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Delete rag_pipeline.py
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rag_pipeline.py
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from datasets import load_dataset
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import pandas as pd
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from sentence_transformers import SentenceTransformer
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import faiss
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from transformers import pipeline
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class RAGPipeline:
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def __init__(self):
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self.embedder = SentenceTransformer("sentence-transformers/all-MiniLM-L6-v2")
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self.generator = pipeline("text2text-generation", model="google/flan-t5-base")
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# Load dataset directly
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ds = load_dataset("pubmed_qa", "pqa_labeled", split="train[:500]")
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self.documents = ds["context"]
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self.questions = ds["question"]
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self.index = self.build_faiss_index()
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def build_faiss_index(self):
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embeddings = self.embedder.encode(self.documents, convert_to_numpy=True)
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index = faiss.IndexFlatL2(embeddings.shape[1])
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index.add(embeddings)
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return index
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def retrieve(self, query, top_k=5):
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query_embedding = self.embedder.encode([query], convert_to_numpy=True)
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scores, indices = self.index.search(query_embedding, top_k)
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return [self.documents[i] for i in indices[0]]
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def generate_answer(self, query):
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docs = self.retrieve(query)
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context = " ".join(docs)
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prompt = f"Answer the following medical question using the context:\nContext: {context}\nQuestion: {query}"
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result = self.generator(prompt, max_length=200, do_sample=True)
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return result[0]['generated_text']
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