provinans / frontend /src /data /redcapCoverage.ts
reversely's picture
Upload folder using huggingface_hub
5c32eb4 verified
Raw
History Blame Contribute Delete
32.2 kB
// GENERATED, de-identified. Do not edit by hand.
// Derived from a partner REDCap data dictionary (204 fields). The dictionary
// CSVs are local-only and are not committed; this file carries only generic
// medical schema: field name, label, section, a clean source class, and the
// live-fill mapping. No clinic or person name is carried through.
//
// source: which class fulfils the field in this archive.
// pathology_extraction our tool reads it from the scanned pathology report
// clinical_join arrives from the linked GDC clinical record
// registry_join a national cancer registry supplies it
// local_research only the partner captures it, by chart review
// none record-keeping or no source
//
// fill: how the field's confirmed-dataset fill is measured live, when it can be.
// { via: 'checklist', field } reads confirmed/total of that endopath field from GET /api/dashboard
// { via: 'outcome', metric } reads the metric's rate from GET /api/longitudinal/cohort
// A field with no fill has a source but no live measure, so the page shows source only.
export type RedcapSource =
| "pathology_extraction"
| "clinical_join"
| "registry_join"
| "local_research"
| "none";
export type RedcapFill =
| { via: "checklist"; field: string }
| { via: "outcome"; metric: "recurrence" | "vital" | "chemotherapy" | "radiation" | "hormone" };
export interface RedcapCoverageField {
name: string;
label: string;
section: string;
source: RedcapSource;
fill?: RedcapFill;
}
// The dictionary's sections, in dictionary order.
export const REDCAP_SECTIONS: string[] = [
"Record ID",
"Demographic Details",
"Clinical Consult",
"Preop Radiology Findings",
"Preop Ca125",
"Info from OP Note",
"PATH PARAMETERS - Biopsy",
"PATH PARAMETERS - HYST",
"PATH PARAMETERS- HYST- Ovary and other",
"PATH PARAMETERS - Cytology",
"Regional Lymph Node Status",
"Treatment - CHEMO/HORMONES",
"Treatment RTX",
"Immune Therapy or Clinical Trial",
"Hereditary Cancer Program (HCP)",
"Surveillance",
"Follow up/RECURRENCE",
"Final Comments",
"Form Status",
];
export const REDCAP_COVERAGE: RedcapCoverageField[] = [
{ name: "record_id", label: "Record ID", section: "Record ID", source: "none" },
{ name: "pt_id", label: "Unique patient identifier", section: "Demographic Details", source: "clinical_join" },
{ name: "dob", label: "Date of birth", section: "Demographic Details", source: "clinical_join" },
{ name: "height_cm", label: "Height (cm)", section: "Demographic Details", source: "clinical_join" },
{ name: "weight_kg", label: "Weight (kg)", section: "Demographic Details", source: "clinical_join" },
{ name: "bmi", label: "BMI", section: "Demographic Details", source: "clinical_join" },
{ name: "bmi_auto", label: "BMI (auto-calculated)", section: "Demographic Details", source: "clinical_join" },
{ name: "date_dx", label: "Date of diagnosis", section: "Demographic Details", source: "clinical_join" },
{ name: "date_dx_user_update", label: "Need to modify the date of diagnosis?", section: "Demographic Details", source: "clinical_join" },
{ name: "date_dx_user", label: "Date of diagnosis (manual)", section: "Demographic Details", source: "clinical_join" },
{ name: "date_dx_user_cmt", label: "Comments re changes to date of diagnosis", section: "Demographic Details", source: "clinical_join" },
{ name: "site_num", label: "Site number: indicates the nth cancer site this patient is", section: "Demographic Details", source: "clinical_join" },
{ name: "site_num_user_update", label: "Need to modify the site number?", section: "Demographic Details", source: "clinical_join" },
{ name: "site_num_user", label: "Site number (manual)", section: "Demographic Details", source: "clinical_join" },
{ name: "site_num_user_cmt", label: "Comments re changes to site number", section: "Demographic Details", source: "clinical_join" },
{ name: "full_term_pregnancies", label: "Parity", section: "Clinical Consult", source: "local_research" },
{ name: "immunosuppressed_y_n", label: "Is the patient immunosuppressed?", section: "Clinical Consult", source: "local_research" },
{ name: "immunosuppressed_info", label: "Information on immunosuppression", section: "Clinical Consult", source: "local_research" },
{ name: "immunosuppressed_explain", label: "Please include any additional information regarding the", section: "Clinical Consult", source: "none" },
{ name: "history_of_hormonal_contraceptive", label: "History of hormonal contraceptive use (pick one)", section: "Clinical Consult", source: "local_research" },
{ name: "hormonal_contraceptive_type", label: "Hormonal contraceptive type", section: "Clinical Consult", source: "local_research" },
{ name: "specify_hormonal_contraceptive_type", label: "Please specify hormonal contraceptive type (free text)", section: "Clinical Consult", source: "none" },
{ name: "tamoxifen_use", label: "Tamoxifen use (pick one)", section: "Clinical Consult", source: "local_research" },
{ name: "menopause_status", label: "Menopause status (pick one)", section: "Clinical Consult", source: "local_research" },
{ name: "hrt_use", label: "HRT use (pick one)", section: "Clinical Consult", source: "local_research" },
{ name: "specify_hrt_use", label: "Please specify HRT use (free text)", section: "Clinical Consult", source: "none" },
{ name: "patient_s_ethnicity", label: "Is information about the patient's ethnicity of this", section: "Clinical Consult", source: "registry_join" },
{ name: "ethnicity_new", label: "Ethnicity group", section: "Clinical Consult", source: "registry_join" },
{ name: "specify_ethnicity_group", label: "Please specify ethnicity group (free text)", section: "Clinical Consult", source: "none" },
{ name: "ethnicity", label: "Ethnicity group (pick any that apply)", section: "Clinical Consult", source: "registry_join" },
{ name: "aboriginal_group", label: "Which aboriginal group did patient belong to?", section: "Clinical Consult", source: "registry_join" },
{ name: "ethnic_ancestry", label: "Ethnic ancestry", section: "Clinical Consult", source: "registry_join" },
{ name: "aboriginal_ancestry", label: "Which aboriginal ancestry did patient have?", section: "Clinical Consult", source: "registry_join" },
{ name: "comorb", label: "Clinical comorbidities", section: "Clinical Consult", source: "registry_join" },
{ name: "other_comorb", label: "Please specify clinical comorbidities (free text)", section: "Clinical Consult", source: "none" },
{ name: "family_history_colorectal_cancer", label: "Did patient have family history of colorectal cancer?", section: "Clinical Consult", source: "local_research" },
{ name: "specify_family_history_colorectal_cancer", label: "Please specify family history of colorectal cancer (free text)", section: "Clinical Consult", source: "local_research" },
{ name: "personal_history_colorectal_cancer", label: "Did patient have personal history of colorectal cancer?", section: "Clinical Consult", source: "local_research" },
{ name: "specify_personal_history_colorectal_cancer", label: "Please specify personal history of colorectal cancer", section: "Clinical Consult", source: "none" },
{ name: "imaging_preop", label: "Preop imaging performed?", section: "Preop Radiology Findings", source: "none" },
{ name: "preop_imaging_modality", label: "PreOp imaging modality", section: "Preop Radiology Findings", source: "local_research" },
{ name: "tumour_size_image_avai", label: "Is tumour size or endometrial thickness on imaging", section: "Preop Radiology Findings", source: "none" },
{ name: "tumour_size_imaging", label: "Tumour size or endometrial thickness on imaging (cm,", section: "Preop Radiology Findings", source: "local_research" },
{ name: "ca125_level_avai", label: "Is preop CA125 level documented?", section: "Preop Ca125", source: "none" },
{ name: "ca125_level", label: "Preop CA125 level (U/mL)", section: "Preop Ca125", source: "local_research" },
{ name: "ca125_assay", label: "Name of CA125 assay used, if known (free text)", section: "Preop Ca125", source: "none" },
{ name: "clinical_stage", label: "Clinical stage", section: "Info from OP Note", source: "registry_join" },
{ name: "post_surg_imaging", label: "Was imaging undertaken after Hyst that resulted in", section: "Info from OP Note", source: "local_research" },
{ name: "upstaged_by_post_op_imaging", label: "Please detail imaging modality used and findings", section: "Info from OP Note", source: "none" },
{ name: "clinical_stage_freetext", label: "Please provide the clinical stage (free text)", section: "Info from OP Note", source: "none" },
{ name: "neoadj", label: "Did the patient have neoadjuvant or primary", section: "Info from OP Note", source: "registry_join" },
{ name: "staging_procedure", label: "Did this patient have a staging", section: "Info from OP Note", source: "registry_join" },
{ name: "date_surg", label: "Date of surgery", section: "Info from OP Note", source: "registry_join" },
{ name: "procedure_type", label: "Hysterectomy, procedure type (pick one)", section: "Info from OP Note", source: "registry_join" },
{ name: "procedure_type_freetext", label: "Please specify procedure type (free text)", section: "Info from OP Note", source: "none" },
{ name: "gyn_sur", label: "Was the surgery performed by a general gynecologist or", section: "Info from OP Note", source: "local_research" },
{ name: "ascites", label: "Ascites (pick one)", section: "Info from OP Note", source: "local_research" },
{ name: "gross_residual_disease", label: "Gross residual disease (pick one)", section: "Info from OP Note", source: "registry_join" },
{ name: "hist_dx", label: "Biopsy histologic type", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction", fill: {"via": "checklist", "field": "histologic_type"} },
{ name: "specify_histologic_type", label: "Please specify the histologic type (free text)", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "mixed_cell_carci_biopsy", label: "Please specify types and percentages of mixed cell", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "grade", label: "Biopsy grade (pick one)", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction", fill: {"via": "checklist", "field": "histologic_grade"} },
{ name: "date_biopsy_reported", label: "Date of biopsy reported", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "ihc", label: "IHC performed on biopsy?", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "msh6_biopsy", label: "MSH6 performed?", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "msh6_staining_biopsy", label: "MSH6 staining", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "pms2_biopsy", label: "PMS2 performed?", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "pms2_staining_biopsy", label: "PMS2 staining", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "msh2_biopsy", label: "MSH2 performed?", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "msh2_staining_biopsy", label: "MSH2 staining", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "mlh1_biopsy", label: "MLH1 performed?", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "mlh1_staining_biopsy", label: "MLH1 staining", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "p53_biopsy", label: "p53 staining performed?", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "p53_staining_biopsy", label: "p53 staining", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "other_ihc_performed", label: "Other IHC performed?", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "other_ihc", label: "Please specify other IHC performed and reported", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "mlh1meth_testing", label: "MLH1 hypermethylation testing performed on either", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "mlh1meth_testing_ans", label: "Hypermethylation test result (pick one)", section: "PATH PARAMETERS - Biopsy", source: "pathology_extraction" },
{ name: "hist", label: "Hysterectomy histotype assigned", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "histologic_type"} },
{ name: "other_endo_carcinoma", label: "Please specify endometrioid carcinoma, other variant", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "type_per_mixedcell", label: "Please specify types and percentages of mixed cell", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "other_histypes", label: "Please specify histologic type that is not listed above", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "hyst_grade", label: "Hysterectomy tumor grade", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "histologic_grade"} },
{ name: "tumor_size", label: "Hysterectomy tumor size in maximum dimension (cm,", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "myo", label: "Myoinvasion (pick one)", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "myometrial_invasion_percent"} },
{ name: "lvi", label: "LVI (pick one)", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "lymphovascular_space_invasion"} },
{ name: "lvi_detail", label: "LVI detail", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "lymphovascular_space_invasion"} },
{ name: "stage_full", label: "FIGO stage (based on Hysterectomy specimen)", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "pathologic_stage"} },
{ name: "tnm_t", label: "TNM - T ( Tumor) T0: No evidence of primary tumor T1", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "pathologic_stage"} },
{ name: "tnm_n", label: "TNM - N ( Nodes) N0: No regional lymph node", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "pathologic_stage"} },
{ name: "tnm_m", label: "TNM - M ( Metastasis) M0 : No distant metastasis M1", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "pathologic_stage"} },
{ name: "cervix", label: "Cervical stromal involvement", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "cervical_stromal_invasion"} },
{ name: "omentum", label: "Was the omentum involved by metastatic carcinoma?", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "ihc_done", label: "IHC performed on hysterectomy specimen?", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "msh6_hyst", label: "MSH6 performed ?", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "msh6_staining_hyst", label: "MSH6 staining", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "molecular_classification"} },
{ name: "pms2_hyst", label: "PMS2 performed?", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "pms2_staining_hyst", label: "PMS2 staining", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "molecular_classification"} },
{ name: "msh2_hyst", label: "MSH2 performed?", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "msh2_staining_hyst", label: "MSH2 staining", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "molecular_classification"} },
{ name: "mlh1_hyst", label: "MLH1 performed?", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "mlh1_staining_hyst", label: "MLH1 staining", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "molecular_classification"} },
{ name: "p53_hyst", label: "p53 staining performed?", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "p53_staining_hyst", label: "p53 staining", section: "PATH PARAMETERS - HYST", source: "pathology_extraction", fill: {"via": "checklist", "field": "molecular_classification"} },
{ name: "other_ihc_performed_hyst", label: "Other IHC performed?", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "other_ihc_hyst", label: "Please specify other IHC performed and reported", section: "PATH PARAMETERS - HYST", source: "pathology_extraction" },
{ name: "adnexal", label: "Adnexal involvement", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "seoc", label: "Was there synchronous ovarian neoplastic pathology", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "seoc_ov_neo", label: "Please select all that apply", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "hist_grd", label: "Please provide histologic grade (pick one)", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "granu_cell_type", label: "Please provide granulosa cell tumor type (pick one)", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "other_seoc_ov_neo", label: "Please select from the drop-down menu (pick one from", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "specify_other_sexcord", label: "Please specify other sex cord-stromal tumor (free text)", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "teratoma_grd", label: "Immature teratoma grade (pick one)", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "other_histype", label: "Please specify other histologic type not listed above", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "ov_neo_path_stage", label: "Please provide the pathologic stage of the ovarian", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "additional_neo_path", label: "Were there any additional neoplastic pathological", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "ov_surface", label: "Surface/capsule involvement of the ovary", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "ov_bilateral", label: "Bilateral ovarian involvement", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "preop_rupture", label: "Pre-operative rupture of the ovarian mass", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "intraop_rupture", label: "Intra-operative rupture of the ovarian mass", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "endometriosis_yn", label: "Presence of endometriosis in the ovary and/or pelvis", section: "PATH PARAMETERS- HYST- Ovary and other", source: "pathology_extraction" },
{ name: "perit_wash", label: "Result of peritoneal washings performed at time of", section: "PATH PARAMETERS - Cytology", source: "pathology_extraction" },
{ name: "lymph_node", label: "Was regional* lymph node sampling performed on this", section: "Regional Lymph Node Status", source: "pathology_extraction", fill: {"via": "checklist", "field": "regional_lymph_node_status"} },
{ name: "lymph_node_sampling", label: "Lymph node sampling (check all that apply)", section: "Regional Lymph Node Status", source: "pathology_extraction" },
{ name: "lymph_node_sampling_other", label: "Please specify lymph node sampling (free text)", section: "Regional Lymph Node Status", source: "pathology_extraction" },
{ name: "total_lymph_nodes", label: "Total number of lymph nodes sampled", section: "Regional Lymph Node Status", source: "pathology_extraction", fill: {"via": "checklist", "field": "regional_lymph_node_status"} },
{ name: "lymph_nodes_with_metas", label: "Total number of lymph nodes with metastatic", section: "Regional Lymph Node Status", source: "pathology_extraction", fill: {"via": "checklist", "field": "regional_lymph_node_status"} },
{ name: "check_lymphnodes_w_metas", label: "Lymph nodes with metastatic involvement (check all", section: "Regional Lymph Node Status", source: "pathology_extraction" },
{ name: "lymph_node_itc", label: "ITC involving how many lymph nodes?", section: "Regional Lymph Node Status", source: "pathology_extraction" },
{ name: "lymph_node_micrometastases", label: "Micrometastases involving how many lymph nodes?", section: "Regional Lymph Node Status", source: "pathology_extraction" },
{ name: "lymph_node_macrometastases", label: "Macrometastases involving how many lymph nodes?", section: "Regional Lymph Node Status", source: "pathology_extraction" },
{ name: "chemo_y_n_adj", label: "Adjuvant chemo given (conventional not hormonal)?", section: "Treatment - CHEMO/HORMONES", source: "clinical_join", fill: {"via": "outcome", "metric": "chemotherapy"} },
{ name: "pharm_dates_known_adj", label: "Are chemo start and end dates known?", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "chemo_start_date", label: "Chemotherapy start date", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "chemo_end_date", label: "Chemotherapy stop date", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "chemo_cycle", label: "Total number of adjuvant chemotherapy cycles?", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "chemo_agent", label: "Chemotherapy agent(s) used (check all that apply)", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "pharm_drugs_other", label: "Please specify other chemotherapy agent(s) used (free text)", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "chemo_y_n_rec", label: "Chemotherapy (conventional not hormonal) given in", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "pharm_drugs_rec", label: "Chemotherapy agent(s) used in the context of", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "pharm_drugs_other_chemo", label: "Please specify other chemo agent(s) used (free text)", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_y_n_pre", label: "Hormonal therapy prior to hysterectomy?", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_dates_y_n", label: "Are hormonal therapy start and end dates known?", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_start_date", label: "Hormonal start date", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_stop", label: "Hormonal end date", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_drugs", label: "Hormonal drug name (check all that apply)", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_drugs_other", label: "Please specify hormonal drug name (free text)", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_y_n_adj", label: "Hormonal therapy after hysterectomy as adjuvant?", section: "Treatment - CHEMO/HORMONES", source: "clinical_join", fill: {"via": "outcome", "metric": "hormone"} },
{ name: "horm_dates_y_n_adj", label: "Are hormonal therapy start and end dates known?", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_start_date_adj", label: "Hormonal start date", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_stop_adj", label: "Hormonal end date", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_drugs_adj", label: "Hormonal drug name (check all that apply)", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "horm_drugs_other_adj", label: "Please specify hormonal drug name (free text)", section: "Treatment - CHEMO/HORMONES", source: "clinical_join" },
{ name: "xrt_y_n_adj", label: "Adjuvant Radiotherapy given?", section: "Treatment RTX", source: "clinical_join", fill: {"via": "outcome", "metric": "radiation"} },
{ name: "xrt_dates_adj", label: "Are radiation start and end dates known?", section: "Treatment RTX", source: "clinical_join" },
{ name: "date_rad_start", label: "Radiation start date", section: "Treatment RTX", source: "clinical_join" },
{ name: "date_rad_end", label: "Radiation end date", section: "Treatment RTX", source: "clinical_join" },
{ name: "rad_type", label: "Radiation type (check all that apply)", section: "Treatment RTX", source: "clinical_join" },
{ name: "distant_disease_specify", label: "Please specify distribution/extent of distant disease", section: "Treatment RTX", source: "clinical_join" },
{ name: "other_xrt_type_specify", label: "Please specify radiation type (free text)", section: "Treatment RTX", source: "clinical_join" },
{ name: "rad_dose", label: "Please specify the radiation dose given (free text)", section: "Treatment RTX", source: "clinical_join" },
{ name: "xrt_fractions", label: "Please specify the number of fractions given (free text)", section: "Treatment RTX", source: "clinical_join" },
{ name: "xrt_y_n_rec", label: "Radiotherapy given in the context of recurrence?", section: "Treatment RTX", source: "clinical_join" },
{ name: "rad_type_rec", label: "Radiation type (check all that apply)", section: "Treatment RTX", source: "clinical_join" },
{ name: "distant_disease_rec", label: "Please specify distribution/extent of distant disease", section: "Treatment RTX", source: "clinical_join" },
{ name: "other_xrt_type_specify_rec", label: "Please specify radiation type (free text)", section: "Treatment RTX", source: "clinical_join" },
{ name: "immune_rx", label: "Did this patient receive immunotherapy?", section: "Immune Therapy or Clinical Trial", source: "clinical_join" },
{ name: "immune_rx_dates", label: "Are immunotherapy start and end dates known?", section: "Immune Therapy or Clinical Trial", source: "clinical_join" },
{ name: "immunotherapy_start_date", label: "Immunotherapy start date", section: "Immune Therapy or Clinical Trial", source: "clinical_join" },
{ name: "immunotherapy_end_date", label: "Immunotherapy end date", section: "Immune Therapy or Clinical Trial", source: "clinical_join" },
{ name: "immunotherapy_drugs", label: "Please give immunotherapy regime description (free text)", section: "Immune Therapy or Clinical Trial", source: "clinical_join" },
{ name: "part_clinical_trial", label: "Did this patient participate in a clinical trial?", section: "Immune Therapy or Clinical Trial", source: "clinical_join" },
{ name: "part_clinical_trial_specify", label: "What is the clinical trial name?", section: "Immune Therapy or Clinical Trial", source: "clinical_join" },
{ name: "clinical_trial_drugs", label: "Which drugs are used?", section: "Immune Therapy or Clinical Trial", source: "clinical_join" },
{ name: "refhcp", label: "Is this patient referred to HCP?", section: "Hereditary Cancer Program (HCP)", source: "clinical_join" },
{ name: "hcp_apt_date", label: "What is the HCP appointment date?", section: "Hereditary Cancer Program (HCP)", source: "clinical_join" },
{ name: "lynch", label: "Lynch/HNPCC mutation identified?", section: "Hereditary Cancer Program (HCP)", source: "clinical_join" },
{ name: "mutation", label: "Please specify which mutation (free text)", section: "Hereditary Cancer Program (HCP)", source: "clinical_join" },
{ name: "brca", label: "BRCA Germline mutation identified? (pick one)", section: "Hereditary Cancer Program (HCP)", source: "clinical_join" },
{ name: "brca_specify", label: "Please specify BRCA Germline mutation (free text)", section: "Hereditary Cancer Program (HCP)", source: "clinical_join" },
{ name: "other_mut", label: "Other pathogenic mutations identified? (pick all that", section: "Hereditary Cancer Program (HCP)", source: "clinical_join" },
{ name: "other_mut_specify", label: "Please specify pathogenic mutation or variant of", section: "Hereditary Cancer Program (HCP)", source: "clinical_join" },
{ name: "surv_where", label: "Surveillance for this patient (pick one)", section: "Surveillance", source: "clinical_join" },
{ name: "surv_int_yr1", label: "Surveillance intervals first year (pick one)", section: "Surveillance", source: "clinical_join" },
{ name: "surv_int_yr1_specify", label: "Please specify surveillance intervals in the first year", section: "Surveillance", source: "clinical_join" },
{ name: "surv_int_yr2", label: "Surveillance intervals second year (pick one)", section: "Surveillance", source: "clinical_join" },
{ name: "surv_int_yr2_specify", label: "Please specify surveillance intervals in the second year", section: "Surveillance", source: "clinical_join" },
{ name: "prog_yn", label: "Did this patient have recurrence event?", section: "Follow up/RECURRENCE", source: "clinical_join", fill: {"via": "outcome", "metric": "recurrence"} },
{ name: "rec_event", label: "Recurrence event as defined by", section: "Follow up/RECURRENCE", source: "clinical_join" },
{ name: "rec_details", label: "Please provide the relevant details (free text)", section: "Follow up/RECURRENCE", source: "clinical_join" },
{ name: "rec_location", label: "Recurrence location(s) (pick all that apply)", section: "Follow up/RECURRENCE", source: "clinical_join" },
{ name: "date_prog", label: "Date of first recurrence", section: "Follow up/RECURRENCE", source: "clinical_join", fill: {"via": "outcome", "metric": "recurrence"} },
{ name: "add_prog", label: "Did this patient have second recurrence?", section: "Follow up/RECURRENCE", source: "clinical_join" },
{ name: "date_lfu", label: "Date of last contact", section: "Follow up/RECURRENCE", source: "clinical_join", fill: {"via": "outcome", "metric": "vital"} },
{ name: "status_last_seen", label: "Status at last contact (pick one)", section: "Follow up/RECURRENCE", source: "clinical_join", fill: {"via": "outcome", "metric": "vital"} },
{ name: "alive_w_morbidity", label: "Please specify types of morbidity (free text)", section: "Follow up/RECURRENCE", source: "clinical_join" },
{ name: "cause_death", label: "Cause of death", section: "Follow up/RECURRENCE", source: "clinical_join" },
{ name: "cause_death_specify", label: "Please specify intercurrent illness (e.g., breast cancer)", section: "Follow up/RECURRENCE", source: "clinical_join" },
{ name: "date_death", label: "Date of death", section: "Follow up/RECURRENCE", source: "clinical_join", fill: {"via": "outcome", "metric": "vital"} },
{ name: "comments", label: "Final comments (free text)", section: "Final Comments", source: "none" },
{ name: "date_completion", label: "Date this questionnaire is completed by clinician", section: "Final Comments", source: "none" },
{ name: "respondent_name", label: "Survey respondent's name", section: "Final Comments", source: "none" },
{ name: "tce_survey_complete", label: "Complete?", section: "Form Status", source: "none" },
];