diff --git "a/data/metadata.json" "b/data/metadata.json" --- "a/data/metadata.json" +++ "b/data/metadata.json" @@ -11,8 +11,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "11134015": { "groups": [ @@ -23,42 +22,25 @@ "source": "J Biol Chem", "url": "https://pubmed.ncbi.nlm.nih.gov/11134015/", "format": "pdf", - "uniprot_ids": [ - "Q9FAW5" - ], - "protein_names": [ - "NADPH azoreductase" - ], - "organisms": [ - "Bacillus sp. (strain OY1-2)" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MKLVVINGTPRKFGRTRVVAKYIADQFEGELYDLAIEELPLYNGEESQRDLEAVKKLKTLVKAADGVVLCTPEYHNAMSGALKNSLDYLSSSEFIHKPVALLAVAGGGKGGINALNSMHASLAGVYANAIPKQVVLDGLHVQDGELGEDAKPLIHDVVKELKAYMSVYKEVKKQLGVE" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "11583992": { "groups": [ - "azoreductases" + "azoreductases", + "escherichia_coli" ], "title": "Putative ACP phosphodiesterase gene (acpD) encodes an azoreductase.", "pub_date": "2001 Dec 7", "source": "J Biol Chem", "url": "https://pubmed.ncbi.nlm.nih.gov/11583992/", "format": "pdf", - "uniprot_ids": [ - "P41407" - ], - "protein_names": [ - "FMN-dependent NADH:quinone oxidoreductase" - ], - "organisms": [ - "Escherichia coli (strain K12)" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "12147495": { "groups": [ @@ -69,19 +51,10 @@ "source": "Appl Environ Microbiol", "url": "https://www.ncbi.nlm.nih.gov/pmc/articles/123998/", "format": "pdf", - "uniprot_ids": [ - "Q8KU07" - ], - "protein_names": [ - "NAD(P)H azoreductase" - ], - "organisms": [ - "Xenophilus azovorans" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MILVVGGTGTIGSEVVRLLQEAKLPFKALVRDAAKARELNARGVQTAAGDLREPRTLPAALGGVDKVFVVTPLVPDQVQMRAALITAAKTAGVKHFVMSTGIGAAPDSPVQIGRWLGENQQQVQESGMAWTFVQPGFFMQNLLMYAQAIREKGEFYMPLGEGKVSWIDARDIAAVAVQALTKPGHENQAYPVTGPQALSGAEVAAALSAAAGRPVRYVAITLEQAKQAMTGMGMPESLADAMNELYALAPPDYLAGVLDTVPKVTGRPARTFAEFAKAHAAAFGAA" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "12706351": { "groups": [ @@ -95,8 +68,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "14766562": { "groups": [ @@ -110,8 +82,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "15003265": { "groups": [ @@ -122,19 +93,10 @@ "source": "Protein Expr Purif", "url": "https://pubmed.ncbi.nlm.nih.gov/15003265/", "format": "pdf", - "uniprot_ids": [ - "Q831B2" - ], - "protein_names": [ - "FMN-dependent NADH:quinone oxidoreductase" - ], - "organisms": [ - "Enterococcus faecalis (strain ATCC 700802 / V583)" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MSKLLVVKAHPLTKEESRSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQKVARFNELTDQFLSADKVVIANPMWNLNVPTRLKAWVDTINVAGKTFQYTAEGPKPLTSGKKALHIQSNGGFYEGKDFASQYIKAILNFIGVDQVDGLFIEGIDHFPDRAEELLNTAMTKATEYGKTF" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "15870453": { "groups": [ @@ -145,19 +107,10 @@ "source": "Microbiology (Reading)", "url": "https://www.ncbi.nlm.nih.gov/pmc/articles/5875183/", "format": "pdf", - "uniprot_ids": [ - "Q50H63" - ], - "protein_names": [ - "FMN-dependent NADPH-azoreductase" - ], - "organisms": [ - "Staphylococcus aureus" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MKGLIIIGSAQVNSHTSALARYLTEHFKTHDIEAEIFDLAEKPLNQLDFSGTTPSIDEIKQNMKDLKEKAMAADFLILGTPNYHGSYSGILKNALDHLNMDYFKMKPVGLIGNSGGIVSSEPLSHLRVIVRSLLGIAVPTQIATHDSDFAKNEDGSYYLNDSEFQLRARLFVDQIVSFVNNSPYEHLK" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "17904577": { "groups": [ @@ -168,42 +121,25 @@ "source": "J Mol Biol", "url": "https://pubmed.ncbi.nlm.nih.gov/17904577/", "format": "pdf", - "uniprot_ids": [ - "Q9I5F3" - ], - "protein_names": [ - "FMN-dependent NAD(P)H:quinone oxidoreductase 1" - ], - "organisms": [ - "Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "18337254": { "groups": [ - "azoreductases" + "azoreductases", + "escherichia_coli" ], "title": "Expansion of substrate specificity and catalytic mechanism of azoreductase by X-ray crystallography and site-directed mutagenesis.", "pub_date": "2008 may 16", "source": "J Biol Chem", "url": "https://pubmed.ncbi.nlm.nih.gov/18337254/", "format": "pdf", - "uniprot_ids": [ - "P41407" - ], - "protein_names": [ - "FMN-dependent NADH:quinone oxidoreductase" - ], - "organisms": [ - "Escherichia coli (strain K12)" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "18791262": { "groups": [ @@ -217,8 +153,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "19666717": { "groups": [ @@ -229,19 +164,10 @@ "source": "J Bacteriol", "url": "https://pubmed.ncbi.nlm.nih.gov/19666717/", "format": "pdf", - "uniprot_ids": [ - "P41407" - ], - "protein_names": [ - "FMN-dependent NADH:quinone oxidoreductase" - ], - "organisms": [ - "Escherichia coli (strain K12)" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLAANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNISTQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTFLGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVSA" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "20057057": { "groups": [ @@ -252,19 +178,10 @@ "source": "Acta Crystallogr Sect F Struct Biol Cryst Commun", "url": "https://pubmed.ncbi.nlm.nih.gov/20057057/", "format": "pdf", - "uniprot_ids": [ - "Q9I5F3" - ], - "protein_names": [ - "FMN-dependent NAD(P)H:quinone oxidoreductase 1" - ], - "organisms": [ - "Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "20417637": { "groups": [ @@ -275,27 +192,10 @@ "source": "J Mol Biol", "url": "https://pubmed.ncbi.nlm.nih.gov/20417637/", "format": "pdf", - "uniprot_ids": [ - "Q9I5F3", - "Q9HZ17", - "Q9I2E2" - ], - "protein_names": [ - "FMN-dependent NAD(P)H:quinone oxidoreductase 1", - "FMN-dependent NADH:quinone oxidoreductase 3", - "FMN-dependent NADH:quinone oxidoreductase 2" - ], - "organisms": [ - "Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)", - "Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)", - "Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)" - ], - "n_uniprot_entries": 3, - "sequences": [ - "MSRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDNGVAQYRPLLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA", - "MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPCDGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYAGGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR", - "MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTPAELRDAALKHEVAVGEEVLEEFLAADVVVIGAPMYNFTISSQLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQPTGAAHEGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "21203919": { "groups": [ @@ -309,8 +209,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "21890348": { "groups": [ @@ -324,8 +223,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "22182443": { "groups": [ @@ -336,19 +234,10 @@ "source": "Anaerobe", "url": "https://pubmed.ncbi.nlm.nih.gov/22182443/", "format": "pdf", - "uniprot_ids": [ - "M4Q033" - ], - "protein_names": [ - "Azoreductase" - ], - "organisms": [ - "Clostridium perfringens B str. ATCC 3626" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MKVLLVNGSPNKEGCTYTALKEVSKTLEENGIDTEIFQVGNKPIGGCIGCGSCKKTGECFMKDGVNEFVEKAKDADGFVFGSPVYYAAASGSITSFLDRAFYSGGKHMAFKPGAVICSARRAGTTSTLDQLSKYLTICNMPVVSSQYWNMVHGNTPEKVKKDLEGMQTMRVLGRNMAWLIKCIELGKNNNILKPELEERERTNFIR" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "22456237": { "groups": [ @@ -362,8 +251,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "24177163": { "groups": [ @@ -377,8 +265,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "26621870": { "groups": [ @@ -392,8 +279,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "26724685": { "groups": [ @@ -404,19 +290,10 @@ "source": "Int J Biol Macromol", "url": "https://pubmed.ncbi.nlm.nih.gov/26724685/", "format": "pdf", - "uniprot_ids": [ - "A0A1W6D7D8" - ], - "protein_names": [ - "FMN dependent NADH:quinone oxidoreductase" - ], - "organisms": [ - "Halomonas elongata" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MTTRVLVLTSSILDGNSLALAEHFKTQLAGRDDVAITTRNLIADELPHLGLPELSSWQVPAGERTTEQRELAARSDALIDELQAHDVLVLAVPLYNLGIPSQMKAWFDRILRAGVTFRYTENGPQGLVEGKRAMILAARGGQYAGTELDSQTPHLKHMLGLIGITEVDTVFAEGLAMGEELHEAAMGEARQAIEGLAERL" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "27502282": { "groups": [ @@ -427,19 +304,10 @@ "source": "J Biol Chem", "url": "https://pubmed.ncbi.nlm.nih.gov/27502282/", "format": "pdf", - "uniprot_ids": [ - "Q9I4V0" - ], - "protein_names": [ - "NADH:quinone reductase" - ], - "organisms": [ - "Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MGVFRTRFTETFGVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGNDPGEHIAEFRRHGVKVIHKCTAVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALALGADAINMGTRFLATRECPIHPAVKAAIRAADERSTDLIMRSLRNTARVARNAISQEVLAIEARGGAGYADIAALVSGQRGRQVYQQGDTDLGIWSAGMVQGLIDDEPACAELLRDIVEQARQLVRQRLEGMLAGV" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "28467413": { "groups": [ @@ -453,8 +321,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "28545445": { "groups": [ @@ -468,8 +335,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "30342139": { "groups": [ @@ -483,8 +349,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "30465830": { "groups": [ @@ -498,8 +363,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "31449862": { "groups": [ @@ -513,8 +377,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "31967777": { "groups": [ @@ -525,19 +388,10 @@ "source": "ACS Chem Biol", "url": "https://www.ncbi.nlm.nih.gov/pmc/articles/7040913/", "format": "pdf", - "uniprot_ids": [ - "A0A0B0IKH9" - ], - "protein_names": [ - "FMN dependent NADH:quinone oxidoreductase" - ], - "organisms": [ - "Halalkalibacter okhensis" - ], - "n_uniprot_entries": 1, - "sequences": [ - "MTKVLYITAHPHDDTQSFSMAVGKAFIDTYKEVNPDHEVEAIDLYIEDIPHIDVDVFSGWGKLRSGQGFDQLSSDEKAKVGRLSELCEQFVSADKYIFVSPLWNFSFPPVLKAYIDSVAVAGKTFKYTEQGPVGLLTDKKALHIQARGGIYSEGPAAQMEMGHRYLSIIMQFFGVPSFDGLFVEGHNAMPDKAQEIKENAVARAKDLAHTF" - ] + "uniprot_ids": [], + "protein_names": [], + "organisms": [], + "n_uniprot_entries": 0 }, "35080802": { "groups": [ @@ -551,8 +405,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "35593146": { "groups": [ @@ -566,8 +419,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "38740275": { "groups": [ @@ -581,8 +433,7 @@ "uniprot_ids": [], "protein_names": [], "organisms": [], - "n_uniprot_entries": 0, - "sequences": [] + "n_uniprot_entries": 0 }, "718894": { "groups": [ @@ -1097,8 +948,7 @@ "15977159": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Ligand-induced fit in mycobacterial MabA: the sequence-specific C-terminus locks the conformational change.", "pub_date": "2005 Aug 15", @@ -1112,7 +962,8 @@ }, "20693992": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Biotin synthesis begins by hijacking the fatty acid synthetic pathway.", "pub_date": "2010 Sep", @@ -1427,8 +1278,7 @@ "19685079": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The essential mycobacterial genes, fabG1 and fabG4, encode 3-oxoacyl-thioester reductases that are functional in yeast mitochondrial fatty acid synthase type 2.", "pub_date": "2009 Oct", @@ -1655,8 +1505,7 @@ "25789990": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure, dynamics, and interaction of Mycobacterium tuberculosis (Mtb) DprE1 and DprE2 examined by molecular modeling, simulation, and electrostatic studies.", "pub_date": "2015", @@ -1684,8 +1533,7 @@ }, "26147157": { "groups": [ - "sdrs", - "escherichia_coli" + "sdrs" ], "title": "Rational Modulation of the Induced-Fit Conformational Change for Slow-Onset Inhibition in Mycobacterium tuberculosis InhA.", "pub_date": "2015 Aug 4", @@ -1825,7 +1673,8 @@ }, "11514139": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "1,4-Disubstituted imidazoles are potential antibacterial agents functioning as inhibitors of enoyl acyl carrier protein reductase (FabI).", "pub_date": "2001 Aug 20", @@ -2042,7 +1891,8 @@ }, "10595560": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Molecular basis for triclosan activity involves a flipping loop in the active site.", "pub_date": "1999 Nov", @@ -2444,8 +2294,7 @@ "10336454": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the Mycobacterium tuberculosis enoyl-ACP reductase, InhA, in complex with NAD+ and a C16 fatty acyl substrate.", "pub_date": "1999 May 28", @@ -2473,7 +2322,8 @@ }, "9707111": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Triclosan targets lipid synthesis.", "pub_date": "1998 Aug 6", @@ -2560,8 +2410,7 @@ "23006410": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Role of Serine140 in the mode of action of Mycobacterium tuberculosis \u03b2-ketoacyl-ACP Reductase (MabA).", "pub_date": "2012 Sep 25", @@ -2819,8 +2668,7 @@ "20178986": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation of the Mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein reductase MabA regulates mycolic acid biosynthesis.", "pub_date": "2010 Apr 23", @@ -2992,6 +2840,7 @@ "groups": [ "sdrs", "sams", + "escherichia_coli", "hsp_70", "sgtpb" ], @@ -3292,7 +3141,8 @@ }, "8910376": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Roles of the FabA and FabZ beta-hydroxyacyl-acyl carrier protein dehydratases in Escherichia coli fatty acid biosynthesis.", "pub_date": "1996 Nov 1", @@ -3391,8 +3241,7 @@ "19130456": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Triclosan derivatives: towards potent inhibitors of drug-sensitive and drug-resistant Mycobacterium tuberculosis.", "pub_date": "2009 Feb", @@ -3534,8 +3383,7 @@ "24292073": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Pyridomycin bridges the NADH- and substrate-binding pockets of the enoyl reductase InhA.", "pub_date": "2014 Feb", @@ -3862,8 +3710,7 @@ "29946302": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Advance in Research on Mycobacterium tuberculosis FabG4 and Its Inhibitor.", "pub_date": "2018", @@ -3920,8 +3767,7 @@ "25891098": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the enoyl-ACP reductase of Mycobacterium tuberculosis (InhA) in the apo-form and in complex with the active metabolite of isoniazid pre-formed by a biomimetic approach.", "pub_date": "2015 Jun", @@ -4305,7 +4151,8 @@ }, "8075395": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "The use of a hybrid genetic system to study the functional relationship between prokaryotic and plant multi-enzyme fatty acid synthetase complexes.", "pub_date": "1994 Aug", @@ -4390,8 +4237,7 @@ "26934341": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "N-Benzyl-4-((heteroaryl)methyl)benzamides: A New Class of Direct NADH-Dependent 2-trans Enoyl-Acyl Carrier Protein Reductase (InhA) Inhibitors with Antitubercular Activity.", "pub_date": "2016 Apr 5", @@ -4782,6 +4628,7 @@ "9298646": { "groups": [ "sdrs", + "escherichia_coli", "hsp_70", "sgtpb" ], @@ -4952,8 +4799,7 @@ "21980284": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "High-resolution phenotypic profiling defines genes essential for mycobacterial growth and cholesterol catabolism.", "pub_date": "2011 Sep", @@ -5240,8 +5086,7 @@ "16647717": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystallographic and pre-steady-state kinetics studies on binding of NADH to wild-type and isoniazid-resistant enoyl-ACP(CoA) reductase enzymes from Mycobacterium tuberculosis.", "pub_date": "2006 Jun 9", @@ -5353,7 +5198,8 @@ }, "1766386": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Analysis of an Erwinia chrysanthemi gene cluster involved in pectin degradation.", "pub_date": "1991 Sep", @@ -5541,6 +5387,7 @@ "18723842": { "groups": [ "sdrs", + "escherichia_coli", "hsp_70", "sgtpb" ], @@ -5740,7 +5587,8 @@ }, "17012233": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Structure of acyl carrier protein bound to FabI, the FASII enoyl reductase from Escherichia coli.", "pub_date": "2006 Dec 22", @@ -5924,8 +5772,7 @@ }, "28377529": { "groups": [ - "sdrs", - "escherichia_coli" + "sdrs" ], "title": "Catabolism of the Last Two Steroid Rings in Mycobacterium tuberculosis and Other Bacteria.", "pub_date": "2017 Apr 4", @@ -5981,7 +5828,8 @@ }, "24509771": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Escherichia coli kduD encodes an oxidoreductase that converts both sugar and steroid substrates.", "pub_date": "2014 Jun", @@ -6040,7 +5888,8 @@ }, "15016358": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Cofactor-induced conformational rearrangements establish a catalytically competent active site and a proton relay conduit in FabG.", "pub_date": "2004 Mar", @@ -6240,7 +6089,8 @@ }, "18977209": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Novel inhibitors of beta-ketoacyl-ACP reductase from Escherichia coli.", "pub_date": "2009 Mar 16", @@ -6714,8 +6564,7 @@ "27428438": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Antitubercular drugs for an old target: GSK693 as a promising InhA direct inhibitor.", "pub_date": "2016 Jun", @@ -6933,8 +6782,7 @@ "12079383": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of MabA from Mycobacterium tuberculosis, a reductase involved in long-chain fatty acid biosynthesis.", "pub_date": "2002 Jul 5", @@ -6965,8 +6813,7 @@ "12406221": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Overexpression of inhA, but not kasA, confers resistance to isoniazid and ethionamide in Mycobacterium smegmatis, M. bovis BCG and M. tuberculosis.", "pub_date": "2002 Oct", @@ -7079,8 +6926,7 @@ "24517327": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Assessing the essentiality of the decaprenyl-phospho-d-arabinofuranose pathway in Mycobacterium tuberculosis using conditional mutants.", "pub_date": "2014 Apr", @@ -7577,8 +7423,7 @@ "18155153": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis beta-ketoacyl-ACP reductase: alpha-secondary kinetic isotope effects and kinetic and equilibrium mechanisms of substrate binding.", "pub_date": "2008 Mar 1", @@ -7766,7 +7611,8 @@ }, "7920643": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Large scale bacterial gene discovery by similarity search.", "pub_date": "1994 Jun", @@ -8380,8 +8226,7 @@ "25666821": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inhibition of M. tuberculosis \u03b2-ketoacyl CoA reductase FabG4 (Rv0242c) by triazole linked polyphenol-aminobenzene hybrids: comparison with the corresponding gallate counterparts.", "pub_date": "2015 Mar 15", @@ -8409,7 +8254,8 @@ }, "4381013": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Studies on the mechanism of fatty acid synthesis. XV. Preparation and general properties of beta-ketoacyl acyl carrier protein reductase from Escherichia coli.", "pub_date": "1966 Apr 4", @@ -8990,7 +8836,8 @@ }, "11007778": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "The enoyl-[acyl-carrier-protein] reductases FabI and FabL from Bacillus subtilis.", "pub_date": "2000 Dec 22", @@ -9117,8 +8964,7 @@ }, "22283812": { "groups": [ - "sdrs", - "escherichia_coli" + "sdrs" ], "title": "Targeting InhA, the FASII enoyl-ACP reductase: SAR studies on novel inhibitor scaffolds.", "pub_date": "2012", @@ -9146,7 +8992,8 @@ }, "12535615": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Characterization of short-chain dehydrogenase/reductase homologues of Escherichia coli (YdfG) and Saccharomyces cerevisiae (YMR226C).", "pub_date": "2003 Jan 31", @@ -9439,8 +9286,7 @@ }, "25568071": { "groups": [ - "sdrs", - "escherichia_coli" + "sdrs" ], "title": "Direct inhibitors of InhA are active against Mycobacterium tuberculosis.", "pub_date": "2015 Jan 7", @@ -9853,8 +9699,7 @@ }, "19299584": { "groups": [ - "sdrs", - "escherichia_coli" + "sdrs" ], "title": "Benzothiazinones kill Mycobacterium tuberculosis by blocking arabinan synthesis.", "pub_date": "2009 May 8", @@ -10408,8 +10253,7 @@ }, "33826843": { "groups": [ - "sdrs", - "escherichia_coli" + "sdrs" ], "title": "Enzymatic \u03b2-Oxidation of the Cholesterol Side Chain in Mycobacterium tuberculosis Bifurcates Stereospecifically at Hydration of 3-Oxo-cholest-4,22-dien-24-oyl-CoA.", "pub_date": "2021 Jun 11", @@ -10524,7 +10368,6 @@ "groups": [ "sdrs", "mtuberculosis", - "escherichia_coli", "sgtpb" ], "title": "targetTB: a target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis.", @@ -11006,8 +10849,7 @@ "38986924": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv0547c, a functional oxidoreductase, supports Mycobacterium tuberculosis persistence by reprogramming host mitochondrial fatty acid metabolism.", "pub_date": "2024 Sep", @@ -11036,8 +10878,7 @@ "17588773": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystallographic studies on the binding of isonicotinyl-NAD adduct to wild-type and isoniazid resistant 2-trans-enoyl-ACP (CoA) reductase from Mycobacterium tuberculosis.", "pub_date": "2007 Sep", @@ -11109,7 +10950,8 @@ }, "21059164": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Engineering a novel c-di-GMP-binding protein for biofilm dispersal.", "pub_date": "2011 Mar", @@ -11298,7 +11140,6 @@ "groups": [ "sdrs", "mtuberculosis", - "escherichia_coli", "hsp_70", "sgtpb" ], @@ -11603,8 +11444,7 @@ }, "24527857": { "groups": [ - "sdrs", - "escherichia_coli" + "sdrs" ], "title": "A structural and energetic model for the slow-onset inhibition of the Mycobacterium tuberculosis enoyl-ACP reductase InhA.", "pub_date": "2014 Apr 18", @@ -12105,8 +11945,7 @@ "24616444": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Time-dependent diaryl ether inhibitors of InhA: structure-activity relationship studies of enzyme inhibition, antibacterial activity, and in vivo efficacy.", "pub_date": "2014 Apr", @@ -12135,8 +11974,7 @@ "12606558": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Targeting tuberculosis and malaria through inhibition of Enoyl reductase: compound activity and structural data.", "pub_date": "2003 Jun 6", @@ -12434,7 +12272,8 @@ }, "10398587": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Structural basis and mechanism of enoyl reductase inhibition by triclosan.", "pub_date": "1999 Jul 23", @@ -13316,8 +13155,7 @@ "17723305": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inhibition of the Mycobacterium tuberculosis enoyl acyl carrier protein reductase InhA by arylamides.", "pub_date": "2007 Nov 1", @@ -13657,8 +13495,7 @@ "16906155": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Transfer of a point mutation in Mycobacterium tuberculosis inhA resolves the target of isoniazid.", "pub_date": "2006 Sep", @@ -13700,7 +13537,8 @@ }, "7592873": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Enoyl-acyl carrier protein reductase (fabI) plays a determinant role in completing cycles of fatty acid elongation in Escherichia coli.", "pub_date": "1995 Nov 3", @@ -13954,7 +13792,8 @@ }, "8631920": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Inhibition of beta-ketoacyl-acyl carrier protein synthase III (FabH) by acyl-acyl carrier protein in Escherichia coli.", "pub_date": "1996 May 3", @@ -14028,8 +13867,7 @@ "20864541": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation of enoyl-acyl carrier protein reductase InhA impacts mycobacterial growth and survival.", "pub_date": "2010 Nov 26", @@ -14071,7 +13909,8 @@ }, "10201369": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Molecular basis of triclosan activity.", "pub_date": "1999 Apr 1", @@ -14232,8 +14071,7 @@ "20200152": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A slow, tight binding inhibitor of InhA, the enoyl-acyl carrier protein reductase from Mycobacterium tuberculosis.", "pub_date": "2010 May 7", @@ -14518,8 +14356,7 @@ "21143326": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation of InhA inhibits mycolic acid biosynthesis and growth of Mycobacterium tuberculosis.", "pub_date": "2010 Dec", @@ -14632,8 +14469,7 @@ "21081168": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of FabG4 from Mycobacterium tuberculosis reveals the importance of C-terminal residues in ketoreductase activity.", "pub_date": "2011 Apr", @@ -14663,7 +14499,6 @@ "groups": [ "sdrs", "mtuberculosis", - "escherichia_coli", "sgtpb" ], "title": "Prokaryotic ubiquitin-like protein (Pup) proteome of Mycobacterium tuberculosis [corrected] .", @@ -14724,7 +14559,6 @@ "groups": [ "sdrs", "mtuberculosis", - "escherichia_coli", "hsp_70", "sgtpb" ], @@ -15144,8 +14978,7 @@ "12657046": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Genes required for mycobacterial growth defined by high density mutagenesis.", "pub_date": "2003 Apr", @@ -15217,8 +15050,7 @@ "16893682": { "groups": [ "sdrs", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The acid-induced operon Rv3083-Rv3089 is required for growth of Mycobacterium tuberculosis in macrophages.", "pub_date": "2007 Jan", @@ -15330,8 +15162,7 @@ }, "17227913": { "groups": [ - "sdrs", - "escherichia_coli" + "sdrs" ], "title": "Mechanism of thioamide drug action against tuberculosis and leprosy.", "pub_date": "2007 Jan 22", @@ -15644,7 +15475,8 @@ }, "23437267": { "groups": [ - "sdrs" + "sdrs", + "escherichia_coli" ], "title": "Novel insights into E. coli's hexuronate metabolism: KduI facilitates the conversion of galacturonate and glucuronate under osmotic stress conditions.", "pub_date": "2013", @@ -16367,7 +16199,8 @@ }, "22308031": { "groups": [ - "sams" + "sams", + "escherichia_coli" ], "title": "Structural Insights into Methyltransferase KsgA Function in 30S Ribosomal Subunit Biogenesis", "pub_date": "2012 feb 3", @@ -17208,8 +17041,7 @@ "19439410": { "groups": [ "sams", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "S-Adenosyl-N-decyl-aminoethyl, a Potent Bisubstrate Inhibitor of Mycobacterium tuberculosis Mycolic Acid Methyltransferases", "pub_date": "2009 may 13", @@ -17392,8 +17224,7 @@ "16741578": { "groups": [ "sams", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Trans -cyclopropanation of mycolic acids on trehalose dimycolate suppresses Mycobacterium tuberculosis \u2013induced inflammation and virulence", "pub_date": "2006 jun 1", @@ -17422,8 +17253,7 @@ "20854656": { "groups": [ "sams", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular characterization of tlyA gene product, Rv1694 of Mycobacterium tuberculosis: A non-conventional hemolysin and a ribosomal RNA methyl transferase", "pub_date": "2010 sep 20", @@ -19637,8 +19467,7 @@ "18535659": { "groups": [ "sams", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycolic Acid Modification by the mmaA4 Gene of M. tuberculosis Modulates IL-12 Production", "pub_date": "2008 jun 6", @@ -20018,8 +19847,7 @@ "31147608": { "groups": [ "sams", - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and biochemical characterization of Rv0187, an O-methyltransferase from Mycobacterium tuberculosis", "pub_date": "2019 may 30", @@ -20187,8 +20015,7 @@ }, "32327655": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Aspartate aminotransferase Rv3722c governs aspartate-dependent nitrogen metabolism in Mycobacterium tuberculosis.", "pub_date": "2020 Apr 23", @@ -20202,8 +20029,7 @@ }, "24387047": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional characterization of DnaB helicase and its modulation by single-stranded DNA binding protein in Mycobacterium tuberculosis.", "pub_date": "2014 Feb", @@ -20217,8 +20043,7 @@ }, "33584576": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv1717 Is a Cell Wall - Associated \u03b2-Galactosidase of Mycobacterium tuberculosis That Is Involved in Biofilm Dispersion.", "pub_date": "2020", @@ -20232,8 +20057,7 @@ }, "23469198": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The PPE domain of PPE17 is responsible for its surface localization and can be used to express heterologous proteins on the mycobacterial surface.", "pub_date": "2013", @@ -20247,8 +20071,7 @@ }, "31059757": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Role of M.tuberculosis protein Rv2005c in the aminoglycosides resistance.", "pub_date": "2019 Jul", @@ -20262,8 +20085,7 @@ }, "26003725": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mutational analysis of Mycobacterium tuberculosis lysine \u025b-aminotransferase and inhibitor co-crystal structures, reveals distinct binding modes.", "pub_date": "2015 Jul 17-24", @@ -20277,8 +20099,7 @@ }, "25684576": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of EspB from the ESX-1 type VII secretion system and insights into its export mechanism.", "pub_date": "2015 Mar 3", @@ -20292,8 +20113,7 @@ }, "15850757": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "HemZ is essential for heme biosynthesis in Mycobacterium tuberculosis.", "pub_date": "2005 May", @@ -20307,8 +20127,7 @@ }, "22365933": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The role of the \u03b25-\u03b111 loop in the active-site dynamics of acylated penicillin-binding protein A from Mycobacterium tuberculosis.", "pub_date": "2012 May 18", @@ -20322,8 +20141,7 @@ }, "15723078": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of a resuscitation-promoting factor domain from Mycobacterium tuberculosis shows homology to lysozymes.", "pub_date": "2005 Mar", @@ -20337,8 +20155,7 @@ }, "19543810": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The three-dimensional structure of diaminopimelate decarboxylase from Mycobacterium tuberculosis reveals a tetrameric enzyme organisation.", "pub_date": "2009 Sep", @@ -20352,8 +20169,7 @@ }, "20386700": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A Mycobacterium tuberculosis sigma factor network responds to cell-envelope damage by the promising anti-mycobacterial thioridazine.", "pub_date": "2010 Apr 8", @@ -20367,8 +20183,7 @@ }, "18992255": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the resuscitation-promoting factor (DeltaDUF)RpfB from M. tuberculosis.", "pub_date": "2009 Jan 9", @@ -20382,8 +20197,7 @@ }, "26851205": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PE9 protein has high activity binding peptides which inhibit target cell invasion.", "pub_date": "2016 May", @@ -20397,8 +20211,7 @@ }, "11800581": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression, characterization and subcellular localization of the Mycobacterium tuberculosis PPE gene Rv1917c.", "pub_date": "2001", @@ -20412,8 +20225,7 @@ }, "9933629": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Export of recombinant Mycobacterium tuberculosis superoxide dismutase is dependent upon both information in the protein and mycobacterial export machinery. A model for studying export of leaderless proteins by pathogenic mycobacteria.", "pub_date": "1999 Feb 12", @@ -20427,8 +20239,7 @@ }, "35788051": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Recognition of specific immunogenic antigens with potential diagnostic value in multi-drug resistant Mycobacterium tuberculosis inducing humoral immunity in MDR-TB patients.", "pub_date": "2022 Sep", @@ -20442,8 +20253,7 @@ }, "19649276": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The two-domain LysX protein of Mycobacterium tuberculosis is required for production of lysinylated phosphatidylglycerol and resistance to cationic antimicrobial peptides.", "pub_date": "2009 Jul", @@ -20457,8 +20267,7 @@ }, "33868202": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Thymidylyltransferase RmlA Is Negatively Regulated by Ser/Thr Protein Kinase PknB.", "pub_date": "2021", @@ -20487,8 +20296,7 @@ }, "37498378": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An Immunoinformatics-Based Study of Mycobacterium tuberculosis Region of Difference-2 Uncharacterized Protein (Rv1987) as a Potential Subunit Vaccine Candidate for Preliminary Ex Vivo Analysis.", "pub_date": "2024 Apr", @@ -20502,8 +20310,7 @@ }, "15378760": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "CFP10 discriminates between nonacetylated and acetylated ESAT-6 of Mycobacterium tuberculosis by differential interaction.", "pub_date": "2004 Oct", @@ -20532,8 +20339,7 @@ }, "25187516": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis promotes anti-apoptotic activity of the macrophage by PtpA protein-dependent dephosphorylation of host GSK3\u03b1.", "pub_date": "2014 Oct 17", @@ -20547,8 +20353,7 @@ }, "22727744": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of the sensor domain of Mycobacterium tuberculosis PknH receptor kinase reveals a conserved binding cleft.", "pub_date": "2012 Sep 28", @@ -20562,8 +20367,7 @@ }, "22045806": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Pathway profiling in Mycobacterium tuberculosis: elucidation of cholesterol-derived catabolite and enzymes that catalyze its metabolism.", "pub_date": "2011 Dec 23", @@ -20577,8 +20381,7 @@ }, "24904584": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The PGRS Domain from PE_PGRS33 of Mycobacterium tuberculosis is Target of Humoral Immune Response in Mice and Humans.", "pub_date": "2014", @@ -20592,8 +20395,7 @@ }, "15882422": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Reduced expression of antigenic proteins MPB70 and MPB83 in Mycobacterium bovis BCG strains due to a start codon mutation in sigK.", "pub_date": "2005 Jun", @@ -20607,8 +20409,7 @@ }, "25155747": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of the Mycobacterium tuberculosis type VII secretion system chaperone EspG5 in complex with PE25-PPE41 dimer.", "pub_date": "2014 Oct", @@ -20622,8 +20423,7 @@ }, "21594640": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Peptides derived from Mycobacterium tuberculosis Rv2301 protein are involved in invasion to human epithelial cells and macrophages.", "pub_date": "2012 Jun", @@ -20637,8 +20437,7 @@ }, "12705867": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "DnaE2 polymerase contributes to in vivo survival and the emergence of drug resistance in Mycobacterium tuberculosis.", "pub_date": "2003 Apr 18", @@ -20652,8 +20451,7 @@ }, "16239227": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An unusual, His-dependent family I pyrophosphatase from Mycobacterium tuberculosis.", "pub_date": "2005 Dec 23", @@ -20667,8 +20465,7 @@ }, "20016836": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Finding of the low molecular weight inhibitors of resuscitation promoting factor enzymatic and resuscitation activity.", "pub_date": "2009 Dec 16", @@ -20682,8 +20479,7 @@ }, "16155207": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of the nuclease domain of ribonuclease III from M. tuberculosis at 2.1 A.", "pub_date": "2005 Oct", @@ -20697,8 +20493,7 @@ }, "22485172": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The promoter of Rv0560c is induced by salicylate and structurally-related compounds in Mycobacterium tuberculosis.", "pub_date": "2012", @@ -20712,8 +20507,7 @@ }, "19457863": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis Ser/Thr kinase substrate Rv2175c is a DNA-binding protein regulated by phosphorylation.", "pub_date": "2009 Jul 17", @@ -20727,8 +20521,7 @@ }, "26228622": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "RD-1 encoded EspJ protein gets phosphorylated prior to affect the growth and intracellular survival of mycobacteria.", "pub_date": "2015 Jul 31", @@ -20742,8 +20535,7 @@ }, "24108128": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis for the recognition of mycolic acid precursors by KasA, a condensing enzyme and drug target from Mycobacterium tuberculosis.", "pub_date": "2013 Nov 22", @@ -20757,8 +20549,7 @@ }, "20585630": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "EspA acts as a critical mediator of ESX1-dependent virulence in Mycobacterium tuberculosis by affecting bacterial cell wall integrity.", "pub_date": "2010 Jun 24", @@ -20772,8 +20563,7 @@ }, "17443846": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Comprehensive analysis of exported proteins from Mycobacterium tuberculosis H37Rv.", "pub_date": "2007 May", @@ -20802,8 +20592,7 @@ }, "22464736": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis WhiB1 represses transcription of the essential chaperonin GroEL2.", "pub_date": "2012 Jul", @@ -20817,8 +20606,7 @@ }, "9781881": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The effect of oxygenated mycolic acid composition on cell wall function and macrophage growth in Mycobacterium tuberculosis.", "pub_date": "1998 Sep", @@ -20832,8 +20620,7 @@ }, "20454556": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Secreted Mycobacterium tuberculosis Rv3654c and Rv3655c proteins participate in the suppression of macrophage apoptosis.", "pub_date": "2010 May 4", @@ -20847,8 +20634,7 @@ }, "19121228": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Redox biology of Mycobacterium tuberculosis H37Rv: protein-protein interaction between GlgB and WhiB1 involves exchange of thiol-disulfide.", "pub_date": "2009 Jan 5", @@ -20862,8 +20648,7 @@ }, "23463507": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis MutT1 (Rv2985) and ADPRase (Rv1700) proteins constitute a two-stage mechanism of 8-oxo-dGTP and 8-oxo-GTP detoxification and adenosine to cytidine mutation avoidance.", "pub_date": "2013 Apr 19", @@ -20877,8 +20662,7 @@ }, "20233304": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A lipoprotein modulates activity of the MtrAB two-component system to provide intrinsic multidrug resistance, cytokinetic control and cell wall homeostasis in Mycobacterium.", "pub_date": "2010 Apr", @@ -20892,8 +20676,7 @@ }, "20621636": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and characterization of Mycobacterium tuberculosis CYP144: common themes and lessons learned in the M. tuberculosis P450 enzyme family.", "pub_date": "2011 Jan", @@ -20907,8 +20690,7 @@ }, "24379404": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycothiol/mycoredoxin 1-dependent reduction of the peroxiredoxin AhpE from Mycobacterium tuberculosis.", "pub_date": "2014 Feb 21", @@ -20922,8 +20704,7 @@ }, "24586681": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "WXG100 protein superfamily consists of three subfamilies and exhibits an \u03b1-helical C-terminal conserved residue pattern.", "pub_date": "2014", @@ -20937,8 +20718,7 @@ }, "20035876": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and functional analyses of Mycobacterium tuberculosis Rv3315c-encoded metal-dependent homotetrameric cytidine deaminase.", "pub_date": "2010 Mar", @@ -20952,8 +20732,7 @@ }, "17064730": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure and computational analysis of Mycobacterium tuberculosis protein CitE suggest a novel enzymatic function.", "pub_date": "2007 Jan 12", @@ -20967,8 +20746,7 @@ }, "25260828": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural studies suggest a peptidoglycan hydrolase function for the Mycobacterium tuberculosis Tat-secreted protein Rv2525c.", "pub_date": "2014 Nov", @@ -20982,8 +20760,7 @@ }, "16271885": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis protein tyrosine phosphatase PtpB structure reveals a diverged fold and a buried active site.", "pub_date": "2005 Nov", @@ -20997,8 +20774,7 @@ }, "23848406": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "ESX-1-induced apoptosis is involved in cell-to-cell spread of Mycobacterium tuberculosis.", "pub_date": "2013 Dec", @@ -21012,8 +20788,7 @@ }, "32296172": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A mycobacterial ABC transporter mediates the uptake of hydrophilic compounds.", "pub_date": "2020 Apr", @@ -21027,8 +20802,7 @@ }, "22479467": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of novel Mt-Guab2 inhibitor series active against M. tuberculosis.", "pub_date": "2012", @@ -21042,8 +20816,7 @@ }, "19016840": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Studies on structural and functional divergence among seven WhiB proteins of Mycobacterium tuberculosis H37Rv.", "pub_date": "2009 Jan", @@ -21057,8 +20830,7 @@ }, "29559126": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biophysical and immunological characterization of the ESX-4 system ESAT-6 family proteins Rv3444c and Rv3445c from Mycobacterium tuberculosis H37Rv.", "pub_date": "2018 Mar", @@ -21072,8 +20844,7 @@ }, "22516756": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Non-acid-fastness in Mycobacterium tuberculosis \u0394kasB mutant correlates with the cell envelope electron density.", "pub_date": "2012 Jul", @@ -21087,8 +20858,7 @@ }, "24914210": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mechanism of dephosphorylation of glucosyl-3-phosphoglycerate by a histidine phosphatase.", "pub_date": "2014 Aug 1", @@ -21102,8 +20872,7 @@ }, "28054744": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of PknI from Mycobacterium tuberculosis shows an inactive, pseudokinase-like conformation.", "pub_date": "2017 Feb", @@ -21117,8 +20886,7 @@ }, "20169168": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural ordering of disordered ligand-binding loops of biotin protein ligase into active conformations as a consequence of dehydration.", "pub_date": "2010 Feb 15", @@ -21132,8 +20900,7 @@ }, "18439872": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of outer membrane proteins of Mycobacterium tuberculosis.", "pub_date": "2008 Nov", @@ -21147,8 +20914,7 @@ }, "18818197": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of active site structure in CYP121. A cytochrome P450 essential for viability of Mycobacterium tuberculosis H37Rv.", "pub_date": "2008 Nov 28", @@ -21162,8 +20928,7 @@ }, "20824060": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "DNA clasping by mycobacterial HU: the C-terminal region of HupB mediates increased specificity of DNA binding.", "pub_date": "2010 Sep 2", @@ -21177,8 +20942,7 @@ }, "25037224": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "High throughput screen identifies small molecule inhibitors specific for Mycobacterium tuberculosis phosphoserine phosphatase.", "pub_date": "2014 Sep 5", @@ -21192,8 +20956,7 @@ }, "22780904": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis WhiB4 regulates oxidative stress response to modulate survival and dissemination in vivo.", "pub_date": "2012 Sep", @@ -21207,8 +20970,7 @@ }, "33412198": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural studies on Mycobacterium tuberculosis HddA enzyme using small angle X-ray scattering and dynamics simulation techniques.", "pub_date": "2021 Feb 28", @@ -21222,8 +20984,7 @@ }, "19946376": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Bfr A from Mycobacterium tuberculosis: incorporation of selenomethionine results in cleavage and demetallation of haem.", "pub_date": "2009 Nov 25", @@ -21237,8 +20998,7 @@ }, "17174332": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure and function of a mycobacterial NHEJ DNA repair polymerase.", "pub_date": "2007 Feb 16", @@ -21252,8 +21012,7 @@ }, "25242740": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel firefly luciferase biosensor enhances the detection of apoptosis induced by ESAT-6 family proteins of Mycobacterium tuberculosis.", "pub_date": "2014 Oct 3", @@ -21267,8 +21026,7 @@ }, "18089574": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis CYP130: crystal structure, biophysical characterization, and interactions with antifungal azole drugs.", "pub_date": "2008 Feb 22", @@ -21282,8 +21040,7 @@ }, "16629667": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Modulation of Mycobacterium tuberculosis proliferation by MtrA, an essential two-component response regulator.", "pub_date": "2006 May", @@ -21297,8 +21054,7 @@ }, "16262797": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "All four Mycobacterium tuberculosis glnA genes encode glutamine synthetase activities but only GlnA1 is abundantly expressed and essential for bacterial homeostasis.", "pub_date": "2005 Nov", @@ -21312,8 +21068,7 @@ }, "25847237": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis TlyA Protein Negatively Regulates T Helper (Th) 1 and Th17 Differentiation and Promotes Tuberculosis Pathogenesis.", "pub_date": "2015 Jun 5", @@ -21341,8 +21096,7 @@ }, "23615910": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis polyketide synthase 11 (PKS11) reveals intermediates in the synthesis of methyl-branched alkylpyrones.", "pub_date": "2013 Jun 7", @@ -21356,8 +21110,7 @@ }, "16325768": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv2131c gene product: an unconventional enzyme that is both inositol monophosphatase and fructose-1,6-bisphosphatase.", "pub_date": "2006 Jan 20", @@ -21371,8 +21124,7 @@ }, "23011806": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of the Rv0301-Rv0300 VapBC-3 toxin-antitoxin complex from M. tuberculosis reveals a Mg\u00b2\u207a ion in the active site and a putative RNA-binding site.", "pub_date": "2012 Nov", @@ -21386,8 +21138,7 @@ }, "12939264": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A cadmium-lead-sensing ArsR-SmtB repressor with novel sensory sites. Complementary metal discrimination by NmtR AND CmtR in a common cytosol.", "pub_date": "2003 Nov 7", @@ -21401,8 +21152,7 @@ }, "29530985": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The transpeptidase PbpA and noncanonical transglycosylase RodA of Mycobacterium tuberculosis play important roles in regulating bacterial cell lengths.", "pub_date": "2018 Apr 27", @@ -21416,8 +21166,7 @@ }, "22880033": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The two PPX-GppA homologues from Mycobacterium tuberculosis have distinct biochemical activities.", "pub_date": "2012", @@ -21431,8 +21180,7 @@ }, "32092417": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical and biophysical characterization of nucleotide binding domain of Trehalose transporter from Mycobacterium tuberculosis.", "pub_date": "2020 Jun 1", @@ -21446,8 +21194,7 @@ }, "10375643": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning and characterization of a bifunctional RelA/SpoT homologue from Mycobacterium tuberculosis.", "pub_date": "1999 Jun 11", @@ -21461,8 +21208,7 @@ }, "17157300": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural diversity in the six-fold redundant set of acyl-CoA carboxyltransferases in Mycobacterium tuberculosis.", "pub_date": "2006 Dec 22", @@ -21476,8 +21222,7 @@ }, "15322293": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Substrate-induced asymmetry and channel closure revealed by the apoenzyme structure of Mycobacterium tuberculosis phosphopantetheine adenylyltransferase.", "pub_date": "2004 Sep", @@ -21491,8 +21236,7 @@ }, "11006082": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inorganic Polyphosphate/ATP-NAD kinase of Micrococcus flavus and Mycobacterium tuberculosis H37Rv.", "pub_date": "2000 Sep 16", @@ -21506,8 +21250,7 @@ }, "10879539": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A small-molecule nitroimidazopyran drug candidate for the treatment of tuberculosis.", "pub_date": "2000 Jun 22", @@ -21521,8 +21264,7 @@ }, "19276084": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insight into the heme-based redox sensing by DosS from Mycobacterium tuberculosis.", "pub_date": "2009 May 8", @@ -21536,8 +21278,7 @@ }, "33772870": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cyclic di-GMP sensing histidine kinase PdtaS controls mycobacterial adaptation to carbon sources.", "pub_date": "2021 Apr", @@ -21551,8 +21292,7 @@ }, "10869356": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Activation of the pro-drug ethionamide is regulated in mycobacteria.", "pub_date": "2000 Sep 8", @@ -21566,8 +21306,7 @@ }, "31034693": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Dissecting the membrane lipid binding properties and lipase activity of Mycobacterium\u00a0tuberculosis LipY domains.", "pub_date": "2019 Aug", @@ -21581,8 +21320,7 @@ }, "23143285": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The expression of ABC efflux pump, Rv1217c-Rv1218c, and its association with multidrug resistance of Mycobacterium tuberculosis in China.", "pub_date": "2013 Mar", @@ -21596,8 +21334,7 @@ }, "19140873": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis 38-kDa lipoprotein is apoptogenic for human monocyte-derived macrophages.", "pub_date": "2009 Jan", @@ -21611,8 +21348,7 @@ }, "17942407": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of a full-length response regulator from Mycobacterium tuberculosis in a stabilized three-dimensional domain-swapped, activated state.", "pub_date": "2007 Dec 28", @@ -21626,8 +21362,7 @@ }, "26801203": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of differential pore-forming activities of ESAT-6 proteins from Mycobacterium tuberculosis and Mycobacterium smegmatis.", "pub_date": "2016 Feb", @@ -21641,8 +21376,7 @@ }, "17126561": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional phosphoglucose isomerase from Mycobacterium tuberculosis H37Rv: rapid purification with high yield and purity.", "pub_date": "2007 Apr", @@ -21656,8 +21390,7 @@ }, "18815415": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of Mycobacterium tuberculosis S-adenosyl-L-homocysteine hydrolase in ternary complex with substrate and inhibitors.", "pub_date": "2008 Dec", @@ -21671,8 +21404,7 @@ }, "24204276": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis type VII secreted effector EsxH targets host ESCRT to impair trafficking.", "pub_date": "2013 Oct", @@ -21686,8 +21418,7 @@ }, "26469317": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structural basis for Rv0315, an immunostimulatory antigen and inactive beta-1,3-glucanase of Mycobacterium tuberculosis.", "pub_date": "2015 Oct 15", @@ -21701,8 +21432,7 @@ }, "24631199": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Increased virulence of Mycobacterium tuberculosis H37Rv overexpressing LipY in a murine model.", "pub_date": "2014 May", @@ -21730,8 +21460,7 @@ }, "17599915": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "NMR structural analysis of cadmium sensing by winged helix repressor CmtR.", "pub_date": "2007 Oct 12", @@ -21745,8 +21474,7 @@ }, "15001577": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The role of MmpL8 in sulfatide biogenesis and virulence of Mycobacterium tuberculosis.", "pub_date": "2004 May 14", @@ -21760,8 +21488,7 @@ }, "25869294": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression, Purification and Characterisation of Secreted Esterase Rv2525c from Mycobacterium tuberculosis.", "pub_date": "2015 May", @@ -21775,8 +21502,7 @@ }, "19680450": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis WhiB3 maintains redox homeostasis by regulating virulence lipid anabolism to modulate macrophage response.", "pub_date": "2009 Aug", @@ -21790,8 +21516,7 @@ }, "30289389": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Multiple serine transposase dimers assemble the transposon-end synaptic complex during IS607-family transposition.", "pub_date": "2018 Oct 5", @@ -21805,8 +21530,7 @@ }, "31201321": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The hydrolase LpqI primes mycobacterial peptidoglycan recycling.", "pub_date": "2019 Jun 14", @@ -21820,8 +21544,7 @@ }, "7877174": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "X-ray structure analysis of the iron-dependent superoxide dismutase from Mycobacterium tuberculosis at 2.0 Angstroms resolution reveals novel dimer-dimer interactions.", "pub_date": "1995 Mar 3", @@ -21835,8 +21558,7 @@ }, "10089161": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning, expression and significance of MPT53 for identification of secreted proteins of Mycobacterium tuberculosis.", "pub_date": "1999 Apr", @@ -21850,8 +21572,7 @@ }, "28377293": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Insights into Substrate Modification by Dehydratases from Type I Polyketide Synthases.", "pub_date": "2017 May 19", @@ -21865,8 +21586,7 @@ }, "19436070": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Pks13/FadD32 crosstalk for the biosynthesis of mycolic acids in Mycobacterium tuberculosis.", "pub_date": "2009 Jul 17", @@ -21880,8 +21600,7 @@ }, "17328726": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The RD1-encoded antigen Rv3872 of Mycobacterium tuberculosis as a potential candidate for serodiagnosis of tuberculosis.", "pub_date": "2007 Feb", @@ -21895,8 +21614,7 @@ }, "31471317": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and functional evidence that lipoprotein LpqN supports cell envelope biogenesis in Mycobacterium tuberculosis.", "pub_date": "2019 Oct 25", @@ -21910,8 +21628,7 @@ }, "17303474": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The role of GlnD in ammonia assimilation in Mycobacterium tuberculosis.", "pub_date": "2007 Jul", @@ -21925,8 +21642,7 @@ }, "35338694": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The mycobacterial guaB1 gene encodes a guanosine 5'-monophosphate reductase with a cystathionine-\u03b2-synthase domain.", "pub_date": "2022 Sep", @@ -21940,8 +21656,7 @@ }, "7557482": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Amplification and cloning of the Mycobacterium tuberculosis dnaA gene.", "pub_date": "1995 Sep 22", @@ -21955,8 +21670,7 @@ }, "19276083": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PapA3 is an acyltransferase required for polyacyltrehalose biosynthesis in Mycobacterium tuberculosis.", "pub_date": "2009 May 8", @@ -21970,8 +21684,7 @@ }, "19651141": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Ligand-induced structural transitions, mutational analysis, and 'open' quaternary structure of the M. tuberculosis feast/famine regulatory protein (Rv3291c).", "pub_date": "2009 Oct 2", @@ -21985,8 +21698,7 @@ }, "18463693": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A mycobacterial enzyme essential for cell division synergizes with resuscitation-promoting factor.", "pub_date": "2008 Feb 29", @@ -22000,8 +21712,7 @@ }, "17892498": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Protein kinase E of Mycobacterium tuberculosis has a role in the nitric oxide stress response and apoptosis in a human macrophage model of infection.", "pub_date": "2008 Feb", @@ -22015,8 +21726,7 @@ }, "11554794": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Rv2118c: an AdoMet-dependent methyltransferase from Mycobacterium tuberculosis H37Rv.", "pub_date": "2001 Sep 14", @@ -22030,8 +21740,7 @@ }, "24705740": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Propionate represses the dnaA gene via the methylcitrate pathway-regulating transcription factor, PrpR, in Mycobacterium tuberculosis.", "pub_date": "2014 May", @@ -22045,8 +21754,7 @@ }, "12101218": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction between FtsZ and FtsW of Mycobacterium tuberculosis.", "pub_date": "2002 Jul 12", @@ -22060,8 +21768,7 @@ }, "21255731": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of a preternary complex involving a prokaryotic NHEJ DNA polymerase.", "pub_date": "2011 Jan 21", @@ -22075,8 +21782,7 @@ }, "26440283": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis IMPDH in Complexes with Substrates, Products and Antitubercular Compounds.", "pub_date": "2015", @@ -22090,8 +21796,7 @@ }, "20507595": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical characterization of the maltokinase from Mycobacterium bovis BCG.", "pub_date": "2010 May 27", @@ -22105,8 +21810,7 @@ }, "20826214": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv1090 and Rv1987 encode functional \u03b2-glucan-targeting proteins.", "pub_date": "2011 Feb", @@ -22120,8 +21824,7 @@ }, "18977756": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Solution structure and refolding of the Mycobacterium tuberculosis pentapeptide repeat protein MfpA.", "pub_date": "2008 Dec 26", @@ -22135,8 +21838,7 @@ }, "10812229": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Isolation, purification and immunological characterization of novel low molecular weight protein antigen CFP 6 from culture filtrate of M. tuberculosis.", "pub_date": "2000 Jun 15", @@ -22150,8 +21852,7 @@ }, "19496931": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel role of Wag31 in protection of mycobacteria under oxidative stress.", "pub_date": "2009 Jul", @@ -22165,8 +21866,7 @@ }, "11796724": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis hemoglobin HbO associates with membranes and stimulates cellular respiration of recombinant Escherichia coli.", "pub_date": "2002 May 3", @@ -22194,8 +21894,7 @@ }, "16672241": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of Mycobacterium tuberculosis adenylate kinase in complex with two molecules of ADP and Mg2+ supports an associative mechanism for phosphoryl transfer.", "pub_date": "2006 Jun", @@ -22209,8 +21908,7 @@ }, "16984394": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "7,8-Diaminoperlargonic acid aminotransferase from Mycobacterium tuberculosis, a potential therapeutic target. Characterization and inhibition studies.", "pub_date": "2006 Oct", @@ -22224,8 +21922,7 @@ }, "14985346": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical and genetic analysis of the four DNA ligases of mycobacteria.", "pub_date": "2004 May 14", @@ -22239,8 +21936,7 @@ }, "22194604": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Elucidation and chemical modulation of sulfolipid-1 biosynthesis in Mycobacterium tuberculosis.", "pub_date": "2012 Mar 9", @@ -22254,8 +21950,7 @@ }, "17095513": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Execution of macrophage apoptosis by PE_PGRS33 of Mycobacterium tuberculosis is mediated by Toll-like receptor 2-dependent release of tumor necrosis factor-alpha.", "pub_date": "2007 Jan 12", @@ -22269,8 +21964,7 @@ }, "18799456": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cysteine synthase (CysM) of Mycobacterium tuberculosis is an O-phosphoserine sulfhydrylase: evidence for an alternative cysteine biosynthesis pathway in mycobacteria.", "pub_date": "2008 Nov 14", @@ -22284,8 +21978,7 @@ }, "18255326": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Increased sulfate uptake by E. coli overexpressing the SLC26-related SulP protein Rv1739c from Mycobacterium tuberculosis.", "pub_date": "2008 Mar", @@ -22299,8 +21992,7 @@ }, "27939941": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Toxin-Antitoxin System DarTG Catalyzes Reversible ADP-Ribosylation of DNA.", "pub_date": "2016 Dec 15", @@ -22314,8 +22006,7 @@ }, "16201014": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction between polyketide synthase and transporter suggests coupled synthesis and export of virulence lipid in M. tuberculosis.", "pub_date": "2005 Sep", @@ -22329,8 +22020,7 @@ }, "20541977": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Individual Mycobacterium tuberculosis universal stress protein homologues are dispensable in vitro.", "pub_date": "2010 Jul", @@ -22344,8 +22034,7 @@ }, "25978362": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of Rv3852 as an Agrimophol-Binding Protein in Mycobacterium tuberculosis.", "pub_date": "2015", @@ -22359,8 +22048,7 @@ }, "12435731": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Atomic structure of Mycobacterium tuberculosis CYP121 to 1.06 A reveals novel features of cytochrome P450.", "pub_date": "2003 Feb 14", @@ -22374,8 +22062,7 @@ }, "27590338": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Ser/Thr Phosphorylation Regulates the Fatty Acyl-AMP Ligase Activity of FadD32, an Essential Enzyme in Mycolic Acid Biosynthesis.", "pub_date": "2016 Oct 21", @@ -22389,8 +22076,7 @@ }, "23240649": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel F(420) -dependent anti-oxidant mechanism protects Mycobacterium tuberculosis against oxidative stress and bactericidal agents.", "pub_date": "2013 Feb", @@ -22404,8 +22090,7 @@ }, "26396194": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural Basis for the Regulation of the MmpL Transporters of Mycobacterium tuberculosis.", "pub_date": "2015 Nov 20", @@ -22419,8 +22104,7 @@ }, "20498855": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of the interaction and cross-regulation of three Mycobacterium tuberculosis RelBE modules.", "pub_date": "2010 May 17", @@ -22434,8 +22118,7 @@ }, "12930994": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of mycothiol synthase (Rv0819) from Mycobacterium tuberculosis shows structural homology to the GNAT family of N-acetyltransferases.", "pub_date": "2003 Sep", @@ -22464,8 +22147,7 @@ }, "21370306": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of calcium dodecin (Rv0379), from Mycobacterium tuberculosis with a unique calcium-binding site.", "pub_date": "2011 May", @@ -22479,8 +22161,7 @@ }, "26260636": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Two distinct conformational states of Mycobacterium\u00a0tuberculosis virulent factor early secreted antigenic target 6\u00a0kDa are behind the discrepancy around its biological functions.", "pub_date": "2015 Nov", @@ -22494,8 +22175,7 @@ }, "11279114": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Analysis of the phthiocerol dimycocerosate locus of Mycobacterium tuberculosis. Evidence that this lipid is involved in the cell wall permeability barrier.", "pub_date": "2001 Jun 8", @@ -22509,8 +22189,7 @@ }, "18304579": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Three-dimensional structures of apo- and holo-L-alanine dehydrogenase from Mycobacterium tuberculosis reveal conformational changes upon coenzyme binding.", "pub_date": "2008 Apr 4", @@ -22524,8 +22203,7 @@ }, "29888212": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "MptpB Promotes Mycobacteria Survival by Inhibiting the Expression of Inflammatory Mediators and Cell Apoptosis in Macrophages.", "pub_date": "2018", @@ -22539,8 +22217,7 @@ }, "37026388": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of FadA2 thiolase from Mycobacterium tuberculosis and prediction of its substrate specificity and membrane-anchoring properties.", "pub_date": "2023 Aug", @@ -22554,8 +22231,7 @@ }, "24530527": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The PGRS domain is responsible for translocation of PE_PGRS30 to cell poles while the PE and the C-terminal domains localize it to the cell wall.", "pub_date": "2014 Mar 18", @@ -22569,8 +22245,7 @@ }, "17600145": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "DosT and DevS are oxygen-switched kinases in Mycobacterium tuberculosis.", "pub_date": "2007 Aug", @@ -22584,8 +22259,7 @@ }, "25645924": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of Mycobacterium tuberculosis EsxA membrane insertion: roles of N- and C-terminal flexible arms and central helix-turn-helix motif.", "pub_date": "2015 Mar 13", @@ -22599,8 +22273,7 @@ }, "23779105": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "para-Aminosalicylic acid is a prodrug targeting dihydrofolate reductase in Mycobacterium tuberculosis.", "pub_date": "2013 Aug 9", @@ -22614,8 +22287,7 @@ }, "22560731": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis very-long-chain fatty acyl-CoA synthetase: structural basis for housing lipid substrates longer than the enzyme.", "pub_date": "2012 Jun 6", @@ -22629,8 +22301,7 @@ }, "25999286": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The mycobacterial PhoH2 proteins are type II toxin antitoxins coupled to RNA helicase domains.", "pub_date": "2015 Jul", @@ -22644,8 +22315,7 @@ }, "19917297": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Unusual diheme conformation of the heme-degrading protein from Mycobacterium tuberculosis.", "pub_date": "2010 Jan 22", @@ -22659,8 +22329,7 @@ }, "21920450": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Potential of Mycobacterium tuberculosis resuscitation-promoting factors as antigens in novel tuberculosis sub-unit vaccines.", "pub_date": "2012 Jan", @@ -22674,8 +22343,7 @@ }, "15456792": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a new member of the flavoprotein disulfide reductase family of enzymes from Mycobacterium tuberculosis.", "pub_date": "2004 Dec 10", @@ -22689,8 +22357,7 @@ }, "26177502": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Heterogeneity among Homologs of Cutinase-Like Protein Cut5 in Mycobacteria.", "pub_date": "2015", @@ -22704,8 +22371,7 @@ }, "24349169": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv0132c of Mycobacterium tuberculosis encodes a coenzyme F420-dependent hydroxymycolic acid dehydrogenase.", "pub_date": "2013", @@ -22719,8 +22385,7 @@ }, "23613759": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide and N-benzyl-6',7'-dihydrospiro[piperidine-4,4'-thieno[3,2-c]pyran] analogues with bactericidal efficacy against Mycobacterium tuberculosis targeting MmpL3.", "pub_date": "2013", @@ -22734,8 +22399,7 @@ }, "19114043": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The FHA-containing protein GarA acts as a phosphorylation-dependent molecular switch in mycobacterial signaling.", "pub_date": "2009 Jan 22", @@ -22749,8 +22413,7 @@ }, "16984393": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and thermodynamic insights into the binding mode of five novel inhibitors of lumazine synthase from Mycobacterium tuberculosis.", "pub_date": "2006 Oct", @@ -22764,8 +22427,7 @@ }, "34644596": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional analysis and enzyme characterization of mannose-1-phosphate guanylyl transferase (ManB) from Mycobacterium tuberculosis.", "pub_date": "2022 Jan-Feb", @@ -22779,8 +22441,7 @@ }, "23261599": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure-guided discovery of phenyl-diketo acids as potent inhibitors of M. tuberculosis malate synthase.", "pub_date": "2012 Dec 21", @@ -22794,8 +22455,7 @@ }, "24855650": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a Mycobacterium tuberculosis nanocompartment and its potential cargo proteins.", "pub_date": "2014 Jun 27", @@ -22809,8 +22469,7 @@ }, "12001234": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "X-ray structure of Mycobacterium tuberculosis nucleoside diphosphate kinase.", "pub_date": "2002 Jun 1", @@ -22824,8 +22483,7 @@ }, "25689444": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Corrigendum: Direct extracellular interaction between the early secreted antigen ESAT-6 of Mycobacterium tuberculosis and TLR2 inhibits TLR signaling in macrophages.", "pub_date": "2015 Mar", @@ -22839,8 +22497,7 @@ }, "15292265": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular dissection of the role of two methyltransferases in the biosynthesis of phenolglycolipids and phthiocerol dimycoserosate in the Mycobacterium tuberculosis complex.", "pub_date": "2004 Oct 8", @@ -22854,8 +22511,7 @@ }, "19478878": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis universal stress protein Rv2623 regulates bacillary growth by ATP-Binding: requirement for establishing chronic persistent infection.", "pub_date": "2009 May", @@ -22869,8 +22525,7 @@ }, "22264515": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis inhibits neutrophil apoptosis, leading to delayed activation of naive CD4 T cells.", "pub_date": "2012 Jan 19", @@ -22884,8 +22539,7 @@ }, "19700407": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interdomain communication in the Mycobacterium tuberculosis environmental phosphatase Rv1364c.", "pub_date": "2009 Oct 23", @@ -22899,8 +22553,7 @@ }, "11823459": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The antituberculosis drug ethionamide is activated by a flavoprotein monooxygenase.", "pub_date": "2002 Apr 12", @@ -22914,8 +22567,7 @@ }, "24161676": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Kinetic and mechanistic characterization of the glyceraldehyde 3-phosphate dehydrogenase from Mycobacterium tuberculosis.", "pub_date": "2013 Dec", @@ -22929,8 +22581,7 @@ }, "17804126": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A mutant of Mycobacterium tuberculosis lacking the 19-kDa lipoprotein Rv3763 is highly attenuated in vivo but retains potent vaccinogenic properties.", "pub_date": "2007 Oct 10", @@ -22944,8 +22595,7 @@ }, "19682254": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "ESX-1 secreted virulence factors are recognized by multiple cytosolic AAA ATPases in pathogenic mycobacteria.", "pub_date": "2009 Sep", @@ -22959,8 +22609,7 @@ }, "23923000": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Secreted acid phosphatase (SapM) of Mycobacterium tuberculosis is indispensable for arresting phagosomal maturation and growth of the pathogen in guinea pig tissues.", "pub_date": "2013", @@ -22974,8 +22623,7 @@ }, "27683242": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Kinetic and mutational studies of the adenosine diphosphate ribose hydrolase from Mycobacterium tuberculosis.", "pub_date": "2016 Dec", @@ -22989,8 +22637,7 @@ }, "22000520": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insight into the Mycobacterium tuberculosis Rv0020c protein and its interaction with the PknB kinase.", "pub_date": "2011 Oct 12", @@ -23004,8 +22651,7 @@ }, "35175508": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A Phagosomally Expressed Gene, rv0428c, of Mycobacterium tuberculosis Demonstrates Acetyl Transferase Activity and Plays a Protective Role Under Stress Conditions.", "pub_date": "2022 Apr", @@ -23019,8 +22665,7 @@ }, "15753099": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure and function of carbonic anhydrases from Mycobacterium tuberculosis.", "pub_date": "2005 May 13", @@ -23034,8 +22679,7 @@ }, "27818650": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional Characterization of PknI-Rv2159c Interaction in Redox Homeostasis of Mycobacterium tuberculosis.", "pub_date": "2016", @@ -23049,8 +22693,7 @@ }, "12161746": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Aminoglycoside 2'-N-acetyltransferase from Mycobacterium tuberculosis in complex with coenzyme A and aminoglycoside substrates.", "pub_date": "2002 Sep", @@ -23064,8 +22707,7 @@ }, "23383323": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The PE16 (Rv1430) of Mycobacterium tuberculosis is an esterase belonging to serine hydrolase superfamily of proteins.", "pub_date": "2013", @@ -23079,8 +22721,7 @@ }, "15276840": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the Mycobacterium tuberculosis dUTPase: insights into the catalytic mechanism.", "pub_date": "2004 Aug 6", @@ -23094,8 +22735,7 @@ }, "15269221": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel fold revealed by Mycobacterium tuberculosis NAD kinase, a key allosteric enzyme in NADP biosynthesis.", "pub_date": "2004 Sep 24", @@ -23109,8 +22749,7 @@ }, "24615888": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the Mycobacterium tuberculosis phosphate binding protein PstS3.", "pub_date": "2014 Sep", @@ -23124,8 +22763,7 @@ }, "21423706": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation of Mycobacterium tuberculosis Ser/Thr phosphatase by PknA and PknB.", "pub_date": "2011 Mar 9", @@ -23139,8 +22777,7 @@ }, "12581360": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction of the sensor module of Mycobacterium tuberculosis H37Rv KdpD with members of the Lpr family.", "pub_date": "2003 Feb", @@ -23154,8 +22791,7 @@ }, "27129781": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE_PGRS30 of Mycobacterium tuberculosis mediates suppression of proinflammatory immune response in macrophages through its PGRS and PE domains.", "pub_date": "2016 Sep", @@ -23169,8 +22805,7 @@ }, "19602152": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PPE and PE_PGRS proteins of Mycobacterium marinum are transported via the type VII secretion system ESX-5.", "pub_date": "2009 Aug", @@ -23184,8 +22819,7 @@ }, "20026069": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A bacterial transcription terminator with inefficient molecular motor action but with a robust transcription termination function.", "pub_date": "2010 Feb 5", @@ -23199,8 +22833,7 @@ }, "17240207": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv3389C from Mycobacterium tuberculosis, a member of the (R)-specific hydratase/dehydratase family.", "pub_date": "2007 Feb", @@ -23214,8 +22847,7 @@ }, "30192424": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE_PGRS3 of Mycobacterium tuberculosis is specifically expressed at low phosphate concentration, and its arginine-rich C-terminal domain mediates adhesion and persistence in host tissues when expressed in Mycobacterium smegmatis.", "pub_date": "2018 Dec", @@ -23229,8 +22861,7 @@ }, "12454011": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Enzymatic and structural analysis of inhibitors designed against Mycobacterium tuberculosis thymidylate kinase. New insights into the phosphoryl transfer mechanism.", "pub_date": "2003 Feb 14", @@ -23244,8 +22875,7 @@ }, "22099420": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The \u03b2-propeller gene Rv1057 of Mycobacterium tuberculosis has a complex promoter directly regulated by both the MprAB and TrcRS two-component systems.", "pub_date": "2011 Dec", @@ -23259,8 +22889,7 @@ }, "31846718": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and DNA binding properties of mycobacterial integration host factor mIHF.", "pub_date": "2020 Mar 1", @@ -23274,8 +22903,7 @@ }, "12694625": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv3133c/dosR is a transcription factor that mediates the hypoxic response of Mycobacterium tuberculosis.", "pub_date": "2003 May", @@ -23289,8 +22917,7 @@ }, "16956367": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis possesses a functional enzyme for the synthesis of vitamin C, L-gulono-1,4-lactone dehydrogenase.", "pub_date": "2006 Oct", @@ -23304,8 +22931,7 @@ }, "16691317": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The phosphoenolpyruvate carboxykinase of Mycobacterium tuberculosis induces strong cell-mediated immune responses in mice.", "pub_date": "2006 Aug", @@ -23319,8 +22945,7 @@ }, "21220116": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural characterization of the multidomain regulatory protein Rv1364c from Mycobacterium tuberculosis.", "pub_date": "2011 Jan 12", @@ -23334,8 +22959,7 @@ }, "16139296": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of the Mycobacterium tuberculosis flavin dependent thymidylate synthase (MtbThyX) at 2.0A resolution.", "pub_date": "2005 Oct 7", @@ -23349,8 +22973,7 @@ }, "15713483": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of a substrate complex of Mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein synthase III (FabH) with lauroyl-coenzyme A.", "pub_date": "2005 Mar 11", @@ -23364,8 +22987,7 @@ }, "15479239": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "X-ray structure of peptidyl-prolyl cis-trans isomerase A from Mycobacterium tuberculosis.", "pub_date": "2004 Oct", @@ -23379,8 +23001,7 @@ }, "14871480": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Multiple thioredoxin-mediated routes to detoxify hydroperoxides in Mycobacterium tuberculosis.", "pub_date": "2004 Mar 1", @@ -23394,8 +23015,7 @@ }, "21134129": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular characterization of secretory proteins Rv3619c and Rv3620c from Mycobacterium tuberculosis H37Rv.", "pub_date": "2011 Jan", @@ -23409,8 +23029,7 @@ }, "25967101": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "CtpA, a putative Mycobacterium tuberculosis P-type ATPase, is stimulated by copper (I) in the mycobacterial plasma membrane.", "pub_date": "2015 Aug", @@ -23424,8 +23043,7 @@ }, "39231966": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inducible auto-phosphorylation regulates a widespread family of nucleotidyltransferase toxins.", "pub_date": "2024 Sep 4", @@ -23439,8 +23057,7 @@ }, "25430994": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis for targeting the ribosomal protein S1 of Mycobacterium tuberculosis by pyrazinamide.", "pub_date": "2015 Mar", @@ -23454,8 +23071,7 @@ }, "26048138": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Differentially Activates cGAS- and Inflammasome-Dependent Intracellular Immune Responses through ESX-1.", "pub_date": "2015 Jun 10", @@ -23469,8 +23085,7 @@ }, "22291682": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis RNA Expression Patterns in Sputum Bacteria Indicate Secreted Esx Factors Contributing to Growth are Highly Expressed in Active Disease.", "pub_date": "2011", @@ -23484,8 +23099,7 @@ }, "25586105": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PPE57 induces activation of macrophages and drives Th1-type immune responses through TLR2.", "pub_date": "2015 Jun", @@ -23499,8 +23113,7 @@ }, "19101553": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The C-terminal of CysM from Mycobacterium tuberculosis protects the aminoacrylate intermediate and is involved in sulfur donor selectivity.", "pub_date": "2009 Jan 22", @@ -23514,8 +23127,7 @@ }, "30937925": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE_PGRS62 promotes the survival of Mycobacterium smegmatis within macrophages via disrupting ER stress-mediated apoptosis.", "pub_date": "2019 Nov", @@ -23529,8 +23141,7 @@ }, "15059632": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis Rv2358-furB operon is induced by zinc.", "pub_date": "2004 Apr", @@ -23544,8 +23155,7 @@ }, "21494619": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Ferritin structure from Mycobacterium tuberculosis: comparative study with homologues identifies extended C-terminus involved in ferroxidase activity.", "pub_date": "2011 Apr 8", @@ -23560,7 +23170,6 @@ "20705052": { "groups": [ "mtuberculosis", - "escherichia_coli", "sgtpb" ], "title": "Characterization of a chromosomal toxin-antitoxin, Rv1102c-Rv1103c system in Mycobacterium tuberculosis.", @@ -23575,8 +23184,7 @@ }, "22108166": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural studies of Mycobacterium tuberculosis Rv0899 reveal a monomeric membrane-anchoring protein with two separate domains.", "pub_date": "2012 Jan 13", @@ -23590,8 +23198,7 @@ }, "21698192": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A histone-like protein of mycobacteria possesses ferritin superfamily protein-like activity and protects against DNA damage by Fenton reaction.", "pub_date": "2011", @@ -23605,8 +23212,7 @@ }, "18289677": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Flagellin as a good carrier and potent adjuvant for Th1 response: study of mice immune response to the p27 (Rv2108) Mycobacterium tuberculosis antigen.", "pub_date": "2008 May", @@ -23620,8 +23226,7 @@ }, "26258286": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Two enzymes with redundant fructose bisphosphatase activity sustain gluconeogenesis and virulence in Mycobacterium tuberculosis.", "pub_date": "2015 Aug 10", @@ -23635,8 +23240,7 @@ }, "20444687": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of full-length Mycobacterium tuberculosis H37Rv glycogen branching enzyme: insights of N-terminal beta-sandwich in substrate specificity and enzymatic activity.", "pub_date": "2010 Jul 2", @@ -23650,8 +23254,7 @@ }, "26904001": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Eukaryotic-Type Ser/Thr Protein Kinase Mediated Phosphorylation of Mycobacterial Phosphodiesterase Affects its Localization to the Cell Wall.", "pub_date": "2016", @@ -23665,8 +23268,7 @@ }, "25412183": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Succinate dehydrogenase is the regulator of respiration in Mycobacterium tuberculosis.", "pub_date": "2014 Nov", @@ -23680,8 +23282,7 @@ }, "28977726": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Target DNA stabilizes Mycobacterium tuberculosis DevR/DosR phosphorylation by the full-length oxygen sensors DevS/DosS and DosT.", "pub_date": "2017 Nov", @@ -23695,8 +23296,7 @@ }, "9490054": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Engineering a change in metal-ion specificity of the iron-dependent superoxide dismutase from Mycobacterium tuberculosis-- X-ray structure analysis of site-directed mutants.", "pub_date": "1998 Feb 1", @@ -23710,8 +23310,7 @@ }, "20852636": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure and mechanism of the Mycobacterium tuberculosis cyclodityrosine synthetase.", "pub_date": "2010 Nov", @@ -23725,8 +23324,7 @@ }, "21295603": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis mtrA merodiploid strains with point mutations in the signal-receiving domain of MtrA exhibit growth defects in nutrient broth.", "pub_date": "2011 May", @@ -23740,8 +23338,7 @@ }, "11914371": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of Mycobacterium tuberculosis alkylhydroperoxidase AhpD, a potential target for antitubercular drug design.", "pub_date": "2002 May 31", @@ -23755,8 +23352,7 @@ }, "19374958": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystallographic and modelling studies on Mycobacterium tuberculosis RuvA Additional role of RuvB-binding domain and inter species variability.", "pub_date": "2009 Jul", @@ -23770,8 +23366,7 @@ }, "22825853": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical and structural study of the atypical acyltransferase domain from the mycobacterial polyketide synthase Pks13.", "pub_date": "2012 Sep 28", @@ -23785,8 +23380,7 @@ }, "32388919": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv3034c regulates mTORC1 and PPAR-\u03b3 dependant pexophagy mechanism to control redox levels in macrophages.", "pub_date": "2020 Sep", @@ -23814,8 +23408,7 @@ }, "26048136": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Cytosolic Sensor cGAS Detects Mycobacterium tuberculosis DNA to Induce Type I Interferons and Activate Autophagy.", "pub_date": "2015 Jun 10", @@ -23829,8 +23422,7 @@ }, "30315706": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The RES domain toxins of RES-Xre toxin-antitoxin modules induce cell stasis by degrading NAD+.", "pub_date": "2019 Jan", @@ -23844,8 +23436,7 @@ }, "17640840": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium species identification--a new approach via dnaJ gene sequencing.", "pub_date": "2007 Sep", @@ -23859,8 +23450,7 @@ }, "9887269": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the iron-dependent regulator (IdeR) from Mycobacterium tuberculosis shows both metal binding sites fully occupied.", "pub_date": "1999 Jan 22", @@ -23874,8 +23464,7 @@ }, "24352433": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Indoleamides are active against drug-resistant Mycobacterium tuberculosis.", "pub_date": "2013", @@ -23889,8 +23478,7 @@ }, "30560095": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv1288, a Two Domain, Cell Wall Anchored, Nutrient Stress Inducible Carboxyl-Esterase of Mycobacterium tuberculosis, Modulates Cell Wall Lipid.", "pub_date": "2018", @@ -23919,8 +23507,7 @@ }, "23345537": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Proteomic profiling of Mycobacterium tuberculosis identifies nutrient-starvation-responsive toxin-antitoxin systems.", "pub_date": "2013 May", @@ -23934,8 +23521,7 @@ }, "16963641": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure and function of Rv0130, a conserved hypothetical protein from Mycobacterium tuberculosis.", "pub_date": "2006 Oct", @@ -23949,8 +23535,7 @@ }, "19604480": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of Mycobacterium tuberculosis KasA show mode of action within cell wall biosynthesis and its inhibition by thiolactomycin.", "pub_date": "2009 Jul 15", @@ -23964,8 +23549,7 @@ }, "16085396": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Tyrosine phosphatase MptpA of Mycobacterium tuberculosis inhibits phagocytosis and increases actin polymerization in macrophages.", "pub_date": "2005 Dec", @@ -23979,8 +23563,7 @@ }, "26051906": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of EspB, a secreted substrate of the ESX-1 secretion system of Mycobacterium tuberculosis.", "pub_date": "2015 Aug", @@ -23994,8 +23577,7 @@ }, "16942606": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interference of Mycobacterium tuberculosis cell division by Rv2719c, a cell wall hydrolase.", "pub_date": "2006 Oct", @@ -24009,8 +23591,7 @@ }, "10840036": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification and substrate specificity of beta -ketoacyl (acyl carrier protein) synthase III (mtFabH) from Mycobacterium tuberculosis.", "pub_date": "2000 Sep 8", @@ -24024,8 +23605,7 @@ }, "21536032": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Blockage of the channel to heme by the E87 side chain in the GAF domain of Mycobacterium tuberculosis DosS confers the unique sensitivity of DosS to oxygen.", "pub_date": "2011 Jun 23", @@ -24039,8 +23619,7 @@ }, "12375100": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of the mycothiol synthase gene (mshD) encoding the acetyltransferase producing mycothiol in actinomycetes.", "pub_date": "2002 Nov", @@ -24054,8 +23633,7 @@ }, "19251699": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis protein kinase K modulates activation of transcription from the promoter of mycobacterial monooxygenase operon through phosphorylation of the transcriptional regulator VirS.", "pub_date": "2009 Apr 24", @@ -24069,8 +23647,7 @@ }, "17604718": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "M. tuberculosis and M. leprae translocate from the phagolysosome to the cytosol in myeloid cells.", "pub_date": "2007 Jun 29", @@ -24084,8 +23661,7 @@ }, "21352546": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical and physiological characterization of the GTP-binding protein Obg of Mycobacterium tuberculosis.", "pub_date": "2011 Feb 25", @@ -24099,8 +23675,7 @@ }, "18486437": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Differential fadE28 expression associated with phenotypic virulence of Mycobacterium tuberculosis.", "pub_date": "2008 Jul", @@ -24114,8 +23689,7 @@ }, "34003742": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Integrated sensing of host stresses by inhibition of a cytoplasmic two-component system controls M. tuberculosis acute lung infection.", "pub_date": "2021 May 18", @@ -24144,8 +23718,7 @@ }, "17213192": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure and function of the zinc uptake regulator FurB from Mycobacterium tuberculosis.", "pub_date": "2007 Mar 30", @@ -24159,8 +23732,7 @@ }, "29119630": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv3651 is a triple sensor-domain protein.", "pub_date": "2018 Feb", @@ -24174,8 +23746,7 @@ }, "22610443": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Septal localization of the Mycobacterium tuberculosis MtrB sensor kinase promotes MtrA regulon expression.", "pub_date": "2012 Jul 6", @@ -24189,8 +23760,7 @@ }, "19448618": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Bacterial ubiquitin-like modifier Pup is deamidated and conjugated to substrates by distinct but homologous enzymes.", "pub_date": "2009 Jun", @@ -24204,8 +23774,7 @@ }, "30930162": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Drugging the Folate Pathway in Mycobacterium tuberculosis: The Role of Multi-targeting Agents.", "pub_date": "2019 Jun 20", @@ -24219,8 +23788,7 @@ }, "15659170": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a Mycobacterium tuberculosis proteasomal ATPase homologue.", "pub_date": "2005 Jan", @@ -24234,8 +23802,7 @@ }, "25535696": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation control of protein tyrosine phosphatase A activity in Mycobacterium tuberculosis.", "pub_date": "2015 Jan 30", @@ -24249,8 +23816,7 @@ }, "20184895": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The molecular structure of ornithine acetyltransferase from Mycobacterium tuberculosis bound to ornithine, a competitive inhibitor.", "pub_date": "2010 Apr 9", @@ -24264,8 +23830,7 @@ }, "19944079": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning, expression and characterization of Mycobacterium tuberculosis lipoprotein LprF.", "pub_date": "2010 Jan 1", @@ -24279,8 +23844,7 @@ }, "24145139": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis possesses an unusual tmRNA rescue system.", "pub_date": "2014 Jan", @@ -24294,8 +23858,7 @@ }, "22740025": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional characterization delineates that a Mycobacterium tuberculosis specific protein kinase (Rv3080c) is responsible for the growth, phagocytosis and intracellular survival of avirulent mycobacteria.", "pub_date": "2012 Oct", @@ -24309,8 +23872,7 @@ }, "26861878": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Elongation of the Poly-\u03b3-glutamate Tail of F420 Requires Both Domains of the F420:\u03b3-Glutamyl Ligase (FbiB) of Mycobacterium tuberculosis.", "pub_date": "2016 Mar 25", @@ -24324,8 +23886,7 @@ }, "1910148": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis shikimate pathway genes: evolutionary relationship between biosynthetic and catabolic 3-dehydroquinases.", "pub_date": "1991 Sep", @@ -24339,8 +23900,7 @@ }, "17726022": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterial cells have dual nickel-cobalt sensors: sequence relationships and metal sites of metal-responsive repressors are not congruent.", "pub_date": "2007 Nov 2", @@ -24354,8 +23914,7 @@ }, "17640872": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Genetic basis for the biosynthesis of methylglucose lipopolysaccharides in Mycobacterium tuberculosis.", "pub_date": "2007 Sep 14", @@ -24369,8 +23928,7 @@ }, "30475855": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular modelling and simulation studies of the Mycobacterium tuberculosis multidrug efflux pump protein Rv1258c.", "pub_date": "2018", @@ -24384,8 +23942,7 @@ }, "20678187": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A new family of phosphoinositide phosphatases in microorganisms: identification and biochemical analysis.", "pub_date": "2010 Aug 2", @@ -24399,8 +23956,7 @@ }, "19596241": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "CarD is an essential regulator of rRNA transcription required for Mycobacterium tuberculosis persistence.", "pub_date": "2009 Jul 10", @@ -24414,8 +23970,7 @@ }, "22529992": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv3586 (DacA) is a diadenylate cyclase that converts ATP or ADP into c-di-AMP.", "pub_date": "2012", @@ -24429,8 +23984,7 @@ }, "25049233": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Substrate specificities and conformational flexibility of 3-ketosteroid 9\u03b1-hydroxylases.", "pub_date": "2014 Sep 12", @@ -24444,8 +23998,7 @@ }, "14672660": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of Mycobacterium tuberculosis MPT51 (FbpC1) defines a new family of non-catalytic alpha/beta hydrolases.", "pub_date": "2004 Jan 9", @@ -24459,8 +24012,7 @@ }, "22244759": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824.", "pub_date": "2012 Jan 11", @@ -24474,8 +24026,7 @@ }, "17685373": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of inhibitors for mycobacterial protein tyrosine phosphatase B (MptpB) by biology-oriented synthesis (BIOS).", "pub_date": "2007 Sep 3", @@ -24489,8 +24040,7 @@ }, "11747311": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Engineering of an intersubunit disulfide bridge in the iron-superoxide dismutase of Mycobacterium tuberculosis.", "pub_date": "2002 Jan 1", @@ -24504,8 +24054,7 @@ }, "33210347": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the large subunit of cobaltochelatase from Mycobacterium tuberculosis.", "pub_date": "2021 Apr", @@ -24519,8 +24068,7 @@ }, "25299337": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Anticytolytic screen identifies inhibitors of mycobacterial virulence protein secretion.", "pub_date": "2014 Oct 8", @@ -24534,8 +24082,7 @@ }, "30342240": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv3272 encodes a novel Family III CoA transferase that alters the cell wall lipid profile and protects mycobacteria from acidic and oxidative stress.", "pub_date": "2019 Mar", @@ -24549,8 +24096,7 @@ }, "12951098": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel inhibitors of an emerging target in Mycobacterium tuberculosis; substituted thiazolidinones as inhibitors of dTDP-rhamnose synthesis.", "pub_date": "2003 Oct 6", @@ -24564,8 +24110,7 @@ }, "23684389": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification and characterisation of small-molecule inhibitors of Rv3097c-encoded lipase (LipY) of Mycobacterium tuberculosis that selectively inhibit growth of bacilli in hypoxia.", "pub_date": "2013 Jul", @@ -24579,8 +24124,7 @@ }, "21109436": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Reverse type I inhibitor of Mycobacterium tuberculosis CYP125A1.", "pub_date": "2011 Jan 1", @@ -24594,8 +24138,7 @@ }, "15958258": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression, immunochemical characterization and localization of the Mycobacterium tuberculosis protein p27.", "pub_date": "2005 Jul", @@ -24609,8 +24152,7 @@ }, "26876563": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis ketol-acid reductoisomerase at 1.0 \u00c5 resolution - a potential target for anti-tuberculosis drug discovery.", "pub_date": "2016 Apr", @@ -24624,8 +24166,7 @@ }, "27666194": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural studies of Mycobacterium tuberculosis DprE1 interacting with its inhibitors.", "pub_date": "2017 Mar", @@ -24639,8 +24180,7 @@ }, "20027301": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Dissecting the role of critical residues and substrate preference of a Fatty Acyl-CoA Synthetase (FadD13) of Mycobacterium tuberculosis.", "pub_date": "2009 Dec 21", @@ -24654,8 +24194,7 @@ }, "38698289": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv2231c, a unique histidinol phosphate aminotransferase from Mycobacterium tuberculosis, supports virulence by inhibiting host-directed defense.", "pub_date": "2024 May 2", @@ -24669,8 +24208,7 @@ }, "15752203": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis iniA gene is essential for activity of an efflux pump that confers drug tolerance to both isoniazid and ethambutol.", "pub_date": "2005 Mar", @@ -24684,8 +24222,7 @@ }, "12219086": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A pantothenate auxotroph of Mycobacterium tuberculosis is highly attenuated and protects mice against tuberculosis.", "pub_date": "2002 Oct", @@ -24699,8 +24236,7 @@ }, "21819455": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis Ag85A is a novel diacylglycerol acyltransferase involved in lipid body formation.", "pub_date": "2011 Sep", @@ -24714,8 +24250,7 @@ }, "20421951": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The type I NADH dehydrogenase of Mycobacterium tuberculosis counters phagosomal NOX2 activity to inhibit TNF-alpha-mediated host cell apoptosis.", "pub_date": "2010 Apr 22", @@ -24729,8 +24264,7 @@ }, "19826007": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Forkhead-associated domain-containing protein Rv0019c and polyketide-associated protein PapA5, from substrates of serine/threonine protein kinase PknB to interacting proteins of Mycobacterium tuberculosis.", "pub_date": "2009 Dec 11", @@ -24744,8 +24278,7 @@ }, "27513637": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Metabolic Network for the Biosynthesis of Intra- and Extracellular \u03b1-Glucans Required for Virulence of Mycobacterium tuberculosis.", "pub_date": "2016 Aug", @@ -24759,8 +24292,7 @@ }, "10510241": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of microbial dimethylarginine dimethylaminohydrolase enzymes.", "pub_date": "1999 Sep", @@ -24774,8 +24306,7 @@ }, "16803893": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PimE is a polyprenol-phosphate-mannose-dependent mannosyltransferase that transfers the fifth mannose of phosphatidylinositol mannoside in mycobacteria.", "pub_date": "2006 Sep 1", @@ -24789,8 +24320,7 @@ }, "16135231": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A non-RD1 gene cluster is required for Snm secretion in Mycobacterium tuberculosis.", "pub_date": "2005 Sep", @@ -24804,8 +24334,7 @@ }, "17975835": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Analyzing the catalytic mechanism of MPtpA: a low molecular weight protein tyrosine phosphatase from Mycobacterium tuberculosis through site-directed mutagenesis.", "pub_date": "2008 May 1", @@ -24819,8 +24348,7 @@ }, "25544271": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis 38-kDa antigen induces endoplasmic reticulum stress-mediated apoptosis via toll-like receptor 2/4.", "pub_date": "2015 Mar", @@ -24834,8 +24362,7 @@ }, "28327423": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of an extracellular protein, Rv1076 from M. tuberculosis with a potential role in humoral response.", "pub_date": "2017 Aug", @@ -24849,8 +24376,7 @@ }, "30306715": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characteristics of the essential pathogenicity factor Rv1828, a MerR family transcription regulator from Mycobacterium\u00a0tuberculosis.", "pub_date": "2018 Dec", @@ -24864,8 +24390,7 @@ }, "25482540": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "FadA5 a thiolase from Mycobacterium tuberculosis: a steroid-binding pocket reveals the potential for drug development against tuberculosis.", "pub_date": "2015 Jan 6", @@ -24879,8 +24404,7 @@ }, "25232742": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "LprG-mediated surface expression of lipoarabinomannan is essential for virulence of Mycobacterium tuberculosis.", "pub_date": "2014 Sep", @@ -24894,8 +24418,7 @@ }, "21945589": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "pknE, a serine/threonine kinase of Mycobacterium tuberculosis modulates multiple apoptotic paradigms.", "pub_date": "2012 Jun", @@ -24909,8 +24432,7 @@ }, "18974870": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The co-operonic PE25/PPE41 protein complex of Mycobacterium tuberculosis elicits increased humoral and cell mediated immune response.", "pub_date": "2008", @@ -24924,8 +24446,7 @@ }, "29395080": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biophysical and biochemical characterization of Rv3405c, a tetracycline repressor protein from Mycobacterium tuberculosis.", "pub_date": "2018 Feb 12", @@ -24939,8 +24460,7 @@ }, "29360453": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The ABC transporter Rv1272c of Mycobacterium tuberculosis enhances the import of long-chain fatty acids in Escherichia coli.", "pub_date": "2018 Feb 5", @@ -24954,8 +24474,7 @@ }, "16573683": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis PhoPR two-component system regulates genes essential for virulence and complex lipid biosynthesis.", "pub_date": "2006 Apr", @@ -24969,8 +24488,7 @@ }, "20636328": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular analysis of the prokaryotic ubiquitin-like protein (Pup) conjugation pathway in Mycobacterium tuberculosis.", "pub_date": "2010 Sep", @@ -24984,8 +24502,7 @@ }, "37552364": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Correction to: An Immunoinformatics-Based Study of Mycobacterium tuberculosis Region of Difference-2 Uncharacterized Protein (Rv1987) as a Potential Subunit Vaccine Candidate for Preliminary Ex Vivo Analysis.", "pub_date": "2024 Apr", @@ -24999,8 +24516,7 @@ }, "21035536": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of Mycobacterium tuberculosis genes preferentially expressed during human infection.", "pub_date": "2011 Jan", @@ -25014,8 +24530,7 @@ }, "26476134": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Hypothetical protein Rv3423.1 of Mycobacterium tuberculosis is a histone acetyltransferase.", "pub_date": "2016 Jan", @@ -25029,8 +24544,7 @@ }, "28071726": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The PPE2 protein of Mycobacterium tuberculosis translocates to host nucleus and inhibits nitric oxide production.", "pub_date": "2017 Jan 10", @@ -25044,8 +24558,7 @@ }, "20805881": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into the quinolone resistance mechanism of Mycobacterium tuberculosis DNA gyrase.", "pub_date": "2010 Aug 18", @@ -25059,8 +24572,7 @@ }, "14575702": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphoprotein phosphatase of Mycobacterium tuberculosis dephosphorylates serine-threonine kinases PknA and PknB.", "pub_date": "2003 Nov 7", @@ -25074,8 +24586,7 @@ }, "17676952": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A mycobacterium ESX-1-secreted virulence factor with unique requirements for export.", "pub_date": "2007 Aug 3", @@ -25089,8 +24600,7 @@ }, "26397812": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "glpx Gene in Mycobacterium tuberculosis Is Required for In Vitro Gluconeogenic Growth and In Vivo Survival.", "pub_date": "2015", @@ -25104,8 +24614,7 @@ }, "20025669": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "RseA, the SigE specific anti-sigma factor of Mycobacterium tuberculosis, is inactivated by phosphorylation-dependent ClpC1P2 proteolysis.", "pub_date": "2010 Feb", @@ -25119,8 +24628,7 @@ }, "24970891": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The non-catalytic \"cap domain\" of a mycobacterial metallophosphoesterase regulates its expression and localization in the cell.", "pub_date": "2014 Aug 8", @@ -25134,8 +24642,7 @@ }, "22567094": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The secreted lipoprotein, MPT83, of Mycobacterium tuberculosis is recognized during human tuberculosis and stimulates protective immunity in mice.", "pub_date": "2012", @@ -25149,8 +24656,7 @@ }, "19936047": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An anaerobic-type alpha-ketoglutarate ferredoxin oxidoreductase completes the oxidative tricarboxylic acid cycle of Mycobacterium tuberculosis.", "pub_date": "2009 Nov", @@ -25164,8 +24670,7 @@ }, "25467293": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Enriching the annotation of Mycobacterium tuberculosis H37Rv proteome using remote homology detection approaches: insights into structure and function.", "pub_date": "2015 Jan", @@ -25179,8 +24684,7 @@ }, "18452585": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a novel alpha(1-->6) mannopyranosyltransferase MptB from Corynebacterium glutamicum by deletion of a conserved gene, NCgl1505, affords a lipomannan- and lipoarabinomannan-deficient mutant.", "pub_date": "2008 Jun", @@ -25194,8 +24698,7 @@ }, "12066895": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and localization of the Mycobacterium tuberculosis protein tyrosine phosphatase PtpA.", "pub_date": "2002 May", @@ -25209,8 +24712,7 @@ }, "27417938": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Redox chemistry of Mycobacterium tuberculosis alkylhydroperoxide reductase E (AhpE): Structural and mechanistic insight into a mycoredoxin-1 independent reductive pathway of AhpE via mycothiol.", "pub_date": "2016 Aug", @@ -25224,8 +24726,7 @@ }, "17145760": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and biophysical studies on two promoter recognition domains of the extra-cytoplasmic function sigma factor sigma(C) from Mycobacterium tuberculosis.", "pub_date": "2007 Feb 16", @@ -25239,8 +24740,7 @@ }, "18974091": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of Rv3868, an essential hypothetical protein of the ESX-1 secretion system in Mycobacterium tuberculosis.", "pub_date": "2008 Dec 26", @@ -25254,8 +24754,7 @@ }, "23448669": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PPE2 protein of Mycobacterium tuberculosis may inhibit nitric oxide in activated macrophages.", "pub_date": "2013 Apr", @@ -25269,8 +24768,7 @@ }, "15749014": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Dissecting the mechanism and assembly of a complex virulence mycobacterial lipid.", "pub_date": "2005 Mar 4", @@ -25284,8 +24782,7 @@ }, "23146019": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "FadD3 is an acyl-CoA synthetase that initiates catabolism of cholesterol rings C and D in actinobacteria.", "pub_date": "2013 Jan", @@ -25299,8 +24796,7 @@ }, "11254389": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An interfacial mechanism and a class of inhibitors inferred from two crystal structures of the Mycobacterium tuberculosis 30 kDa major secretory protein (Antigen 85B), a mycolyl transferase.", "pub_date": "2001 Mar 23", @@ -25314,8 +24810,7 @@ }, "15207486": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Global expression profiling of strains harbouring null mutations reveals that the five rpf-like genes of Mycobacterium tuberculosis show functional redundancy.", "pub_date": "2004", @@ -25329,8 +24824,7 @@ }, "15778718": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mechanism of nonhomologous end-joining in mycobacteria: a low-fidelity repair system driven by Ku, ligase D and ligase C.", "pub_date": "2005 Apr", @@ -25344,8 +24838,7 @@ }, "19068228": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression of Mycobacterium tuberculosis pe_pgrs33 is repressed during stationary phase and stress conditions, and its transcription is mediated by sigma factor A.", "pub_date": "2009 Mar", @@ -25359,8 +24852,7 @@ }, "26364913": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis PPE protein Rv1168c induces stronger B cell response than Rv0256c in active TB patients.", "pub_date": "2016 Jun", @@ -25374,8 +24866,7 @@ }, "20085764": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Stoichiometric protein complex formation and over-expression using the prokaryotic native operon structure.", "pub_date": "2010 Feb 19", @@ -25389,8 +24880,7 @@ }, "32382148": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a toxin-antitoxin system in Mycobacterium tuberculosis suggests neutralization by phosphorylation as the antitoxicity mechanism.", "pub_date": "2020 May 7", @@ -25404,8 +24894,7 @@ }, "30118676": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Bacterial Protein Reshapes Host Defense toward Antiviral Responses.", "pub_date": "2018 Aug 16", @@ -25419,8 +24908,7 @@ }, "17449476": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Eis (enhanced intracellular survival) protein of Mycobacterium tuberculosis disturbs the cross regulation of T-cells.", "pub_date": "2007 Jun 29", @@ -25434,8 +24922,7 @@ }, "8633206": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular characterization of MPT83: a seroreactive antigen of Mycobacterium tuberculosis with homology to MPT70.", "pub_date": "1996 May", @@ -25449,8 +24936,7 @@ }, "33469941": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv1987 protein induces M2 polarization of macrophages through activating the PI3K/Akt1/mTOR signaling pathway.", "pub_date": "2021 Jul", @@ -25465,7 +24951,6 @@ "15809303": { "groups": [ "mtuberculosis", - "escherichia_coli", "hsp_70" ], "title": "Mycobacterium tuberculosis heat shock proteins use diverse Toll-like receptor pathways to activate pro-inflammatory signals.", @@ -25480,8 +24965,7 @@ }, "7871388": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning and sequencing of a unique antigen MPT70 from Mycobacterium tuberculosis H37Rv and expression in BCG using E. coli-mycobacteria shuttle vector.", "pub_date": "1995 Mar", @@ -25495,8 +24979,7 @@ }, "15878857": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification and active expression of the Mycobacterium tuberculosis gene encoding 5-phospho-{alpha}-d-ribose-1-diphosphate: decaprenyl-phosphate 5-phosphoribosyltransferase, the first enzyme committed to decaprenylphosphoryl-d-arabinose synthesis.", "pub_date": "2005 Jul 1", @@ -25510,8 +24993,7 @@ }, "34751132": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A nanocompartment system contributes to defense against oxidative stress in Mycobacterium tuberculosis.", "pub_date": "2021 Nov 9", @@ -25525,8 +25007,7 @@ }, "25665034": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Evidence that phosphorylation of threonine in the GT motif triggers activation of PknA, a eukaryotic-type serine/threonine kinase from Mycobacterium\u00a0tuberculosis.", "pub_date": "2015 Apr", @@ -25540,8 +25021,7 @@ }, "26751071": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterial Metabolic Syndrome: LprG and Rv1410 Regulate Triacylglyceride Levels, Growth Rate and Virulence in Mycobacterium tuberculosis.", "pub_date": "2016 Jan", @@ -25555,8 +25035,7 @@ }, "20826344": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure and functional regulation of RipA, a mycobacterial enzyme essential for daughter cell separation.", "pub_date": "2010 Sep 8", @@ -25570,8 +25049,7 @@ }, "15663922": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The high-resolution Structure of LeuB (Rv2995c) from Mycobacterium tuberculosis.", "pub_date": "2005 Feb 11", @@ -25585,8 +25063,7 @@ }, "11929527": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling.", "pub_date": "2002 Feb", @@ -25600,8 +25077,7 @@ }, "35715720": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Investigating a putative transcriptional regulatory protein encoded by Rv1719 gene of Mycobacterium tuberculosis.", "pub_date": "2022 Jun", @@ -25615,8 +25091,7 @@ }, "22834700": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The unusual mycobacterial chaperonins: evidence for in vivo oligomerization and specialization of function.", "pub_date": "2012 Sep", @@ -25630,8 +25105,7 @@ }, "12950916": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PknB kinase activity is regulated by phosphorylation in two Thr residues and dephosphorylation by PstP, the cognate phospho-Ser/Thr phosphatase, in Mycobacterium tuberculosis.", "pub_date": "2003 Sep", @@ -25645,8 +25119,7 @@ }, "15680239": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a novel peptidoglycan hydrolase CwlM in Mycobacterium tuberculosis.", "pub_date": "2005 Feb 14", @@ -25660,8 +25133,7 @@ }, "23300718": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Role of PPE18 protein in intracellular survival and pathogenicity of Mycobacterium tuberculosis in mice.", "pub_date": "2012", @@ -25675,8 +25147,7 @@ }, "33609202": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Iron uptake and transport by the carboxymycobactin-mycobactin siderophore machinery of Mycobacterium tuberculosis is dependent on the iron-regulated protein HupB.", "pub_date": "2021 Jun", @@ -25690,8 +25161,7 @@ }, "26348876": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Design and Development of Mycobacterium tuberculosis Lysine \u025b-Aminotransferase Inhibitors for Latent Tuberculosis Infection.", "pub_date": "2016 Feb", @@ -25705,8 +25175,7 @@ }, "23721164": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Transcriptional regulation of fatty acid biosynthesis in mycobacteria.", "pub_date": "2013 Jul", @@ -25720,8 +25189,7 @@ }, "32774813": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A new DNA vaccine expressing HspX-PPE44-EsxV fusion antigens of Mycobacterium tuberculosis induced strong immune responses.", "pub_date": "2020 Jul", @@ -25735,8 +25203,7 @@ }, "16483748": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Profiling of Mycobacterium tuberculosis gene expression during human macrophage infection: upregulation of the alternative sigma factor G, a group of transcriptional regulators, and proteins with unknown function.", "pub_date": "2006 Jun", @@ -25750,8 +25217,7 @@ }, "17411339": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "M. tuberculosis Ser/Thr protein kinase D phosphorylates an anti-anti-sigma factor homolog.", "pub_date": "2007 Apr", @@ -25765,8 +25231,7 @@ }, "18367444": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "X-ray structure of 4,4'-dihydroxybenzophenone mimicking sterol substrate in the active site of sterol 14alpha-demethylase (CYP51).", "pub_date": "2008 May 30", @@ -25780,8 +25245,7 @@ }, "22888002": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The apo-structure of the low molecular weight protein-tyrosine phosphatase A (MptpA) from Mycobacterium tuberculosis allows for better target-specific drug development.", "pub_date": "2012 Oct 5", @@ -25795,8 +25259,7 @@ }, "24733389": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Atypical OmpR/PhoB subfamily response regulator GlnR of actinomycetes functions as a homodimer, stabilized by the unphosphorylated conserved Asp-focused charge interactions.", "pub_date": "2014 May 30", @@ -25810,8 +25273,7 @@ }, "19430487": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cyclodipeptide synthases are a family of tRNA-dependent peptide bond-forming enzymes.", "pub_date": "2009 Jun", @@ -25826,7 +25288,6 @@ "22578863": { "groups": [ "mtuberculosis", - "escherichia_coli", "sgtpb" ], "title": "Cloning and characterization of GTP-binding proteins of Mycobacterium tuberculosis H(37)Rv.", @@ -25841,8 +25302,7 @@ }, "30118682": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An Mtb-Human Protein-Protein Interaction Map Identifies a Switch between Host Antiviral and Antibacterial Responses.", "pub_date": "2018 Aug 16", @@ -25856,8 +25316,7 @@ }, "25642820": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis suppresses innate immunity by coopting the host ubiquitin system.", "pub_date": "2015 Mar", @@ -25871,8 +25330,7 @@ }, "19019160": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Regulation of glutamate metabolism by protein kinases in mycobacteria.", "pub_date": "2008 Dec", @@ -25886,8 +25344,7 @@ }, "26984196": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The M. tuberculosis HAD phosphatase (Rv3042c) interacts with host proteins and is inhibited by Clofazimine.", "pub_date": "2016 Sep", @@ -25901,8 +25358,7 @@ }, "20543190": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Discovery and Characterization of HemQ: an essential heme biosynthetic pathway component.", "pub_date": "2010 Aug 20", @@ -25916,8 +25372,7 @@ }, "25321481": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis ESAT-6 is a leukocidin causing Ca2+ influx, necrosis and neutrophil extracellular trap formation.", "pub_date": "2014 Oct 16", @@ -25931,8 +25386,7 @@ }, "25210044": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cholesterol ester oxidation by mycobacterial cytochrome P450.", "pub_date": "2014 Oct 31", @@ -25946,8 +25400,7 @@ }, "16769720": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Broad substrate stereospecificity of the Mycobacterium tuberculosis 7-keto-8-aminopelargonic acid synthase: Spectroscopic and kinetic studies.", "pub_date": "2006 Sep 1", @@ -25961,8 +25414,7 @@ }, "16739134": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of the phosphorylation sites of Mycobacterium tuberculosis serine/threonine protein kinases, PknA, PknD, PknE, and PknH by mass spectrometry.", "pub_date": "2006 Jul", @@ -25976,8 +25428,7 @@ }, "25899163": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Psp system of Mycobacterium tuberculosis integrates envelope stress-sensing and envelope-preserving functions.", "pub_date": "2015 Aug", @@ -25991,8 +25442,7 @@ }, "25010492": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Acquired resistance of Mycobacterium tuberculosis to bedaquiline.", "pub_date": "2014", @@ -26006,8 +25456,7 @@ }, "20980199": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "TubercuList--10 years after.", "pub_date": "2011 Jan", @@ -26021,8 +25470,7 @@ }, "20808924": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An oligopeptide transporter of Mycobacterium tuberculosis regulates cytokine release and apoptosis of infected macrophages.", "pub_date": "2010 Aug 17", @@ -26036,8 +25484,7 @@ }, "22110736": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional dissection of the PE domain responsible for translocation of PE_PGRS33 across the mycobacterial cell wall.", "pub_date": "2011", @@ -26051,8 +25498,7 @@ }, "26212120": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of LipN (Rv2970c) of Mycobacterium Tuberculosis H37Rv and its Probable Role in Xenobiotic Degradation.", "pub_date": "2016 Feb", @@ -26066,8 +25512,7 @@ }, "25359607": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PstS-1, the 38-kDa Mycobacterium tuberculosis glycoprotein, is an adhesin, which binds the macrophage mannose receptor and promotes phagocytosis.", "pub_date": "2015 Jan", @@ -26081,8 +25526,7 @@ }, "21620858": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and thermodynamic signatures of DNA recognition by Mycobacterium tuberculosis DnaA.", "pub_date": "2011 Jul 15", @@ -26096,8 +25540,7 @@ }, "37833269": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis for triacylglyceride extraction from mycobacterial inner membrane by MFS transporter Rv1410.", "pub_date": "2023 Oct 13", @@ -26111,8 +25554,7 @@ }, "15294902": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inactivation of the mycobacterial rhamnosyltransferase, which is needed for the formation of the arabinogalactan-peptidoglycan linker, leads to irreversible loss of viability.", "pub_date": "2004 Oct 15", @@ -26126,8 +25568,7 @@ }, "23711725": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A continuous spectrophotometric assay for adenosine 5'-phosphosulfate reductase activity with sulfite-selective probes.", "pub_date": "2013 Sep 1", @@ -26141,8 +25582,7 @@ }, "18851927": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Azole resistance in Mycobacterium tuberculosis is mediated by the MmpS5-MmpL5 efflux system.", "pub_date": "2009 Jan", @@ -26156,8 +25596,7 @@ }, "35287590": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv3737 is required for Mycobacterium tuberculosis growth in vitro and in vivo and correlates with bacterial load and disease severity in human tuberculosis.", "pub_date": "2022 Mar 14", @@ -26171,8 +25610,7 @@ }, "22615856": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Enzymatic activities and DNA substrate specificity of Mycobacterium tuberculosis DNA helicase XPB.", "pub_date": "2012", @@ -26186,8 +25624,7 @@ }, "19695264": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis for the inhibition of Mycobacterium tuberculosis glutamine synthetase by novel ATP-competitive inhibitors.", "pub_date": "2009 Oct 23", @@ -26201,8 +25638,7 @@ }, "22534010": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of Ffh of Mycobacterium tuberculosis and its interaction with 4.5S RNA.", "pub_date": "2012 Oct 12", @@ -26216,8 +25652,7 @@ }, "26158909": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Lansoprazole is an antituberculous prodrug targeting cytochrome bc1.", "pub_date": "2015 Jul 9", @@ -26231,8 +25666,7 @@ }, "16321983": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural mechanics of the pH-dependent activity of beta-carbonic anhydrase from Mycobacterium tuberculosis.", "pub_date": "2006 Feb 24", @@ -26246,8 +25680,7 @@ }, "16472764": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "rmlB and rmlC genes are essential for growth of mycobacteria.", "pub_date": "2006 Mar 31", @@ -26261,8 +25694,7 @@ }, "19605350": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction of Mycobacterium tuberculosis CYP130 with heterocyclic arylamines.", "pub_date": "2009 Sep 11", @@ -26276,8 +25708,7 @@ }, "27468924": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Revisiting sulfur H-bonds in proteins: The example of peroxiredoxin AhpE.", "pub_date": "2016 Jul 29", @@ -26291,8 +25722,7 @@ }, "28651002": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The N-terminal domain of Mycobacterium tuberculosis PPE17 (Rv1168c) protein plays a dominant role in inducing antibody responses in active TB patients.", "pub_date": "2017", @@ -26306,8 +25736,7 @@ }, "21761124": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Chemical shift assignments for Rv0577, a putative glyoxylase associated with virulence from Mycobacterium tuberculosis.", "pub_date": "2012 Apr", @@ -26321,8 +25750,7 @@ }, "10573420": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Complex lipid determines tissue-specific replication of Mycobacterium tuberculosis in mice.", "pub_date": "1999 Nov 4", @@ -26336,8 +25764,7 @@ }, "18952600": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure and proposed activity of a member of the VapBC family of toxin-antitoxin systems. VapBC-5 from Mycobacterium tuberculosis.", "pub_date": "2009 Jan 2", @@ -26351,8 +25778,7 @@ }, "31534126": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Heme and hemoglobin utilization by Mycobacterium tuberculosis.", "pub_date": "2019 Sep 18", @@ -26366,8 +25792,7 @@ }, "10360352": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The two types of 3-dehydroquinase have distinct structures but catalyze the same overall reaction.", "pub_date": "1999 Jun", @@ -26381,8 +25806,7 @@ }, "9692181": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biosynthetic origin of mycobacterial cell wall galactofuranosyl residues.", "pub_date": "1997", @@ -26396,8 +25820,7 @@ }, "9535763": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning and expression of an acyl-CoA dehydrogenase from Mycobacterium tuberculosis.", "pub_date": "1998 Mar 27", @@ -26411,8 +25834,7 @@ }, "12842039": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of the first enzyme in the pantothenate biosynthetic pathway, ketopantoate hydroxymethyltransferase, from M tuberculosis.", "pub_date": "2003 Jul", @@ -26426,8 +25848,7 @@ }, "25136958": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a cross-reactive, immunodominant and HLA-promiscuous epitope of Mycobacterium tuberculosis-specific major antigenic protein PPE68.", "pub_date": "2014", @@ -26441,8 +25862,7 @@ }, "20028978": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis cAMP receptor protein (Rv3676) differs from the Escherichia coli paradigm in its cAMP binding and DNA binding properties and transcription activation properties.", "pub_date": "2010 Mar 5", @@ -26456,8 +25876,7 @@ }, "10089160": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "In vitro evidence of two-component system phosphorylation between the Mycobacterium tuberculosis TrcR/TrcS proteins.", "pub_date": "1999 Apr", @@ -26471,8 +25890,7 @@ }, "19193643": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Profound asymmetry in the structure of the cAMP-free cAMP Receptor Protein (CRP) from Mycobacterium tuberculosis.", "pub_date": "2009 Mar 27", @@ -26486,8 +25904,7 @@ }, "17486091": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Direct extracellular interaction between the early secreted antigen ESAT-6 of Mycobacterium tuberculosis and TLR2 inhibits TLR signaling in macrophages.", "pub_date": "2007 Jun", @@ -26501,8 +25918,7 @@ }, "16233726": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystallographic studies of Mycobacterium tuberculosis polyphosphate/ATP-NAD kinase complexed with NAD.", "pub_date": "2004", @@ -26516,8 +25932,7 @@ }, "20036253": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of ArgP from Mycobacterium tuberculosis confirms two distinct conformations of full-length LysR transcriptional regulators and reveals its function in DNA binding and transcriptional regulation.", "pub_date": "2010 Mar 5", @@ -26531,8 +25946,7 @@ }, "20462494": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of PknB extracellular PASTA domain from mycobacterium tuberculosis suggests a ligand-dependent kinase activation.", "pub_date": "2010 May 12", @@ -26546,8 +25960,7 @@ }, "21166899": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel copper-responsive regulon in Mycobacterium tuberculosis.", "pub_date": "2011 Jan", @@ -26561,8 +25974,7 @@ }, "26347855": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterial tlyA gene product is localized to the cell-wall without signal sequence.", "pub_date": "2015", @@ -26576,8 +25988,7 @@ }, "15178486": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Intermolecular interactions in the AhpC/AhpD antioxidant defense system of Mycobacterium tuberculosis.", "pub_date": "2004 Jul 1", @@ -26591,8 +26002,7 @@ }, "25608501": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "MazF ribonucleases promote Mycobacterium tuberculosis drug tolerance and virulence in guinea pigs.", "pub_date": "2015 Jan 22", @@ -26606,8 +26016,7 @@ }, "27634911": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PPE32 promotes cytokines production and host cell apoptosis through caspase cascade accompanying with enhanced ER stress response.", "pub_date": "2016 Oct 11", @@ -26621,8 +26030,7 @@ }, "19394346": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The three-dimensional Structure of a mycobacterial DapD provides insights into DapD diversity and reveals unexpected particulars about the enzymatic mechanism.", "pub_date": "2009 Jun 26", @@ -26636,8 +26044,7 @@ }, "21586573": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis early secreted antigenic target of 6 kDa inhibits T cell interferon-\u03b3 production through the p38 mitogen-activated protein kinase pathway.", "pub_date": "2011 Jul 8", @@ -26651,8 +26058,7 @@ }, "15028724": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the apo forms of psi 55 tRNA pseudouridine synthase from Mycobacterium tuberculosis: a hinge at the base of the catalytic cleft.", "pub_date": "2004 Jun 4", @@ -26666,8 +26072,7 @@ }, "26299907": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Discovery of novel lysine \u025b-aminotransferase inhibitors: An intriguing potential target for latent tuberculosis.", "pub_date": "2015 Dec", @@ -26681,8 +26086,7 @@ }, "26510127": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis for phosphatidylinositol-phosphate biosynthesis.", "pub_date": "2015 Oct 16", @@ -26696,8 +26100,7 @@ }, "20629176": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of the Mycobacterium tuberculosis Rv3019c-Rv3020c ESX complex reveals a domain-swapped heterotetramer.", "pub_date": "2010 Sep", @@ -26711,8 +26114,7 @@ }, "16949369": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacteriophage exploit NHEJ to facilitate genome circularization.", "pub_date": "2006 Sep 1", @@ -26726,8 +26128,7 @@ }, "37521869": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Erratum to \"Identification of anti-Mycobacterium tuberculosis agents targeting the interaction of bacterial division proteins FtsZ and SepFe\" [Acta Pharmaceutica Sinica B 13 (2023) 2056-2070].", "pub_date": "2023 Jul", @@ -26741,8 +26142,7 @@ }, "17387176": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a novel arabinofuranosyltransferase AftB involved in a terminal step of cell wall arabinan biosynthesis in Corynebacterianeae, such as Corynebacterium glutamicum and Mycobacterium tuberculosis.", "pub_date": "2007 May 18", @@ -26756,8 +26156,7 @@ }, "21802426": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The dimeric structure of the Cpn60.2 chaperonin of Mycobacterium tuberculosis at 2.8 \u00c5 reveals possible modes of function.", "pub_date": "2011 Sep 16", @@ -26771,8 +26170,7 @@ }, "25807229": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel pathway producing dimethylsulphide in bacteria is widespread in soil environments.", "pub_date": "2015 Mar 25", @@ -26786,8 +26184,7 @@ }, "20628579": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional genetic diversity among Mycobacterium tuberculosis complex clinical isolates: delineation of conserved core and lineage-specific transcriptomes during intracellular survival.", "pub_date": "2010 Jul 8", @@ -26801,8 +26198,7 @@ }, "12464486": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The role of KasA and KasB in the biosynthesis of meromycolic acids and isoniazid resistance in Mycobacterium tuberculosis.", "pub_date": "2002", @@ -26816,8 +26212,7 @@ }, "24467650": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An immunomodulatory role for the Mycobacterium tuberculosis region of difference 1 locus proteins PE35 (Rv3872) and PPE68 (Rv3873).", "pub_date": "2014 Mar", @@ -26831,8 +26226,7 @@ }, "31388991": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Methyl arachidonyl fluorophosphonate inhibits Mycobacterium\u00a0tuberculosis thioesterase TesA and globally affects vancomycin susceptibility.", "pub_date": "2020 Jan", @@ -26846,8 +26240,7 @@ }, "10932251": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of isocitrate lyase, a persistence factor of Mycobacterium tuberculosis.", "pub_date": "2000 Aug", @@ -26861,8 +26254,7 @@ }, "11304545": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Galactan biosynthesis in Mycobacterium tuberculosis. Identification of a bifunctional UDP-galactofuranosyltransferase.", "pub_date": "2001 Jul 13", @@ -26876,8 +26268,7 @@ }, "9159528": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Aminoglycoside 2'-N-acetyltransferase genes are universally present in mycobacteria: characterization of the aac(2')-Ic gene from Mycobacterium tuberculosis and the aac(2')-Id gene from Mycobacterium smegmatis.", "pub_date": "1997 Apr", @@ -26891,8 +26282,7 @@ }, "19015727": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis glucosyl-3-phosphoglycerate synthase: structure of a key enzyme in methylglucose lipopolysaccharide biosynthesis.", "pub_date": "2008", @@ -26921,8 +26311,7 @@ }, "22745722": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Wild-type phosphoribosylpyrophosphate synthase (PRS) from Mycobacterium tuberculosis: a bacterial class II PRS?", "pub_date": "2012", @@ -26936,8 +26325,7 @@ }, "10542234": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Decreased capacity of recombinant 45/47-kDa molecules (Apa) of Mycobacterium tuberculosis to stimulate T lymphocyte responses related to changes in their mannosylation pattern.", "pub_date": "1999 Nov 5", @@ -26951,8 +26339,7 @@ }, "12010501": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Evidence for a partial redundancy of the fibronectin-binding proteins for the transfer of mycoloyl residues onto the cell wall arabinogalactan termini of Mycobacterium tuberculosis.", "pub_date": "2002 May", @@ -26966,8 +26353,7 @@ }, "34978741": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Protein O-mannosyltransferase Rv1002c contributes to low cell permeability, biofilm formation in\u2009vitro, and mycobacterial survival in mice.", "pub_date": "2022 Mar", @@ -26981,8 +26367,7 @@ }, "23064392": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "ChoD and HsdD can be dispensable for cholesterol degradation in mycobacteria.", "pub_date": "2013 Mar", @@ -26996,8 +26381,7 @@ }, "20167072": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inositol monophosphate phosphatase genes of Mycobacterium tuberculosis.", "pub_date": "2010 Feb 18", @@ -27011,8 +26395,7 @@ }, "37167974": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into DarT toxin neutralization by cognate DarG antitoxin: ssDNA mimicry by DarG C-terminal domain keeps the DarT toxin inhibited.", "pub_date": "2023 Jul 6", @@ -27026,8 +26409,7 @@ }, "21840262": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Isolation of conditional expression mutants in Mycobacterium tuberculosis by transposon mutagenesis.", "pub_date": "2011 Nov", @@ -27041,8 +26423,7 @@ }, "19428471": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular characterization of Mycobacterium tuberculosis cystathionine gamma synthase--apo- and holoforms.", "pub_date": "2009 Jun 1", @@ -27056,8 +26437,7 @@ }, "22206986": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular structure and peptidoglycan recognition of Mycobacterium tuberculosis ArfA (Rv0899).", "pub_date": "2012 Feb 17", @@ -27071,8 +26451,7 @@ }, "33412199": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Essential biochemical, biophysical and computational inputs on efficient functioning of Mycobacterium tuberculosis H(37)Rv FtsY.", "pub_date": "2021 Feb 28", @@ -27086,8 +26465,7 @@ }, "22115998": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The sensor region of the ubiquitous cytosolic sensor kinase, PdtaS, contains PAS and GAF domain sensing modules.", "pub_date": "2012 Feb", @@ -27101,8 +26479,7 @@ }, "23770708": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Antituberculosis thiophenes define a requirement for Pks13 in mycolic acid biosynthesis.", "pub_date": "2013 Aug", @@ -27116,8 +26493,7 @@ }, "26396239": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Core component EccB1 of the Mycobacterium tuberculosis type VII secretion system is a periplasmic ATPase.", "pub_date": "2015 Dec", @@ -27131,8 +26507,7 @@ }, "10970728": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning of a gene from Mycobacterium tuberculosis coding for a hypothetical 27 kDa protein and its use for the specific PCR identification of these mycobacteria.", "pub_date": "2000 Aug", @@ -27146,8 +26521,7 @@ }, "25711532": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "HemQ: An iron-coproporphyrin oxidative decarboxylase for protoheme synthesis in Firmicutes and Actinobacteria.", "pub_date": "2015 May 15", @@ -27161,8 +26535,7 @@ }, "16298337": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "RshA mimetic peptides inhibiting the transcription driven by a Mycobacterium tuberculosis sigma factor SigH.", "pub_date": "2006 Jan 6", @@ -27176,8 +26549,7 @@ }, "16499927": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "1.6 A crystal structure of the secreted chorismate mutase from Mycobacterium tuberculosis: novel fold topology revealed.", "pub_date": "2006 Apr 14", @@ -27191,8 +26563,7 @@ }, "15033981": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Two sensor kinases contribute to the hypoxic response of Mycobacterium tuberculosis.", "pub_date": "2004 May 28", @@ -27206,8 +26577,7 @@ }, "9862811": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of quinolinic acid phosphoribosyltransferase from Mmycobacterium tuberculosis: a potential TB drug target.", "pub_date": "1998 Dec 15", @@ -27221,8 +26591,7 @@ }, "16354661": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel lipase belonging to the hormone-sensitive lipase family induced under starvation to utilize stored triacylglycerol in Mycobacterium tuberculosis.", "pub_date": "2006 Feb 17", @@ -27236,8 +26605,7 @@ }, "17097323": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv3303c of Mycobacterium tuberculosis protects tubercle bacilli against oxidative stress in vivo and contributes to virulence in mice.", "pub_date": "2006 Nov-Dec", @@ -27251,8 +26619,7 @@ }, "27573104": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Network analysis identifies Rv0324 and Rv0880 as regulators of bedaquiline tolerance in Mycobacterium tuberculosis.", "pub_date": "2016 Jun 6", @@ -27266,8 +26633,7 @@ }, "23760277": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis secreted protein Rv0203 transfers heme to membrane proteins MmpL3 and MmpL11.", "pub_date": "2013 Jul 26", @@ -27295,8 +26661,7 @@ }, "24737322": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the transcriptional regulator Rv0678 of Mycobacterium tuberculosis.", "pub_date": "2014 Jun 6", @@ -27310,8 +26675,7 @@ }, "18822333": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Immunogenicity and protective efficacy of tuberculosis subunit vaccines expressing PPE44 (Rv2770c).", "pub_date": "2008 Nov 11", @@ -27325,8 +26689,7 @@ }, "24019530": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and biochemical analyses of Mycobacterium tuberculosis N-acetylmuramyl-L-alanine amidase Rv3717 point to a role in peptidoglycan fragment recycling.", "pub_date": "2013 Nov 1", @@ -27340,8 +26703,7 @@ }, "8617763": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning, expression, and characterization of polyphosphate glucokinase from Mycobacterium tuberculosis.", "pub_date": "1996 Mar 1", @@ -27355,8 +26717,7 @@ }, "15136047": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Sensor domain of the Mycobacterium tuberculosis receptor Ser/Thr protein kinase, PknD, forms a highly symmetric beta propeller.", "pub_date": "2004 May 28", @@ -27370,8 +26731,7 @@ }, "15701515": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal Structure of AhpE from Mycobacterium tuberculosis, a 1-Cys peroxiredoxin.", "pub_date": "2005 Mar 4", @@ -27385,8 +26745,7 @@ }, "28237036": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv1474c is a TetR-like transcriptional repressor that regulates aconitase, an essential enzyme and RNA-binding protein, in an iron-responsive manner.", "pub_date": "2017 Mar", @@ -27400,8 +26759,7 @@ }, "16857584": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2'-O-methylations in 16S and 23S rRNAs.", "pub_date": "2006 Jul 21", @@ -27415,8 +26773,7 @@ }, "30952857": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A revised biosynthetic pathway for the cofactor F(420) in prokaryotes.", "pub_date": "2019 Apr 5", @@ -27430,8 +26787,7 @@ }, "19778616": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Purification and molecular characterization of a novel diadenosine 5',5'''-P(1),P(4)-tetraphosphate phosphorylase from Mycobacterium tuberculosis H37Rv.", "pub_date": "2010 Jan", @@ -27445,8 +26801,7 @@ }, "22937074": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction of Mycobacterium tuberculosis RshA and SigH is mediated by salt bridges.", "pub_date": "2012", @@ -27460,8 +26815,7 @@ }, "19876390": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Systematic genetic nomenclature for type VII secretion systems.", "pub_date": "2009 Oct", @@ -27475,8 +26829,7 @@ }, "21787411": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a human immunodominant T-cell epitope of mycobacterium tuberculosis antigen PPE44.", "pub_date": "2011 Jul 25", @@ -27490,8 +26843,7 @@ }, "19016841": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Loss of kinase activity in Mycobacterium tuberculosis multidomain protein Rv1364c.", "pub_date": "2008 Dec", @@ -27505,8 +26857,7 @@ }, "38755122": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterial biotin synthases require an auxiliary protein to convert dethiobiotin into biotin.", "pub_date": "2024 May 16", @@ -27520,8 +26871,7 @@ }, "9514635": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of iron-regulated proteins of Mycobacterium tuberculosis and cloning of tandem genes encoding a low iron-induced protein and a metal transporting ATPase with similarities to two-component metal transport systems.", "pub_date": "1998 Mar", @@ -27535,8 +26885,7 @@ }, "24894561": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Synthesis of new verapamil analogues and their evaluation in combination with rifampicin against Mycobacterium tuberculosis and molecular docking studies in the binding site of efflux protein Rv1258c.", "pub_date": "2014 Jul 15", @@ -27550,8 +26899,7 @@ }, "21605934": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Stability, denaturation and refolding of Mycobacterium tuberculosis MfpA, a DNA mimicking protein that confers antibiotic resistance.", "pub_date": "2011 Nov", @@ -27565,8 +26913,7 @@ }, "31958639": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Global discovery the PstP interactions using Mtb proteome microarray and revealing novel connections with EthR.", "pub_date": "2020 Mar 20", @@ -27580,8 +26927,7 @@ }, "26299947": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of Ribosomal Silencing Factor Bound to Mycobacterium tuberculosis Ribosome.", "pub_date": "2015 Oct 6", @@ -27595,8 +26941,7 @@ }, "12913008": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Unusual structural, functional, and stability properties of serine hydroxymethyltransferase from Mycobacterium tuberculosis.", "pub_date": "2003 Oct 17", @@ -27610,8 +26955,7 @@ }, "7489918": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Genomic organization of the mycobacterial sigma gene cluster.", "pub_date": "1995 Nov 7", @@ -27625,8 +26969,7 @@ }, "25586004": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of the catalytic domain of the ser/thr kinase PknA from M. tuberculosis shows an Src-like autoinhibited conformation.", "pub_date": "2015 May", @@ -27640,8 +26983,7 @@ }, "16210318": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "p-Hydroxybenzoic acid synthesis in Mycobacterium tuberculosis.", "pub_date": "2005 Dec 9", @@ -27655,8 +26997,7 @@ }, "12123450": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Role of the extracytoplasmic-function sigma factor sigma(H) in Mycobacterium tuberculosis global gene expression.", "pub_date": "2002 Jul", @@ -27670,8 +27011,7 @@ }, "12207710": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Disruption of msl3 abolishes the synthesis of mycolipanoic and mycolipenic acids required for polyacyltrehalose synthesis in Mycobacterium tuberculosis H37Rv and causes cell aggregation.", "pub_date": "2002 Sep", @@ -27685,8 +27025,7 @@ }, "26309039": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "LytB1 and LytB2 of Mycobacterium tuberculosis Are Not Genetically Redundant.", "pub_date": "2015", @@ -27700,8 +27039,7 @@ }, "34408320": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular basis for DarT ADP-ribosylation of a DNA base.", "pub_date": "2021 Aug", @@ -27715,8 +27053,7 @@ }, "21264299": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of critical residues of the mycobacterial dephosphocoenzyme a kinase by site-directed mutagenesis.", "pub_date": "2011 Jan 11", @@ -27730,8 +27067,7 @@ }, "12548283": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of Mycobacterium tuberculosis PknB supports a universal activation mechanism for Ser/Thr protein kinases.", "pub_date": "2003 Mar", @@ -27745,8 +27081,7 @@ }, "25659431": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis response regulators, DevR and NarL, interact in vivo and co-regulate gene expression during aerobic nitrate metabolism.", "pub_date": "2015 Mar 27", @@ -27760,8 +27095,7 @@ }, "20975714": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A chemical genetic screen in Mycobacterium tuberculosis identifies carbon-source-dependent growth inhibitors devoid of in vivo efficacy.", "pub_date": "2010 Aug 24", @@ -27775,8 +27109,7 @@ }, "30742339": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Increased drug permeability of a stiffened mycobacterial outer membrane in cells lacking MFS transporter Rv1410 and lipoprotein LprG.", "pub_date": "2019 May", @@ -27790,8 +27123,7 @@ }, "17619020": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural plasticity and enzyme action: crystal structures of mycobacterium tuberculosis peptidyl-tRNA hydrolase.", "pub_date": "2007 Sep 7", @@ -27805,8 +27137,7 @@ }, "15342249": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of Mycobacterium tuberculosis FtsZ reveals unexpected, G protein-like conformational switches.", "pub_date": "2004 Sep 17", @@ -27820,8 +27151,7 @@ }, "21731728": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Insights into the regulatory characteristics of the mycobacterial dephosphocoenzyme A kinase: implications for the universal CoA biosynthesis pathway.", "pub_date": "2011", @@ -27835,8 +27165,7 @@ }, "25521849": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of M. tuberculosis SerB2, an essential HAD-family phosphatase, reveals novel properties.", "pub_date": "2014", @@ -27850,8 +27179,7 @@ }, "27562263": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Suppression of autophagy and antigen presentation by Mycobacterium tuberculosis PE_PGRS47.", "pub_date": "2016 Aug 15", @@ -27865,8 +27193,7 @@ }, "1423588": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Protein splicing in the maturation of M. tuberculosis recA protein: a mechanism for tolerating a novel class of intervening sequence.", "pub_date": "1992 Oct 16", @@ -27880,8 +27207,7 @@ }, "24033595": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and characterization of Rv0447c product, potentially the methyltransferase involved in tuberculostearic acid biosynthesis in Mycobacterium tuberculosis.", "pub_date": "2013 Jul-Aug", @@ -27895,8 +27221,7 @@ }, "18485066": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The mRNA interferases, MazF-mt3 and MazF-mt7 from Mycobacterium tuberculosis target unique pentad sequences in single-stranded RNA.", "pub_date": "2008 Aug", @@ -27910,8 +27235,7 @@ }, "27154903": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis rv1400c encodes functional lipase/esterase.", "pub_date": "2017 Jan", @@ -27925,8 +27249,7 @@ }, "22206988": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular basis of the functional divergence of fatty acyl-AMP ligase biosynthetic enzymes of Mycobacterium tuberculosis.", "pub_date": "2012 Feb 17", @@ -27940,8 +27263,7 @@ }, "20103719": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Two cutinase-like proteins secreted by Mycobacterium tuberculosis show very different lipolytic activities reflecting their physiological function.", "pub_date": "2010 Jun", @@ -27955,8 +27277,7 @@ }, "16051262": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of an atypical epoxide hydrolase from Mycobacterium tuberculosis gives insights into its function.", "pub_date": "2005 Sep 2", @@ -27970,8 +27291,7 @@ }, "10816587": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a short (C15) chain Z-isoprenyl diphosphate synthase and a homologous long (C50) chain isoprenyl diphosphate synthase in Mycobacterium tuberculosis.", "pub_date": "2000 Jul 28", @@ -27985,8 +27305,7 @@ }, "16762364": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A conserved dimer and global conformational changes in the structure of apo-PknE Ser/Thr protein kinase from Mycobacterium tuberculosis.", "pub_date": "2006 Jul 7", @@ -28000,8 +27319,7 @@ }, "11050656": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Evidence for the expression of native Mycobacterium tuberculosis phospholipase C: recognition by immune sera and detection of promoter activity.", "pub_date": "2000 Nov", @@ -28015,8 +27333,7 @@ }, "38417748": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and biophysical characterization of PadR family protein Rv1176c of Mycobacterium tuberculosis H37Rv.", "pub_date": "2024 Apr", @@ -28030,8 +27347,7 @@ }, "18304349": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Study of the role of Mce3R on the transcription of mce genes of Mycobacterium tuberculosis.", "pub_date": "2008 Feb 27", @@ -28045,8 +27361,7 @@ }, "29247008": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis for lipid binding and mechanism of the Mycobacterium tuberculosis Rv3802 phospholipase.", "pub_date": "2018 Jan 26", @@ -28060,8 +27375,7 @@ }, "26774486": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Ergothioneine Maintains Redox and Bioenergetic Homeostasis Essential for Drug Susceptibility and Virulence of Mycobacterium tuberculosis.", "pub_date": "2016 Jan 26", @@ -28075,8 +27389,7 @@ }, "29049397": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The transcriptional regulator LysG (Rv1985c) of Mycobacterium tuberculosis activates lysE (Rv1986) in a lysine-dependent manner.", "pub_date": "2017", @@ -28090,8 +27403,7 @@ }, "37565603": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE_PGRS45 (Rv2615c) protein of Mycobacterium tuberculosis perturbs mitochondria of macrophages.", "pub_date": "2023 Aug 11", @@ -28105,8 +27417,7 @@ }, "19607839": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Prokaryotic ubiquitin-like protein pup is intrinsically disordered.", "pub_date": "2009 Sep 11", @@ -28120,8 +27431,7 @@ }, "21730061": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Solution structure of the Mycobacterium tuberculosis EsxG\u00b7EsxH complex: functional implications and comparisons with other M. tuberculosis Esx family complexes.", "pub_date": "2011 Aug 26", @@ -28135,8 +27445,7 @@ }, "15737998": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Purified recombinant hypothetical protein coded by open reading frame Rv1885c of Mycobacterium tuberculosis exhibits a monofunctional AroQ class of periplasmic chorismate mutase activity.", "pub_date": "2005 May 20", @@ -28150,8 +27459,7 @@ }, "22110704": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv2607 from Mycobacterium tuberculosis is a pyridoxine 5'-phosphate oxidase with unusual substrate specificity.", "pub_date": "2011", @@ -28165,8 +27473,7 @@ }, "11469859": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "X-ray structure of TMP kinase from Mycobacterium tuberculosis complexed with TMP at 1.95 A resolution.", "pub_date": "2001 Aug 3", @@ -28180,8 +27487,7 @@ }, "23560081": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis ClpP proteases are co-transcribed but exhibit different substrate specificities.", "pub_date": "2013", @@ -28195,8 +27501,7 @@ }, "26589796": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Lipoprotein LprI of Mycobacterium tuberculosis Acts as a Lysozyme Inhibitor.", "pub_date": "2016 Feb 5", @@ -28210,8 +27515,7 @@ }, "23425360": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The role of 3-ketosteroid 1(2)-dehydrogenase in the pathogenicity of Mycobacterium tuberculosis.", "pub_date": "2013 Feb 20", @@ -28225,8 +27529,7 @@ }, "16468985": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis prcBA genes encode a gated proteasome with broad oligopeptide specificity.", "pub_date": "2006 Mar", @@ -28240,8 +27543,7 @@ }, "22355692": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv2419c, the missing glucosyl-3-phosphoglycerate phosphatase for the second step in methylglucose lipopolysaccharide biosynthesis.", "pub_date": "2011", @@ -28255,8 +27557,7 @@ }, "36402348": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis protease Rv3090 is associated with late cell apoptosis and participates in organ injuries and mycobacterial dissemination in mice.", "pub_date": "2022 Dec", @@ -28270,8 +27571,7 @@ }, "7968530": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The rpsL gene and streptomycin resistance in single and multiple drug-resistant strains of Mycobacterium tuberculosis.", "pub_date": "1993 Nov", @@ -28285,8 +27585,7 @@ }, "12906832": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure and mechanism of MT-ADPRase, a nudix hydrolase from Mycobacterium tuberculosis.", "pub_date": "2003 Aug", @@ -28300,8 +27599,7 @@ }, "16194279": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Comparison of Mycobacterium tuberculosis isocitrate dehydrogenases (ICD-1 and ICD-2) reveals differences in coenzyme affinity, oligomeric state, pH tolerance and phylogenetic affiliation.", "pub_date": "2005 Sep 29", @@ -28315,8 +27613,7 @@ }, "29174965": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "IL-6 release of Rv0183 antigen-stimulated whole blood is a potential biomarker for active tuberculosis patients.", "pub_date": "2018 Apr", @@ -28330,8 +27627,7 @@ }, "24028583": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Multiple deletions in the polyketide synthase gene repertoire of Mycobacterium tuberculosis reveal functional overlap of cell envelope lipids in host-pathogen interactions.", "pub_date": "2014 Feb", @@ -28345,8 +27641,7 @@ }, "22275911": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inhibition of the Plasma-Membrane-Associated Serine Protease Cathepsin G by Mycobacterium tuberculosis Rv3364c Suppresses Caspase-1 and Pyroptosis in Macrophages.", "pub_date": "2011", @@ -28360,8 +27655,7 @@ }, "23084287": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis-secreted phosphatases: from pathogenesis to targets for TB drug development.", "pub_date": "2013 Feb", @@ -28375,8 +27669,7 @@ }, "18535356": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional characterization of the phospholipase C activity of Rv3487c and its localization on the cell wall of Mycobacterium tuberculosis.", "pub_date": "2008 Jun", @@ -28390,8 +27683,7 @@ }, "24409094": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Ser/Thr protein kinase B mediates an oxygen-dependent replication switch.", "pub_date": "2014 Jan", @@ -28405,8 +27697,7 @@ }, "21987574": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Activity of 3-ketosteroid 9\u03b1-hydroxylase (KshAB) indicates cholesterol side chain and ring degradation occur simultaneously in Mycobacterium tuberculosis.", "pub_date": "2011 Nov 25", @@ -28420,8 +27711,7 @@ }, "21283666": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the pyrazinamidase of Mycobacterium tuberculosis: insights into natural and acquired resistance to pyrazinamide.", "pub_date": "2011 Jan 24", @@ -28435,8 +27725,7 @@ }, "12410821": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A family of autocrine growth factors in Mycobacterium tuberculosis.", "pub_date": "2002 Nov", @@ -28450,8 +27739,7 @@ }, "28942842": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A green fluorescent protein-based assay for high-throughput ligand-binding studies of a mycobacterial biotin protein ligase.", "pub_date": "2017 Dec", @@ -28465,8 +27753,7 @@ }, "12144918": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Sulfotransferases and sulfatases in mycobacteria.", "pub_date": "2002 Jul", @@ -28480,8 +27767,7 @@ }, "33166528": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Determination of in vitro and in vivo immune response to recombinant cholesterol oxidase from Mycobacterium tuberculosis.", "pub_date": "2020 Dec", @@ -28495,8 +27781,7 @@ }, "22023140": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Substrate specificity of the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis responsible for the bioreductive activation of bicyclic nitroimidazoles.", "pub_date": "2012 Jan", @@ -28510,8 +27795,7 @@ }, "17223373": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Apoptosis triggered by Rv1818c, a PE family gene from Mycobacterium tuberculosis is regulated by mitochondrial intermediates in T cells.", "pub_date": "2007 Mar", @@ -28525,8 +27809,7 @@ }, "15060088": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a novel class of omega,E,E-farnesyl diphosphate synthase from Mycobacterium tuberculosis.", "pub_date": "2004 Jun", @@ -28540,8 +27823,7 @@ }, "25728768": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Proteasomal control of cytokinin synthesis protects Mycobacterium tuberculosis against nitric oxide.", "pub_date": "2015 Mar 19", @@ -28555,8 +27837,7 @@ }, "19962420": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction analysis of TcrX/Y two component system from Mycobacterium tuberculosis.", "pub_date": "2010 Mar", @@ -28570,8 +27851,7 @@ }, "23719937": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PstS1 amplifies IFN-\u03b3 and induces IL-17/IL-22 responses by unrelated memory CD4+ T cells via dendritic cell activation.", "pub_date": "2013 Sep", @@ -28585,8 +27865,7 @@ }, "21085589": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis phosphoribosylpyrophosphate synthetase: biochemical features of a crucial enzyme for mycobacterial cell wall biosynthesis.", "pub_date": "2010 Nov 15", @@ -28600,8 +27879,7 @@ }, "15016811": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Heme-ligand tunneling in group I truncated hemoglobins.", "pub_date": "2004 May 14", @@ -28615,8 +27893,7 @@ }, "27097115": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv3628 drives Th1-type T cell immunity via TLR2-mediated activation of dendritic cells and displays vaccine potential against the hyper-virulent Beijing K strain.", "pub_date": "2016 May 3", @@ -28644,8 +27921,7 @@ }, "18461140": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mechanistic insights into a novel exporter-importer system of Mycobacterium tuberculosis unravel its role in trafficking of iron.", "pub_date": "2008 May 7", @@ -28659,8 +27935,7 @@ }, "23000993": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rapid point-of-care detection of the tuberculosis pathogen using a BlaC-specific fluorogenic probe.", "pub_date": "2012 Oct", @@ -28689,8 +27964,7 @@ }, "11431477": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Eukaryotic-like adenylyl cyclases in Mycobacterium tuberculosis H37Rv: cloning and characterization.", "pub_date": "2001 Sep 14", @@ -28704,8 +27978,7 @@ }, "8921893": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning, expression, purification and characterization of DNA topoisomerase I of Mycobacterium tuberculosis.", "pub_date": "1996 Oct 31", @@ -28719,8 +27992,7 @@ }, "17020768": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mechanism of phosphoryl transfer catalyzed by shikimate kinase from Mycobacterium tuberculosis.", "pub_date": "2006 Dec 1", @@ -28734,8 +28006,7 @@ }, "30837962": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mutations in Efflux Pump Rv1258c (Tap) Cause Resistance to Pyrazinamide, Isoniazid, and Streptomycin in M. tuberculosis.", "pub_date": "2019", @@ -28749,8 +28020,7 @@ }, "27079268": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis of DNA sequence recognition by the response regulator PhoP in Mycobacterium tuberculosis.", "pub_date": "2016 Apr 15", @@ -28764,8 +28034,7 @@ }, "26209027": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Solution structure of the PhoP DNA-binding domain from Mycobacterium tuberculosis.", "pub_date": "2015 Sep", @@ -28779,8 +28048,7 @@ }, "10974545": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The mycosins of Mycobacterium tuberculosis H37Rv: a family of subtilisin-like serine proteases.", "pub_date": "2000 Aug 22", @@ -28794,8 +28062,7 @@ }, "15840564": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Met-Tyr-Trp cross-link in Mycobacterium tuberculosis catalase-peroxidase (KatG): autocatalytic formation and effect on enzyme catalysis and spectroscopic properties.", "pub_date": "2005 Jun 17", @@ -28809,8 +28076,7 @@ }, "16407990": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Small-molecule inhibition of siderophore biosynthesis in Mycobacterium tuberculosis and Yersinia pestis.", "pub_date": "2005 Jun", @@ -28824,8 +28090,7 @@ }, "16730023": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "NADP+ expels both the co-factor and a substrate analog from the Mycobacterium tuberculosis ThyX active site: opportunities for anti-bacterial drug design.", "pub_date": "2006 Jun 30", @@ -28839,8 +28104,7 @@ }, "18434314": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv1698 of Mycobacterium tuberculosis represents a new class of channel-forming outer membrane proteins.", "pub_date": "2008 Jun 27", @@ -28854,8 +28118,7 @@ }, "14597624": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Gram-positive DsbE proteins function differently from Gram-negative DsbE homologs. A structure to function analysis of DsbE from Mycobacterium tuberculosis.", "pub_date": "2004 Jan 30", @@ -28869,8 +28132,7 @@ }, "16356931": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Further insight into S-adenosylmethionine-dependent methyltransferases: structural characterization of Hma, an enzyme essential for the biosynthesis of oxygenated mycolic acids in Mycobacterium tuberculosis.", "pub_date": "2006 Feb 17", @@ -28884,8 +28146,7 @@ }, "20800577": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Non-acylated Mycobacterium bovis glycoprotein MPB83 binds to TLR1/2 and stimulates production of matrix metalloproteinase 9.", "pub_date": "2010 Sep 24", @@ -28899,8 +28160,7 @@ }, "12941968": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A new family of type III polyketide synthases in Mycobacterium tuberculosis.", "pub_date": "2003 Nov 7", @@ -28914,8 +28174,7 @@ }, "20545868": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Insights into the function of the WhiB-like protein of mycobacteriophage TM4--a transcriptional inhibitor of WhiB2.", "pub_date": "2010 Aug", @@ -28929,8 +28188,7 @@ }, "33420031": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inhibiting Mycobacterium tuberculosis CoaBC by targeting an allosteric site.", "pub_date": "2021 Jan 8", @@ -28944,8 +28202,7 @@ }, "33064871": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Modification of the Pseudomonas\u00a0aeruginosa toxin 2-heptyl-1-hydroxyquinolin-4(1H)-one and other secondary metabolites by methyltransferases from mycobacteria.", "pub_date": "2021 Apr", @@ -28959,8 +28216,7 @@ }, "36258102": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Role of C-terminal domain of Mycobacterium tuberculosis PE6 (Rv0335c) protein in host mitochondrial stress and macrophage apoptosis.", "pub_date": "2023 Feb", @@ -28974,8 +28230,7 @@ }, "16288916": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis reveals a common catalytic scaffold and ancestry for type I and type II enzymes.", "pub_date": "2005 Dec 9", @@ -28989,8 +28244,7 @@ }, "20188740": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure and comparative functional analyses of a Mycobacterium aldo-keto reductase.", "pub_date": "2010 Apr 23", @@ -29004,8 +28258,7 @@ }, "22890978": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Application of fragment screening and merging to the discovery of inhibitors of the Mycobacterium tuberculosis cytochrome P450 CYP121.", "pub_date": "2012 Sep 10", @@ -29019,8 +28272,7 @@ }, "18457574": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel DNA glycosylases from Mycobacterium tuberculosis.", "pub_date": "2008 Apr", @@ -29034,8 +28286,7 @@ }, "27235395": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Distal Hydrogen-bonding Interactions in Ligand Sensing and Signaling by Mycobacterium tuberculosis DosS.", "pub_date": "2016 Jul 29", @@ -29049,8 +28300,7 @@ }, "35521527": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "RNase E and HupB dynamics foster mycobacterial cell homeostasis and fitness.", "pub_date": "2022 May 20", @@ -29064,8 +28314,7 @@ }, "28082125": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Oligomeric state of hypoxanthine-guanine phosphoribosyltransferase from Mycobacterium tuberculosis.", "pub_date": "2017 Apr", @@ -29079,8 +28328,7 @@ }, "26368558": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Is a Natural Ornithine Aminotransferase (rocD) Mutant and Depends on Rv2323c for Growth on Arginine.", "pub_date": "2015", @@ -29094,8 +28342,7 @@ }, "27325376": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The perilipin-like PPE15 protein in Mycobacterium tuberculosis is required for triacylglycerol accumulation under dormancy-inducing conditions.", "pub_date": "2016 Sep", @@ -29109,8 +28356,7 @@ }, "28222482": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional reconstitution of the Mycobacterium tuberculosis long-chain acyl-CoA carboxylase from multiple acyl-CoA subunits.", "pub_date": "2017 Apr", @@ -29124,8 +28370,7 @@ }, "11339880": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Analysis of stress- and host cell-induced expression of the Mycobacterium tuberculosis inorganic pyrophosphatase.", "pub_date": "2001", @@ -29139,8 +28384,7 @@ }, "16931093": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Human T-cell responses to 25 novel antigens encoded by genes of the dormancy regulon of Mycobacterium tuberculosis.", "pub_date": "2006 Jul", @@ -29154,8 +28398,7 @@ }, "16873379": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The condensing activities of the Mycobacterium tuberculosis type II fatty acid synthase are differentially regulated by phosphorylation.", "pub_date": "2006 Oct 6", @@ -29169,8 +28412,7 @@ }, "33914998": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Transition metal cation inhibition of Mycobacterium tuberculosis esterase RV0045C.", "pub_date": "2021 Aug", @@ -29184,8 +28426,7 @@ }, "17046787": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "RmlC, a C3' and C5' carbohydrate epimerase, appears to operate via an intermediate with an unusual twist boat conformation.", "pub_date": "2007 Jan 5", @@ -29199,8 +28440,7 @@ }, "15668773": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction studies on proteins encoded by the phthiocerol dimycocerosate locus of Mycobacterium tuberculosis.", "pub_date": "2004 Dec", @@ -29214,8 +28454,7 @@ }, "15341725": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal and solution structure of a putative transcriptional antiterminator from Mycobacterium tuberculosis.", "pub_date": "2004 Sep", @@ -29229,8 +28468,7 @@ }, "23431276": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Discovery of a siderophore export system essential for virulence of Mycobacterium tuberculosis.", "pub_date": "2013 Jan", @@ -29244,8 +28482,7 @@ }, "26237511": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The tuberculosis necrotizing toxin kills macrophages by hydrolyzing NAD.", "pub_date": "2015 Sep", @@ -29259,8 +28496,7 @@ }, "22094151": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "ChiZ levels modulate cell division process in mycobacteria.", "pub_date": "2011 Dec", @@ -29274,8 +28510,7 @@ }, "32808291": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel function of Mycobacterium\u00a0tuberculosis chaperonin paralog GroEL1 in copper homeostasis.", "pub_date": "2020 Oct", @@ -29289,8 +28524,7 @@ }, "25224505": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation regulates mycobacterial proteasome.", "pub_date": "2014 Sep", @@ -29304,8 +28538,7 @@ }, "21237161": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv0989c encodes a novel (E)-geranyl diphosphate synthase facilitating decaprenyl diphosphate biosynthesis in Mycobacterium tuberculosis.", "pub_date": "2011 Feb 4", @@ -29319,8 +28552,7 @@ }, "20011113": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Comprehensive functional analysis of Mycobacterium tuberculosis toxin-antitoxin systems: implications for pathogenesis, stress responses, and evolution.", "pub_date": "2009 Dec", @@ -29334,8 +28566,7 @@ }, "31054279": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv0191 is an efflux pump of major facilitator superfamily transporter regulated by Rv1353c.", "pub_date": "2019 May 30", @@ -29349,8 +28580,7 @@ }, "29076563": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of glucose-1-phosphate thymidylyltransferase from Mycobacterium tuberculosis reveals the location of an essential magnesium ion in the RmlA-type enzymes.", "pub_date": "2018 Feb", @@ -29364,8 +28594,7 @@ }, "11483005": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning and overexpression in soluble form of functional shikimate kinase and 5-enolpyruvylshikimate 3-phosphate synthase enzymes from Mycobacterium tuberculosis.", "pub_date": "2001 Aug", @@ -29379,8 +28608,7 @@ }, "12958317": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of 1-D-myo-inosityl 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase (MshB) from Mycobacterium tuberculosis reveals a zinc hydrolase with a lactate dehydrogenase fold.", "pub_date": "2003 Nov 21", @@ -29394,8 +28622,7 @@ }, "15978616": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Proteomic identification of M. tuberculosis protein kinase substrates: PknB recruits GarA, a FHA domain-containing protein, through activation loop-mediated interactions.", "pub_date": "2005 Jul 29", @@ -29409,8 +28636,7 @@ }, "11940590": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Conclusive evidence that the major T-cell antigens of the Mycobacterium tuberculosis complex ESAT-6 and CFP-10 form a tight, 1:1 complex and characterization of the structural properties of ESAT-6, CFP-10, and the ESAT-6*CFP-10 complex. Implications for pathogenesis and virulence.", "pub_date": "2002 Jun 14", @@ -29424,8 +28650,7 @@ }, "15101979": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv1818c-encoded PE_PGRS protein of Mycobacterium tuberculosis is surface exposed and influences bacterial cell structure.", "pub_date": "2004 May", @@ -29439,8 +28664,7 @@ }, "37747938": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Differentiating the roles of Mycobacterium tuberculosis substrate binding proteins, FecB and FecB2, in iron uptake.", "pub_date": "2023 Sep", @@ -29454,8 +28678,7 @@ }, "26296329": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and computational dissection of the catalytic mechanism of the inorganic pyrophosphatase from Mycobacterium tuberculosis.", "pub_date": "2015 Oct", @@ -29469,8 +28692,7 @@ }, "18640126": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure and unusual protein chemistry of hypoxic response protein 1, a latency antigen and highly expressed member of the DosR regulon in Mycobacterium tuberculosis.", "pub_date": "2008 Nov 21", @@ -29484,8 +28706,7 @@ }, "29895832": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of monoacylglycerol lipase from M. tuberculosis reveals the basis for specific inhibition.", "pub_date": "2018 Jun 12", @@ -29499,8 +28720,7 @@ }, "15632186": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Alpha-methylacyl-CoA racemase from Mycobacterium tuberculosis. Mutational and structural characterization of the active site and the fold.", "pub_date": "2005 Apr 1", @@ -29514,8 +28734,7 @@ }, "36584479": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PE_PGRS1 promotes mycobacteria intracellular survival via reducing the concentration of intracellular free Ca(2+) and suppressing endoplasmic reticulum stress.", "pub_date": "2023 Feb", @@ -29543,8 +28762,7 @@ }, "18505459": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Trehalose synthase converts glycogen to trehalose.", "pub_date": "2008 Jul", @@ -29558,8 +28776,7 @@ }, "17433643": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A protein linkage map of the ESAT-6 secretion system 1 (ESX-1) of Mycobacterium tuberculosis.", "pub_date": "2009", @@ -29573,8 +28790,7 @@ }, "18275086": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis isocitrate lyase (MtbIcl): role of divalent cations in modulation of functional and structural properties.", "pub_date": "2008 Aug 15", @@ -29588,8 +28804,7 @@ }, "29730293": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of manganese-dependent transcriptional repressor MntR (Rv2788) from Mycobacterium tuberculosis in apo and manganese bound forms.", "pub_date": "2018 Jun 22", @@ -29603,8 +28818,7 @@ }, "22965870": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of NirD, the small subunit of the nitrite reductase NirbD from Mycobacterium tuberculosis at 2.0 \u00c5 resolution.", "pub_date": "2012 Dec", @@ -29618,8 +28832,7 @@ }, "26786654": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis EsxO (Rv2346c) promotes bacillary survival by inducing oxidative stress mediated genomic instability in macrophages.", "pub_date": "2016 Jan", @@ -29633,8 +28846,7 @@ }, "22906310": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Meropenem inhibits D,D-carboxypeptidase activity in Mycobacterium tuberculosis.", "pub_date": "2012 Oct", @@ -29648,8 +28860,7 @@ }, "1501713": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The catalase-peroxidase gene and isoniazid resistance of Mycobacterium tuberculosis.", "pub_date": "1992 Aug 13", @@ -29663,8 +28874,7 @@ }, "21905120": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis Rv3168: a putative aminoglycoside antibiotics resistance enzyme.", "pub_date": "2011 Oct", @@ -29678,8 +28888,7 @@ }, "19477414": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycolic acid cyclopropanation is essential for viability, drug resistance, and cell wall integrity of Mycobacterium tuberculosis.", "pub_date": "2009 May 29", @@ -29693,8 +28902,7 @@ }, "26662456": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Ca(II) Binding Regulates and Dominates the Reactivity of a Transition-Metal-Ion-Dependent Diesterase from Mycobacterium tuberculosis.", "pub_date": "2016 Jan 18", @@ -29708,8 +28916,7 @@ }, "17437721": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis for selective inhibition of Mycobacterium tuberculosis protein tyrosine phosphatase PtpB.", "pub_date": "2007 Apr", @@ -29723,8 +28930,7 @@ }, "20066037": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel role of phosphorylation-dependent interaction between FtsZ and FipA in mycobacterial cell division.", "pub_date": "2010 Jan 6", @@ -29738,8 +28944,7 @@ }, "18400743": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Heme oxygenase-1-derived carbon monoxide induces the Mycobacterium tuberculosis dormancy regulon.", "pub_date": "2008 Jun 27", @@ -29768,8 +28973,7 @@ }, "7592990": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The biosynthesis of cyclopropanated mycolic acids in Mycobacterium tuberculosis. Identification and functional analysis of CMAS-2.", "pub_date": "1995 Nov 10", @@ -29783,8 +28987,7 @@ }, "23927792": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Induced ectopic expression of HigB toxin in Mycobacterium tuberculosis results in growth inhibition, reduced abundance of a subset of mRNAs and cleavage of tmRNA.", "pub_date": "2013 Oct", @@ -29798,8 +29001,7 @@ }, "1502498": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A family of cross-reacting proteins secreted by Mycobacterium tuberculosis.", "pub_date": "1992 Aug", @@ -29813,8 +29015,7 @@ }, "15042094": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Enzymic activation and transfer of fatty acids as acyl-adenylates in mycobacteria.", "pub_date": "2004 Mar 25", @@ -29828,8 +29029,7 @@ }, "17242402": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Allosteric activation by dimerization of the PknD receptor Ser/Thr protein kinase from Mycobacterium tuberculosis.", "pub_date": "2007 Apr 13", @@ -29843,8 +29043,7 @@ }, "24831705": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expanding the chemical diversity of natural esters by engineering a polyketide-derived pathway into Escherichia coli.", "pub_date": "2014 Jul", @@ -29858,8 +29057,7 @@ }, "17427288": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction between FtsW and penicillin-binding protein 3 (PBP3) directs PBP3 to mid-cell, controls cell septation and mediates the formation of a trimeric complex involving FtsZ, FtsW and PBP3 in mycobacteria.", "pub_date": "2006 Dec", @@ -29873,8 +29071,7 @@ }, "17725819": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Dimerization of inositol monophosphatase Mycobacterium tuberculosis SuhB is not constitutive, but induced by binding of the activator Mg2+.", "pub_date": "2007 Aug 28", @@ -29888,8 +29085,7 @@ }, "21190553": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Regulation of polar peptidoglycan biosynthesis by Wag31 phosphorylation in mycobacteria.", "pub_date": "2010 Dec 29", @@ -29903,8 +29099,7 @@ }, "38211498": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv0495c regulates redox homeostasis in Mycobacterium tuberculosis.", "pub_date": "2024 Mar", @@ -29918,8 +29113,7 @@ }, "27006398": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal Structure of Mycobacterium tuberculosis H37Rv AldR (Rv2779c), a Regulator of the ald Gene: DNA BINDING AND IDENTIFICATION OF SMALL MOLECULE INHIBITORS.", "pub_date": "2016 Jun 3", @@ -29933,8 +29127,7 @@ }, "10963599": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Persistence of Mycobacterium tuberculosis in macrophages and mice requires the glyoxylate shunt enzyme isocitrate lyase.", "pub_date": "2000 Aug 17", @@ -29948,8 +29141,7 @@ }, "39706268": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Menaquinone-specific turnover by Mycobacterium tuberculosis cytochrome bd is redox regulated by the Q-loop disulfide bond.", "pub_date": "2025 Feb", @@ -29963,8 +29155,7 @@ }, "15231843": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis catalase-peroxidase.", "pub_date": "2004 Sep 10", @@ -29978,8 +29169,7 @@ }, "23167250": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of the Mycobacterium tuberculosis protein PE-PGRS62 as a novel effector that functions to block phagosome maturation and inhibit iNOS expression.", "pub_date": "2013 May", @@ -29993,8 +29183,7 @@ }, "18597781": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structural basis of chain length control in Rv1086.", "pub_date": "2008 Aug 1", @@ -30008,8 +29197,7 @@ }, "12888346": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of Mycobacterium tuberculosis single-stranded DNA-binding protein. Variability in quaternary structure and its implications.", "pub_date": "2003 Aug 8", @@ -30023,8 +29211,7 @@ }, "12163508": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A nickel-cobalt-sensing ArsR-SmtB family repressor. Contributions of cytosol and effector binding sites to metal selectivity.", "pub_date": "2002 Oct 11", @@ -30038,8 +29225,7 @@ }, "22916289": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel role of the PrpR as a transcription factor involved in the regulation of methylcitrate pathway in Mycobacterium tuberculosis.", "pub_date": "2012", @@ -30053,8 +29239,7 @@ }, "18248822": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression, purification and characterisation of soluble GlfT and the identification of a novel galactofuranosyltransferase Rv3782 involved in priming GlfT-mediated galactan polymerisation in Mycobacterium tuberculosis.", "pub_date": "2008 Apr", @@ -30068,8 +29253,7 @@ }, "18094751": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Thiacetazone, an antitubercular drug that inhibits cyclopropanation of cell wall mycolic acids in mycobacteria.", "pub_date": "2007 Dec 19", @@ -30083,8 +29267,7 @@ }, "26048137": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cyclic GMP-AMP Synthase Is an Innate Immune DNA Sensor for Mycobacterium tuberculosis.", "pub_date": "2015 Jun 10", @@ -30098,8 +29281,7 @@ }, "28412202": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The immunosuppressive effects of a novel recombinant LipQ (Rv2485c) protein of Mycobacterium tuberculosis on human macrophage cell lines.", "pub_date": "2017 Jun", @@ -30113,8 +29295,7 @@ }, "27147522": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PE13 (Rv1195) manipulates the host cell fate via p38-ERK-NF-\u03baB axis and apoptosis.", "pub_date": "2016 Jul", @@ -30128,8 +29309,7 @@ }, "24239356": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular basis for DNA double-strand break annealing and primer extension by an NHEJ DNA polymerase.", "pub_date": "2013 Nov 27", @@ -30143,8 +29323,7 @@ }, "19846551": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterial cytochrome p450 125 (cyp125) catalyzes the terminal hydroxylation of c27 steroids.", "pub_date": "2009 Dec 18", @@ -30158,8 +29337,7 @@ }, "20662102": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Proteomic analysis identifies highly antigenic proteins in exosomes from M. tuberculosis-infected and culture filtrate protein-treated macrophages.", "pub_date": "2010 Sep", @@ -30173,8 +29351,7 @@ }, "27581223": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of KasA as the cellular target of an anti-tubercular scaffold.", "pub_date": "2016 Sep 1", @@ -30188,8 +29365,7 @@ }, "15917234": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Siroheme- and [Fe4-S4]-dependent NirA from Mycobacterium tuberculosis is a sulfite reductase with a covalent Cys-Tyr bond in the active site.", "pub_date": "2005 Jul 22", @@ -30203,8 +29379,7 @@ }, "11600501": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Purification and biochemical characterization of the Mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein synthases KasA and KasB.", "pub_date": "2001 Dec 14", @@ -30218,8 +29393,7 @@ }, "27751956": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of culture filtrate proteins Rv1197 and Rv1198 of ESAT-6 family from Mycobacterium tuberculosis H37Rv.", "pub_date": "2017 Feb", @@ -30233,8 +29407,7 @@ }, "15292272": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of three glycosyltransferases involved in the biosynthesis of the phenolic glycolipid antigens from the Mycobacterium tuberculosis complex.", "pub_date": "2004 Oct 8", @@ -30248,8 +29421,7 @@ }, "23420845": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A new way to degrade heme: the Mycobacterium tuberculosis enzyme MhuD catalyzes heme degradation without generating CO.", "pub_date": "2013 Apr 5", @@ -30263,8 +29435,7 @@ }, "20223818": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis origin of replication and the promoter for immunodominant secreted antigen 85B are the targets of MtrA, the essential response regulator.", "pub_date": "2010 May 21", @@ -30278,8 +29449,7 @@ }, "20694006": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis lipoprotein LprG (Rv1411c) binds triacylated glycolipid agonists of Toll-like receptor 2.", "pub_date": "2010 Sep", @@ -30293,8 +29463,7 @@ }, "23482562": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel P(1B)-type Mn2+-transporting ATPase is required for secreted protein metallation in mycobacteria.", "pub_date": "2013 Apr 19", @@ -30308,8 +29477,7 @@ }, "16045627": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis appears to lack alpha-ketoglutarate dehydrogenase and encodes pyruvate dehydrogenase in widely separated genes.", "pub_date": "2005 Aug", @@ -30323,8 +29491,7 @@ }, "15824123": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis strains possess functional cellulases.", "pub_date": "2005 May 27", @@ -30338,8 +29505,7 @@ }, "16876125": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "First functional characterization of a singly expressed bacterial type II topoisomerase: the enzyme from Mycobacterium tuberculosis.", "pub_date": "2006 Sep 15", @@ -30353,8 +29519,7 @@ }, "17028183": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the Mycobacterium tuberculosis P450 CYP121-fluconazole complex reveals new azole drug-P450 binding mode.", "pub_date": "2006 Dec 22", @@ -30368,8 +29533,7 @@ }, "10593963": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular cloning, sequencing, and expression of the gene encoding alkaline ceramidase from Pseudomonas aeruginosa. Cloning of a ceramidase homologue from Mycobacterium tuberculosis.", "pub_date": "1999 Dec 17", @@ -30383,8 +29547,7 @@ }, "22319448": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phagosomal rupture by Mycobacterium tuberculosis results in toxicity and host cell death.", "pub_date": "2012 Feb", @@ -30398,8 +29561,7 @@ }, "12071965": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis FprA, a novel bacterial NADPH-ferredoxin reductase.", "pub_date": "2002 Jun", @@ -30413,8 +29575,7 @@ }, "22621931": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation of mycobacterial PcaA inhibits mycolic acid cyclopropanation: consequences for intracellular survival and for phagosome maturation block.", "pub_date": "2012 Jul 27", @@ -30428,8 +29589,7 @@ }, "10027986": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Differential expression of 10 sigma factor genes in Mycobacterium tuberculosis.", "pub_date": "1999 Jan", @@ -30443,8 +29603,7 @@ }, "11278743": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the Mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein synthase III.", "pub_date": "2001 Jun 8", @@ -30458,8 +29617,7 @@ }, "34475399": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The cryo-EM structure of the bd oxidase from M. tuberculosis reveals a unique structural framework and enables rational drug design to combat TB.", "pub_date": "2021 Sep 2", @@ -30473,8 +29631,7 @@ }, "22686939": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "WhiB2/Rv3260c, a cell division-associated protein of Mycobacterium tuberculosis H37Rv, has properties of a chaperone.", "pub_date": "2012 Aug", @@ -30488,8 +29645,7 @@ }, "20363127": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and characterization of Mycobacterium tuberculosis methionine aminopeptidase type 1a.", "pub_date": "2010 May 1", @@ -30503,8 +29659,7 @@ }, "19234303": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of 3-ketosteroid 9{alpha}-hydroxylase, a Rieske oxygenase in the cholesterol degradation pathway of Mycobacterium tuberculosis.", "pub_date": "2009 Apr 10", @@ -30518,8 +29673,7 @@ }, "16258834": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Backbone NMR assignment of the low-molecular-weight protein tyrosine phosphatase (MPtpA) from Mycobacterium tuberculosis.", "pub_date": "2005 Oct", @@ -30533,8 +29687,7 @@ }, "15186418": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis protein serine/threonine kinase PknG is linked to cellular glutamate/glutamine levels and is important for growth in vivo.", "pub_date": "2004 Jun", @@ -30548,8 +29701,7 @@ }, "20148899": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis protein ESAT-6 is a potent activator of the NLRP3/ASC inflammasome.", "pub_date": "2010 Aug", @@ -30563,8 +29715,7 @@ }, "12511575": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of ATP phosphoribosyltransferase from Mycobacterium tuberculosis.", "pub_date": "2003 Mar 7", @@ -30578,8 +29729,7 @@ }, "16196020": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Discovery of Mycobacterium tuberculosis protein tyrosine phosphatase A (MptpA) inhibitors based on natural products and a fragment-based approach.", "pub_date": "2005 Oct", @@ -30593,8 +29743,7 @@ }, "17567578": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into catalysis and inhibition of O-acetylserine sulfhydrylase from Mycobacterium tuberculosis. Crystal structures of the enzyme alpha-aminoacrylate intermediate and an enzyme-inhibitor complex.", "pub_date": "2007 Aug 10", @@ -30608,8 +29757,7 @@ }, "24023821": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Directed evolution of Mycobacterium tuberculosis \u03b2-lactamase reveals gatekeeper residue that regulates antibiotic resistance and catalytic efficiency.", "pub_date": "2013", @@ -30623,8 +29771,7 @@ }, "22561013": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Conformational changes upon ligand binding in the essential class II fumarase Rv1098c from Mycobacterium tuberculosis.", "pub_date": "2012 Jun 4", @@ -30638,8 +29785,7 @@ }, "23835087": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Overexpression of the Rv0805 phosphodiesterase elicits a cAMP-independent transcriptional response.", "pub_date": "2013 Sep", @@ -30653,8 +29799,7 @@ }, "25605462": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Succinylome analysis reveals the involvement of lysine succinylation in metabolism in pathogenic Mycobacterium tuberculosis.", "pub_date": "2015 Apr", @@ -30682,8 +29827,7 @@ }, "18042675": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis LrpA, a leucine-responsive global regulator associated with starvation response.", "pub_date": "2008 Jan", @@ -30697,8 +29841,7 @@ }, "25039394": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "EspI regulates the ESX-1 secretion system in response to ATP levels in Mycobacterium tuberculosis.", "pub_date": "2014 Sep", @@ -30712,8 +29855,7 @@ }, "24907510": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterial 3-hydroxyacyl-l-thioester dehydratase Y derived from Mycobacterium tuberculosis induces COX-2 expression in mouse macrophages through MAPK-NF-\u03baB pathway.", "pub_date": "2014 Sep", @@ -30727,8 +29869,7 @@ }, "19412174": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Synthetic EthR inhibitors boost antituberculous activity of ethionamide.", "pub_date": "2009 May", @@ -30742,8 +29883,7 @@ }, "20227664": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis MycP1 protease plays a dual role in regulation of ESX-1 secretion and virulence.", "pub_date": "2010 Mar 18", @@ -30757,8 +29897,7 @@ }, "10080924": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis KatG is a peroxynitritase.", "pub_date": "1999 Mar 24", @@ -30772,8 +29911,7 @@ }, "12354223": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel Mycobacterium tuberculosis anti-sigma factor antagonists control sigmaF activity by distinct mechanisms.", "pub_date": "2002 Sep", @@ -30787,8 +29925,7 @@ }, "24564493": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into mode of actions of novel natural Mycobacterium protein tyrosine phosphatase B inhibitors.", "pub_date": "2014", @@ -30802,8 +29939,7 @@ }, "25469515": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Bacterial proteasome activator bpa (rv3780) is a novel ring-shaped interactor of the mycobacterial proteasome.", "pub_date": "2014", @@ -30817,8 +29953,7 @@ }, "20206184": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Unusual conformation of the SxN motif in the crystal structure of penicillin-binding protein A from Mycobacterium tuberculosis.", "pub_date": "2010 Apr 23", @@ -30832,8 +29967,7 @@ }, "24426166": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Prokaryotic Expression, Identification and Bioinformatics Analysis of the Mycobacterium tuberculosis Rv3807c Gene Encoding the Putative Enzyme Committed to Decaprenylphosphoryl-d-arabinose Synthesis.", "pub_date": "2014 Mar", @@ -30847,8 +29981,7 @@ }, "18423586": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Development of a coupled spectrophotometric assay for GlfT2, a bifunctional mycobacterial galactofuranosyltransferase.", "pub_date": "2008 Aug 11", @@ -30862,8 +29995,7 @@ }, "27568926": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis LppM Displays an Original Structure and Domain Composition Linked to a Dual Localization.", "pub_date": "2016 Oct 4", @@ -30877,8 +30009,7 @@ }, "17064366": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mutations in Mycobacterium tuberculosis Rv0444c, the gene encoding anti-SigK, explain high level expression of MPB70 and MPB83 in Mycobacterium bovis.", "pub_date": "2006 Dec", @@ -30892,8 +30023,7 @@ }, "24134223": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and biochemical characterization of the essential DsbA-like disulfide bond forming protein from Mycobacterium tuberculosis.", "pub_date": "2013 Oct 18", @@ -30907,8 +30037,7 @@ }, "22773105": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cyclic AMP regulation of protein lysine acetylation in Mycobacterium tuberculosis.", "pub_date": "2012 Aug", @@ -30922,8 +30051,7 @@ }, "28743871": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural analysis of the regulatory mechanism of MarR protein Rv2887 in M. tuberculosis.", "pub_date": "2017 Jul 25", @@ -30937,8 +30065,7 @@ }, "16434396": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structural basis of signal transduction for the response regulator PrrA from Mycobacterium tuberculosis.", "pub_date": "2006 Apr 7", @@ -30952,8 +30079,7 @@ }, "18329613": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Selective killing of nonreplicating mycobacteria.", "pub_date": "2008 Mar 13", @@ -30967,8 +30093,7 @@ }, "17319935": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel trehalase from Mycobacterium smegmatis - purification, properties, requirements.", "pub_date": "2007 Apr", @@ -30982,8 +30107,7 @@ }, "23102706": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "S-nitrosylation of Mycobacterium tuberculosis tyrosine phosphatase A (PtpA) induces its structural instability.", "pub_date": "2013 Jan", @@ -30997,8 +30121,7 @@ }, "18164314": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mechanism of dTTP inhibition of the bifunctional dCTP deaminase:dUTPase encoded by Mycobacterium tuberculosis.", "pub_date": "2008 Feb 15", @@ -31012,8 +30135,7 @@ }, "18808383": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Capsular glucan and intracellular glycogen of Mycobacterium tuberculosis: biosynthesis and impact on the persistence in mice.", "pub_date": "2008 Nov", @@ -31027,8 +30149,7 @@ }, "27220037": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "LppM impact on the colonization of macrophages by Mycobacterium tuberculosis.", "pub_date": "2017 Jan", @@ -31042,8 +30163,7 @@ }, "36777032": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "EphH, a unique epoxide hydrolase encoded by Rv3338 is involved in the survival of Mycobacterium tuberculosis under in vitro stress and vacuolar pH-induced changes.", "pub_date": "2022", @@ -31071,8 +30191,7 @@ }, "17919286": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A partner for the resuscitation-promoting factors of Mycobacterium tuberculosis.", "pub_date": "2007 Nov", @@ -31086,8 +30205,7 @@ }, "21698211": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Control of CydB and GltA1 expression by the SenX3 RegX3 two component regulatory system of Mycobacterium tuberculosis.", "pub_date": "2011", @@ -31101,8 +30219,7 @@ }, "20184899": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and biochemical bases for the redox sensitivity of Mycobacterium tuberculosis RslA.", "pub_date": "2010 Apr 16", @@ -31116,8 +30233,7 @@ }, "8921846": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An M. tuberculosis DNA fragment contains genes encoding cell division proteins ftsX and ftsE, a basic protein and homologues of PemK and small protein B.", "pub_date": "1996 Oct 24", @@ -31131,8 +30247,7 @@ }, "18793646": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis YefM antitoxin reveals that it is not an intrinsically unstructured protein.", "pub_date": "2008 Nov 14", @@ -31146,8 +30261,7 @@ }, "16040614": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Probing the mechanism of the Mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein synthase III mtFabH: factors influencing catalysis and substrate specificity.", "pub_date": "2005 Sep 16", @@ -31161,8 +30275,7 @@ }, "21134645": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Allosteric activation mechanism of the Mycobacterium tuberculosis receptor Ser/Thr protein kinase, PknB.", "pub_date": "2010 Dec 8", @@ -31176,8 +30289,7 @@ }, "23308068": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "4'-Phosphopantetheinyl transferase PptT, a new drug target required for Mycobacterium tuberculosis growth and persistence in vivo.", "pub_date": "2012 Dec", @@ -31191,8 +30303,7 @@ }, "26157429": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE11 (Rv1169c) selectively alters fatty acid components of Mycobacterium smegmatis and host cell interleukin-6 level accompanied with cell death.", "pub_date": "2015", @@ -31206,8 +30317,7 @@ }, "22094465": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional analysis of DNA replication fork reversal catalyzed by Mycobacterium tuberculosis RuvAB proteins.", "pub_date": "2012 Jan 6", @@ -31221,8 +30331,7 @@ }, "23178456": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "In-house UV radiation-damage-induced phasing of selenomethionine-labeled protein structures.", "pub_date": "2013 Feb", @@ -31236,8 +30345,7 @@ }, "28708968": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv3723/LucA coordinates fatty acid and cholesterol uptake in Mycobacterium tuberculosis.", "pub_date": "2017 Jun 27", @@ -31251,8 +30359,7 @@ }, "21445360": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The HtrA-like serine protease PepD interacts with and modulates the Mycobacterium tuberculosis 35-kDa antigen outer envelope protein.", "pub_date": "2011 Mar 22", @@ -31266,8 +30373,7 @@ }, "14698305": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of MshB from Mycobacterium tuberculosis, a deacetylase involved in mycothiol biosynthesis.", "pub_date": "2004 Jan 23", @@ -31281,8 +30387,7 @@ }, "11092877": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis cmaA2 gene encodes a mycolic acid trans-cyclopropane synthetase.", "pub_date": "2001 Jan 19", @@ -31296,8 +30401,7 @@ }, "16611633": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of mRNA interferases from Mycobacterium tuberculosis.", "pub_date": "2006 Jul 7", @@ -31311,8 +30415,7 @@ }, "26417687": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation of Mycobacterium tuberculosis protein tyrosine kinase A PtkA by Ser/Thr protein kinases.", "pub_date": "2015 Nov 13", @@ -31326,8 +30429,7 @@ }, "10747933": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Thiolactomycin and related analogues as novel anti-mycobacterial agents targeting KasA and KasB condensing enzymes in Mycobacterium tuberculosis.", "pub_date": "2000 Jun 2", @@ -31341,8 +30443,7 @@ }, "27758870": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Serine/Threonine Protein Phosphatase PstP of Mycobacterium tuberculosis Is Necessary for Accurate Cell Division and Survival of Pathogen.", "pub_date": "2016 Nov 11", @@ -31356,8 +30457,7 @@ }, "10200974": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inactivation of the antigen 85C gene profoundly affects the mycolate content and alters the permeability of the Mycobacterium tuberculosis cell envelope.", "pub_date": "1999 Mar", @@ -31386,8 +30486,7 @@ }, "17320106": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The catalysis of the 1,1-proton transfer by alpha-methyl-acyl-CoA racemase is coupled to a movement of the fatty acyl moiety over a hydrophobic, methionine-rich surface.", "pub_date": "2007 Apr 6", @@ -31401,8 +30500,7 @@ }, "15590681": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Competitive inhibitors of Mycobacterium tuberculosis ribose-5-phosphate isomerase B reveal new information about the reaction mechanism.", "pub_date": "2005 Feb 25", @@ -31416,8 +30514,7 @@ }, "16299590": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Stealth proteins: in silico identification of a novel protein family rendering bacterial pathogens invisible to host immune defense.", "pub_date": "2005 Nov", @@ -31431,8 +30528,7 @@ }, "15123643": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of PapA5, a phthiocerol dimycocerosyl transferase from Mycobacterium tuberculosis.", "pub_date": "2004 Jul 16", @@ -31446,8 +30542,7 @@ }, "12909628": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis MenB, a key enzyme in vitamin K2 biosynthesis.", "pub_date": "2003 Oct 24", @@ -31475,8 +30570,7 @@ }, "11914056": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A variable number of tandem repeats result in polymorphic alpha -isopropylmalate synthase in Mycobacterium tuberculosis.", "pub_date": "2002", @@ -31490,8 +30584,7 @@ }, "23913123": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Discovery of Q203, a potent clinical candidate for the treatment of tuberculosis.", "pub_date": "2013 Sep", @@ -31505,8 +30598,7 @@ }, "26398213": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification and Characterization of Lipase Activity and Immunogenicity of LipL from Mycobacterium tuberculosis.", "pub_date": "2015", @@ -31520,8 +30612,7 @@ }, "24113528": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Understanding specificity of the mycosin proteases in ESX/type VII secretion by structural and functional analysis.", "pub_date": "2013 Nov", @@ -31535,8 +30626,7 @@ }, "22539524": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Determination of ribonuclease sequence-specificity using Pentaprobes and mass spectrometry.", "pub_date": "2012 Jun", @@ -31550,8 +30640,7 @@ }, "10889206": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphatidylinositol is an essential phospholipid of mycobacteria.", "pub_date": "2000 Sep 29", @@ -31565,8 +30654,7 @@ }, "31125644": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv0518, a nutritive stress inducible GDSL lipase of Mycobacterium tuberculosis, enhanced intracellular survival of bacteria by cell wall modulation.", "pub_date": "2019 Aug 15", @@ -31580,8 +30668,7 @@ }, "25641595": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis EspB protein suppresses interferon-\u03b3-induced autophagy in murine macrophages.", "pub_date": "2016 Dec", @@ -31595,8 +30682,7 @@ }, "9607323": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical and phylogenetic analyses of methionyl-tRNA synthetase isolated from a pathogenic microorganism, Mycobacterium tuberculosis.", "pub_date": "1998 May 8", @@ -31610,8 +30696,7 @@ }, "16199660": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identifying putative Mycobacterium tuberculosis Rv2004c protein sequences that bind specifically to U937 macrophages and A549 epithelial cells.", "pub_date": "2005 Nov", @@ -31640,8 +30725,7 @@ }, "28250431": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel protein acetyltransferase, Rv2170, modulates carbon and energy metabolism in Mycobacterium tuberculosis.", "pub_date": "2017 Mar 6", @@ -31655,8 +30739,7 @@ }, "18059281": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "In vivo gene silencing identifies the Mycobacterium tuberculosis proteasome as essential for the bacteria to persist in mice.", "pub_date": "2007 Dec", @@ -31670,8 +30753,7 @@ }, "20507997": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "cAMP-regulated protein lysine acetylases in mycobacteria.", "pub_date": "2010 Aug 6", @@ -31685,8 +30767,7 @@ }, "10623528": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Three-dimensional structure of M. tuberculosis dihydrofolate reductase reveals opportunities for the design of novel tuberculosis drugs.", "pub_date": "2000 Jan 14", @@ -31700,8 +30781,7 @@ }, "21085642": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Portrait of a pathogen: the Mycobacterium tuberculosis proteome in vivo.", "pub_date": "2010 Nov 11", @@ -31715,8 +30795,7 @@ }, "18641659": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A membrane protein preserves intrabacterial pH in intraphagosomal Mycobacterium tuberculosis.", "pub_date": "2008 Aug", @@ -31730,8 +30809,7 @@ }, "9111927": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular cloning of the leuB genes from Mycobacterium bovis BCG and Mycobacterium tuberculosis.", "pub_date": "1997 Apr", @@ -31745,8 +30823,7 @@ }, "24281824": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and binding properties of the PASTA domain of PonA2, a key penicillin binding protein from Mycobacterium tuberculosis.", "pub_date": "2014 Jul", @@ -31760,8 +30837,7 @@ }, "22405030": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Potential selective inhibitors against Rv0183 of Mycobacterium tuberculosis targeting host lipid metabolism.", "pub_date": "2012 Jun", @@ -31775,8 +30851,7 @@ }, "21925112": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterial p(1)-type ATPases mediate resistance to zinc poisoning in human macrophages.", "pub_date": "2011 Sep 15", @@ -31790,8 +30865,7 @@ }, "38029253": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv1987 protein attenuates inflammatory response and consequently alters microbiota in mouse lung.", "pub_date": "2023", @@ -31805,8 +30879,7 @@ }, "21672513": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular, kinetic, thermodynamic, and structural analyses of Mycobacterium tuberculosis hisD-encoded metal-dependent dimeric histidinol dehydrogenase (EC 1.1.1.23).", "pub_date": "2011 Aug 15", @@ -31820,8 +30893,7 @@ }, "12473104": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Trehalose-phosphate synthase of Mycobacterium tuberculosis. Cloning, expression and properties of the recombinant enzyme.", "pub_date": "2002 Dec", @@ -31835,8 +30907,7 @@ }, "23588382": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of L,D-transpeptidase LdtMt2 in complex with meropenem reveals the mechanism of carbapenem against Mycobacterium tuberculosis.", "pub_date": "2013 May", @@ -31850,8 +30921,7 @@ }, "14617138": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Disruption of mptpB impairs the ability of Mycobacterium tuberculosis to survive in guinea pigs.", "pub_date": "2003 Nov", @@ -31865,8 +30935,7 @@ }, "12138124": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Role of the pks15/1 gene in the biosynthesis of phenolglycolipids in the Mycobacterium tuberculosis complex. Evidence that all strains synthesize glycosylated p-hydroxybenzoic methyl esters and that strains devoid of phenolglycolipids harbor a frameshift mutation in the pks15/1 gene.", "pub_date": "2002 Oct 11", @@ -31880,8 +30949,7 @@ }, "17076665": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A specific secretion system mediates PPE41 transport in pathogenic mycobacteria.", "pub_date": "2006 Nov", @@ -31895,8 +30963,7 @@ }, "18930129": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A transposon insertion mutant of Mycobacterium fortuitum attenuated in virulence and persistence in a murine infection model that is complemented by Rv3291c of Mycobacterium tuberculosis.", "pub_date": "2008 Nov-Dec", @@ -31910,8 +30977,7 @@ }, "22792304": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure-function relationships of the Mycobacterium tuberculosis transcription factor WhiB1.", "pub_date": "2012", @@ -31925,8 +30991,7 @@ }, "9729123": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning and expression of the gene coding for FtsH protease from Mycobacterium tuberculosis H37Rv.", "pub_date": "1998 Jul 3", @@ -31940,8 +31005,7 @@ }, "14610090": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The prodrug activator EtaA from Mycobacterium tuberculosis is a Baeyer-Villiger monooxygenase.", "pub_date": "2004 Jan 30", @@ -31955,8 +31019,7 @@ }, "19074144": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis beta-ketoacyl-acyl carrier protein synthase III activity is inhibited by phosphorylation on a single threonine residue.", "pub_date": "2009 Mar 6", @@ -31970,8 +31033,7 @@ }, "37634786": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv2324 is a multifunctional feast/famine regulatory protein involved in growth, DNA replication and damage control.", "pub_date": "2023 Dec 1", @@ -31985,8 +31047,7 @@ }, "24234750": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of an acid inducible lipase Rv3203 from Mycobacterium tuberculosis H37Rv.", "pub_date": "2014 Jan", @@ -32000,8 +31061,7 @@ }, "32197094": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A Preclinical Candidate Targeting Mycobacterium tuberculosis KasA.", "pub_date": "2020 May 21", @@ -32015,8 +31075,7 @@ }, "20844580": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "High content phenotypic cell-based visual screen identifies Mycobacterium tuberculosis acyltrehalose-containing glycolipids involved in phagosome remodeling.", "pub_date": "2010 Sep 9", @@ -32030,8 +31089,7 @@ }, "27156617": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning, expression and characterization of histidine-tagged biotin synthase of Mycobacterium tuberculosis.", "pub_date": "2016 May", @@ -32045,8 +31103,7 @@ }, "26456678": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mechanism of ESAT-6 membrane interaction and its roles in pathogenesis of Mycobacterium tuberculosis.", "pub_date": "2016 Jun 15", @@ -32060,8 +31117,7 @@ }, "22365605": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cholesterol catabolism by Mycobacterium tuberculosis requires transcriptional and metabolic adaptations.", "pub_date": "2012 Feb 24", @@ -32075,8 +31131,7 @@ }, "29979631": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis type III-A CRISPR/Cas system crRNA and its maturation have atypical features.", "pub_date": "2019 Jan", @@ -32090,8 +31145,7 @@ }, "17714444": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of an alpha(1-->6) mannopyranosyltransferase (MptA), involved in Corynebacterium glutamicum lipomanann biosynthesis, and identification of its orthologue in Mycobacterium tuberculosis.", "pub_date": "2007 Sep", @@ -32105,8 +31159,7 @@ }, "23486471": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Activation of ATP binding for the autophosphorylation of DosS, a Mycobacterium tuberculosis histidine kinase lacking an ATP lid motif.", "pub_date": "2013 May 3", @@ -32120,8 +31173,7 @@ }, "21451980": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "glpX gene of Mycobacterium tuberculosis: heterologous expression, purification, and enzymatic characterization of the encoded fructose 1,6-bisphosphatase II.", "pub_date": "2011 Aug", @@ -32135,8 +31187,7 @@ }, "17590082": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Transcriptional regulation of multi-drug tolerance and antibiotic-induced responses by the histone-like protein Lsr2 in M. tuberculosis.", "pub_date": "2007 Jun", @@ -32150,8 +31201,7 @@ }, "25450595": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the essential Mycobacterium tuberculosis phosphopantetheinyl transferase PptT, solved as a fusion protein with maltose binding protein.", "pub_date": "2014 Dec", @@ -32165,8 +31215,7 @@ }, "19836337": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights on the Mycobacterium tuberculosis proteasomal ATPase Mpa.", "pub_date": "2009 Oct 14", @@ -32180,8 +31229,7 @@ }, "21238944": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Virulence of Mycobacterium tuberculosis depends on lipoamide dehydrogenase, a member of three multienzyme complexes.", "pub_date": "2011 Jan 20", @@ -32195,8 +31243,7 @@ }, "24830429": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Hip1 modulates macrophage responses through proteolysis of GroEL2.", "pub_date": "2014 May", @@ -32210,8 +31257,7 @@ }, "14960574": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PimF, a mannosyltransferase of mycobacteria, is involved in the biosynthesis of phosphatidylinositol mannosides and lipoarabinomannan.", "pub_date": "2004 Apr 30", @@ -32225,8 +31271,7 @@ }, "21771781": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "ClpR protein-like regulator specifically recognizes RecA protein-independent promoter motif and broadly regulates expression of DNA damage-inducible genes in mycobacteria.", "pub_date": "2011 Sep 9", @@ -32240,8 +31285,7 @@ }, "17597075": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "High resolution crystal structures of Mycobacterium tuberculosis adenosine kinase: insights into the mechanism and specificity of this novel prokaryotic enzyme.", "pub_date": "2007 Sep 14", @@ -32255,8 +31299,7 @@ }, "19027363": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mce2R from Mycobacterium tuberculosis represses the expression of the mce2 operon.", "pub_date": "2009 Jan", @@ -32270,8 +31313,7 @@ }, "19270703": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Regulation of active site coupling in glutamine-dependent NAD(+) synthetase.", "pub_date": "2009 Apr", @@ -32285,8 +31327,7 @@ }, "16175359": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Gene expression profiling analysis of Mycobacterium tuberculosis genes in response to salicylate.", "pub_date": "2005 Nov", @@ -32300,8 +31341,7 @@ }, "36750726": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Omics analysis of Mycobacterium tuberculosis isolates uncovers Rv3094c, an ethionamide metabolism-associated gene.", "pub_date": "2023 Feb 7", @@ -32315,8 +31355,7 @@ }, "15373841": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and characterization of the protein Rv1399c from Mycobacterium tuberculosis. A novel carboxyl esterase structurally related to the HSL family.", "pub_date": "2004 Oct", @@ -32330,8 +31369,7 @@ }, "8843165": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a second Mycobacterium tuberculosis gene cluster encoding proteins of an ABC phosphate transporter.", "pub_date": "1996 Sep 30", @@ -32345,8 +31383,7 @@ }, "21170273": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Genome-wide screen for Mycobacterium tuberculosis genes that regulate host immunity.", "pub_date": "2010 Dec 10", @@ -32360,8 +31397,7 @@ }, "20600947": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Over-expression and purification strategies for recombinant multi-protein oligomers: a case study of Mycobacterium tuberculosis \u03c3/anti-\u03c3 factor protein complexes.", "pub_date": "2010 Dec", @@ -32375,8 +31411,7 @@ }, "19362712": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "TLR2 and its co-receptors determine responses of macrophages and dendritic cells to lipoproteins of Mycobacterium tuberculosis.", "pub_date": "2009", @@ -32390,8 +31425,7 @@ }, "21764637": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Base excision and nucleotide excision repair pathways in mycobacteria.", "pub_date": "2011 Nov", @@ -32405,8 +31439,7 @@ }, "22225784": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of Rv0535 as methylthioadenosine phosphorylase from Mycobacterium tuberculosis.", "pub_date": "2012 Mar", @@ -32420,8 +31453,7 @@ }, "1981088": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a Mycobacterium tuberculosis insertion sequence belonging to the IS3 family.", "pub_date": "1990 Sep", @@ -32435,8 +31467,7 @@ }, "18420147": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Separate entrance and exit portals for ligand traffic in Mycobacterium tuberculosis FabH.", "pub_date": "2008 Apr", @@ -32450,8 +31481,7 @@ }, "18474359": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis senses host-derived carbon monoxide during macrophage infection.", "pub_date": "2008 May 15", @@ -32465,8 +31495,7 @@ }, "22340629": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Disruption of the ESX-5 system of Mycobacterium tuberculosis causes loss of PPE protein secretion, reduction of cell wall integrity and strong attenuation.", "pub_date": "2012 Mar", @@ -32480,8 +31509,7 @@ }, "17286964": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel substrates of Mycobacterium tuberculosis PknH Ser/Thr kinase.", "pub_date": "2007 Mar 30", @@ -32495,8 +31523,7 @@ }, "25356553": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The ESAT-6 protein of Mycobacterium tuberculosis interacts with beta-2-microglobulin (\u03b22M) affecting antigen presentation function of macrophage.", "pub_date": "2014 Oct", @@ -32510,8 +31537,7 @@ }, "15620716": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the conserved hypothetical protein Rv1155 from Mycobacterium tuberculosis.", "pub_date": "2005 Jan 3", @@ -32525,8 +31551,7 @@ }, "28469974": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the essential biotin-dependent carboxylase AccA3 from Mycobacterium tuberculosis.", "pub_date": "2017 May", @@ -32540,8 +31565,7 @@ }, "16674948": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of PknB in complex with mitoxantrone, an ATP-competitive inhibitor, suggests a mode of protein kinase regulation in mycobacteria.", "pub_date": "2006 May 29", @@ -32555,8 +31579,7 @@ }, "20705495": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "\"Depupylation\" of prokaryotic ubiquitin-like protein from mycobacterial proteasome substrates.", "pub_date": "2010 Sep 10", @@ -32570,8 +31593,7 @@ }, "26672466": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a novel esterase Rv1497 of Mycobacterium tuberculosisH37Rv demonstrating \u03b2-lactamase activity.", "pub_date": "2016 Jan", @@ -32585,8 +31607,7 @@ }, "21514309": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Sequence and structural characterization of tbnat gene in isoniazid-resistant Mycobacterium tuberculosis: identification of new mutations.", "pub_date": "2011 Jul 1", @@ -32600,8 +31621,7 @@ }, "16716602": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and purification of the Mycobacterium tuberculosis complex-restricted antigen CFP21 to study its immunoprophylactic potential in mouse model.", "pub_date": "2006 Aug", @@ -32615,8 +31635,7 @@ }, "17588829": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Substrate specificities and functional characterization of a thermo-tolerant uracil DNA glycosylase (UdgB) from Mycobacterium tuberculosis.", "pub_date": "2007 Oct 1", @@ -32630,8 +31649,7 @@ }, "8440471": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning of the lysA gene from Mycobacterium tuberculosis.", "pub_date": "1993 Feb 14", @@ -32645,8 +31663,7 @@ }, "20957207": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a novel esterase Rv0045c from Mycobacterium tuberculosis.", "pub_date": "2010 Oct 1", @@ -32660,8 +31677,7 @@ }, "22375954": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Analysis of intracellular expressed proteins of Mycobacterium tuberculosis clinical isolates.", "pub_date": "2012 Mar 1", @@ -32675,8 +31691,7 @@ }, "18685700": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Secreted transcription factor controls Mycobacterium tuberculosis virulence.", "pub_date": "2008 Aug 7", @@ -32690,8 +31705,7 @@ }, "20633027": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis employs Cpn60.2 as an adhesin that binds CD43 on the macrophage surface.", "pub_date": "2010 Nov", @@ -32705,8 +31719,7 @@ }, "19183278": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycolic acid methyltransferase, MmaA4, is necessary for thiacetazone susceptibility in Mycobacterium tuberculosis.", "pub_date": "2009 Mar", @@ -32720,8 +31733,7 @@ }, "23085165": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Targeting essential cell wall lipase Rv3802c for potential therapeutics against tuberculosis.", "pub_date": "2012 Sep", @@ -32735,8 +31747,7 @@ }, "24667597": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv1027c-Rv1028c encode functional KdpDE two--component system in Mycobacterium tuberculosis.", "pub_date": "2014 Apr 18", @@ -32750,8 +31761,7 @@ }, "35175661": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The C-terminal end of mycobacterial HadBC regulates AcpM interaction during the FAS-II pathway: a structural perspective.", "pub_date": "2022 Aug", @@ -32765,8 +31775,7 @@ }, "19846552": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Structure of Mycobacterium tuberculosis CYP125: molecular basis for cholesterol binding in a P450 needed for host infection.", "pub_date": "2009 Dec 18", @@ -32780,8 +31789,7 @@ }, "20223296": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Single nucleotide polymorphisms in cell wall biosynthesis-associated genes and phylogeny of Mycobacterium tuberculosis lineages.", "pub_date": "2010 May", @@ -32795,8 +31803,7 @@ }, "16403515": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A structural basis for the role of nucleotide specifying residues in regulating the oligomerization of the Rv1625c adenylyl cyclase from M. tuberculosis.", "pub_date": "2006 Mar 3", @@ -32810,8 +31817,7 @@ }, "17371506": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular dissection of the biosynthetic relationship between phthiocerol and phthiodiolone dimycocerosates and their critical role in the virulence and permeability of Mycobacterium tuberculosis.", "pub_date": "2007 Apr", @@ -32825,8 +31831,7 @@ }, "19177358": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Backbone structure of a small helical integral membrane protein: A unique structural characterization.", "pub_date": "2009 Jan", @@ -32840,8 +31845,7 @@ }, "21867916": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional plasticity and allosteric regulation of \u03b1-ketoglutarate decarboxylase in central mycobacterial metabolism.", "pub_date": "2011 Aug 26", @@ -32855,8 +31859,7 @@ }, "16212940": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical characterization of recombinant phosphoglucose isomerase of Mycobacterium tuberculosis.", "pub_date": "2005 Nov 18", @@ -32870,8 +31873,7 @@ }, "20656688": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Tetrahydrolipstatin inhibition, functional analyses, and three-dimensional structure of a lipase essential for mycobacterial viability.", "pub_date": "2010 Sep 24", @@ -32885,8 +31887,7 @@ }, "22118677": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Bisubstrate adenylation inhibitors of biotin protein ligase from Mycobacterium tuberculosis.", "pub_date": "2011 Nov 23", @@ -32900,8 +31901,7 @@ }, "9006925": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Overexpression, purification, and characterization of the catalase-peroxidase KatG from Mycobacterium tuberculosis.", "pub_date": "1997 Jan 31", @@ -32915,8 +31915,7 @@ }, "36739922": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Late stage specific Rv0109 (PE_PGRS1) protein of Mycobacterium tuberculosis induces mitochondria mediated macrophage apoptosis.", "pub_date": "2023 Mar", @@ -32930,8 +31929,7 @@ }, "21829358": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The extracytoplasmic domain of the Mycobacterium tuberculosis Ser/Thr kinase PknB binds specific muropeptides and is required for PknB localization.", "pub_date": "2011 Jul", @@ -32945,8 +31943,7 @@ }, "23827809": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PPE protein Rv0256c induces strong B cell response in tuberculosis patients.", "pub_date": "2014 Mar", @@ -32960,8 +31957,7 @@ }, "12366866": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycosin-1, a subtilisin-like serine protease of Mycobacterium tuberculosis, is cell wall-associated and expressed during infection of macrophages.", "pub_date": "2002 Oct 7", @@ -32975,8 +31971,7 @@ }, "16213520": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A GAF domain in the hypoxia/NO-inducible Mycobacterium tuberculosis DosS protein binds haem.", "pub_date": "2005 Nov 11", @@ -32990,8 +31985,7 @@ }, "9142129": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The emb operon, a gene cluster of Mycobacterium tuberculosis involved in resistance to ethambutol.", "pub_date": "1997 May", @@ -33005,8 +31999,7 @@ }, "21883526": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Atypical DNA recognition mechanism used by the EspR virulence regulator of Mycobacterium tuberculosis.", "pub_date": "2011 Oct", @@ -33020,8 +32013,7 @@ }, "36071978": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "HupB, a nucleoid-associated protein, is critical for survival of Mycobacterium tuberculosis under host-mediated stresses and for enhanced tolerance to key first-line antibiotics.", "pub_date": "2022", @@ -33035,8 +32027,7 @@ }, "38501428": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical and structural characterization reveals Rv3400 codes for \u03b2-phosphoglucomutase in Mycobacterium tuberculosis.", "pub_date": "2024 Apr", @@ -33050,8 +32041,7 @@ }, "22069311": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The mycobacterial transcriptional regulator whiB7 gene links redox homeostasis and intrinsic antibiotic resistance.", "pub_date": "2012 Jan 2", @@ -33065,8 +32055,7 @@ }, "19636956": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "NMR assignment and secondary structure of the STAS domain of Rv1739c, a putative sulfate transporter of Mycobacterium tuberculosis.", "pub_date": "2009 Jun", @@ -33080,8 +32069,7 @@ }, "26097035": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Thiophenecarboxamide Derivatives Activated by EthA Kill Mycobacterium tuberculosis by Inhibiting the CTP Synthetase PyrG.", "pub_date": "2015 Jul 23", @@ -33095,8 +32083,7 @@ }, "27094446": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A putative nitroreductase from the DosR regulon of Mycobacterium tuberculosis induces pro-inflammatory cytokine expression via TLR2 signaling pathway.", "pub_date": "2016 Apr 20", @@ -33110,8 +32097,7 @@ }, "19362594": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Hypoxanthine-guanine phosphoribosyltransferase from Mycobacterium tuberculosis H37Rv: cloning, expression, and biochemical characterization.", "pub_date": "2009 Aug", @@ -33125,8 +32111,7 @@ }, "16337227": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of TrpD, a metabolic enzyme essential for lung colonization by Mycobacterium tuberculosis, in complex with its substrate phosphoribosylpyrophosphate.", "pub_date": "2006 Jan 27", @@ -33140,8 +32125,7 @@ }, "26546727": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "In silico and experimental validation of protein-protein interactions between PknI and Rv2159c from Mycobacterium tuberculosis.", "pub_date": "2015 Nov", @@ -33155,8 +32139,7 @@ }, "26270534": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Modulation of the Activity of Mycobacterium tuberculosis LipY by Its PE Domain.", "pub_date": "2015", @@ -33170,8 +32153,7 @@ }, "21782791": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An ArsR-like transcriptional factor recognizes a conserved sequence motif and positively regulates the expression of phoP in mycobacteria.", "pub_date": "2011 Aug 12", @@ -33185,8 +32167,7 @@ }, "10934214": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biosynthesis of the galactan component of the mycobacterial cell wall.", "pub_date": "2000 Oct 27", @@ -33200,8 +32181,7 @@ }, "24706757": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Protein kinase B (PknB) of Mycobacterium tuberculosis is essential for growth of the pathogen in vitro as well as for survival within the host.", "pub_date": "2014 May 16", @@ -33215,8 +32195,7 @@ }, "23364516": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Assay development for identifying inhibitors of the mycobacterial FadD32 activity.", "pub_date": "2013 Jun", @@ -33230,8 +32209,7 @@ }, "33618255": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A new twist of rubredoxin function in M. tuberculosis.", "pub_date": "2021 Apr", @@ -33245,8 +32223,7 @@ }, "16256441": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Protein kinase I of Mycobacterium tuberculosis: cellular localization and expression during infection of macrophage-like cells.", "pub_date": "2006 Jan", @@ -33260,8 +32237,7 @@ }, "18479968": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterizing septum inhibition in Mycobacterium tuberculosis for novel drug discovery.", "pub_date": "2008 Sep", @@ -33275,8 +32251,7 @@ }, "15225619": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the biologically active form of class Ib ribonucleotide reductase small subunit from Mycobacterium tuberculosis.", "pub_date": "2004 Jul 2", @@ -33290,8 +32265,7 @@ }, "23286234": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Kinetic mechanism and inhibition of Mycobacterium tuberculosis D-alanine:D-alanine ligase by the antibiotic D-cycloserine.", "pub_date": "2013 Feb", @@ -33305,8 +32279,7 @@ }, "22427668": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Proline-proline-glutamic acid (PPE) protein Rv1168c of Mycobacterium tuberculosis augments transcription from HIV-1 long terminal repeat promoter.", "pub_date": "2012 May 11", @@ -33320,8 +32293,7 @@ }, "11152452": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Purification, enzymatic characterization, and inhibition of the Z-farnesyl diphosphate synthase from Mycobacterium tuberculosis.", "pub_date": "2001 Apr 13", @@ -33335,8 +32307,7 @@ }, "20512795": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inhibition studies of Mycobacterium tuberculosis salicylate synthase (MbtI).", "pub_date": "2010 Jul 5", @@ -33350,8 +32321,7 @@ }, "12919853": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Comparative proteome analysis of culture supernatant proteins of Mycobacterium tuberculosis H37Rv and H37Ra.", "pub_date": "2003 Aug", @@ -33365,8 +32335,7 @@ }, "1906192": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Lipoprotein antigens of Mycobacterium tuberculosis.", "pub_date": "1991 Jan", @@ -33380,8 +32349,7 @@ }, "11007651": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis 7,8-dihydropteroate synthase in complex with pterin monophosphate: new insight into the enzymatic mechanism and sulfa-drug action.", "pub_date": "2000 Oct 6", @@ -33395,8 +32363,7 @@ }, "23038254": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A small multidrug resistance-like transporter involved in the arabinosylation of arabinogalactan and lipoarabinomannan in mycobacteria.", "pub_date": "2012 Nov 16", @@ -33410,8 +32377,7 @@ }, "8733228": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Organization of the origins of replication of the chromosomes of Mycobacterium smegmatis, Mycobacterium leprae and Mycobacterium tuberculosis and isolation of a functional origin from M. smegmatis.", "pub_date": "1996 Apr", @@ -33425,8 +32391,7 @@ }, "22707726": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Tetrameric structure of the GlfT2 galactofuranosyltransferase reveals a scaffold for the assembly of mycobacterial Arabinogalactan.", "pub_date": "2012 Aug 10", @@ -33440,8 +32405,7 @@ }, "15177288": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning, overexpression, and characterization of a serine/threonine protein kinase pknI from Mycobacterium tuberculosis H37Rv.", "pub_date": "2004 Jul", @@ -33455,8 +32419,7 @@ }, "18390551": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Function and structure of a prokaryotic formylglycine-generating enzyme.", "pub_date": "2008 Jul 18", @@ -33470,8 +32433,7 @@ }, "27729224": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of the CO and NOBound DosS GAF-A domain and implications for DosS signaling in Mycobacterium tuberculosis.", "pub_date": "2016 Dec 15", @@ -33485,8 +32447,7 @@ }, "26439698": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PPE26 induces TLR2-dependent activation of macrophages and drives Th1-type T-cell immunity by triggering the cross-talk of multiple pathways involved in the host response.", "pub_date": "2015 Nov 17", @@ -33500,8 +32461,7 @@ }, "19747094": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning and characterization of NAD-dependent protein deacetylase (Rv1151c) from Mycobacterium tuberculosis.", "pub_date": "2009 Jul", @@ -33515,8 +32475,7 @@ }, "21474448": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and functional characterization of Rv2966c protein reveals an RsmD-like methyltransferase from Mycobacterium tuberculosis and the role of its N-terminal domain in target recognition.", "pub_date": "2011 Jun 3", @@ -33530,8 +32489,7 @@ }, "17376702": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression, purification and crystallization of native and selenomethionine labeled Mycobacterium tuberculosis FGD1 (Rv0407) using a Mycobacterium smegmatis expression system.", "pub_date": "2007 Jul", @@ -33545,8 +32503,7 @@ }, "16950391": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Direct evidence for a glutamate switch necessary for substrate recognition: crystal structures of lysine epsilon-aminotransferase (Rv3290c) from Mycobacterium tuberculosis H37Rv.", "pub_date": "2006 Oct 6", @@ -33560,8 +32517,7 @@ }, "9426136": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of novel intergenic repetitive units in a mycobacterial two-component system operon.", "pub_date": "1997 Dec", @@ -33575,8 +32531,7 @@ }, "22925462": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Composition of the type VII secretion system membrane complex.", "pub_date": "2012 Oct", @@ -33590,8 +32545,7 @@ }, "8095569": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Detection of rifampicin-resistance mutations in Mycobacterium tuberculosis.", "pub_date": "1993 Mar 13", @@ -33605,8 +32559,7 @@ }, "32888991": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and thermodynamic characterization of a highly stable conformation of Rv2966c, a 16S rRNA methyltransferase, at low pH.", "pub_date": "2020 Dec 1", @@ -33620,8 +32573,7 @@ }, "24709835": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An RNA-seq method for defining endoribonuclease cleavage specificity identifies dual rRNA substrates for toxin MazF-mt3.", "pub_date": "2014 Apr 8", @@ -33635,8 +32587,7 @@ }, "11278910": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis pks2 gene encodes the synthase for the hepta- and octamethyl-branched fatty acids required for sulfolipid synthesis.", "pub_date": "2001 May 18", @@ -33650,8 +32601,7 @@ }, "21443791": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular modeling and in silico characterization of Mycobacterium tuberculosis TlyA: possible misannotation of this tubercle bacilli-hemolysin.", "pub_date": "2011 Mar 28", @@ -33665,8 +32615,7 @@ }, "20889498": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and biochemical characterization of Mycobacterium tuberculosis CYP142: evidence for multiple cholesterol 27-hydroxylase activities in a human pathogen.", "pub_date": "2010 Dec 3", @@ -33680,8 +32629,7 @@ }, "12072441": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "5'-adenosinephosphosulfate lies at a metabolic branch point in mycobacteria.", "pub_date": "2002 Sep 6", @@ -33695,8 +32643,7 @@ }, "38491273": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural analysis of phosphoribosyltransferase-mediated cell wall precursor synthesis in Mycobacterium tuberculosis.", "pub_date": "2024 Apr", @@ -33710,8 +32657,7 @@ }, "10970762": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a two-component system, devR-devS, of Mycobacterium tuberculosis.", "pub_date": "2000", @@ -33725,8 +32671,7 @@ }, "17005450": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a Mycobacterium tuberculosis mutant deficient in pH-sensing adenylate cyclase Rv1264.", "pub_date": "2006 Dec", @@ -33740,8 +32685,7 @@ }, "19801656": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A mycobacterial cyclic AMP phosphodiesterase that moonlights as a modifier of cell wall permeability.", "pub_date": "2009 Nov 20", @@ -33755,8 +32699,7 @@ }, "15629142": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "NAD-binding mode and the significance of intersubunit contact revealed by the crystal structure of Mycobacterium tuberculosis NAD kinase-NAD complex.", "pub_date": "2005 Feb 11", @@ -33770,8 +32713,7 @@ }, "20305657": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Self-poisoning of Mycobacterium tuberculosis by targeting GlgE in an alpha-glucan pathway.", "pub_date": "2010 May", @@ -33785,8 +32727,7 @@ }, "22719899": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of the oligomerization domain of Lsr2 from Mycobacterium tuberculosis reveals a mechanism for chromosome organization and protection.", "pub_date": "2012", @@ -33800,8 +32741,7 @@ }, "11162078": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Detection of embB codon 306 mutations in ethambutol resistant Mycobacterium tuberculosis directly from sputum samples: a low-cost, rapid approach.", "pub_date": "2001 Feb", @@ -33815,8 +32755,7 @@ }, "24424575": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the transcriptional regulator Rv1219c of Mycobacterium tuberculosis.", "pub_date": "2014 Apr", @@ -33830,8 +32769,7 @@ }, "12761216": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The mechanism of Mycobacterium tuberculosis alkylhydroperoxidase AhpD as defined by mutagenesis, crystallography, and kinetics.", "pub_date": "2003 Aug 8", @@ -33845,8 +32783,7 @@ }, "17292400": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The three-dimensional structure of N-succinyldiaminopimelate aminotransferase from Mycobacterium tuberculosis.", "pub_date": "2007 Mar 30", @@ -33860,8 +32797,7 @@ }, "17961594": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and binding studies of the three-metal center in two mycobacterial PPM Ser/Thr protein phosphatases.", "pub_date": "2007 Dec 7", @@ -33875,8 +32811,7 @@ }, "25041568": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Specific interaction between Mycobacterium tuberculosis lipoprotein-derived peptides and target cells inhibits mycobacterial entry in vitro.", "pub_date": "2014 Dec", @@ -33890,8 +32825,7 @@ }, "15939293": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and characterization of the carboxyl esterase Rv3487c from Mycobacterium tuberculosis.", "pub_date": "2005 Jul", @@ -33905,8 +32839,7 @@ }, "17434492": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Probing the nucleotide binding and phosphorylation by the histidine kinase of a novel three-protein two-component system from Mycobacterium tuberculosis.", "pub_date": "2007 May 1", @@ -33920,8 +32853,7 @@ }, "10636862": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A cooperative oxygen binding hemoglobin from Mycobacterium tuberculosis. Stabilization of heme ligands by a distal tyrosine residue.", "pub_date": "2000 Jan 21", @@ -33935,8 +32867,7 @@ }, "31036822": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A Mycobacterium tuberculosis surface protein recruits ubiquitin to trigger host xenophagy.", "pub_date": "2019 Apr 29", @@ -33950,8 +32881,7 @@ }, "29134265": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Deletion of the \u03b2-Propeller Protein Gene Rv1057 Reduces ESAT-6 Secretion and Intracellular Growth of Mycobacterium tuberculosis.", "pub_date": "2018 Apr", @@ -33965,8 +32895,7 @@ }, "12551895": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the catalytic domain of the PknB serine/threonine kinase from Mycobacterium tuberculosis.", "pub_date": "2003 Apr 11", @@ -33980,8 +32909,7 @@ }, "26772148": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Rv2258c from Mycobacterium tuberculosis H37Rv, an S-adenosyl-l-methionine-dependent methyltransferase.", "pub_date": "2016 Mar", @@ -33995,8 +32923,7 @@ }, "18509457": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Ligand specificity of group I biotin protein ligase of Mycobacterium tuberculosis.", "pub_date": "2008 May 28", @@ -34010,8 +32937,7 @@ }, "15358538": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystallographic studies of shikimate binding and induced conformational changes in Mycobacterium tuberculosis shikimate kinase.", "pub_date": "2004 Sep 10", @@ -34025,8 +32951,7 @@ }, "8674528": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "X-ray structure analysis of an engineered Fe-superoxide dismutase Gly-Ala mutant with significantly reduced stability to denaturant.", "pub_date": "1996 Jun 3", @@ -34040,8 +32965,7 @@ }, "28712808": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural Insight into the Activation of PknI Kinase from M.\u00a0tuberculosis via Dimerization of the Extracellular Sensor Domain.", "pub_date": "2017 Aug 1", @@ -34055,8 +32979,7 @@ }, "16459102": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of chorismate synthase from Mycobacterium tuberculosis.", "pub_date": "2006 May", @@ -34070,8 +32993,7 @@ }, "21914799": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of Streptomyces maltosyltransferase GlgE, a homologue of a genetically validated anti-tuberculosis target.", "pub_date": "2011 Nov 4", @@ -34085,8 +33007,7 @@ }, "23438087": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Evidence for the role of Mycobacterium\u00a0tuberculosis RecG helicase in DNA repair and recombination.", "pub_date": "2013 Apr", @@ -34100,8 +33021,7 @@ }, "10881194": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of NusB from Mycobacterium tuberculosis.", "pub_date": "2000 Jun", @@ -34115,8 +33035,7 @@ }, "18490451": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biosynthesis and recycling of nicotinamide cofactors in mycobacterium tuberculosis. An essential role for NAD in nonreplicating bacilli.", "pub_date": "2008 Jul 11", @@ -34130,8 +33049,7 @@ }, "19197369": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phthiocerol dimycocerosates of M. tuberculosis participate in macrophage invasion by inducing changes in the organization of plasma membrane lipids.", "pub_date": "2009 Feb", @@ -34145,8 +33063,7 @@ }, "28219528": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv1987 induces Th2 immune responses and enhances Mycobacterium smegmatis survival in mice.", "pub_date": "2017 Apr", @@ -34174,8 +33091,7 @@ }, "30792174": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An NAD(+) Phosphorylase Toxin Triggers Mycobacterium tuberculosis Cell Death.", "pub_date": "2019 Mar 21", @@ -34189,8 +33105,7 @@ }, "25128581": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Roles of the two type II NADH dehydrogenases in the survival of Mycobacterium tuberculosis in vitro.", "pub_date": "2014 Oct 15", @@ -34204,8 +33119,7 @@ }, "11743725": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the transcription elongation/anti-termination factor NusA from Mycobacterium tuberculosis at 1.7 A resolution.", "pub_date": "2001 Dec 14", @@ -34219,8 +33133,7 @@ }, "28842489": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural basis of the PE-PPE protein interaction in Mycobacterium tuberculosis.", "pub_date": "2017 Oct 13", @@ -34234,8 +33147,7 @@ }, "23760274": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Radiation-sensitive gene A (RadA) targets DisA, DNA integrity scanning protein A, to negatively affect cyclic Di-AMP synthesis activity in Mycobacterium smegmatis.", "pub_date": "2013 Aug 2", @@ -34249,8 +33161,7 @@ }, "28669536": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Development of a Novel Lead that Targets M.\u00a0tuberculosis Polyketide Synthase 13.", "pub_date": "2017 Jul 13", @@ -34264,8 +33175,7 @@ }, "22354968": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Growth and translation inhibition through sequence-specific RNA binding by Mycobacterium tuberculosis VapC toxin.", "pub_date": "2012 Apr 13", @@ -34279,8 +33189,7 @@ }, "11967065": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Are the PE-PGRS proteins of Mycobacterium tuberculosis variable surface antigens?", "pub_date": "2002 Apr", @@ -34294,8 +33203,7 @@ }, "31098408": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of Mycobacterium tuberculosis phosphatidylinositol phosphate synthase reveals mechanism of substrate binding and metal catalysis.", "pub_date": "2019", @@ -34309,8 +33217,7 @@ }, "12637582": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of Mycobacterium tuberculosis diaminopimelate decarboxylase, an essential enzyme in bacterial lysine biosynthesis.", "pub_date": "2003 May 16", @@ -34324,8 +33231,7 @@ }, "20837474": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Src homology 3-interacting domain of Rv1917c of Mycobacterium tuberculosis induces selective maturation of human dendritic cells by regulating PI3K-MAPK-NF-kappaB signaling and drives Th2 immune responses.", "pub_date": "2010 Nov 19", @@ -34339,8 +33245,7 @@ }, "34019937": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Correlation of over-expression of rv1900c with enhanced survival of M. smegmatis under stress conditions: Modulation of cell surface properties.", "pub_date": "2021 Jul 30", @@ -34354,8 +33259,7 @@ }, "30978223": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of MenA (isoprenyl diphosphate:1,4-dihydroxy-2-naphthoate isoprenyltransferase) from Mycobacterium tuberculosis.", "pub_date": "2019", @@ -34369,8 +33273,7 @@ }, "33378640": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural analysis of Mycobacterium tuberculosis M13 metalloprotease Zmp1 open states.", "pub_date": "2021 Jul 1", @@ -34384,8 +33287,7 @@ }, "28203522": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mass spectral determination of phosphopantetheinylation specificity for carrier proteins in Mycobacterium tuberculosis.", "pub_date": "2016 Dec", @@ -34399,8 +33301,7 @@ }, "20624225": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "CtpV: a putative copper exporter required for full virulence of Mycobacterium tuberculosis.", "pub_date": "2010 Sep", @@ -34414,8 +33315,7 @@ }, "16111681": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of acetohydroxyacid synthase from Mycobacterium tuberculosis and the identification of its new inhibitor from the screening of a chemical library.", "pub_date": "2005 Aug 29", @@ -34429,8 +33329,7 @@ }, "39948061": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into transcription regulation of the global OmpR/PhoB family regulator PhoP from Mycobacterium tuberculosis.", "pub_date": "2025 Feb 13", @@ -34444,8 +33343,7 @@ }, "25924579": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural views of quinone oxidoreductase from Mycobacterium\u00a0tuberculosis reveal large conformational changes induced by the co-factor.", "pub_date": "2015 Jul", @@ -34459,8 +33357,7 @@ }, "18491387": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of the Mycobacterium tuberculosis secretory antigen alanine dehydrogenase (Rv2780) in apo and ternary complex forms captures \"open\" and \"closed\" enzyme conformations.", "pub_date": "2008 Aug 15", @@ -34474,8 +33371,7 @@ }, "19876393": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "High content screening identifies decaprenyl-phosphoribose 2' epimerase as a target for intracellular antimycobacterial inhibitors.", "pub_date": "2009 Oct", @@ -34489,8 +33385,7 @@ }, "23922883": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Integration host factor of Mycobacterium tuberculosis, mIHF, compacts DNA by a bending mechanism.", "pub_date": "2013", @@ -34504,8 +33399,7 @@ }, "12473649": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Tracking the putative biosynthetic precursors of oxygenated mycolates of Mycobacterium tuberculosis. Structural analysis of fatty acids of a mutant strain deviod of methoxy- and ketomycolates.", "pub_date": "2003 Feb 28", @@ -34519,8 +33413,7 @@ }, "26650245": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Correction: LprG-Mediated Surface Expression of Lipoarabinomannan Is Essential for Virulence of Mycobacterium tuberculosis.", "pub_date": "2015 Dec", @@ -34534,8 +33427,7 @@ }, "19604470": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "KasA, another brick in the mycobacterial cell wall.", "pub_date": "2009 Jul 15", @@ -34549,8 +33441,7 @@ }, "19787774": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the DNA gyrase GyrA N-terminal domain from Mycobacterium tuberculosis.", "pub_date": "2010 Feb 1", @@ -34564,8 +33455,7 @@ }, "20448045": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A flavin-dependent monooxygenase from Mycobacterium tuberculosis involved in cholesterol catabolism.", "pub_date": "2010 Jul 16", @@ -34579,8 +33469,7 @@ }, "20947023": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insight into serine protease Rv3671c that Protects M. tuberculosis from oxidative and acidic stress.", "pub_date": "2010 Oct 13", @@ -34594,8 +33483,7 @@ }, "26362239": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the Mycobacterium tuberculosis transcriptional regulator Rv0302.", "pub_date": "2015 Dec", @@ -34609,8 +33497,7 @@ }, "34894561": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biophysical analysis of the Mycobacteria tuberculosis peptide binding protein DppA reveals a stringent peptide binding pocket.", "pub_date": "2022 Jan", @@ -34624,8 +33511,7 @@ }, "17001646": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of uncleaved L-aspartate-alpha-decarboxylase from Mycobacterium tuberculosis.", "pub_date": "2006 Dec 1", @@ -34639,8 +33525,7 @@ }, "25644473": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular insights into the binding of coenzyme F420 to the conserved protein Rv1155 from Mycobacterium tuberculosis.", "pub_date": "2015 May", @@ -34668,8 +33553,7 @@ }, "22719925": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis DosR regulon gene Rv0079 encodes a putative, 'dormancy associated translation inhibitor (DATIN)'.", "pub_date": "2012", @@ -34683,8 +33567,7 @@ }, "10844652": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Oxygenated mycolic acids are necessary for virulence of Mycobacterium tuberculosis in mice.", "pub_date": "2000 May", @@ -34698,8 +33581,7 @@ }, "24106131": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Chemical and structural insights into the regioversatility of the aminoglycoside acetyltransferase Eis.", "pub_date": "2013 Nov 4", @@ -34713,8 +33595,7 @@ }, "23708146": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Putative roles of a proline-glutamic acid-rich protein (PE3) in intracellular survival and as a candidate for subunit vaccine against Mycobacterium tuberculosis.", "pub_date": "2013 Oct", @@ -34728,8 +33609,7 @@ }, "15748981": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Glutamine amidotransferase activity of NAD+ synthetase from Mycobacterium tuberculosis depends on an amino-terminal nitrilase domain.", "pub_date": "2005 Mar", @@ -34743,8 +33623,7 @@ }, "15530358": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Estriol bound and ligand-free structures of sterol 14alpha-demethylase.", "pub_date": "2004 Nov", @@ -34758,8 +33637,7 @@ }, "28743081": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PPE44 (Rv2770c) is involved in response to multiple stresses and promotes the macrophage expression of IL-12 p40 and IL-6 via the p38, ERK, and NF-\u03baB signaling axis.", "pub_date": "2017 Sep", @@ -34773,8 +33651,7 @@ }, "25124040": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biosynthesis and translocation of unsulfated acyltrehaloses in Mycobacterium tuberculosis.", "pub_date": "2014 Oct 3", @@ -34788,8 +33665,7 @@ }, "23867456": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Early secreted antigenic target of 6 kDa (ESAT-6) protein of Mycobacterium tuberculosis induces interleukin-8 (IL-8) expression in lung epithelial cells via protein kinase signaling and reactive oxygen species.", "pub_date": "2013 Aug 30", @@ -34803,8 +33679,7 @@ }, "24093492": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Lipoproteins of slow-growing Mycobacteria carry three fatty acids and are N-acylated by apolipoprotein N-acyltransferase BCG_2070c.", "pub_date": "2013 Oct 5", @@ -34818,8 +33693,7 @@ }, "14687575": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis ribose-5-phosphate isomerase has a known fold, but a novel active site.", "pub_date": "2004 Jan 16", @@ -34833,8 +33707,7 @@ }, "32495977": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Insight into Isoprenoid Biosynthesis by Functional Analysis of Isoprenyl Diphosphate Synthases from Mycobacterium vanbaalenii and Mycobacterium tuberculosis.", "pub_date": "2020 Oct 15", @@ -34848,8 +33721,7 @@ }, "23869560": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis EspB binds phospholipids and mediates EsxA-independent virulence.", "pub_date": "2013 Sep", @@ -34863,8 +33735,7 @@ }, "15703182": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The OtsAB pathway is essential for trehalose biosynthesis in Mycobacterium tuberculosis.", "pub_date": "2005 Apr 15", @@ -34878,8 +33749,7 @@ }, "27765619": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv0431 expressed in Mycobacterium smegmatis, a potentially mannosylated protein, mediated the immune evasion of RAW 264.7 macrophages.", "pub_date": "2016 Nov", @@ -34893,8 +33763,7 @@ }, "35365094": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "LysX2 is a Mycobacterium tuberculosis membrane protein with an extracytoplasmic MprF-like domain.", "pub_date": "2022 Apr 1", @@ -34908,8 +33777,7 @@ }, "23091471": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional characterization and evolution of the isotuberculosinol operon in Mycobacterium tuberculosis and related Mycobacteria.", "pub_date": "2012", @@ -34923,8 +33791,7 @@ }, "20234378": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Regulation of antigen presentation by Mycobacterium tuberculosis: a role for Toll-like receptors.", "pub_date": "2010 Apr", @@ -34938,8 +33805,7 @@ }, "24225902": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "VapC20 of Mycobacterium tuberculosis cleaves the sarcin-ricin loop of 23S rRNA.", "pub_date": "2013", @@ -34953,8 +33819,7 @@ }, "16093239": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure and functional analysis of lipoamide dehydrogenase from Mycobacterium tuberculosis.", "pub_date": "2005 Oct 7", @@ -34968,8 +33833,7 @@ }, "22479184": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Virulence regulator EspR of Mycobacterium tuberculosis is a nucleoid-associated protein.", "pub_date": "2012", @@ -34983,8 +33847,7 @@ }, "24723382": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Active site conformational changes upon reaction intermediate biotinyl-5'-AMP binding in biotin protein ligase from Mycobacterium tuberculosis.", "pub_date": "2014 Jul", @@ -34998,8 +33861,7 @@ }, "15135056": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cross talk between DevS sensor kinase homologue, Rv2027c, and DevR response regulator of Mycobacterium tuberculosis.", "pub_date": "2004 May 7", @@ -35013,8 +33875,7 @@ }, "30292819": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical and Structural Characterization of TesA, a Major Thioesterase Required for Outer-Envelope Lipid Biosynthesis in Mycobacterium tuberculosis.", "pub_date": "2018 Dec 7", @@ -35028,8 +33889,7 @@ }, "24586151": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis exploits asparagine to assimilate nitrogen and resist acid stress during infection.", "pub_date": "2014 Feb", @@ -35043,8 +33903,7 @@ }, "18722345": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis UsfX (Rv3287c) exhibits novel nucleotide binding and hydrolysis properties.", "pub_date": "2008 Oct 24", @@ -35058,8 +33917,7 @@ }, "12950920": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Requirement for kasB in Mycobacterium mycolic acid biosynthesis, cell wall impermeability and intracellular survival: implications for therapy.", "pub_date": "2003 Sep", @@ -35073,8 +33931,7 @@ }, "19130906": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interactions of the M. tuberculosis UsfX with the cognate sigma factor SigF and the anti-anti sigma factor RsfA.", "pub_date": "2009 Mar", @@ -35088,8 +33945,7 @@ }, "19121323": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PknB-mediated phosphorylation of a novel substrate, N-acetylglucosamine-1-phosphate uridyltransferase, modulates its acetyltransferase activity.", "pub_date": "2009 Feb 20", @@ -35103,8 +33959,7 @@ }, "37336124": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of a mycobacterial secretory protein Rv0398c and in silico prediction of its export pathway.", "pub_date": "2023 Sep 10", @@ -35118,8 +33973,7 @@ }, "15901723": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "NAD+-dependent DNA Ligase (Rv3014c) from Mycobacterium tuberculosis. Crystal structure of the adenylation domain and identification of novel inhibitors.", "pub_date": "2005 Aug 26", @@ -35133,8 +33987,7 @@ }, "16889979": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Purification and characterization of a functionally active Mycobacterium tuberculosis prephenate dehydrogenase.", "pub_date": "2006 Oct", @@ -35148,8 +34001,7 @@ }, "17157031": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of Mycobacterium tuberculosis WhiB1/Rv3219 as a protein disulfide reductase.", "pub_date": "2007 Apr", @@ -35163,8 +34015,7 @@ }, "22114320": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of NrnA homologs from Mycobacterium tuberculosis and Mycoplasma pneumoniae.", "pub_date": "2012 Jan", @@ -35178,8 +34029,7 @@ }, "20876537": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Noncognate Mycobacterium tuberculosis toxin-antitoxins can physically and functionally interact.", "pub_date": "2010 Dec 17", @@ -35193,8 +34043,7 @@ }, "16877713": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The product complex of M. tuberculosis malate synthase revisited.", "pub_date": "2006 Aug", @@ -35208,8 +34057,7 @@ }, "27698396": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The ubiquitin ligase TRIM27 functions as a host restriction factor antagonized by Mycobacterium tuberculosis PtpA during mycobacterial infection.", "pub_date": "2016 Oct 4", @@ -35223,8 +34071,7 @@ }, "16468986": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of the Mycobacterium tuberculosis proteasome and mechanism of inhibition by a peptidyl boronate.", "pub_date": "2006 Mar", @@ -35238,8 +34085,7 @@ }, "31160336": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Dual control of RegX3 transcriptional activity by SenX3 and PknB.", "pub_date": "2019 Jul 12", @@ -35253,8 +34099,7 @@ }, "16098710": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The 19-kDa antigen of Mycobacterium tuberculosis is a major adhesin that binds the mannose receptor of THP-1 monocytic cells and promotes phagocytosis of mycobacteria.", "pub_date": "2005 Sep", @@ -35268,8 +34113,7 @@ }, "28061949": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv0560c is not essential for growth in\u00a0vitro or in macrophages.", "pub_date": "2017 Jan", @@ -35283,8 +34127,7 @@ }, "21565198": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into the novel diadenosine 5',5\u2034-P\u00b9,P\u2074-tetraphosphate phosphorylase from Mycobacterium tuberculosis H37Rv.", "pub_date": "2011 Jul 1", @@ -35298,8 +34141,7 @@ }, "15158675": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning and expression of the trehalose-phosphate phosphatase of Mycobacterium tuberculosis: comparison to the enzyme from Mycobacterium smegmatis.", "pub_date": "2004 Jun 15", @@ -35313,8 +34155,7 @@ }, "19169353": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv3802c encodes a phospholipase/thioesterase and is inhibited by the antimycobacterial agent tetrahydrolipstatin.", "pub_date": "2009", @@ -35328,8 +34169,7 @@ }, "15882420": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A member of the cAMP receptor protein family of transcription regulators in Mycobacterium tuberculosis is required for virulence in mice and controls transcription of the rpfA gene coding for a resuscitation promoting factor.", "pub_date": "2005 Jun", @@ -35343,8 +34183,7 @@ }, "23923105": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of a putative aspartic proteinase domain of the Mycobacterium tuberculosis cell surface antigen PE_PGRS16.", "pub_date": "2013", @@ -35358,8 +34197,7 @@ }, "30366125": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PPE11 of Mycobacterium tuberculosis can alter host inflammatory response and trigger cell death.", "pub_date": "2019 Jan", @@ -35373,8 +34211,7 @@ }, "34371166": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Substrate specificity and conformational flexibility properties of the Mycobacterium tuberculosis \u03b2-oxidation trifunctional enzyme.", "pub_date": "2021 Sep", @@ -35388,8 +34225,7 @@ }, "17141764": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cyclosporin A binding to Mycobacterium tuberculosis peptidyl-prolyl cis-trans isomerase A--investigation by CD, FTIR and fluorescence spectroscopy.", "pub_date": "2006 Dec 22", @@ -35403,8 +34239,7 @@ }, "23485416": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures identify an atypical two-metal-ion mechanism for uridyltransfer in GlmU: its significance to sugar nucleotidyl transferases.", "pub_date": "2013 May 27", @@ -35418,8 +34253,7 @@ }, "18434308": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of F420-dependent glucose-6-phosphate dehydrogenase FGD1 involved in the activation of the anti-tuberculosis drug candidate PA-824 reveal the basis of coenzyme and substrate binding.", "pub_date": "2008 Jun 20", @@ -35433,8 +34267,7 @@ }, "26036301": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Surface hydrolysis of sphingomyelin by the outer membrane protein Rv0888 supports replication of Mycobacterium tuberculosis in macrophages.", "pub_date": "2015 Sep", @@ -35448,8 +34281,7 @@ }, "15192106": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis antigen 85A and 85C structures confirm binding orientation and conserved substrate specificity.", "pub_date": "2004 Aug 27", @@ -35463,8 +34295,7 @@ }, "33257730": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and functional characterization of M. tuberculosis sedoheptulose- 7-phosphate isomerase, a critical enzyme involved in lipopolysaccharide biosynthetic pathway.", "pub_date": "2020 Nov 30", @@ -35478,8 +34309,7 @@ }, "20558725": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The multifunctional PE_PGRS11 protein from Mycobacterium tuberculosis plays a role in regulating resistance to oxidative stress.", "pub_date": "2010 Oct 1", @@ -35493,8 +34323,7 @@ }, "12366842": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The functions of OmpATb, a pore-forming protein of Mycobacterium tuberculosis.", "pub_date": "2002 Oct", @@ -35508,8 +34337,7 @@ }, "17658950": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis nuoG is a virulence gene that inhibits apoptosis of infected host cells.", "pub_date": "2007 Jul", @@ -35523,8 +34351,7 @@ }, "17482646": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The structure of the regulatory domain of the adenylyl cyclase Rv1264 from Mycobacterium tuberculosis with bound oleic acid.", "pub_date": "2007 Jun 22", @@ -35538,8 +34365,7 @@ }, "23818233": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the N-terminal domain of EccA\u2081 ATPase from the ESX-1 secretion system of Mycobacterium tuberculosis.", "pub_date": "2014 Jan", @@ -35553,8 +34379,7 @@ }, "23284742": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis PE proteins Rv0285 and Rv1386 modulate innate immunity and mediate bacillary survival in macrophages.", "pub_date": "2012", @@ -35568,8 +34393,7 @@ }, "1904126": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Genetic analysis of superoxide dismutase, the 23 kilodalton antigen of Mycobacterium tuberculosis.", "pub_date": "1991 Feb", @@ -35583,8 +34407,7 @@ }, "12717031": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of a pantothenate synthetase from M. tuberculosis and its complexes with substrates and a reaction intermediate.", "pub_date": "2003 May", @@ -35598,8 +34421,7 @@ }, "21471225": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Conserved Pro-Glu (PE) and Pro-Pro-Glu (PPE) protein domains target LipY lipases of pathogenic mycobacteria to the cell surface via the ESX-5 pathway.", "pub_date": "2011 May 27", @@ -35613,8 +34435,7 @@ }, "22076471": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular dynamics of Mycobacterium tuberculosis KasA: implications for inhibitor and substrate binding and consequences for drug design.", "pub_date": "2011 Nov", @@ -35628,8 +34449,7 @@ }, "21244531": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Downregulation of katG expression is associated with isoniazid resistance in Mycobacterium tuberculosis.", "pub_date": "2011 Mar", @@ -35643,8 +34463,7 @@ }, "23762287": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv3406 is a type II alkyl sulfatase capable of sulfate scavenging.", "pub_date": "2013", @@ -35658,8 +34477,7 @@ }, "20736081": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Evidence for the cytotoxic effects of Mycobacterium tuberculosis phospholipase C towards macrophages.", "pub_date": "2010 Dec", @@ -35673,8 +34491,7 @@ }, "12502719": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The mmaA2 gene of Mycobacterium tuberculosis encodes the distal cyclopropane synthase of the alpha-mycolic acid.", "pub_date": "2003 Mar 7", @@ -35688,8 +34505,7 @@ }, "24039915": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cholesterol oxidase is indispensable in the pathogenesis of Mycobacterium tuberculosis.", "pub_date": "2013", @@ -35703,8 +34519,7 @@ }, "18621388": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural, biochemical, and in vivo investigations of the threonine synthase from Mycobacterium tuberculosis.", "pub_date": "2008 Sep 5", @@ -35718,8 +34533,7 @@ }, "35898907": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Deficiency of GntR Family Regulator MSMEG_5174 Promotes Mycobacterium smegmatis Resistance to Aminoglycosides via Manipulating Purine Metabolism.", "pub_date": "2022", @@ -35733,8 +34547,7 @@ }, "26158346": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning and characterization of a novel PE_PGRS60 protein (Rv3652) of Mycobacterium tuberculosis H37 Rv exhibit fibronectin-binding property.", "pub_date": "2016 Jul", @@ -35748,8 +34561,7 @@ }, "37879252": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Secretory protein Rv1987, a 'probable chitinase' from Mycobacterium tuberculosis is a novel chitin and cellulose binding protein lacking enzymatic function.", "pub_date": "2023 Dec 3", @@ -35763,8 +34575,7 @@ }, "20851704": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Kinetic, thermodynamic, and structural insight into the mechanism of phosphopantetheine adenylyltransferase from Mycobacterium tuberculosis.", "pub_date": "2010 Nov 26", @@ -35778,8 +34589,7 @@ }, "23843969": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of residues involved in substrate specificity and cytotoxicity of two closely related cutinases from Mycobacterium tuberculosis.", "pub_date": "2013", @@ -35793,8 +34603,7 @@ }, "19225166": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cutinase-like proteins of Mycobacterium tuberculosis: characterization of their variable enzymatic functions and active site identification.", "pub_date": "2009 Jun", @@ -35808,8 +34617,7 @@ }, "20416504": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Activity-based metabolomic profiling of enzymatic function: identification of Rv1248c as a mycobacterial 2-hydroxy-3-oxoadipate synthase.", "pub_date": "2010 Apr 23", @@ -35823,8 +34631,7 @@ }, "19182784": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mechanistic and functional insights into fatty acid activation in Mycobacterium tuberculosis.", "pub_date": "2009 Mar", @@ -35838,8 +34645,7 @@ }, "25379378": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PE25/PPE41 protein complex induces necrosis in macrophages: Role in virulence and disease reactivation?", "pub_date": "2014", @@ -35853,8 +34659,7 @@ }, "18627460": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biosynthesis of mycobacterial arabinogalactan: identification of a novel alpha(1-->3) arabinofuranosyltransferase.", "pub_date": "2008 Sep", @@ -35868,8 +34673,7 @@ }, "15843027": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of Mycobacteria tuberculosis and Klebsiella pneumoniae UDP-galactopyranose mutase in the oxidised state and Klebsiella pneumoniae UDP-galactopyranose mutase in the (active) reduced state.", "pub_date": "2005 May 13", @@ -35898,8 +34702,7 @@ }, "10491108": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Cloning, over-expression and biochemical characterization of the single-stranded DNA binding protein from Mycobacterium tuberculosis.", "pub_date": "1999 Sep", @@ -35913,8 +34716,7 @@ }, "24155985": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The ESX-3 secretion system is necessary for iron and zinc homeostasis in Mycobacterium tuberculosis.", "pub_date": "2013", @@ -35928,8 +34730,7 @@ }, "27569900": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Enolase of Mycobacterium tuberculosis is a surface exposed plasminogen binding protein.", "pub_date": "2017 Jan", @@ -35943,8 +34744,7 @@ }, "19638631": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Key residues in Mycobacterium tuberculosis protein kinase G play a role in regulating kinase activity and survival in the host.", "pub_date": "2009 Oct 2", @@ -35958,8 +34758,7 @@ }, "18353359": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of the response regulator DosR from Mycobacterium tuberculosis suggest a helix rearrangement mechanism for phosphorylation activation.", "pub_date": "2008 Apr 18", @@ -35973,8 +34772,7 @@ }, "29884774": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The domain architecture of PtkA, the first tyrosine kinase from Mycobacterium tuberculosis, differs from the conventional kinase architecture.", "pub_date": "2018 Jul 27", @@ -35988,8 +34786,7 @@ }, "18231589": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The enduring hypoxic response of Mycobacterium tuberculosis.", "pub_date": "2008 Jan 30", @@ -36003,8 +34800,7 @@ }, "34362927": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Large-scale computational discovery and analysis of virus-derived microbial nanocompartments.", "pub_date": "2021 Aug 6", @@ -36018,8 +34814,7 @@ }, "33412160": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Distinct functional properties of secretory l-asparaginase Rv1538c involved in phagosomal survival of Mycobacterium tuberculosis.", "pub_date": "2021 Mar", @@ -36033,8 +34828,7 @@ }, "20520732": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Understanding the role of PknJ in Mycobacterium tuberculosis: biochemical characterization and identification of novel substrate pyruvate kinase A.", "pub_date": "2010 May 24", @@ -36048,8 +34842,7 @@ }, "21219854": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of DNA polymerase III \u03b2 sliding clamp from Mycobacterium tuberculosis.", "pub_date": "2011 Feb 11", @@ -36063,8 +34856,7 @@ }, "18175374": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis serine/threonine kinase PknL phosphorylates Rv2175c: mass spectrometric profiling of the activation loop phosphorylation sites and their role in the recruitment of Rv2175c.", "pub_date": "2008 Feb", @@ -36078,8 +34870,7 @@ }, "30316633": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Discovery of heterocyclic replacements for the coumarin core of anti-tubercular FadD32 inhibitors.", "pub_date": "2018 Dec 1", @@ -36093,8 +34884,7 @@ }, "21029479": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rhomboid homologs in mycobacteria: insights from phylogeny and genomic analysis.", "pub_date": "2010 Oct 29", @@ -36108,8 +34898,7 @@ }, "15654876": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of the secreted chorismate mutase from the pathogen Mycobacterium tuberculosis.", "pub_date": "2005 Jan", @@ -36123,8 +34912,7 @@ }, "17298391": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The ESAT6 protein of Mycobacterium tuberculosis induces apoptosis of macrophages by activating caspase expression.", "pub_date": "2007 Jun", @@ -36138,8 +34926,7 @@ }, "8294019": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A PCR method for the sequence analysis of the gyrA, polA and rnhA gene segments from mycobacteria.", "pub_date": "1993 Dec 22", @@ -36153,8 +34940,7 @@ }, "12662932": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis thymidylate kinase: structural studies of intermediates along the reaction pathway.", "pub_date": "2003 Apr 11", @@ -36168,8 +34954,7 @@ }, "26276393": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis RecG protein but not RuvAB or RecA protein is efficient at remodeling the stalled replication forks: implications for multiple mechanisms of replication restart in mycobacteria.", "pub_date": "2015 Oct 2", @@ -36183,8 +34968,7 @@ }, "18790692": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Product chain-length determination mechanism of Z,E-farnesyl diphosphate synthase.", "pub_date": "2008 Dec 5", @@ -36198,8 +34982,7 @@ }, "19733180": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure-function analysis of the acyl carrier protein synthase (AcpS) from Mycobacterium tuberculosis.", "pub_date": "2009 Nov 6", @@ -36213,8 +34996,7 @@ }, "30265958": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Pyrrolidine nucleoside bisphosphonates as antituberculosis agents targeting hypoxanthine-guanine phosphoribosyltransferase.", "pub_date": "2018 Nov 5", @@ -36228,8 +35010,7 @@ }, "21410778": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression of the ompATb operon accelerates ammonia secretion and adaptation of Mycobacterium tuberculosis to acidic environments.", "pub_date": "2011 May", @@ -36243,8 +35024,7 @@ }, "26083721": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Correction: Identification of Rv3852 as an Agrimophol-Binding Protein in Mycobacterium tuberculosis.", "pub_date": "2015", @@ -36258,8 +35038,7 @@ }, "20558127": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Fellutamide B is a potent inhibitor of the Mycobacterium tuberculosis proteasome.", "pub_date": "2010 Sep 15", @@ -36273,8 +35052,7 @@ }, "20843794": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional redundancy of steroid C26-monooxygenase activity in Mycobacterium tuberculosis revealed by biochemical and genetic analyses.", "pub_date": "2010 Nov 19", @@ -36288,8 +35066,7 @@ }, "29502025": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Potent dialkyl substrate-product analogue inhibitors and inactivators of \u03b1-methylacyl-coenzyme A racemase from Mycobacterium tuberculosis by rational design.", "pub_date": "2018 Apr", @@ -36303,8 +35080,7 @@ }, "15236969": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the TetR/CamR family repressor Mycobacterium tuberculosis EthR implicated in ethionamide resistance.", "pub_date": "2004 Jul 23", @@ -36318,8 +35094,7 @@ }, "21568871": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a bifunctional \u03b2-lactamase/ribonuclease and its interaction with a chaperone-like protein in the pathogen Mycobacterium tuberculosis H37Rv.", "pub_date": "2011 Mar", @@ -36333,8 +35108,7 @@ }, "29317718": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Protein tyrosine kinase, PtkA, is required for Mycobacterium tuberculosis growth in macrophages.", "pub_date": "2018 Jan 9", @@ -36348,8 +35122,7 @@ }, "25613812": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Increasing the structural coverage of tuberculosis drug targets.", "pub_date": "2015 Mar", @@ -36363,8 +35136,7 @@ }, "25450593": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the VapBC-15 complex from Mycobacterium tuberculosis reveals a two-metal ion dependent PIN-domain ribonuclease and a variable mode of toxin-antitoxin assembly.", "pub_date": "2014 Dec", @@ -36378,8 +35150,7 @@ }, "30475863": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PPE17 (Rv1168c) protein of Mycobacterium tuberculosis detects individuals with latent TB infection.", "pub_date": "2018", @@ -36393,8 +35164,7 @@ }, "20545858": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis CYP125A1, a steroid C27 monooxygenase that detoxifies intracellularly generated cholest-4-en-3-one.", "pub_date": "2010 Aug", @@ -36408,8 +35178,7 @@ }, "24809459": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phosphorylation of KasB regulates virulence and acid-fastness in Mycobacterium tuberculosis.", "pub_date": "2014 May", @@ -36423,8 +35192,7 @@ }, "23548911": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis RNA polymerase-binding protein A (RbpA) and its interactions with sigma factors.", "pub_date": "2013 May 17", @@ -36438,8 +35206,7 @@ }, "18426397": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PPE protein (Rv3425) from DNA segment RD11 of Mycobacterium tuberculosis: a novel immunodominant antigen of Mycobacterium tuberculosis induces humoral and cellular immune responses in mice.", "pub_date": "2008 Apr", @@ -36453,8 +35220,7 @@ }, "37385399": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis H37Rv enolase (Rv1023)- expression, characterization and effect of host dependent modifications on protein functionality.", "pub_date": "2023 Nov", @@ -36468,8 +35234,7 @@ }, "18474358": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis virulence is mediated by PtpA dephosphorylation of human vacuolar protein sorting 33B.", "pub_date": "2008 May 15", @@ -36483,8 +35248,7 @@ }, "22015173": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis H37Rv sigC is expressed from two promoters but is not auto-regulatory.", "pub_date": "2012 Jan", @@ -36498,8 +35262,7 @@ }, "19843229": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Polyphosphate kinase 2: a modulator of nucleoside diphosphate kinase activity in mycobacteria.", "pub_date": "2009 Dec", @@ -36513,8 +35276,7 @@ }, "16326705": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The substrate-induced conformational change of Mycobacterium tuberculosis mycothiol synthase.", "pub_date": "2006 Feb 3", @@ -36528,8 +35290,7 @@ }, "25551456": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Subfamily-specific adaptations in the structures of two penicillin-binding proteins from Mycobacterium tuberculosis.", "pub_date": "2014", @@ -36543,8 +35304,7 @@ }, "19154333": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Genome-wide regulon and crystal structure of BlaI (Rv1846c) from Mycobacterium tuberculosis.", "pub_date": "2009 Mar", @@ -36558,8 +35318,7 @@ }, "14998516": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The knockout of the lprG-Rv1410 operon produces strong attenuation of Mycobacterium tuberculosis.", "pub_date": "2004 Feb", @@ -36573,8 +35332,7 @@ }, "9278431": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and efficient export of enzymatically active Mycobacterium tuberculosis glutamine synthetase in Mycobacterium smegmatis and evidence that the information for export is contained within the protein.", "pub_date": "1997 Sep 5", @@ -36588,8 +35346,7 @@ }, "24311791": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv2179c protein establishes a new exoribonuclease family with broad phylogenetic distribution.", "pub_date": "2014 Jan 24", @@ -36603,8 +35360,7 @@ }, "35314194": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis encodes a YhhN family membrane protein with lysoplasmalogenase activity that protects against toxic host lysolipids.", "pub_date": "2022 May", @@ -36618,8 +35374,7 @@ }, "16595677": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a novel arabinofuranosyltransferase (AftA) involved in cell wall arabinan biosynthesis in Mycobacterium tuberculosis.", "pub_date": "2006 Jun 9", @@ -36633,8 +35388,7 @@ }, "19759536": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inhibitors selective for mycobacterial versus human proteasomes.", "pub_date": "2009 Oct 1", @@ -36648,8 +35402,7 @@ }, "22558408": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a novel ArsR-like regulator encoded by Rv2034 in Mycobacterium tuberculosis.", "pub_date": "2012", @@ -36663,8 +35416,7 @@ }, "27349953": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv1152 is a Novel GntR Family Transcriptional Regulator Involved in Intrinsic Vancomycin Resistance and is a Potential Vancomycin Adjuvant Target.", "pub_date": "2016 Jun 28", @@ -36678,8 +35430,7 @@ }, "22415304": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Rv0577, a novel TLR2 agonist, induces maturation of dendritic cells and drives Th1 immune response.", "pub_date": "2012 Jun", @@ -36693,8 +35444,7 @@ }, "32569876": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Recombinant Rv3261 protein of Mycobacterium tuberculosis induces apoptosis through a mitochondrion-dependent pathway in macrophages and inhibits intracellular bacterial growth.", "pub_date": "2020 Aug", @@ -36708,8 +35458,7 @@ }, "27364382": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Rv2074 is a novel F420 H2 -dependent biliverdin reductase in Mycobacterium tuberculosis.", "pub_date": "2016 Sep", @@ -36723,8 +35472,7 @@ }, "23743602": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional analysis of the EspR binding sites upstream of espR in Mycobacterium tuberculosis.", "pub_date": "2013 Nov", @@ -36738,8 +35486,7 @@ }, "12851411": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of the required acyltransferase step in the biosynthesis of the phosphatidylinositol mannosides of mycobacterium species.", "pub_date": "2003 Sep 19", @@ -36753,8 +35500,7 @@ }, "19761766": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A distinct structural region of the prokaryotic ubiquitin-like protein (Pup) is recognized by the N-terminal domain of the proteasomal ATPase Mpa.", "pub_date": "2009 Oct 6", @@ -36768,8 +35514,7 @@ }, "11756461": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structures of mycolic acid cyclopropane synthases from Mycobacterium tuberculosis.", "pub_date": "2002 Mar 29", @@ -36783,8 +35528,7 @@ }, "10645441": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of an immunogenic histone-like protein (HLPMt) of Mycobacterium tuberculosis.", "pub_date": "1998", @@ -36798,8 +35542,7 @@ }, "31380295": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Inhibitory Effect of GlmU Acetyltransferase Inhibitor TPSA on Mycobacterium tuberculosis May Be Affected Due to Its Methylation by Methyltransferase Rv0560c.", "pub_date": "2019", @@ -36813,8 +35556,7 @@ }, "16879801": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis transporter MmpL7 is a potential substrate for kinase PknD.", "pub_date": "2006 Sep 15", @@ -36828,8 +35570,7 @@ }, "19889539": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Fragment-based discovery of selective inhibitors of the Mycobacterium tuberculosis protein tyrosine phosphatase PtpA.", "pub_date": "2009 Dec 15", @@ -36843,8 +35584,7 @@ }, "22637481": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mechanistic insights into the retaining glucosyl-3-phosphoglycerate synthase from mycobacteria.", "pub_date": "2012 Jul 13", @@ -36858,8 +35598,7 @@ }, "16630724": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Purification and characterization of Mycobacterium tuberculosis 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase, MshB, a mycothiol biosynthetic enzyme.", "pub_date": "2006 Jun", @@ -36873,8 +35612,7 @@ }, "25467937": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phenotypic characterization of a novel double knockout PknI/DacB2 from Mycobacterium tuberculosis.", "pub_date": "2015 Jan", @@ -36888,8 +35626,7 @@ }, "9092547": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "MMAS-1, the branch point between cis- and trans-cyclopropane-containing oxygenated mycolates in Mycobacterium tuberculosis.", "pub_date": "1997 Apr 11", @@ -36903,8 +35640,7 @@ }, "25467124": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The polyketide synthase Pks13 catalyzes a novel mechanism of lipid transfer in mycobacteria.", "pub_date": "2014 Dec 18", @@ -36918,8 +35654,7 @@ }, "15985609": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis serine/threonine kinases PknA and PknB: substrate identification and regulation of cell shape.", "pub_date": "2005 Jul 15", @@ -36933,8 +35668,7 @@ }, "25896765": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Autophagy regulation revealed by SapM-induced block of autophagosome-lysosome fusion via binding RAB7.", "pub_date": "2015 May 29", @@ -36948,8 +35682,7 @@ }, "28416386": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural analysis of the interaction between spiroisoxazoline SMARt-420 and the Mycobacterium tuberculosis repressor EthR2.", "pub_date": "2017 May 27", @@ -36963,8 +35696,7 @@ }, "21672512": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A tetrameric structure is not essential for activity in dihydrodipicolinate synthase (DHDPS) from Mycobacterium tuberculosis.", "pub_date": "2011 Aug 15", @@ -36978,8 +35710,7 @@ }, "20189102": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Synthesis of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate and kinetic studies of Mycobacterium tuberculosis IspF.", "pub_date": "2010 Feb 26", @@ -36993,8 +35724,7 @@ }, "17174327": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "X-ray crystal structure of Mycobacterium tuberculosis beta-ketoacyl acyl carrier protein synthase II (mtKasB).", "pub_date": "2007 Feb 16", @@ -37008,8 +35738,7 @@ }, "21094166": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and functional conservation of Mycobacterium tuberculosis GroEL paralogs suggests that GroEL1 Is a chaperonin.", "pub_date": "2011 Jan 21", @@ -37023,8 +35752,7 @@ }, "10882107": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel mycolic acid cyclopropane synthetase is required for cording, persistence, and virulence of Mycobacterium tuberculosis.", "pub_date": "2000 Apr", @@ -37038,8 +35766,7 @@ }, "18613748": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel intermolecular iterative mechanism for biosynthesis of mycoketide catalyzed by a bimodular polyketide synthase.", "pub_date": "2008 Jul 8", @@ -37053,8 +35780,7 @@ }, "18236087": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular modelling and comparative structural account of aspartyl beta-semialdehyde dehydrogenase of Mycobacterium tuberculosis (H37Rv).", "pub_date": "2008 Apr", @@ -37068,8 +35794,7 @@ }, "15753077": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "pheA (Rv3838c) of Mycobacterium tuberculosis encodes an allosterically regulated monofunctional prephenate dehydratase that requires both catalytic and regulatory domains for optimum activity.", "pub_date": "2005 May 27", @@ -37083,8 +35808,7 @@ }, "18276158": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular cloning and biochemical characterization of a serine threonine protein kinase, PknL, from Mycobacterium tuberculosis.", "pub_date": "2008 Apr", @@ -37098,8 +35822,7 @@ }, "9119030": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A serine/threonine protein kinase from Mycobacterium tuberculosis.", "pub_date": "1997 Mar 1", @@ -37113,8 +35836,7 @@ }, "12387860": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Specificity of substrate recognition by type II dehydroquinases as revealed by binding of polyanions.", "pub_date": "2002 Oct 23", @@ -37128,8 +35850,7 @@ }, "12237220": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression, purification and spectroscopic characterization of the cytochrome P450 CYP121 from Mycobacterium tuberculosis.", "pub_date": "2002 Sep 20", @@ -37143,8 +35864,7 @@ }, "28724903": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Co-expression network analysis of toxin-antitoxin loci in Mycobacterium tuberculosis reveals key modulators of cellular stress.", "pub_date": "2017 Jul 19", @@ -37158,8 +35878,7 @@ }, "19467342": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Novel recombinant RD2- and RD11-encoded Mycobacterium tuberculosis antigens are potential candidates for diagnosis of tuberculosis infections in BCG-vaccinated individuals.", "pub_date": "2009 Sep", @@ -37173,8 +35892,7 @@ }, "18342411": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Intranasal delivery of DNA encoding antigens of Mycobacterium tuberculosis by non-pathogenic invasive Escherichia coli.", "pub_date": "2008 Apr 7", @@ -37188,8 +35906,7 @@ }, "31427817": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis releases an antacid that remodels phagosomes.", "pub_date": "2019 Sep", @@ -37203,8 +35920,7 @@ }, "21920479": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Bacterial proteins with cleaved or uncleaved signal peptides of the general secretory pathway.", "pub_date": "2011 Dec 21", @@ -37218,8 +35934,7 @@ }, "21637345": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A Sir2-like protein participates in mycobacterial NHEJ.", "pub_date": "2011", @@ -37233,8 +35948,7 @@ }, "14559907": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Unique mechanism of action of the thiourea drug isoxyl on Mycobacterium tuberculosis.", "pub_date": "2003 Dec 26", @@ -37248,8 +35962,7 @@ }, "25390359": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Impact of protein domains on PE_PGRS30 polar localization in Mycobacteria.", "pub_date": "2014", @@ -37263,8 +35976,7 @@ }, "14632649": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Human T-cell responses to the RD1-encoded protein TB27.4 (Rv3878) from Mycobacterium tuberculosis.", "pub_date": "2003 Dec", @@ -37278,8 +35990,7 @@ }, "15886207": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure and mechanism of the alkyl hydroperoxidase AhpC, a key element of the Mycobacterium tuberculosis defense system against oxidative stress.", "pub_date": "2005 Jul 8", @@ -37293,8 +36004,7 @@ }, "23150662": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis ESAT-6 exhibits a unique membrane-interacting activity that is not found in its ortholog from non-pathogenic Mycobacterium smegmatis.", "pub_date": "2012 Dec 28", @@ -37308,8 +36018,7 @@ }, "10531370": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The pimB gene of Mycobacterium tuberculosis encodes a mannosyltransferase involved in lipoarabinomannan biosynthesis.", "pub_date": "1999 Oct 29", @@ -37324,7 +36033,6 @@ "30416491": { "groups": [ "mtuberculosis", - "escherichia_coli", "sgtpb" ], "title": "Identification of Enolase as the Target of 2-Aminothiazoles in Mycobacterium tuberculosis.", @@ -37339,8 +36047,7 @@ }, "10766746": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The AhpC and AhpD antioxidant defense system of Mycobacterium tuberculosis.", "pub_date": "2000 Jun 23", @@ -37354,8 +36061,7 @@ }, "20338852": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mapping conformational transitions in cyclic AMP receptor protein: crystal structure and normal-mode analysis of Mycobacterium tuberculosis apo-cAMP receptor protein.", "pub_date": "2010 Jan 20", @@ -37369,8 +36075,7 @@ }, "15258569": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification, function and structure of the mycobacterial sulfotransferase that initiates sulfolipid-1 biosynthesis.", "pub_date": "2004 Aug", @@ -37384,8 +36089,7 @@ }, "25743628": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "New potential eukaryotic substrates of the mycobacterial protein tyrosine phosphatase PtpA: hints of a bacterial modulation of macrophage bioenergetics state.", "pub_date": "2015 Mar 6", @@ -37399,8 +36103,7 @@ }, "38012984": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Increased expression of Mycobacterium tuberculosis Rv3737 gene associated with low-level amikacin resistance.", "pub_date": "2024 Mar", @@ -37414,8 +36117,7 @@ }, "18430736": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular features governing the stability and specificity of functional complex formation by Mycobacterium tuberculosis CFP-10/ESAT-6 family proteins.", "pub_date": "2008 Jun 20", @@ -37429,8 +36131,7 @@ }, "25012658": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Oleoyl coenzyme A regulates interaction of transcriptional regulator RaaS (Rv1219c) with DNA in mycobacteria.", "pub_date": "2014 Sep 5", @@ -37444,8 +36145,7 @@ }, "12427759": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "In vivo interaction between the polyprenol phosphate mannose synthase Ppm1 and the integral membrane protein Ppm2 from Mycobacterium smegmatis revealed by a bacterial two-hybrid system.", "pub_date": "2003 Jan 24", @@ -37459,8 +36159,7 @@ }, "23284869": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The ESX-5 associated eccB-EccC locus is essential for Mycobacterium tuberculosis viability.", "pub_date": "2012", @@ -37474,8 +36173,7 @@ }, "16026786": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A novel two-component system found in Mycobacterium tuberculosis.", "pub_date": "2005 Aug 1", @@ -37489,8 +36187,7 @@ }, "15037612": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Adenylylation and catalytic properties of Mycobacterium tuberculosis glutamine synthetase expressed in Escherichia coli versus mycobacteria.", "pub_date": "2004 May 21", @@ -37504,8 +36201,7 @@ }, "21187903": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis eis regulates autophagy, inflammation, and cell death through redox-dependent signaling.", "pub_date": "2010 Dec 16", @@ -37519,8 +36215,7 @@ }, "26978522": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE_PGRS33 Contributes to Mycobacterium tuberculosis Entry in Macrophages through Interaction with TLR2.", "pub_date": "2016", @@ -37534,8 +36229,7 @@ }, "26092385": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Infection of A549 human type II epithelial cells with Mycobacterium tuberculosis induces changes in mitochondrial morphology, distribution and mass that are dependent on the early secreted antigen, ESAT-6.", "pub_date": "2015 Oct", @@ -37549,8 +36243,7 @@ }, "15876368": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Regulation by oligomerization in a mycobacterial folate biosynthetic enzyme.", "pub_date": "2005 May 27", @@ -37564,8 +36257,7 @@ }, "16374842": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of a putative pyridoxine 5'-phosphate oxidase (Rv2607) from Mycobacterium tuberculosis.", "pub_date": "2006 Mar 15", @@ -37579,8 +36271,7 @@ }, "20702407": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Regulation of response regulator autophosphorylation through interdomain contacts.", "pub_date": "2010 Oct 15", @@ -37594,8 +36285,7 @@ }, "21622570": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Forkhead-associated (FHA) domain containing ABC transporter Rv1747 is positively regulated by Ser/Thr phosphorylation in Mycobacterium tuberculosis.", "pub_date": "2011 Jul 22", @@ -37609,8 +36299,7 @@ }, "21134638": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and functional analysis of phosphothreonine-dependent FHA domain interactions.", "pub_date": "2010 Dec 8", @@ -37624,8 +36313,7 @@ }, "20686708": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Interaction and modulation of two antagonistic cell wall enzymes of mycobacteria.", "pub_date": "2010 Jul 29", @@ -37639,8 +36327,7 @@ }, "32157138": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Long-range replica exchange molecular dynamics guided drug repurposing against tyrosine kinase PtkA of Mycobacterium tuberculosis.", "pub_date": "2020 Mar 10", @@ -37654,8 +36341,7 @@ }, "16023671": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Domain structure of a NHEJ DNA repair ligase from Mycobacterium tuberculosis.", "pub_date": "2005 Aug 19", @@ -37669,8 +36355,7 @@ }, "19854148": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A continuous assay for alpha-methylacyl-coenzyme A racemase using circular dichroism.", "pub_date": "2010 Mar 1", @@ -37684,8 +36369,7 @@ }, "20454815": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular modeling studies of Fatty acyl-CoA synthetase (FadD13) from Mycobacterium tuberculosis--a potential target for the development of antitubercular drugs.", "pub_date": "2011 Feb", @@ -37699,8 +36383,7 @@ }, "17143269": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator.", "pub_date": "2007 Jan", @@ -37714,8 +36397,7 @@ }, "15967413": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Conserved autophosphorylation pattern in activation loops and juxtamembrane regions of Mycobacterium tuberculosis Ser/Thr protein kinases.", "pub_date": "2005 Aug 5", @@ -37729,8 +36411,7 @@ }, "38615303": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "C-terminal region of Rv1039c (PPE15) protein of Mycobacterium tuberculosis targets host mitochondria to induce macrophage apoptosis.", "pub_date": "2024 Oct", @@ -37744,8 +36425,7 @@ }, "38386260": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and functional characterization of mycobacterial PhoH2 and identification of potential inhibitor of its enzymatic activity.", "pub_date": "2024 Jun", @@ -37759,8 +36439,7 @@ }, "16817899": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "EmbR, a regulatory protein with ATPase activity, is a substrate of multiple serine/threonine kinases and phosphatase in Mycobacterium tuberculosis.", "pub_date": "2006 Jun", @@ -37774,8 +36453,7 @@ }, "12906837": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Resuscitation factors from mycobacteria: homologs of Micrococcus luteus proteins.", "pub_date": "2003", @@ -37789,8 +36467,7 @@ }, "37591829": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "MenT nucleotidyltransferase toxins extend tRNA acceptor stems and can be inhibited by asymmetrical antitoxin binding.", "pub_date": "2023 Aug 17", @@ -37804,8 +36481,7 @@ }, "14756778": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Individual RD1-region genes are required for export of ESAT-6/CFP-10 and for virulence of Mycobacterium tuberculosis.", "pub_date": "2004 Jan", @@ -37819,8 +36495,7 @@ }, "18727669": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A comparative biochemical and structural analysis of the intracellular chorismate mutase (Rv0948c) from Mycobacterium tuberculosis H(37)R(v) and the secreted chorismate mutase (y2828) from Yersinia pestis.", "pub_date": "2008 Oct", @@ -37834,8 +36509,7 @@ }, "7822223": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Isolation of a 43 kDa protein from Mycobacterium tuberculosis H37Rv and its identification as a pyridine nucleotide transhydrogenase.", "pub_date": "1994 Dec", @@ -37849,8 +36523,7 @@ }, "28164792": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization and function of Mycobacterium tuberculosis H37Rv Lipase Rv1076 (LipU).", "pub_date": "2017 Mar", @@ -37864,8 +36537,7 @@ }, "20929460": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis ORF Rv0654 encodes a carotenoid oxygenase mediating central and excentric cleavage of conventional and aromatic carotenoids.", "pub_date": "2010 Nov", @@ -37879,8 +36551,7 @@ }, "17302817": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular function of WhiB4/Rv3681c of Mycobacterium tuberculosis H37Rv: a [4Fe-4S] cluster co-ordinating protein disulphide reductase.", "pub_date": "2007 Mar", @@ -37894,8 +36565,7 @@ }, "20630871": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Convergence of Ser/Thr and two-component signaling to coordinate expression of the dormancy regulon in Mycobacterium tuberculosis.", "pub_date": "2010 Sep 17", @@ -37909,8 +36579,7 @@ }, "16246368": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structures of Mycobacterium tuberculosis DosR and DosR-DNA complex involved in gene activation during adaptation to hypoxic latency.", "pub_date": "2005 Dec 2", @@ -37924,8 +36593,7 @@ }, "31315931": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The active site of the Mycobacterium tuberculosis branched-chain amino acid biosynthesis enzyme dihydroxyacid dehydratase contains a 2Fe-2S cluster.", "pub_date": "2019 Aug 30", @@ -37939,8 +36607,7 @@ }, "25356793": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis lipoprotein LprG binds lipoarabinomannan and determines its cell envelope localization to control phagolysosomal fusion.", "pub_date": "2014 Oct", @@ -37954,8 +36621,7 @@ }, "30784877": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A fragment-based approach towards the discovery of N-substituted tropinones as inhibitors of Mycobacterium tuberculosis transcriptional regulator EthR2.", "pub_date": "2019 Apr 1", @@ -37969,8 +36635,7 @@ }, "29494752": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural characterization of the intrinsically disordered domain of Mycobacterium tuberculosis protein tyrosine kinase A.", "pub_date": "2018 Apr", @@ -37984,8 +36649,7 @@ }, "7934937": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Molecular basis of streptomycin resistance in Mycobacterium tuberculosis: alterations of the ribosomal protein S12 gene and point mutations within a functional 16S ribosomal RNA pseudoknot.", "pub_date": "1993 Sep", @@ -37999,8 +36663,7 @@ }, "21465667": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inhibition of Mycobacterium tuberculosis methionine aminopeptidases by bengamide derivatives.", "pub_date": "2011 Jun 6", @@ -38014,8 +36677,7 @@ }, "15207493": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Gene expression profile of Mycobacterium tuberculosis in a non-replicating state.", "pub_date": "2004", @@ -38029,8 +36691,7 @@ }, "22050772": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE_PGRS30 is required for the full virulence of Mycobacterium tuberculosis.", "pub_date": "2012 Mar", @@ -38044,8 +36705,7 @@ }, "18186793": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The resuscitation-promoting factors of Mycobacterium tuberculosis are required for virulence and resuscitation from dormancy but are collectively dispensable for growth in vitro.", "pub_date": "2008 Feb", @@ -38059,8 +36719,7 @@ }, "38408543": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis protein PPE15 (Rv1039c) possesses eukaryote-like SH3 domain that interferes with NADPH Oxidase assembly and Reactive Oxygen Species production.", "pub_date": "2024 Apr", @@ -38074,8 +36733,7 @@ }, "16884737": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional and structural characterization of a thiol peroxidase from Mycobacterium tuberculosis.", "pub_date": "2006 Sep 1", @@ -38089,8 +36747,7 @@ }, "38501584": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "HadBD dehydratase from Mycobacterium tuberculosis fatty acid synthase type II: A singular structure for a unique function.", "pub_date": "2024 Apr", @@ -38104,8 +36761,7 @@ }, "12182836": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression, purification, and biochemical characterization of Mycobacterium tuberculosis aspartate decarboxylase, PanD.", "pub_date": "2002 Aug", @@ -38119,8 +36775,7 @@ }, "11722747": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis IdeR is a dual functional regulator that controls transcription of genes involved in iron acquisition, iron storage and survival in macrophages.", "pub_date": "2001 Nov", @@ -38134,8 +36789,7 @@ }, "11401695": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Regulation of catalase-peroxidase (KatG) expression, isoniazid sensitivity and virulence by furA of Mycobacterium tuberculosis.", "pub_date": "2001 May", @@ -38149,8 +36803,7 @@ }, "27017992": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Recombinant preparation and functional studies of EspI ATP binding domain from Mycobacterium tuberculosis.", "pub_date": "2016 Jul", @@ -38164,8 +36817,7 @@ }, "18493582": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Kinetics and ligand-binding preferences of Mycobacterium tuberculosis thymidylate synthases, ThyA and ThyX.", "pub_date": "2008 May 21", @@ -38179,8 +36831,7 @@ }, "31886928": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into phosphopantetheinyl hydrolase PptH from Mycobacterium tuberculosis.", "pub_date": "2020 Mar", @@ -38194,8 +36845,7 @@ }, "29709002": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "B cells response directed against Cut4 and CFP21 lipolytic enzymes in active and latent tuberculosis infections.", "pub_date": "2018", @@ -38209,8 +36859,7 @@ }, "26318856": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PE25/PPE41 protein complex induces activation and maturation of dendritic cells and drives Th2-biased immune responses.", "pub_date": "2016 Apr", @@ -38224,8 +36873,7 @@ }, "10564470": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a virulence gene cluster of Mycobacterium tuberculosis by signature-tagged transposon mutagenesis.", "pub_date": "1999 Oct", @@ -38239,8 +36887,7 @@ }, "15695811": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of Rv1347c, a putative antibiotic resistance protein from Mycobacterium tuberculosis, reveals a GCN5-related fold and suggests an alternative function in siderophore biosynthesis.", "pub_date": "2005 Apr 8", @@ -38254,8 +36901,7 @@ }, "25695631": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of the mycobacterial acyl-CoA carboxylase holo complexes reveals their functional expansion into amino acid catabolism.", "pub_date": "2015 Feb", @@ -38269,8 +36915,7 @@ }, "15155722": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Unique features of the sodC-encoded superoxide dismutase from Mycobacterium tuberculosis, a fully functional copper-containing enzyme lacking zinc in the active site.", "pub_date": "2004 Aug 6", @@ -38284,8 +36929,7 @@ }, "20541534": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Role of a PAS sensor domain in the Mycobacterium tuberculosis transcription regulator Rv1364c.", "pub_date": "2010 Jul 30", @@ -38299,8 +36943,7 @@ }, "25490545": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An acyl-CoA synthetase in Mycobacterium tuberculosis involved in triacylglycerol accumulation during dormancy.", "pub_date": "2014", @@ -38314,8 +36957,7 @@ }, "18585090": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "In vitro and in vivo characterization of a Mycobacterium tuberculosis mutant deficient in glycosyltransferase Rv1500.", "pub_date": "2008 Oct", @@ -38329,8 +36971,7 @@ }, "11449276": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The heparin-binding haemagglutinin of M. tuberculosis is required for extrapulmonary dissemination.", "pub_date": "2001 Jul 12", @@ -38344,8 +36985,7 @@ }, "39881213": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Quinone extraction drives atmospheric carbon monoxide oxidation in bacteria.", "pub_date": "2025 Jul", @@ -38374,8 +37014,7 @@ }, "25557497": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Use of a \"silver bullet\" to resolve crystal lattice dislocation disorder: a cobalamin complex of \u03941-pyrroline-5-carboxylate dehydrogenase from Mycobacterium tuberculosis.", "pub_date": "2015 Feb", @@ -38389,8 +37028,7 @@ }, "19875455": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a carbon-carbon hydrolase from Mycobacterium tuberculosis involved in cholesterol metabolism.", "pub_date": "2010 Jan 1", @@ -38404,8 +37042,7 @@ }, "19190730": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Trypanosoma cruzi CYP51 inhibitor derived from a Mycobacterium tuberculosis screen hit.", "pub_date": "2009", @@ -38419,8 +37056,7 @@ }, "21818324": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of inhibitors against Mycobacterium tuberculosis thiamin phosphate synthase, an important target for the development of anti-TB drugs.", "pub_date": "2011", @@ -38434,8 +37070,7 @@ }, "21223593": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Bioinformatic evidence for a widely distributed, ribosomally produced electron carrier precursor, its maturation proteins, and its nicotinoprotein redox partners.", "pub_date": "2011 Jan 11", @@ -38449,8 +37084,7 @@ }, "15530359": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An alternate conformation and a third metal in PstP/Ppp, the M. tuberculosis PP2C-Family Ser/Thr protein phosphatase.", "pub_date": "2004 Nov", @@ -38464,8 +37098,7 @@ }, "19740754": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into the mechanism of the allosteric transitions of Mycobacterium tuberculosis cAMP receptor protein.", "pub_date": "2009 Dec 25", @@ -38479,8 +37112,7 @@ }, "23836904": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "MmpL11 protein transports mycolic acid-containing lipids to the mycobacterial cell wall and contributes to biofilm formation in Mycobacterium smegmatis.", "pub_date": "2013 Aug 16", @@ -38494,8 +37126,7 @@ }, "23819907": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Dormancy Associated Translation Inhibitor (DATIN/Rv0079) of Mycobacterium tuberculosis interacts with TLR2 and induces proinflammatory cytokine expression.", "pub_date": "2013 Oct", @@ -38509,8 +37140,7 @@ }, "37250168": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of anti-Mycobacterium tuberculosis agents targeting the interaction of bacterial division proteins FtsZ and SepFe.", "pub_date": "2023 May", @@ -38524,8 +37154,7 @@ }, "20132820": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of translation initiation factor 1 from Mycobacterium tuberculosis and inferred binding to the 30S ribosomal subunit.", "pub_date": "2010 Mar 5", @@ -38539,8 +37168,7 @@ }, "17005418": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and characterization of alpha-(1,4)-glucan branching enzyme Rv1326c of Mycobacterium tuberculosis H37Rv.", "pub_date": "2007 Feb", @@ -38554,8 +37182,7 @@ }, "32634279": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Depletion of the DarG antitoxin in Mycobacterium tuberculosis triggers the DNA-damage response and leads to cell death.", "pub_date": "2020 Oct", @@ -38569,8 +37196,7 @@ }, "16354663": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification and characterization of Rv3281 as a novel subunit of a biotin-dependent acyl-CoA Carboxylase in Mycobacterium tuberculosis H37Rv.", "pub_date": "2006 Feb 17", @@ -38584,8 +37210,7 @@ }, "20711362": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis proteasome active site threonine is essential for persistence yet dispensable for replication and resistance to nitric oxide.", "pub_date": "2010 Aug 12", @@ -38599,8 +37224,7 @@ }, "14617153": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "RshA, an anti-sigma factor that regulates the activity of the mycobacterial stress response sigma factor SigH.", "pub_date": "2003 Nov", @@ -38614,8 +37238,7 @@ }, "22976985": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A dynamic C-terminal segment in the Mycobacterium tuberculosis Mn/Fe R2lox protein can adopt a helical structure with possible functional consequences.", "pub_date": "2012 Sep", @@ -38629,8 +37252,7 @@ }, "23562345": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The lpqS knockout mutant of Mycobacterium tuberculosis is attenuated in macrophages.", "pub_date": "2013 Aug 25", @@ -38644,8 +37266,7 @@ }, "12100560": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Phospholipases C are involved in the virulence of Mycobacterium tuberculosis.", "pub_date": "2002 Jul", @@ -38659,8 +37280,7 @@ }, "22233444": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Polar assembly and scaffolding proteins of the virulence-associated ESX-1 secretory apparatus in mycobacteria.", "pub_date": "2012 Feb", @@ -38674,8 +37294,7 @@ }, "18062991": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structures of ornithine carbamoyltransferase from Mycobacterium tuberculosis and its ternary complex with carbamoyl phosphate and L-norvaline reveal the enzyme's catalytic mechanism.", "pub_date": "2008 Jan 25", @@ -38689,8 +37308,7 @@ }, "30890426": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of Rv2991 from Mycobacterium tuberculosis: An F(420) binding protein with unknown function.", "pub_date": "2019 May 1", @@ -38704,8 +37322,7 @@ }, "16048998": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional analysis of early secreted antigenic target-6, the dominant T-cell antigen of Mycobacterium tuberculosis, reveals key residues involved in secretion, complex formation, virulence, and immunogenicity.", "pub_date": "2005 Oct 7", @@ -38719,8 +37336,7 @@ }, "15929999": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "X-ray structure of putative acyl-ACP desaturase DesA2 from Mycobacterium tuberculosis H37Rv.", "pub_date": "2005 Jun", @@ -38734,8 +37350,7 @@ }, "17698424": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A distinct role of formamidopyrimidine DNA glycosylase (MutM) in down-regulation of accumulation of G, C mutations and protection against oxidative stress in mycobacteria.", "pub_date": "2007 Dec 1", @@ -38763,8 +37378,7 @@ }, "32710080": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis FasR senses long fatty acyl-CoA through a tunnel and a hydrophobic transmission spine.", "pub_date": "2020 Jul 24", @@ -38778,8 +37392,7 @@ }, "22119138": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical characterization of recombinant guaA-encoded guanosine monophosphate synthetase (EC 6.3.5.2) from Mycobacterium tuberculosis H37Rv strain.", "pub_date": "2012 Jan 1", @@ -38807,8 +37420,7 @@ }, "28625787": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural Snapshots and Loop Dynamics along the Catalytic Cycle of Glycosyltransferase GpgS.", "pub_date": "2017 Jul 5", @@ -38822,8 +37434,7 @@ }, "26628360": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Unsaturated Lipid Assimilation by Mycobacteria Requires Auxiliary cis-trans Enoyl CoA Isomerase.", "pub_date": "2015 Dec 17", @@ -38837,8 +37448,7 @@ }, "8596438": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis is a natural mutant with an inactivated oxidative-stress regulatory gene: implications for sensitivity to isoniazid.", "pub_date": "1995 Sep", @@ -38852,8 +37462,7 @@ }, "26902658": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE11, a PE/PPE family protein of Mycobacterium tuberculosis is involved in cell wall remodeling and virulence.", "pub_date": "2016 Feb 23", @@ -38867,8 +37476,7 @@ }, "26822628": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Towards understanding the biological function of the unusual chaperonin Cpn60.1 (GroEL1) of Mycobacterium tuberculosis.", "pub_date": "2016 Mar", @@ -38882,8 +37490,7 @@ }, "26324178": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Octanoylation of early intermediates of mycobacterial methylglucose lipopolysaccharides.", "pub_date": "2015 Sep 1", @@ -38897,8 +37504,7 @@ }, "17328725": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PPE protein (Rv3425) from DNA segment RD11 of Mycobacterium tuberculosis: a potential B-cell antigen used for serological diagnosis to distinguish vaccinated controls from tuberculosis patients.", "pub_date": "2007 Feb", @@ -38912,8 +37518,7 @@ }, "17059828": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural and biochemical analysis of the Rv0805 cyclic nucleotide phosphodiesterase from Mycobacterium tuberculosis.", "pub_date": "2007 Jan 5", @@ -38927,8 +37532,7 @@ }, "17635188": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A highly conserved transcriptional repressor controls a large regulon involved in lipid degradation in Mycobacterium smegmatis and Mycobacterium tuberculosis.", "pub_date": "2007 Aug", @@ -38942,8 +37546,7 @@ }, "31000162": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a novel carboxypeptidase encoded by Rv3627c that plays a potential role in mycobacteria morphology and cell division.", "pub_date": "2019 Jul", @@ -38957,8 +37560,7 @@ }, "26136334": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A Native Ternary Complex Trapped in a Crystal Reveals the Catalytic Mechanism of a Retaining Glycosyltransferase.", "pub_date": "2015 Aug 17", @@ -38972,8 +37574,7 @@ }, "23108860": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PknE, a serine/threonine protein kinase from Mycobacterium tuberculosis has a role in adaptive responses.", "pub_date": "2013 Jan", @@ -38987,8 +37588,7 @@ }, "12927792": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Protein PknE, a novel transmembrane eukaryotic-like serine/threonine kinase from Mycobacterium tuberculosis.", "pub_date": "2003 Sep 5", @@ -39002,8 +37602,7 @@ }, "19876400": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The role of UPF0157 in the folding of M. tuberculosis dephosphocoenzyme A kinase and the regulation of the latter by CTP.", "pub_date": "2009 Oct 30", @@ -39017,8 +37616,7 @@ }, "23620594": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Substrate and reaction specificity of Mycobacterium tuberculosis cytochrome P450 CYP121: insights from biochemical studies and crystal structures.", "pub_date": "2013 Jun 14", @@ -39032,8 +37630,7 @@ }, "27987050": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis PE_PGRS18 enhances the intracellular survival of M. smegmatis via altering host macrophage cytokine profiling and attenuating the cell apoptosis.", "pub_date": "2017 Apr", @@ -39047,8 +37644,7 @@ }, "18329386": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of operator sites within the upstream region of the putative mce2R gene from mycobacteria.", "pub_date": "2008 Apr 2", @@ -39062,8 +37658,7 @@ }, "19661058": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of apolipoprotein N-acyltransferase (Lnt) in mycobacteria.", "pub_date": "2009 Oct 2", @@ -39077,8 +37672,7 @@ }, "19906174": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Potential role for ESAT6 in dissemination of M. tuberculosis via human lung epithelial cells.", "pub_date": "2010 Jan", @@ -39092,8 +37686,7 @@ }, "33193236": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "FasR Regulates Fatty Acid Biosynthesis and Is Essential for Virulence of Mycobacterium tuberculosis.", "pub_date": "2020", @@ -39107,8 +37700,7 @@ }, "18479467": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Hexameric ring structure of the N-terminal domain of Mycobacterium tuberculosis DnaB helicase.", "pub_date": "2008 Jun", @@ -39122,8 +37714,7 @@ }, "10655617": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of the secreted form of antigen 85C reveals potential targets for mycobacterial drugs and vaccines.", "pub_date": "2000 Feb", @@ -39137,8 +37728,7 @@ }, "15165233": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Role of KatG catalase-peroxidase in mycobacterial pathogenesis: countering the phagocyte oxidative burst.", "pub_date": "2004 Jun", @@ -39152,8 +37742,7 @@ }, "19394344": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structures of glycinamide ribonucleotide transformylase (PurN) from Mycobacterium tuberculosis reveal a novel dimer with relevance to drug discovery.", "pub_date": "2009 Jun 19", @@ -39167,8 +37756,7 @@ }, "11489128": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis ECF sigma factor sigmaE: role in global gene expression and survival in macrophages.", "pub_date": "2001 Jul", @@ -39182,8 +37770,7 @@ }, "25547657": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "ubiA (Rv3806c) encoding DPPR synthase involved in cell wall synthesis is associated with ethambutol resistance in Mycobacterium tuberculosis.", "pub_date": "2015 Mar", @@ -39198,7 +37785,6 @@ "21364279": { "groups": [ "mtuberculosis", - "escherichia_coli", "hsp_70" ], "title": "Mycobacteria release active membrane vesicles that modulate immune responses in a TLR2-dependent manner in mice.", @@ -39213,8 +37799,7 @@ }, "12842040": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of M tuberculosis ABC phosphate transport receptor: specificity and charge compensation dominated by ion-dipole interactions.", "pub_date": "2003 Jul", @@ -39228,8 +37813,7 @@ }, "23620593": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of the mycosin-1 protease from the mycobacterial ESX-1 protein type VII secretion system.", "pub_date": "2013 Jun 14", @@ -39243,8 +37827,7 @@ }, "35202441": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Retraction:\u00a0Novel Role of Phosphorylation-Dependent Interaction between FtsZ and FipA in Mycobacterial Cell Division.", "pub_date": "2022", @@ -39258,8 +37841,7 @@ }, "15987910": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis serine/threonine kinases PknB, PknD, PknE, and PknF phosphorylate multiple FHA domains.", "pub_date": "2005 Jul", @@ -39273,8 +37855,7 @@ }, "22344175": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Inhibition of mycolic acid transport across the Mycobacterium tuberculosis plasma membrane.", "pub_date": "2012 Feb 19", @@ -39288,8 +37869,7 @@ }, "16476729": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure and nonhomologous end-joining function of the ligase component of Mycobacterium DNA ligase D.", "pub_date": "2006 May 12", @@ -39303,8 +37883,7 @@ }, "22524898": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "ESX-1-mediated translocation to the cytosol controls virulence of mycobacteria.", "pub_date": "2012 Aug", @@ -39318,8 +37897,7 @@ }, "23110042": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Tat-dependent translocation of an F420-binding protein of Mycobacterium tuberculosis.", "pub_date": "2012", @@ -39333,8 +37911,7 @@ }, "20933472": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Effect of PstS sub-units or PknD deficiency on the survival of Mycobacterium tuberculosis.", "pub_date": "2010 Nov", @@ -39348,8 +37925,7 @@ }, "25713147": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Protein kinase A (PknA) of Mycobacterium tuberculosis is independently activated and is critical for growth in vitro and survival of the pathogen in the host.", "pub_date": "2015 Apr 10", @@ -39363,8 +37939,7 @@ }, "15939292": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression and purification of a functionally active recombinant GDP-mannosyltransferase (PimA) from Mycobacterium tuberculosis H37Rv.", "pub_date": "2005 Jul", @@ -39378,8 +37953,7 @@ }, "38548954": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "An oligopeptide permease, OppABCD, requires an iron-sulfur cluster domain for functionality.", "pub_date": "2024 Jul", @@ -39393,8 +37967,7 @@ }, "18550384": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Matrix-assisted refolding and redox properties of WhiB3/Rv3416 of Mycobacterium tuberculosis H37Rv.", "pub_date": "2008 Sep", @@ -39408,8 +37981,7 @@ }, "22138550": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Deletion and overexpression studies on DacB2, a putative low molecular mass penicillin binding protein from Mycobacterium tuberculosis H(37)Rv.", "pub_date": "2012 Feb", @@ -39423,8 +37995,7 @@ }, "19300498": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Studies of a ring-cleaving dioxygenase illuminate the role of cholesterol metabolism in the pathogenesis of Mycobacterium tuberculosis.", "pub_date": "2009 Mar", @@ -39438,8 +38009,7 @@ }, "12054870": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of shikimate kinase from Mycobacterium tuberculosis reveals the dynamic role of the LID domain in catalysis.", "pub_date": "2002 Jun 7", @@ -39453,8 +38023,7 @@ }, "26768127": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Lipoprotein LpqS deficient M. tuberculosis mutant is attenuated for virulence in vivo and shows protective efficacy better than BCG in guinea pigs.", "pub_date": "2016 Feb 3", @@ -39468,8 +38037,7 @@ }, "24312350": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Heterologous expression of mycobacterial Esx complexes in Escherichia coli for structural studies is facilitated by the use of maltose binding protein fusions.", "pub_date": "2013", @@ -39483,8 +38051,7 @@ }, "8472958": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Sequence of a newly identified Mycobacterium tuberculosis gene encoding a protein with sequence homology to virulence-regulating proteins.", "pub_date": "1993 Apr 15", @@ -39498,8 +38065,7 @@ }, "18258191": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical characterization of a chromosomal toxin-antitoxin system in Mycobacterium tuberculosis.", "pub_date": "2008 Mar 5", @@ -39513,8 +38079,7 @@ }, "25224799": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of a novel exported esterase Rv3036c from Mycobacterium tuberculosis.", "pub_date": "2014 Dec", @@ -39528,8 +38093,7 @@ }, "18028308": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "PE is a functional domain responsible for protein translocation and localization on mycobacterial cell wall.", "pub_date": "2007 Dec", @@ -39543,8 +38107,7 @@ }, "23625916": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structures of Mycobacterium tuberculosis FadD10 protein reveal a new type of adenylate-forming enzyme.", "pub_date": "2013 Jun 21", @@ -39558,8 +38121,7 @@ }, "26900152": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Insight into Structure-Function Relationships and Inhibition of the Fatty Acyl-AMP Ligase (FadD32) Orthologs from Mycobacteria.", "pub_date": "2016 Apr 8", @@ -39573,8 +38135,7 @@ }, "27249779": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis Thioredoxin Reductase Is Essential for Thiol Redox Homeostasis but Plays a Minor Role in Antioxidant Defense.", "pub_date": "2016 Jun", @@ -39588,8 +38149,7 @@ }, "9831524": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a Mycobacterium tuberculosis gene cluster encoding the biosynthetic enzymes for assembly of the virulence-conferring siderophore mycobactin.", "pub_date": "1998 Nov", @@ -39603,8 +38163,7 @@ }, "31369208": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The crystal structure of AcrR from Mycobacterium\u00a0tuberculosis reveals a one-component transcriptional regulation mechanism.", "pub_date": "2019 Oct", @@ -39618,8 +38177,7 @@ }, "36699703": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural insights into 3Fe-4S ferredoxins diversity in M. tuberculosis highlighted by a first redox complex with P450.", "pub_date": "2022", @@ -39633,8 +38191,7 @@ }, "11839758": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Adenylyl cyclase Rv1264 from Mycobacterium tuberculosis has an autoinhibitory N-terminal domain.", "pub_date": "2002 May 3", @@ -39648,8 +38205,7 @@ }, "19766723": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Expression, purification and characterization of UvrD2 helicase from Mycobacterium tuberculosis.", "pub_date": "2010 Feb", @@ -39663,8 +38219,7 @@ }, "30765225": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structural analysis of molybdopterin synthases from two mycobacterial pathogens.", "pub_date": "2019 Mar 26", @@ -39678,8 +38233,7 @@ }, "17524985": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Identification of a type III thioesterase reveals the function of an operon crucial for Mtb virulence.", "pub_date": "2007 May", @@ -39693,8 +38247,7 @@ }, "19618417": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of the Rv3377c gene product, a type-B diterpene cyclase, from the Mycobacterium tuberculosis H37 genome.", "pub_date": "2009 Aug 17", @@ -39708,8 +38261,7 @@ }, "34322125": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium\u00a0tuberculosis\u00a0Protein PE6 (Rv0335c), a Novel TLR4 Agonist, Evokes an Inflammatory Response and Modulates the Cell Death Pathways in Macrophages to Enhance Intracellular Survival.", "pub_date": "2021", @@ -39723,8 +38275,7 @@ }, "27353550": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Biochemical evidence for relaxed substrate specificity of N\u03b1-acetyltransferase (Rv3420c/rimI) of Mycobacterium tuberculosis.", "pub_date": "2016 Jun 29", @@ -39738,8 +38289,7 @@ }, "31088763": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Two-component kinase TrcS complements Mycobacterium smegmatis mtrB kinase mutant.", "pub_date": "2019 May", @@ -39753,8 +38303,7 @@ }, "18201201": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Characterization of Mycobacterium tuberculosis nicotinamidase/pyrazinamidase.", "pub_date": "2008 Feb", @@ -39768,8 +38317,7 @@ }, "21117233": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Structure of the Mycobacterium tuberculosis OmpATb protein: a model of an oligomeric channel in the mycobacterial cell wall.", "pub_date": "2011 Feb", @@ -39783,8 +38331,7 @@ }, "26031846": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "The Mycobacterium tuberculosis protein pair PE9 (Rv1088)-PE10 (Rv1089) forms heterodimers and induces macrophage apoptosis through Toll-like receptor 4.", "pub_date": "2015 Nov", @@ -39798,8 +38345,7 @@ }, "8918249": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "A Mycobacterium tuberculosis gene cluster encoding proteins of a phosphate transporter homologous to the Escherichia coli Pst system.", "pub_date": "1996 Oct 17", @@ -39813,8 +38359,7 @@ }, "21864539": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Peptidoglycan remodeling in Mycobacterium tuberculosis: comparison of structures and catalytic activities of RipA and RipB.", "pub_date": "2011 Oct 14", @@ -39828,8 +38373,7 @@ }, "18096200": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Probing reactivity and substrate specificity of both subunits of the dimeric Mycobacterium tuberculosis FabH using alkyl-CoA disulfide inhibitors and acyl-CoA substrates.", "pub_date": "2008 Apr", @@ -39843,8 +38387,7 @@ }, "21637775": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Crystal structure of a novel esterase Rv0045c from Mycobacterium tuberculosis.", "pub_date": "2011", @@ -39858,8 +38401,7 @@ }, "16256440": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Deciphering the genes involved in pathogenesis of Mycobacterium tuberculosis.", "pub_date": "2005 Sep-Nov", @@ -39873,8 +38415,7 @@ }, "18086676": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Amino acids allosterically regulate the thiamine diphosphate-dependent alpha-keto acid decarboxylase from Mycobacterium tuberculosis.", "pub_date": "2008 Feb 29", @@ -39888,8 +38429,7 @@ }, "24989449": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Fluorogenic probes with substitutions at the 2 and 7 positions of cephalosporin are highly BlaC-specific for rapid Mycobacterium tuberculosis detection.", "pub_date": "2014 Aug 25", @@ -39903,8 +38443,7 @@ }, "26637353": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Mycobacterium tuberculosis WhiB3 Responds to Vacuolar pH-induced Changes in Mycothiol Redox Potential to Modulate Phagosomal Maturation and Virulence.", "pub_date": "2016 Feb 5", @@ -39918,8 +38457,7 @@ }, "34915127": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Deep N-terminomics of Mycobacterium tuberculosis H37Rv extensively correct annotated encoding genes.", "pub_date": "2022 Jan", @@ -39933,8 +38471,7 @@ }, "11929522": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Functional genomics reveals the sole sulphate transporter of the Mycobacterium tuberculosis complex and its relevance to the acquisition of sulphur in vivo.", "pub_date": "2002 Feb", @@ -39948,8 +38485,7 @@ }, "25865481": { "groups": [ - "mtuberculosis", - "escherichia_coli" + "mtuberculosis" ], "title": "Substrates Control Multimerization and Activation of the Multi-Domain ATPase Motor of Type VII Secretion.", "pub_date": "2015 Apr 23", @@ -39963,8 +38499,7 @@ }, "15286723": { "groups": [ - 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"28698272": { + "23690068": { "groups": [ "escherichia_coli" ], - "title": "Mycobacterium tuberculosis PhoY Proteins Promote Persister Formation by Mediating Pst/SenX3-RegX3 Phosphate Sensing.", - "pub_date": "2017 Jul 11", - "source": "mBio", - "url": "https://pubmed.ncbi.nlm.nih.gov/28698272/", + "title": "Molecular insights into microbial \u03b2-glucuronidase inhibition to abrogate CPT-11 toxicity.", + "pub_date": "2013 Aug", + "source": "Mol Pharmacol", + "url": "https://pubmed.ncbi.nlm.nih.gov/23690068/", "format": "xml", "uniprot_ids": [], "protein_names": [], "organisms": [], "n_uniprot_entries": 0 }, - "11483493": { + "14717711": { "groups": [ "escherichia_coli" ], - "title": "Mycobacterium tuberculosis hemoglobin N displays a protein tunnel suited for O2 diffusion to the heme.", - "pub_date": "2001 Aug 1", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/11483493/", + "title": "Crystal structure of the chi:psi sub-assembly of the Escherichia coli DNA polymerase clamp-loader complex.", + "pub_date": "2004 Jan", + "source": "Eur J Biochem", + "url": "https://pubmed.ncbi.nlm.nih.gov/14717711/", "format": "pdf", "uniprot_ids": [], "protein_names": [], @@ -42512,20 +108253,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "32966796": { - "groups": [ - "hsp_70" - ], - "title": "The YdiU Domain Modulates Bacterial Stress Signaling through Mn(2+)-Dependent UMPylation.", - "pub_date": "2020 Sep 22", - "source": "Cell Rep", - "url": "https://pubmed.ncbi.nlm.nih.gov/32966796/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "10936104": { "groups": [ "hsp_70" @@ -43684,21 +109411,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "9298644": { - "groups": [ - "hsp_70", - "sgtpb" - ], - "title": "Escherichia coli proteome analysis using the gene-protein database.", - "pub_date": "1997 Aug", - "source": "Electrophoresis", - "url": "https://pubmed.ncbi.nlm.nih.gov/9298644/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "18631365": { "groups": [ "hsp_70", @@ -44013,20 +109725,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "16079137": { - "groups": [ - "hsp_70" - ], - "title": "Protein complexes of the Escherichia coli cell envelope.", - "pub_date": "2005 Oct 14", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/16079137/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "9670014": { "groups": [ "hsp_70" @@ -44114,20 +109812,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "10742174": { - "groups": [ - "hsp_70" - ], - "title": "Structural insights into substrate binding by the molecular chaperone DnaK.", - "pub_date": "2000 Apr", - "source": "Nat Struct Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/10742174/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "8313870": { "groups": [ "hsp_70" @@ -44487,20 +110171,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "21908771": { - "groups": [ - "hsp_70" - ], - "title": "The first identification of lysine malonylation substrates and its regulatory enzyme.", - "pub_date": "2011 Dec", - "source": "Mol Cell Proteomics", - "url": "https://pubmed.ncbi.nlm.nih.gov/21908771/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "20506024": { "groups": [ "hsp_70" @@ -44515,20 +110185,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "28818726": { - "groups": [ - "hsp_70" - ], - "title": "Identification of functional interactome of a key cell division regulatory protein CedA of E.coli.", - "pub_date": "2018 Jan", - "source": "Int J Biol Macromol", - "url": "https://pubmed.ncbi.nlm.nih.gov/28818726/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "12954627": { "groups": [ "hsp_70" @@ -45331,21 +110987,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "21151122": { - "groups": [ - "hsp_70", - "sgtpb" - ], - "title": "Identification of lysine succinylation as a new post-translational modification.", - "pub_date": "2011 Jan", - "source": "Nat Chem Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/21151122/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "2116528": { "groups": [ "hsp_70" @@ -45700,20 +111341,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "2674651": { - "groups": [ - "hsp_70" - ], - "title": "Involvement of DnaK protein in mini-F plasmid replication: temperature-sensitive seg mutations are located in the dnaK gene.", - "pub_date": "1989 Aug", - "source": "Mol Gen Genet", - "url": "https://pubmed.ncbi.nlm.nih.gov/2674651/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "19187283": { "groups": [ "hsp_70", @@ -46216,20 +111843,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "9144776": { - "groups": [ - "hsp_70" - ], - "title": "Hsc66 and Hsc20, a new heat shock cognate molecular chaperone system from Escherichia coli.", - "pub_date": "1997 May", - "source": "Protein Sci", - "url": "https://pubmed.ncbi.nlm.nih.gov/9144776/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "18159241": { "groups": [ "hsp_70", @@ -47594,20 +113207,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "9735342": { - "groups": [ - "hsp_70" - ], - "title": "Hsc62, a new DnaK homologue of Escherichia coli.", - "pub_date": "1998 Sep 8", - "source": "Biochem Biophys Res Commun", - "url": "https://pubmed.ncbi.nlm.nih.gov/9735342/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "23973223": { "groups": [ "hsp_70" @@ -48139,20 +113738,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "14726952": { - "groups": [ - "hsp_70" - ], - "title": "In vivo analysis of the overlapping functions of DnaK and trigger factor.", - "pub_date": "2004 Feb", - "source": "EMBO Rep", - "url": "https://pubmed.ncbi.nlm.nih.gov/14726952/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "8131751": { "groups": [ "hsp_70" @@ -50362,20 +115947,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7940673": { - "groups": [ - "hsp_70" - ], - "title": "New genes in old sequence: a strategy for finding genes in the bacterial genome.", - "pub_date": "1994 Aug", - "source": "Trends Biochem Sci", - "url": "https://pubmed.ncbi.nlm.nih.gov/7940673/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "15461803": { "groups": [ "hsp_70", @@ -50967,21 +116538,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7783627": { - "groups": [ - "hsp_70", - "sgtpb" - ], - "title": "Identification of phosphoproteins in Escherichia coli.", - "pub_date": "1995 Feb", - "source": "Mol Microbiol", - "url": "https://pubmed.ncbi.nlm.nih.gov/7783627/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "24558247": { "groups": [ "hsp_70", @@ -51671,20 +117227,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "1396676": { - "groups": [ - "hsp_70" - ], - "title": "Precursor of mitochondrial aspartate aminotransferase synthesized in Escherichia coli is complexed with heat-shock protein DnaK.", - "pub_date": "1992 Sep 15", - "source": "Eur J Biochem", - "url": "https://pubmed.ncbi.nlm.nih.gov/1396676/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "8719168": { "groups": [ "hsp_70" @@ -52648,20 +118190,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "12730230": { - "groups": [ - "sgtpb" - ], - "title": "The GTPase activity and C-terminal cysteine of the Escherichia coli MnmE protein are essential for its tRNA modifying function.", - "pub_date": "2003 Aug 1", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/12730230/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "22939626": { "groups": [ "sgtpb" @@ -52816,34 +118344,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "9918724": { - "groups": [ - "sgtpb" - ], - "title": "Crystal structure of intact elongation factor EF-Tu from Escherichia coli in GDP conformation at 2.05 A resolution.", - "pub_date": "1999 Jan 22", - "source": "J Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/9918724/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, - "17110332": { - "groups": [ - "sgtpb" - ], - "title": "The highly conserved LepA is a ribosomal elongation factor that back-translocates the ribosome.", - "pub_date": "2006 Nov 17", - "source": "Cell", - "url": "https://pubmed.ncbi.nlm.nih.gov/17110332/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "3311726": { "groups": [ "sgtpb" @@ -53390,20 +118890,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "9428651": { - "groups": [ - "sgtpb" - ], - "title": "E. coli translation initiation factor IF2--an extremely conserved protein. Comparative sequence analysis of the infB gene in clinical isolates of E. coli.", - "pub_date": "1997 Dec 15", - "source": "FEBS Lett", - "url": "https://pubmed.ncbi.nlm.nih.gov/9428651/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "12906785": { "groups": [ "sgtpb" @@ -53909,20 +119395,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "12093756": { - "groups": [ - "sgtpb" - ], - "title": "Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process.", - "pub_date": "2002 Jul 1", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/12093756/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "17344846": { "groups": [ "sgtpb" @@ -54161,20 +119633,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "2684669": { - "groups": [ - "sgtpb" - ], - "title": "Substitution of Val20 by Gly in elongation factor Tu. Effects on the interaction with elongation factors Ts, aminoacyl-tRNA and ribosomes.", - "pub_date": "1989 Nov 6", - "source": "Eur J Biochem", - "url": "https://pubmed.ncbi.nlm.nih.gov/2684669/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "2610926": { "groups": [ "sgtpb" @@ -54469,20 +119927,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "26163516": { - "groups": [ - "sgtpb" - ], - "title": "Structural and Functional Analysis of BipA, a Regulator of Virulence in Enteropathogenic Escherichia coli.", - "pub_date": "2015 Aug 21", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/26163516/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "30905672": { "groups": [ "sgtpb" @@ -54497,20 +119941,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "20045415": { - "groups": [ - "sgtpb" - ], - "title": "Interrupted catalysis: the EF4 (LepA) effect on back-translocation.", - "pub_date": "2010 Mar 5", - "source": "J Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/20045415/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "20386726": { "groups": [ "sgtpb" @@ -54637,20 +120067,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "10527840": { - "groups": [ - "sgtpb" - ], - "title": "Era, an essential Escherichia coli small G-protein, binds to the 30S ribosomal subunit.", - "pub_date": "1999 Oct 14", - "source": "Biochem Biophys Res Commun", - "url": "https://pubmed.ncbi.nlm.nih.gov/10527840/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "16307016": { "groups": [ "sgtpb" @@ -54973,20 +120389,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "22884418": { - "groups": [ - "sgtpb" - ], - "title": "Mechanism for template-independent terminal adenylation activity of Q\u03b2 replicase.", - "pub_date": "2012 Oct 10", - "source": "Structure", - "url": "https://pubmed.ncbi.nlm.nih.gov/22884418/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "19274794": { "groups": [ "sgtpb" @@ -55799,20 +121201,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "775340": { - "groups": [ - "sgtpb" - ], - "title": "Abundance and membrane association of elongation factor Tu in E. coli.", - "pub_date": "1976 May 6", - "source": "Nature", - "url": "https://pubmed.ncbi.nlm.nih.gov/775340/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "23624502": { "groups": [ "sgtpb" @@ -55953,20 +121341,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7035813": { - "groups": [ - "sgtpb" - ], - "title": "Transcription of the E. coli tufB gene: cotranscription with four tRNA genes and inhibition by guanosine-5'-diphosphate-3'-diphosphate.", - "pub_date": "1981", - "source": "Mol Gen Genet", - "url": "https://pubmed.ncbi.nlm.nih.gov/7035813/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "7651326": { "groups": [ "sgtpb" @@ -56387,20 +121761,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "3908095": { - "groups": [ - "sgtpb" - ], - "title": "Structural details of the binding of guanosine diphosphate to elongation factor Tu from E. coli as studied by X-ray crystallography.", - "pub_date": "1985 Sep", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/3908095/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "15263003": { "groups": [ "sgtpb" @@ -56499,34 +121859,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "12859903": { - "groups": [ - "sgtpb" - ], - "title": "Locking and unlocking of ribosomal motions.", - "pub_date": "2003 Jul 11", - "source": "Cell", - "url": "https://pubmed.ncbi.nlm.nih.gov/12859903/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, - "8939740": { - "groups": [ - "sgtpb" - ], - "title": "An alpha to beta conformational switch in EF-Tu.", - "pub_date": "1996 Oct 15", - "source": "Structure", - "url": "https://pubmed.ncbi.nlm.nih.gov/8939740/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "27660391": { "groups": [ "sgtpb" @@ -56835,20 +122167,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "1374802": { - "groups": [ - "sgtpb" - ], - "title": "Both forms of translational initiation factor IF2 (alpha and beta) are required for maximal growth of Escherichia coli. Evidence for two translational initiation codons for IF2 beta.", - "pub_date": "1992 May 5", - "source": "J Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/1374802/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "9857026": { "groups": [ "sgtpb" @@ -56863,20 +122181,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "12753192": { - "groups": [ - "sgtpb" - ], - "title": "Suppression of defective ribosome assembly in a rbfA deletion mutant by overexpression of Era, an essential GTPase in Escherichia coli.", - "pub_date": "2003 May", - "source": "Mol Microbiol", - "url": "https://pubmed.ncbi.nlm.nih.gov/12753192/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "11278565": { "groups": [ "sgtpb" @@ -56989,20 +122293,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "8344525": { - "groups": [ - "sgtpb" - ], - "title": "Sequence of the Escherichia coli K-12 edd and eda genes of the Entner-Doudoroff pathway.", - "pub_date": "1993 Aug 16", - "source": "Gene", - "url": "https://pubmed.ncbi.nlm.nih.gov/8344525/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "15033445": { "groups": [ "sgtpb" @@ -57255,20 +122545,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7686882": { - "groups": [ - "sgtpb" - ], - "title": "DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication.", - "pub_date": "1993 Jun", - "source": "Genomics", - "url": "https://pubmed.ncbi.nlm.nih.gov/7686882/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "26701913": { "groups": [ "sgtpb" @@ -57661,20 +122937,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "1764105": { - "groups": [ - "sgtpb" - ], - "title": "Tandem translation of E. coli initiation factor IF2 beta: purification and characterization in vitro of two active forms.", - "pub_date": "1991 Dec 31", - "source": "Biochem Biophys Res Commun", - "url": "https://pubmed.ncbi.nlm.nih.gov/1764105/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "16541075": { "groups": [ "sgtpb" @@ -57773,20 +123035,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "28973472": { - "groups": [ - "sgtpb" - ], - "title": "Structure of a novel antibacterial toxin that exploits elongation factor Tu to cleave specific transfer RNAs.", - "pub_date": "2017 Sep 29", - "source": "Nucleic Acids Res", - "url": "https://pubmed.ncbi.nlm.nih.gov/28973472/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "11043518": { "groups": [ "sgtpb" @@ -57857,20 +123105,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "20188109": { - "groups": [ - "sgtpb" - ], - "title": "The effect of ribosome assembly cofactors on in vitro 30S subunit reconstitution.", - "pub_date": "2010 Apr 23", - "source": "J Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/20188109/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "19165333": { "groups": [ "sgtpb" @@ -57983,20 +123217,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "16781472": { - "groups": [ - "sgtpb" - ], - "title": "Functional Qbeta replicase genetically fusing essential subunits EF-Ts and EF-Tu with beta-subunit.", - "pub_date": "2006 May", - "source": "J Biosci Bioeng", - "url": "https://pubmed.ncbi.nlm.nih.gov/16781472/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "2743981": { "groups": [ "sgtpb" @@ -58011,20 +123231,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "8985244": { - "groups": [ - "sgtpb" - ], - "title": "Hydrolysis of GTP by elongation factor G drives tRNA movement on the ribosome.", - "pub_date": "1997 Jan 2", - "source": "Nature", - "url": "https://pubmed.ncbi.nlm.nih.gov/8985244/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "8810259": { "groups": [ "sgtpb" @@ -59174,20 +124380,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "20434458": { - "groups": [ - "sgtpb" - ], - "title": "A bacterial GAP-like protein, YihI, regulating the GTPase of Der, an essential GTP-binding protein in Escherichia coli.", - "pub_date": "2010 Jun 25", - "source": "J Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/20434458/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "24369434": { "groups": [ "sgtpb" @@ -59286,20 +124478,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "21750663": { - "groups": [ - "sgtpb" - ], - "title": "The Cryo-EM structure of a complete 30S translation initiation complex from Escherichia coli.", - "pub_date": "2011 Jul", - "source": "PLoS Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/21750663/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "16332443": { "groups": [ "sgtpb" @@ -60294,20 +125472,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "17062623": { - "groups": [ - "sgtpb" - ], - "title": "Further insights into the tRNA modification process controlled by proteins MnmE and GidA of Escherichia coli.", - "pub_date": "2006", - "source": "Nucleic Acids Res", - "url": "https://pubmed.ncbi.nlm.nih.gov/17062623/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "18779367": { "groups": [ "sgtpb" @@ -60798,20 +125962,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "6997043": { - "groups": [ - "sgtpb" - ], - "title": "The complete amino-acid sequence of elongation factor Tu from Escherichia coli.", - "pub_date": "1980 Jul", - "source": "Eur J Biochem", - "url": "https://pubmed.ncbi.nlm.nih.gov/6997043/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "14580338": { "groups": [ "sgtpb" @@ -61288,20 +126438,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "22562136": { - "groups": [ - "sgtpb" - ], - "title": "Real-time assembly landscape of bacterial 30S translation initiation complex.", - "pub_date": "2012 May 6", - "source": "Nat Struct Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/22562136/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "1918138": { "groups": [ "sgtpb" @@ -61554,20 +126690,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "9468511": { - "groups": [ - "sgtpb" - ], - "title": "Mutational analysis of the roles of residues in Escherichia coli elongation factor Ts in the interaction with elongation factor Tu.", - "pub_date": "1998 Feb 20", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/9468511/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "21304667": { "groups": [ "sgtpb" @@ -62072,20 +127194,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "17143896": { - "groups": [ - "sgtpb" - ], - "title": "Structural insights into the GTPase domain of Escherichia coli MnmE protein.", - "pub_date": "2007 Feb 15", - "source": "Proteins", - "url": "https://pubmed.ncbi.nlm.nih.gov/17143896/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "23091056": { "groups": [ "sgtpb" @@ -62156,20 +127264,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "9622352": { - "groups": [ - "sgtpb" - ], - "title": "BipA: a tyrosine-phosphorylated GTPase that mediates interactions between enteropathogenic Escherichia coli (EPEC) and epithelial cells.", - "pub_date": "1998 Apr", - "source": "Mol Microbiol", - "url": "https://pubmed.ncbi.nlm.nih.gov/9622352/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "28076346": { "groups": [ "sgtpb" @@ -64019,20 +129113,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "10601028": { - "groups": [ - "sgtpb" - ], - "title": "The Escherichia coli trmE (mnmE) gene, involved in tRNA modification, codes for an evolutionarily conserved GTPase with unusual biochemical properties.", - "pub_date": "1999 Dec 15", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/10601028/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "2257629": { "groups": [ "sgtpb" @@ -64831,20 +129911,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "2508560": { - "groups": [ - "sgtpb" - ], - "title": "Site-directed mutagenesis of the GDP binding domain of bacterial elongation factor Tu.", - "pub_date": "1989 Nov 1", - "source": "Arch Biochem Biophys", - "url": "https://pubmed.ncbi.nlm.nih.gov/2508560/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "11180838": { "groups": [ "sgtpb" @@ -66609,20 +131675,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7525272": { - "groups": [ - "sgtpb" - ], - "title": "The structural and functional basis for the kirromycin resistance of mutant EF-Tu species in Escherichia coli.", - "pub_date": "1994 Oct 17", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/7525272/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "15680456": { "groups": [ "sgtpb" @@ -66805,34 +131857,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "10094501": { - "groups": [ - "sgtpb" - ], - "title": "Purification, characterization and crystallization of ERA, an essential GTPase from Escherichia coli.", - "pub_date": "1999 Feb 26", - "source": "FEBS Lett", - "url": "https://pubmed.ncbi.nlm.nih.gov/10094501/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, - "9642082": { - "groups": [ - "sgtpb" - ], - "title": "Tyrosine phosphorylation in Escherichia coli.", - "pub_date": "1998 Jun 26", - "source": "J Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/9642082/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "17555535": { "groups": [ "sgtpb" @@ -67183,20 +132207,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "16397293": { - "groups": [ - "sgtpb" - ], - "title": "Escherichia coli K-12: a cooperatively developed annotation snapshot--2005.", - "pub_date": "2006", - "source": "Nucleic Acids Res", - "url": "https://pubmed.ncbi.nlm.nih.gov/16397293/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "28289718": { "groups": [ "sgtpb" @@ -67911,20 +132921,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "20224578": { - "groups": [ - "sgtpb" - ], - "title": "The ribosome-bound initiation factor 2 recruits initiator tRNA to the 30S initiation complex.", - "pub_date": "2010 Apr", - "source": "EMBO Rep", - "url": "https://pubmed.ncbi.nlm.nih.gov/20224578/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "28009275": { "groups": [ "sgtpb" @@ -68289,20 +133285,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "30597160": { - "groups": [ - "sgtpb" - ], - "title": "ABCF ATPases Involved in Protein Synthesis, Ribosome Assembly and Antibiotic Resistance: Structural and Functional Diversification across the Tree of Life.", - "pub_date": "2019 Aug 23", - "source": "J Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/30597160/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "15710748": { "groups": [ "sgtpb" @@ -68373,20 +133355,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "12600987": { - "groups": [ - "sgtpb" - ], - "title": "A conserved structural motif at the N terminus of bacterial translation initiation factor IF2.", - "pub_date": "2003 May 2", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/12600987/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "21187014": { "groups": [ "sgtpb" @@ -68457,20 +133425,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "30305394": { - "groups": [ - "sgtpb" - ], - "title": "The GTPase BipA expressed at low temperature in Escherichia coli assists ribosome assembly and has chaperone-like activity.", - "pub_date": "2018 Nov 23", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/30305394/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "22248876": { "groups": [ "sgtpb" @@ -68541,20 +133495,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "15983041": { - "groups": [ - "sgtpb" - ], - "title": "Effects of mutagenesis in the switch I region and conserved arginines of Escherichia coli MnmE protein, a GTPase involved in tRNA modification.", - "pub_date": "2005 Sep 2", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/15983041/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "36250347": { "groups": [ "sgtpb" @@ -68667,20 +133607,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "8057845": { - "groups": [ - "sgtpb" - ], - "title": "Characterization of the autophosphorylation of Era, an essential Escherichia coli GTPase.", - "pub_date": "1994 Apr", - "source": "Mol Microbiol", - "url": "https://pubmed.ncbi.nlm.nih.gov/8057845/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "19061864": { "groups": [ "sgtpb" @@ -68975,20 +133901,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "19150849": { - "groups": [ - "sgtpb" - ], - "title": "Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB.", - "pub_date": "2009 Jan 16", - "source": "Science", - "url": "https://pubmed.ncbi.nlm.nih.gov/19150849/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "22696678": { "groups": [ "sgtpb" @@ -69031,20 +133943,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "8575429": { - "groups": [ - "sgtpb" - ], - "title": "Osmo-expression and fast two-step purification of Escherichia coli translation termination factor RF-3.", - "pub_date": "1995 Dec 15", - "source": "Eur J Biochem", - "url": "https://pubmed.ncbi.nlm.nih.gov/8575429/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "10655614": { "groups": [ "sgtpb" @@ -70936,20 +135834,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "11387344": { - "groups": [ - "sgtpb" - ], - "title": "An essential GTPase, der, containing double GTP-binding domains from Escherichia coli and Thermotoga maritima.", - "pub_date": "2001 Aug 17", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/11387344/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "29987160": { "groups": [ "sgtpb" @@ -71258,21 +136142,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "2826164": { - "groups": [ - "sgtpb", - "thermus_thermophilus" - ], - "title": "Molecular cloning and sequence determination of the tuf gene coding for the elongation factor Tu of Thermus thermophilus HB8.", - "pub_date": "1987 Dec 30", - "source": "Eur J Biochem", - "url": "https://pubmed.ncbi.nlm.nih.gov/2826164/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "7589240": { "groups": [ "sgtpb" @@ -71875,20 +136744,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7737996": { - "groups": [ - "sgtpb" - ], - "title": "Function of polypeptide chain release factor RF-3 in Escherichia coli. RF-3 action in termination is predominantly at UGA-containing stop signals.", - "pub_date": "1995 May 5", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/7737996/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "28561026": { "groups": [ "sgtpb" @@ -72001,20 +136856,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "16763562": { - "groups": [ - "sgtpb" - ], - "title": "Dimerisation-dependent GTPase reaction of MnmE: how potassium acts as GTPase-activating element.", - "pub_date": "2006 Jun 21", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/16763562/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "1544569": { "groups": [ "sgtpb" @@ -72225,20 +137066,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "25122749": { - "groups": [ - "sgtpb" - ], - "title": "Molecular insights into replication initiation by Q\u03b2 replicase using ribosomal protein S1.", - "pub_date": "2014", - "source": "Nucleic Acids Res", - "url": "https://pubmed.ncbi.nlm.nih.gov/25122749/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "36040231": { "groups": [ "sgtpb" @@ -72435,20 +137262,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "1542116": { - "groups": [ - "sgtpb" - ], - "title": "Refined structure of elongation factor EF-Tu from Escherichia coli.", - "pub_date": "1992 Feb 5", - "source": "J Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/1542116/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "21641266": { "groups": [ "sgtpb" @@ -72520,20 +137333,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "16930151": { - "groups": [ - "sgtpb" - ], - "title": "The tandem GTPase, Der, is essential for the biogenesis of 50S ribosomal subunits in Escherichia coli.", - "pub_date": "2006 Sep", - "source": "Mol Microbiol", - "url": "https://pubmed.ncbi.nlm.nih.gov/16930151/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "16002401": { "groups": [ "sgtpb" @@ -73137,20 +137936,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7957075": { - "groups": [ - "sgtpb" - ], - "title": "Pulvomycin-resistant mutants of E.coli elongation factor Tu.", - "pub_date": "1994 Nov 1", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/7957075/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "20154091": { "groups": [ "sgtpb" @@ -73697,20 +138482,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "29546243": { - "groups": [ - "sgtpb" - ], - "title": "Phosphorylation decelerates conformational dynamics in bacterial translation elongation factors.", - "pub_date": "2018 Mar", - "source": "Sci Adv", - "url": "https://pubmed.ncbi.nlm.nih.gov/29546243/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "8076820": { "groups": [ "sgtpb" @@ -73949,20 +138720,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "1805969": { - "groups": [ - "sgtpb" - ], - "title": "Structural and functional domains of E coli initiation factor IF2.", - "pub_date": "1991 Dec", - "source": "Biochimie", - "url": "https://pubmed.ncbi.nlm.nih.gov/1805969/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "27334615": { "groups": [ "sgtpb" @@ -74369,20 +139126,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "11683274": { - "groups": [ - "sgtpb" - ], - "title": "BipA is required for growth of Escherichia coi K12 at low temperature.", - "pub_date": "2001 Oct", - "source": "Mol Genet Genomics", - "url": "https://pubmed.ncbi.nlm.nih.gov/11683274/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "19409876": { "groups": [ "sgtpb" @@ -74719,20 +139462,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "22245970": { - "groups": [ - "sgtpb" - ], - "title": "Molecular basis for RNA polymerization by Q\u03b2 replicase.", - "pub_date": "2012 Jan 15", - "source": "Nat Struct Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/22245970/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "11943201": { "groups": [ "sgtpb" @@ -74971,20 +139700,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7011904": { - "groups": [ - "sgtpb" - ], - "title": "The nucleotide sequence of tufB and four nearby tRNA structural genes of Escherichia coli.", - "pub_date": "1980 Dec", - "source": "Gene", - "url": "https://pubmed.ncbi.nlm.nih.gov/7011904/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "15077114": { "groups": [ "sgtpb" @@ -75139,20 +139854,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "14566331": { - "groups": [ - "sgtpb" - ], - "title": "Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron microscopy.", - "pub_date": "2003 Nov", - "source": "Nat Struct Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/14566331/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "18094749": { "groups": [ "sgtpb" @@ -75181,20 +139882,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "7011903": { - "groups": [ - "sgtpb" - ], - "title": "The nucleotide sequence of the cloned tufA gene of Escherichia coli.", - "pub_date": "1980 Dec", - "source": "Gene", - "url": "https://pubmed.ncbi.nlm.nih.gov/7011903/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "3011420": { "groups": [ "sgtpb" @@ -75601,20 +140288,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "24095282": { - "groups": [ - "sgtpb" - ], - "title": "Molecular mechanism of bacterial persistence by HipA.", - "pub_date": "2013 Oct 24", - "source": "Mol Cell", - "url": "https://pubmed.ncbi.nlm.nih.gov/24095282/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "22935415": { "groups": [ "sgtpb" @@ -76665,20 +141338,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "24141193": { - "groups": [ - "sgtpb" - ], - "title": "The Fic protein Doc uses an inverted substrate to phosphorylate and inactivate EF-Tu.", - "pub_date": "2013 Dec", - "source": "Nat Chem Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/24141193/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "21734656": { "groups": [ "sgtpb" @@ -76777,34 +141436,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "15069072": { - "groups": [ - "sgtpb" - ], - "title": "Pre-binding of small protein B to a stalled ribosome triggers trans-translation.", - "pub_date": "2004 Jun 18", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/15069072/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, - "3894004": { - "groups": [ - "sgtpb" - ], - "title": "Two translational initiation sites in the infB gene are used to express initiation factor IF2 alpha and IF2 beta in Escherichia coli.", - "pub_date": "1985 Jan", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/3894004/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "15616586": { "groups": [ "sgtpb" @@ -76861,20 +141492,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "19172743": { - "groups": [ - "sgtpb" - ], - "title": "A new tRNA intermediate revealed on the ribosome during EF4-mediated back-translocation.", - "pub_date": "2008 Sep", - "source": "Nat Struct Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/19172743/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "9920784": { "groups": [ "sgtpb" @@ -78121,20 +142738,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "1398129": { - "groups": [ - "sgtpb" - ], - "title": "Comparison of the complete sequence of the str operon in Salmonella typhimurium and Escherichia coli.", - "pub_date": "1992 Oct 12", - "source": "Gene", - "url": "https://pubmed.ncbi.nlm.nih.gov/1398129/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "17074883": { "groups": [ "sgtpb" @@ -78612,20 +143215,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "15737924": { - "groups": [ - "sgtpb" - ], - "title": "Obg/CtgA, a signaling protein that controls replication, translation, and morphological development?", - "pub_date": "2005 Mar", - "source": "Dev Cell", - "url": "https://pubmed.ncbi.nlm.nih.gov/15737924/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "25529118": { "groups": [ "sgtpb" @@ -78682,20 +143271,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "27382067": { - "groups": [ - "sgtpb" - ], - "title": "Binding properties of YjeQ (RsgA), RbfA, RimM and Era to assembly intermediates of the 30S subunit.", - "pub_date": "2016 Nov 16", - "source": "Nucleic Acids Res", - "url": "https://pubmed.ncbi.nlm.nih.gov/27382067/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "9180696": { "groups": [ "sgtpb" @@ -79032,20 +143607,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "8596629": { - "groups": [ - "sgtpb" - ], - "title": "The structure of the Escherichia coli EF-Tu.EF-Ts complex at 2.5 A resolution.", - "pub_date": "1996 Feb 8", - "source": "Nature", - "url": "https://pubmed.ncbi.nlm.nih.gov/8596629/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "10744740": { "groups": [ "sgtpb" @@ -79662,20 +144223,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "9515700": { - "groups": [ - "sgtpb" - ], - "title": "Cell cycle arrest in Era GTPase mutants: a potential growth rate-regulated checkpoint in Escherichia coli.", - "pub_date": "1998 Feb", - "source": "Mol Microbiol", - "url": "https://pubmed.ncbi.nlm.nih.gov/9515700/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "9119394": { "groups": [ "sgtpb" @@ -79830,21 +144377,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "27224426": { - "groups": [ - "sgtpb", - "thermus_thermophilus" - ], - "title": "Elongation Factor Tu Prevents Misediting of Gly-tRNA(Gly) Caused by the Design Behind the Chiral Proofreading Site of D-Aminoacyl-tRNA Deacylase.", - "pub_date": "2016 May", - "source": "PLoS Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/27224426/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "35451551": { "groups": [ "sgtpb" @@ -80181,20 +144713,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "16257965": { - "groups": [ - "sgtpb" - ], - "title": "Enacyloxin IIa pinpoints a binding pocket of elongation factor Tu for development of novel antibiotics.", - "pub_date": "2006 Feb 3", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/16257965/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "8462872": { "groups": [ "sgtpb" @@ -81315,34 +145833,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "22621933": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Crystal structure of the largest subunit of a bacterial RNA-guided immune complex and its role in DNA target binding.", - "pub_date": "2012 Jun 29", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/22621933/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, - "15721603": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Light-driven enzymatic catalysis of DNA repair: a review of recent biophysical studies on photolyase.", - "pub_date": "2005 Feb 25", - "source": "Biochim Biophys Acta", - "url": "https://pubmed.ncbi.nlm.nih.gov/15721603/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "10064708": { "groups": [ "thermus_thermophilus" @@ -81525,20 +146015,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "12130657": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Cysteine activation is an inherent in vitro property of prolyl-tRNA synthetases.", - "pub_date": "2002 Sep 20", - "source": "J Biol Chem", - "url": "https://pubmed.ncbi.nlm.nih.gov/12130657/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "20053984": { "groups": [ "thermus_thermophilus" @@ -81637,20 +146113,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "28077875": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Structural basis of co-translational quality control by ArfA and RF2 bound to ribosome.", - "pub_date": "2017 Jan 26", - "source": "Nature", - "url": "https://pubmed.ncbi.nlm.nih.gov/28077875/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "8031907": { "groups": [ "thermus_thermophilus" @@ -81861,34 +146323,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "22622583": { - "groups": [ - "thermus_thermophilus" - ], - "title": "The complex of tmRNA-SmpB and EF-G on translocating ribosomes.", - "pub_date": "2012 May 6", - "source": "Nature", - "url": "https://pubmed.ncbi.nlm.nih.gov/22622583/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, - "26792896": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Structure of the mammalian antimicrobial peptide Bac7(1-16) bound within the exit tunnel of a bacterial ribosome.", - "pub_date": "2016 Mar 18", - "source": "Nucleic Acids Res", - "url": "https://pubmed.ncbi.nlm.nih.gov/26792896/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "17855371": { "groups": [ "thermus_thermophilus" @@ -81945,20 +146379,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "8119295": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Hydrophobic interaction at the subunit interface contributes to the thermostability of 3-isopropylmalate dehydrogenase from an extreme thermophile, Thermus thermophilus.", - "pub_date": "1994 Feb 15", - "source": "Eur J Biochem", - "url": "https://pubmed.ncbi.nlm.nih.gov/8119295/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "10214965": { "groups": [ "thermus_thermophilus" @@ -82015,20 +146435,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "25775268": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.", - "pub_date": "2015 Apr", - "source": "Nat Struct Mol Biol", - "url": "https://pubmed.ncbi.nlm.nih.gov/25775268/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "7556056": { "groups": [ "thermus_thermophilus" @@ -82267,20 +146673,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "17681011": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Many fructosamine 3-kinase homologues in bacteria are ribulosamine/erythrulosamine 3-kinases potentially involved in protein deglycation.", - "pub_date": "2007 Sep", - "source": "FEBS J", - "url": "https://pubmed.ncbi.nlm.nih.gov/17681011/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "1339363": { "groups": [ "thermus_thermophilus" @@ -82379,20 +146771,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "19798051": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Mg(2+)-dependent gating of bacterial MgtE channel underlies Mg(2+) homeostasis.", - "pub_date": "2009 Nov 18", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/19798051/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "1541262": { "groups": [ "thermus_thermophilus" @@ -82547,20 +146925,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "20940705": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Visualizing the transfer-messenger RNA as the ribosome resumes translation.", - "pub_date": "2010 Nov 17", - "source": "EMBO J", - "url": "https://pubmed.ncbi.nlm.nih.gov/20940705/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "15162485": { "groups": [ "thermus_thermophilus" @@ -82659,20 +147023,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "22521690": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Mechanism of foreign DNA selection in a bacterial adaptive immune system.", - "pub_date": "2012 Jun 8", - "source": "Mol Cell", - "url": "https://pubmed.ncbi.nlm.nih.gov/22521690/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "9746356": { "groups": [ "thermus_thermophilus" @@ -82743,20 +147093,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "27934701": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Translational termination without a stop codon.", - "pub_date": "2016 Dec 16", - "source": "Science", - "url": "https://pubmed.ncbi.nlm.nih.gov/27934701/", - "format": "xml", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "7794527": { "groups": [ "thermus_thermophilus" @@ -82953,20 +147289,6 @@ "organisms": [], "n_uniprot_entries": 0 }, - "21562494": { - "groups": [ - "thermus_thermophilus" - ], - "title": "Structure and function of a membrane component SecDF that enhances protein export.", - "pub_date": "2011 May 11", - "source": "Nature", - "url": "https://pubmed.ncbi.nlm.nih.gov/21562494/", - "format": "pdf", - "uniprot_ids": [], - "protein_names": [], - "organisms": [], - "n_uniprot_entries": 0 - }, "9813279": { "groups": [ "thermus_thermophilus"