0e1a')
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ax
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ax.set_facecolor('#111827')
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for pane in [ax.xaxis.pane, ax.yaxis.pane, ax.zaxis.pane]:
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pane.fill = False
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@@ -154,9 +209,8 @@ def make_2d_plot(projected, var_exp):
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def make_var_plot(var_exp):
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fig, (ax1, ax2) = plt.subplots(1, 2, figsize=(8, 4), facecolor='#0a0e1a')
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labels
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bar_colors = ['#00d4ff','#7c3aed','#f59e0b']
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_style_ax(ax1)
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bars = ax1.bar(labels, var_exp, color=bar_colors, edgecolor='#0a0e1a', linewidth=1.5, width=0.5)
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for bar, val in zip(bars, var_exp):
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@@ -165,7 +219,6 @@ def make_var_plot(var_exp):
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ax1.set_title('Variance per PC', color='#e2e8f0', fontsize=10, fontweight='bold', pad=8)
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ax1.set_ylabel('Variance (%)', color='#64748b', fontsize=9)
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ax1.set_ylim(0, max(var_exp)*1.2)
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_style_ax(ax2)
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cum = np.cumsum(var_exp)
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ax2.plot(labels, cum, 'o-', color='#10b981', lw=2.5, markersize=8,
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ax2.set_ylabel('Cumulative (%)', color='#64748b', fontsize=9)
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ax2.set_ylim(0, 115)
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ax2.grid(True, color='#1e293b', lw=0.5)
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fig.tight_layout(pad=2)
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return fig
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# No @import, no external fonts — all inline, loads instantly
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css = """
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* { box-sizing: border-box; }
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-
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body, .gradio-container {
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background: #0a0e1a !important;
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color: #e2e8f0 !important;
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font-family: ui-monospace, 'Cascadia Code', 'Segoe UI Mono', monospace !important;
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}
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-
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.gradio-container { max-width: 1200px !important; margin: 0 auto !important; }
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.header {
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background: #111827;
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border: 1px solid #1e293b;
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@@ -203,17 +251,8 @@ body, .gradio-container {
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padding: 28px 36px;
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margin-bottom: 20px;
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}
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.header
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font-size: 1.9rem;
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font-weight: 800;
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color: #00d4ff;
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margin: 0 0 6px 0;
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letter-spacing: -0.02em;
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}
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.header p { color: #64748b; font-size: 0.82rem; margin: 0; }
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.hint {
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background: rgba(0,212,255,0.04);
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border: 1px solid rgba(0,212,255,0.15);
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line-height: 1.8;
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margin-top: 10px;
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}
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.hint strong { color: #00d4ff; }
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textarea {
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background: #060a12 !important;
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border: 1px solid #1e293b !important;
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@@ -235,16 +272,8 @@ textarea {
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font-size: 0.8rem !important;
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border-radius: 8px !important;
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}
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border-color: #00d4ff !important;
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outline: none !important;
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}
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button {
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font-weight: 700 !important;
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border-radius: 8px !important;
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}
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"""
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EXAMPLE = """1 2 3
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points_input = gr.Textbox(
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label="3D Points (one per line: X Y Z)",
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placeholder="1 2 3\n4 5 6\n...",
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lines=
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value=EXAMPLE
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)
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gr.HTML("""<div class="hint">
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<strong>
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<strong>
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<strong>
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</div>""")
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with gr.Row():
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run_btn = gr.Button("Run PCA", variant="primary")
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clear_btn = gr.Button("Clear", variant="secondary")
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@@ -286,7 +323,7 @@ with gr.Blocks(title="PCA 3D to 2D") as demo:
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steps_out = gr.Textbox(
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label="Full PCA Computation",
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interactive=False,
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lines=
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)
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with gr.Tab("3D Input Plot"):
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plot_3d = gr.Plot(label="Original 3D Points")
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run_btn.click(
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fn=run_pca,
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inputs=points_input,
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outputs=[steps_out, plot_3d, plot_2d, plot_var]
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)
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clear_btn.click(
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import matplotlib
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matplotlib.use('Agg')
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import matplotlib.pyplot as plt
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from fractions import Fraction
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COLORS = ['#00d4ff','#7c3aed','#f59e0b','#10b981','#f43f5e',
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'#a78bfa','#34d399','#fb923c','#60a5fa','#e879f9']
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def to_frac(val, max_denom=64):
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f = Fraction(val).limit_denominator(max_denom)
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return str(f)
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def fmt(val, mode):
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if mode == "Fraction":
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return f"{to_frac(val):>14}"
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elif mode == "Both":
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return f"{val:>10.4f} ({to_frac(val):>10})"
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else:
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return f"{val:>10.4f}"
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def col_width(mode):
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return 24 if mode == "Both" else 14 if mode == "Fraction" else 10
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def parse_points(text):
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points, errors = [], []
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for i, line in enumerate([l.strip() for l in text.strip().split('\n') if l.strip()]):
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errors.append(f"Line {i+1}: invalid numbers")
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return (np.array(points) if points else None), errors
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def build_output(points, mean, centered, cov, eigenvalues, eigenvectors, W, projected, var_exp, mode):
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sep = "=" * 66
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thin = "-" * 66
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cw = col_width(mode)
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L = []
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title_mode = f"({mode})"
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L.append(sep)
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L.append(f" PCA | 3D to 2D DIMENSIONALITY REDUCTION {title_mode}")
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L.append(sep)
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# STEP 1
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L.append(f"\n > STEP 1 | INPUT POINTS")
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L.append(" " + thin)
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L.append(f" {'#':<6} {'X':>{cw}} {'Y':>{cw}} {'Z':>{cw}}")
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L.append(" " + thin)
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for i, p in enumerate(points):
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L.append(f" P{i+1:<5} {fmt(p[0],mode)} {fmt(p[1],mode)} {fmt(p[2],mode)}")
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# STEP 2
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L.append(f"\n > STEP 2 | MEAN & CENTERED POINTS")
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L.append(" " + thin)
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L.append(f" Mean = ( {fmt(mean[0],mode).strip()}, {fmt(mean[1],mode).strip()}, {fmt(mean[2],mode).strip()} )\n")
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L.append(f" {'#':<6} {'X-mx':>{cw}} {'Y-my':>{cw}} {'Z-mz':>{cw}}")
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L.append(" " + thin)
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for i, p in enumerate(centered):
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L.append(f" P{i+1:<5} {fmt(p[0],mode)} {fmt(p[1],mode)} {fmt(p[2],mode)}")
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# STEP 3
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L.append(f"\n > STEP 3 | COVARIANCE MATRIX (3x3)")
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L.append(" " + thin)
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L.append(f" {'':>6} {'X':>{cw}} {'Y':>{cw}} {'Z':>{cw}}")
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for i, lbl in enumerate(['X','Y','Z']):
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L.append(f" {lbl:<6}" + "".join(f"{fmt(cov[i,j],mode)}" for j in range(3)))
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# STEP 4
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L.append(f"\n > STEP 4 | EIGENVALUES & EIGENVECTORS")
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L.append(" " + thin)
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for i in range(3):
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ev = eigenvectors[:, i]
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lv = fmt(eigenvalues[i], mode).strip()
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v0 = fmt(ev[0], mode).strip()
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v1 = fmt(ev[1], mode).strip()
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v2 = fmt(ev[2], mode).strip()
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L.append(f" L{i+1} = {lv:<20} | v{i+1} = [ {v0}, {v1}, {v2} ]")
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# STEP 5
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L.append(f"\n > STEP 5 | TOP 2 PRINCIPAL COMPONENTS")
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L.append(" " + thin)
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for ci, label in enumerate(['PC1','PC2']):
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lv = fmt(eigenvalues[ci], mode).strip()
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w0 = fmt(W[0,ci], mode).strip()
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w1 = fmt(W[1,ci], mode).strip()
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w2 = fmt(W[2,ci], mode).strip()
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L.append(f" {label} L={lv:<20} -> [ {w0}, {w1}, {w2} ]")
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v1s = fmt(var_exp[0], mode).strip()
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v2s = fmt(var_exp[1], mode).strip()
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tot = fmt(var_exp[0]+var_exp[1], mode).strip()
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L.append(f"\n Variance: PC1={v1s}% PC2={v2s}% Total={tot}%")
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# STEP 6
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L.append(f"\n > STEP 6 | PROJECTION MATRIX W (3x2)")
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L.append(" " + thin)
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L.append(f" {'':>4} {'PC1':>{cw}} {'PC2':>{cw}}")
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for i, lbl in enumerate(['x','y','z']):
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L.append(f" {lbl:<4} {fmt(W[i,0],mode)} {fmt(W[i,1],mode)}")
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# STEP 7
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L.append(f"\n > STEP 7 | REDUCED 2D COORDINATES")
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L.append(" " + thin)
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L.append(f" {'#':<6} {'3D (X, Y, Z)':<36} 2D (PC1, PC2)")
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L.append(" " + thin)
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for i in range(len(points)):
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if mode == "Fraction":
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orig = f"({to_frac(points[i,0])}, {to_frac(points[i,1])}, {to_frac(points[i,2])})"
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red = f"({to_frac(projected[i,0])}, {to_frac(projected[i,1])})"
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elif mode == "Both":
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orig = f"({points[i,0]:.2f}, {points[i,1]:.2f}, {points[i,2]:.2f})"
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red = f"({projected[i,0]:.4f} ({to_frac(projected[i,0])}), {projected[i,1]:.4f} ({to_frac(projected[i,1])}))"
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else:
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orig = f"({points[i,0]:.2f}, {points[i,1]:.2f}, {points[i,2]:.2f})"
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+
red = f"({projected[i,0]:.4f}, {projected[i,1]:.4f})"
|
| 121 |
+
L.append(f" P{i+1:<5} {orig:<36} {red}")
|
| 122 |
|
| 123 |
L.append("\n" + sep)
|
| 124 |
+
return "\n".join(L)
|
| 125 |
+
|
| 126 |
+
|
| 127 |
+
def run_pca(points_text, output_mode):
|
| 128 |
+
points, errors = parse_points(points_text)
|
| 129 |
+
if errors:
|
| 130 |
+
return "❌ Input Errors:\n" + "\n".join(errors), None, None, None
|
| 131 |
+
if points is None or len(points) < 6:
|
| 132 |
+
n = len(points) if points is not None else 0
|
| 133 |
+
return f"❌ Need at least 6 points (you entered {n})", None, None, None
|
| 134 |
+
|
| 135 |
+
mean = np.mean(points, axis=0)
|
| 136 |
+
centered = points - mean
|
| 137 |
+
cov = np.cov(centered.T)
|
| 138 |
+
eigenvalues, eigenvectors = np.linalg.eigh(cov)
|
| 139 |
+
idx = np.argsort(eigenvalues)[::-1]
|
| 140 |
+
eigenvalues = eigenvalues[idx]
|
| 141 |
+
eigenvectors = eigenvectors[:, idx]
|
| 142 |
+
W = eigenvectors[:, :2]
|
| 143 |
+
projected = centered @ W
|
| 144 |
+
var_exp = eigenvalues / np.sum(eigenvalues) * 100
|
| 145 |
+
|
| 146 |
+
if output_mode == "Both (Decimal + Fraction)":
|
| 147 |
+
# Show both sections separated
|
| 148 |
+
dec_block = build_output(points, mean, centered, cov, eigenvalues, eigenvectors, W, projected, var_exp, "Decimal")
|
| 149 |
+
frac_block = build_output(points, mean, centered, cov, eigenvalues, eigenvectors, W, projected, var_exp, "Fraction")
|
| 150 |
+
output_text = dec_block + "\n\n\n" + frac_block
|
| 151 |
+
elif output_mode == "Fraction only":
|
| 152 |
+
output_text = build_output(points, mean, centered, cov, eigenvalues, eigenvectors, W, projected, var_exp, "Fraction")
|
| 153 |
+
else:
|
| 154 |
+
output_text = build_output(points, mean, centered, cov, eigenvalues, eigenvectors, W, projected, var_exp, "Decimal")
|
| 155 |
|
| 156 |
fig1 = make_3d_plot(points, mean)
|
| 157 |
fig2 = make_2d_plot(projected, var_exp)
|
|
|
|
| 169 |
|
| 170 |
def make_3d_plot(points, mean):
|
| 171 |
fig = plt.figure(figsize=(6, 5), facecolor='#0a0e1a')
|
| 172 |
+
ax = fig.add_subplot(111, projection='3d')
|
| 173 |
ax.set_facecolor('#111827')
|
| 174 |
for pane in [ax.xaxis.pane, ax.yaxis.pane, ax.zaxis.pane]:
|
| 175 |
pane.fill = False
|
|
|
|
| 209 |
|
| 210 |
def make_var_plot(var_exp):
|
| 211 |
fig, (ax1, ax2) = plt.subplots(1, 2, figsize=(8, 4), facecolor='#0a0e1a')
|
| 212 |
+
labels = ['PC1','PC2','PC3']
|
| 213 |
bar_colors = ['#00d4ff','#7c3aed','#f59e0b']
|
|
|
|
| 214 |
_style_ax(ax1)
|
| 215 |
bars = ax1.bar(labels, var_exp, color=bar_colors, edgecolor='#0a0e1a', linewidth=1.5, width=0.5)
|
| 216 |
for bar, val in zip(bars, var_exp):
|
|
|
|
| 219 |
ax1.set_title('Variance per PC', color='#e2e8f0', fontsize=10, fontweight='bold', pad=8)
|
| 220 |
ax1.set_ylabel('Variance (%)', color='#64748b', fontsize=9)
|
| 221 |
ax1.set_ylim(0, max(var_exp)*1.2)
|
|
|
|
| 222 |
_style_ax(ax2)
|
| 223 |
cum = np.cumsum(var_exp)
|
| 224 |
ax2.plot(labels, cum, 'o-', color='#10b981', lw=2.5, markersize=8,
|
|
|
|
| 231 |
ax2.set_ylabel('Cumulative (%)', color='#64748b', fontsize=9)
|
| 232 |
ax2.set_ylim(0, 115)
|
| 233 |
ax2.grid(True, color='#1e293b', lw=0.5)
|
|
|
|
| 234 |
fig.tight_layout(pad=2)
|
| 235 |
return fig
|
| 236 |
|
| 237 |
|
|
|
|
| 238 |
css = """
|
| 239 |
* { box-sizing: border-box; }
|
|
|
|
| 240 |
body, .gradio-container {
|
| 241 |
background: #0a0e1a !important;
|
| 242 |
color: #e2e8f0 !important;
|
| 243 |
font-family: ui-monospace, 'Cascadia Code', 'Segoe UI Mono', monospace !important;
|
| 244 |
}
|
|
|
|
| 245 |
.gradio-container { max-width: 1200px !important; margin: 0 auto !important; }
|
|
|
|
| 246 |
.header {
|
| 247 |
background: #111827;
|
| 248 |
border: 1px solid #1e293b;
|
|
|
|
| 251 |
padding: 28px 36px;
|
| 252 |
margin-bottom: 20px;
|
| 253 |
}
|
| 254 |
+
.header h1 { font-size: 1.9rem; font-weight: 800; color: #00d4ff; margin: 0 0 6px 0; }
|
| 255 |
+
.header p { color: #64748b; font-size: 0.82rem; margin: 0; }
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 256 |
.hint {
|
| 257 |
background: rgba(0,212,255,0.04);
|
| 258 |
border: 1px solid rgba(0,212,255,0.15);
|
|
|
|
| 263 |
line-height: 1.8;
|
| 264 |
margin-top: 10px;
|
| 265 |
}
|
|
|
|
| 266 |
.hint strong { color: #00d4ff; }
|
|
|
|
| 267 |
textarea {
|
| 268 |
background: #060a12 !important;
|
| 269 |
border: 1px solid #1e293b !important;
|
|
|
|
| 272 |
font-size: 0.8rem !important;
|
| 273 |
border-radius: 8px !important;
|
| 274 |
}
|
| 275 |
+
textarea:focus { border-color: #00d4ff !important; outline: none !important; }
|
| 276 |
+
button { font-weight: 700 !important; border-radius: 8px !important; }
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 277 |
"""
|
| 278 |
|
| 279 |
EXAMPLE = """1 2 3
|
|
|
|
| 297 |
points_input = gr.Textbox(
|
| 298 |
label="3D Points (one per line: X Y Z)",
|
| 299 |
placeholder="1 2 3\n4 5 6\n...",
|
| 300 |
+
lines=10,
|
| 301 |
value=EXAMPLE
|
| 302 |
)
|
| 303 |
+
|
| 304 |
+
output_mode = gr.Radio(
|
| 305 |
+
choices=["Decimal only", "Fraction only", "Both (Decimal + Fraction)"],
|
| 306 |
+
value="Both (Decimal + Fraction)",
|
| 307 |
+
label="Output Format"
|
| 308 |
+
)
|
| 309 |
+
|
| 310 |
gr.HTML("""<div class="hint">
|
| 311 |
+
<strong>Decimal:</strong> 0.3333<br>
|
| 312 |
+
<strong>Fraction:</strong> 1/3<br>
|
| 313 |
+
<strong>Both:</strong> shows decimal then fraction section
|
| 314 |
</div>""")
|
| 315 |
+
|
| 316 |
with gr.Row():
|
| 317 |
run_btn = gr.Button("Run PCA", variant="primary")
|
| 318 |
clear_btn = gr.Button("Clear", variant="secondary")
|
|
|
|
| 323 |
steps_out = gr.Textbox(
|
| 324 |
label="Full PCA Computation",
|
| 325 |
interactive=False,
|
| 326 |
+
lines=36
|
| 327 |
)
|
| 328 |
with gr.Tab("3D Input Plot"):
|
| 329 |
plot_3d = gr.Plot(label="Original 3D Points")
|
|
|
|
| 334 |
|
| 335 |
run_btn.click(
|
| 336 |
fn=run_pca,
|
| 337 |
+
inputs=[points_input, output_mode],
|
| 338 |
outputs=[steps_out, plot_3d, plot_2d, plot_var]
|
| 339 |
)
|
| 340 |
clear_btn.click(
|