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- .gitattributes +25 -0
- data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=10/t=0.5_ALL_FIELDS.csv.gz +3 -0
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.gitattributes
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data/clustering/model=dmis-lab__biobert-v1.1/min=5/t=0.8_ALL_FIELDS.csv.gz filter=lfs diff=lfs merge=lfs -text
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data/clustering/model=dmis-lab__biobert-v1.1/min=5/t=0.9_ALL_FIELDS.csv.gz filter=lfs diff=lfs merge=lfs -text
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=10/t=0.8_FIELD_CLUSTER_METRICS.csv
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=10/t=0.9_ALL_FIELDS.csv.gz
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size 1559187
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=10/t=0.9_FIELD_CLUSTER_METRICS.csv
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.5_ALL_FIELDS.csv.gz
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.5_FIELD_CLUSTER_METRICS.csv
ADDED
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.6_ALL_FIELDS.csv.gz
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.6_FIELD_CLUSTER_METRICS.csv
ADDED
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.7_ALL_FIELDS.csv.gz
ADDED
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.7_FIELD_CLUSTER_METRICS.csv
ADDED
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.8_ALL_FIELDS.csv.gz
ADDED
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version https://git-lfs.github.com/spec/v1
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.8_FIELD_CLUSTER_METRICS.csv
ADDED
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.9_ALL_FIELDS.csv.gz
ADDED
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=2/t=0.9_FIELD_CLUSTER_METRICS.csv
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.5_ALL_FIELDS.csv.gz
ADDED
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version https://git-lfs.github.com/spec/v1
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.5_FIELD_CLUSTER_METRICS.csv
ADDED
|
@@ -0,0 +1,14 @@
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|
| 1 |
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field,n_total,n_used,n_clusters,silhouette_cosine,davies_bouldin,min_community_size,threshold
|
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.6_ALL_FIELDS.csv.gz
ADDED
|
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version https://git-lfs.github.com/spec/v1
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.6_FIELD_CLUSTER_METRICS.csv
ADDED
|
@@ -0,0 +1,14 @@
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|
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field,n_total,n_used,n_clusters,silhouette_cosine,davies_bouldin,min_community_size,threshold
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|
data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.7_ALL_FIELDS.csv.gz
ADDED
|
@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.7_FIELD_CLUSTER_METRICS.csv
ADDED
|
@@ -0,0 +1,14 @@
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|
| 1 |
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field,n_total,n_used,n_clusters,silhouette_cosine,davies_bouldin,min_community_size,threshold
|
| 2 |
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desalting_process,3720,3720,1,,,20,0.7
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.8_ALL_FIELDS.csv.gz
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.8_FIELD_CLUSTER_METRICS.csv
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.9_ALL_FIELDS.csv.gz
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size 1559187
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=20/t=0.9_FIELD_CLUSTER_METRICS.csv
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.5_ALL_FIELDS.csv.gz
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.5_FIELD_CLUSTER_METRICS.csv
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.6_ALL_FIELDS.csv.gz
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.6_FIELD_CLUSTER_METRICS.csv
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.7_ALL_FIELDS.csv.gz
ADDED
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version https://git-lfs.github.com/spec/v1
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.7_FIELD_CLUSTER_METRICS.csv
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.8_ALL_FIELDS.csv.gz
ADDED
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.8_FIELD_CLUSTER_METRICS.csv
ADDED
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.9_ALL_FIELDS.csv.gz
ADDED
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version https://git-lfs.github.com/spec/v1
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size 1559187
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=30/t=0.9_FIELD_CLUSTER_METRICS.csv
ADDED
|
@@ -0,0 +1,14 @@
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|
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| 13 |
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.5_ALL_FIELDS.csv.gz
ADDED
|
@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.5_FIELD_CLUSTER_METRICS.csv
ADDED
|
@@ -0,0 +1,14 @@
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|
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|
|
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|
| 1 |
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field,n_total,n_used,n_clusters,silhouette_cosine,davies_bouldin,min_community_size,threshold
|
| 2 |
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desalting_process,3720,3720,1,,,5,0.5
|
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|
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|
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|
| 7 |
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induction_temperature,3656,3656,1,,,5,0.5
|
| 8 |
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| 10 |
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|
| 13 |
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source_key,8021,8021,1,,,5,0.5
|
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strain,2444,2444,1,,,5,0.5
|
data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.6_ALL_FIELDS.csv.gz
ADDED
|
@@ -0,0 +1,3 @@
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| 1 |
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version https://git-lfs.github.com/spec/v1
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size 1559184
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data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.6_FIELD_CLUSTER_METRICS.csv
ADDED
|
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|
| 1 |
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field,n_total,n_used,n_clusters,silhouette_cosine,davies_bouldin,min_community_size,threshold
|
| 2 |
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desalting_process,3720,3720,1,,,5,0.6
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plasmid,5480,5480,1,,,5,0.6
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+
source_key,8021,8021,1,,,5,0.6
|
| 14 |
+
strain,2444,2444,1,,,5,0.6
|
data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.7_ALL_FIELDS.csv.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:6f2deaf400ed7509f280ac9f7fbfe6814174f80a0d3328309305b17d717acbe7
|
| 3 |
+
size 1559184
|
data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.7_FIELD_CLUSTER_METRICS.csv
ADDED
|
@@ -0,0 +1,14 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
field,n_total,n_used,n_clusters,silhouette_cosine,davies_bouldin,min_community_size,threshold
|
| 2 |
+
desalting_process,3720,3720,1,,,5,0.7
|
| 3 |
+
elution_buffer,3530,3530,1,,,5,0.7
|
| 4 |
+
enzyme_name,7975,7975,1,,,5,0.7
|
| 5 |
+
expression_strain,5677,5677,1,,,5,0.7
|
| 6 |
+
inducer,7889,7889,1,,,5,0.7
|
| 7 |
+
induction_temperature,3656,3656,1,,,5,0.7
|
| 8 |
+
lysis_buffer,3714,3714,1,,,5,0.7
|
| 9 |
+
medium_name,4806,4806,1,,,5,0.7
|
| 10 |
+
molecular_weight,295,295,1,,,5,0.7
|
| 11 |
+
organism_source,6292,6292,1,,,5,0.7
|
| 12 |
+
plasmid,5480,5480,1,,,5,0.7
|
| 13 |
+
source_key,8021,8021,1,,,5,0.7
|
| 14 |
+
strain,2444,2444,1,,,5,0.7
|
data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.8_ALL_FIELDS.csv.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:9188d1c4cb399bf4dd4115d8e49b0c3b8bdb8487eee5ac9eb75d1e79cd17f11c
|
| 3 |
+
size 1559184
|
data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.8_FIELD_CLUSTER_METRICS.csv
ADDED
|
@@ -0,0 +1,14 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
field,n_total,n_used,n_clusters,silhouette_cosine,davies_bouldin,min_community_size,threshold
|
| 2 |
+
desalting_process,3720,3720,1,,,5,0.8
|
| 3 |
+
elution_buffer,3530,3530,1,,,5,0.8
|
| 4 |
+
enzyme_name,7975,7975,1,,,5,0.8
|
| 5 |
+
expression_strain,5677,5677,1,,,5,0.8
|
| 6 |
+
inducer,7889,7889,1,,,5,0.8
|
| 7 |
+
induction_temperature,3656,3656,1,,,5,0.8
|
| 8 |
+
lysis_buffer,3714,3714,1,,,5,0.8
|
| 9 |
+
medium_name,4806,4806,1,,,5,0.8
|
| 10 |
+
molecular_weight,295,295,1,,,5,0.8
|
| 11 |
+
organism_source,6292,6292,1,,,5,0.8
|
| 12 |
+
plasmid,5480,5480,1,,,5,0.8
|
| 13 |
+
source_key,8021,8021,1,,,5,0.8
|
| 14 |
+
strain,2444,2444,1,,,5,0.8
|
data/clustering/model=microsoft__BiomedNLP-BiomedBERT-base-uncased-abstract-fulltext/min=5/t=0.9_ALL_FIELDS.csv.gz
ADDED
|
@@ -0,0 +1,3 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
version https://git-lfs.github.com/spec/v1
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| 2 |
+
oid sha256:76247df7e62975e5497e06664aab5edc769c0b5a42e2f83b22bababe69bcb11d
|
| 3 |
+
size 1559187
|