provinans / data /taxonomy /dimensions.csv
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dimension,value_kind,closure,note
histologic_type,coded,exactly_one,"Residual other_nos makes the sibling set exhaustive (docs/taxonomy.md section 1.1)."
figo_grade,coded,exactly_one,"Applies only on the endometrioid branch (CAP Note D)."
grade_binary,derived,exactly_one,"membership: {1,2} low, {3} high (docs section 2)."
histotype_aggressiveness,derived,exactly_one,"membership over histologic_type and figo_grade; partial (endometrioid of unknown grade is indeterminate)."
invasion_depth,quantity,zero_or_one,"Millimetres. Numbers stay numbers."
myometrial_thickness,quantity,zero_or_one,"Millimetres."
myometrial_invasion_percent,derived,zero_or_one,"formula: ratio_percent(invasion_depth, myometrial_thickness)."
myometrial_invasion_category,derived,exactly_one,"threshold at 0% and 50%: none, less_than_half, half_or_more."
cervical_stromal_invasion,coded,exactly_one,"present, absent, cannot_be_assessed (docs section 1.4)."
cervical_invasion_depth,quantity,zero_or_one,"Millimetres."
cervical_wall_thickness,quantity,zero_or_one,"Millimetres."
cervical_wall_percent,derived,zero_or_one,"formula: ratio_percent bound a second time to the cervical quantities."
lvsi_status,coded,exactly_one,"present, not_identified, suspicious, cannot_be_determined (docs section 1.5)."
lvsi_foci_count,quantity,zero_or_one,"Number of involved vessels. No report in this corpus states one."
lvsi_extent,derived,exactly_one,"threshold on lvsi_foci_count scoped by coding system: negative, focal, substantial (docs section 5)."
pn_category,coded,exactly_one,"pN0, pN0_i_plus, pN1mi, pN1a, pN2mi, pN2a (docs section 1.6)."
pole_exonuclease_mutation,coded,zero_or_one,"POLE exonuclease sequencing result."
mmr_ihc,coded,zero_or_one,"intact, lost, subclonal_loss (docs section 1.7)."
p53_ihc,coded,zero_or_one,"wild_type, abnormal (docs section 1.7)."
promise_class,derived,exactly_one,"membership over the three assays (docs section 1.7, 3.1)."
tcga_class,coded,exactly_one,"pole_ultramutated, msi_hypermutated, copy_number_low, copy_number_high."
figo_stage,derived,exactly_one,"An algorithm, one per edition (docs section 4). Not a formula/threshold/membership row."