chemgraph-loop / precomputed /formaldehyde__thermo.json
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add formaldehyde + H2O2 IR/thermo (validated)
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{
"ok": true,
"cached": true,
"query": "Compute the thermochemistry (enthalpy, entropy, Gibbs free energy) of formaldehyde using the TBLite calculator at 298.15 K.",
"molecule": "formaldehyde",
"formula": "CH2O",
"smiles": "C=O",
"resolved": "formaldehyde",
"calculator": "TBLite",
"task": "thermo",
"intent": {
"task_type": "gibbs_free_energy",
"required_output": "thermochemistry.gibbs_free_energy",
"calculator": "TBLite",
"target_molecules": [
"formaldehyde"
]
},
"structure": {
"atoms": [
{
"el": "C",
"x": -0.0333,
"y": 0.0058,
"z": 0.0002
},
{
"el": "O",
"x": 1.1679,
"y": -0.2043,
"z": -0.0078
},
{
"el": "H",
"x": -0.7291,
"y": -0.8258,
"z": 0.0108
},
{
"el": "H",
"x": -0.4055,
"y": 1.0243,
"z": -0.0032
}
],
"natoms": 4
},
"steps": [
{
"tool": "molecule_name_to_smiles",
"status": "success",
"summary": "formaldehyde → SMILES C=O · CH2O (PubChem)",
"detail": {
"name": "formaldehyde",
"resolved": "formaldehyde",
"smiles": "C=O",
"formula": "CH2O",
"cid": 712,
"source": "PubChem"
}
},
{
"tool": "smiles_to_coordinate_file",
"status": "success",
"summary": "built 3D structure · 4 atoms",
"detail": {
"smiles": "C=O",
"natoms": 4
}
},
{
"tool": "run_ase",
"status": "success",
"summary": "thermochemistry computed",
"detail": {
"driver": "thermo",
"calculator": "TBLite",
"method": "GFN2-xTB"
}
}
],
"result": {
"kind": "thermo",
"thermo": {
"enthalpy": -194.4600186427589,
"entropy": 0.002264310627377974,
"gibbs": -195.13512285631165,
"unit": "eV"
}
},
"verified": true
}