modif tests with dummy csv

README.md

@@ -44,7 +44,7 @@ git clone https://github.com/romybeaute/MOSAICapp.git
 cd MOSAICapp
 
 # Create virtual environment (recommended)
-python -m venv .venv
+python3 -m venv .venv
 source .venv/bin/activate
 
 # Install dependencies and the package
@@ -111,6 +111,12 @@ See [CONTRIBUTING.md](CONTRIBUTING.md) for guidelines on reporting bugs, suggest
 
 ## Tests
 
+**Run everything:**
+```bash
+pytest tests/ -v
+```
+
+**Run only fast tests:**
 ```bash
 pytest tests/test_core_functions.py -v
 ```

tests/conftest.py

@@ -1,73 +1,62 @@
-"""Pytest fixtures for MOSAIC tests."""
+"""Pytest fixtures for MOSAIC tests using local dummy dataset."""
 
 import os
-import tempfile
-
-import numpy as np
-import pandas as pd
 import pytest
-
+import pandas as pd
+import numpy as np
+from pathlib import Path
 
 @pytest.fixture
-def sample_texts():
-    """Short phenomenological reports for testing."""
-    return [
-        "I saw vivid geometric patterns and colors.",
-        "There was a feeling of floating outside my body.",
-        "Time seemed to slow down completely.",
-        "I experienced a deep sense of peace and calm.",
-        "The music created visual patterns in my mind.",
-    ]
-
+def sample_csv():
+    """Returns the path to the dummy_dataset.csv file located in the same directory."""
+    # Get the directory where this conftest.py file resides
+    current_dir = Path(__file__).parent
+    file_path = current_dir / "dummy_dataset.csv"
+    
+    if not file_path.exists():
+        pytest.fail(f"Test data file not found at: {file_path}")
+        
+    return str(file_path)
 
 @pytest.fixture
-def sample_dataframe(sample_texts):
-    """DataFrame with text column and metadata."""
-    return pd.DataFrame({
-        "id": range(1, len(sample_texts) + 1),
-        "text": sample_texts,
-        "condition": ["HS", "HS", "DL", "DL", "HS"],
-    })
-
+def sample_dataframe(sample_csv):
+    """Loads the CSV into a DataFrame and normalizes column names."""
+    df = pd.read_csv(sample_csv)
+    
+    # Normalize text column name for tests (handle 'report' vs 'text')
+    if 'text' not in df.columns:
+        if 'report' in df.columns:
+            df = df.rename(columns={'report': 'text'})
+        else:
+            # Fallback: assume first column is text if neither exists
+            df = df.rename(columns={df.columns[0]: 'text'})
+            
+    return df
 
 @pytest.fixture
-def sample_csv(sample_dataframe):
-    """Temporary CSV file with sample data."""
-    with tempfile.NamedTemporaryFile(mode="w", suffix=".csv", delete=False) as f:
-        sample_dataframe.to_csv(f, index=False)
-        path = f.name
-    yield path
-    if os.path.exists(path):
-        os.unlink(path)
-
+def sample_texts(sample_dataframe):
+    """Returns the list of text reports from the dataframe."""
+    return sample_dataframe['text'].tolist()
 
 @pytest.fixture
-def sample_embeddings():
-    """Random embeddings matching sample_texts length."""
+def sample_embeddings(sample_texts):
+    """Generates random embeddings matching the exact length of the CSV data."""
     np.random.seed(42)
-    return np.random.randn(5, 384).astype(np.float32)
-
+    # Generate (n_samples, 384) matrix
+    return np.random.randn(len(sample_texts), 384).astype(np.float32)
 
 @pytest.fixture
-def larger_corpus():
-    """30 documents for topic modeling tests (UMAP needs >15 samples)."""
-    base = [
-        "I saw a bright light.",
-        "The light was blinding and white.",
-        "I felt a presence nearby.",
-        "The presence was comforting.",
-        "Patterns emerged in the visual field.",
-        "Geometric patterns were everywhere.",
-    ]
-    return base * 5
-
+def larger_corpus(sample_texts):
+    """
+    Alias for sample_texts. 
+    Since the dummy dataset is sufficiently large, we reuse it.
+    """
+    return sample_texts
 
 @pytest.fixture
-def larger_embeddings(larger_corpus):
-    """Embeddings for the larger corpus."""
-    np.random.seed(42)
-    return np.random.randn(len(larger_corpus), 384).astype(np.float32)
-
+def larger_embeddings(sample_embeddings):
+    """Alias for sample_embeddings matching the larger corpus."""
+    return sample_embeddings
 
 @pytest.fixture
 def topic_config():

tests/dummy_dataset.csv

@@ -0,0 +1,100 @@
+report
+Geometric patterns started rotating behind my eyelids.
+The colors in the room became incredibly vivid; they started breathing.
+I saw a bright white light. It seemed to emanate from everywhere.
+Fractal imagery appeared. It shifted slowly from green to purple.
+The edges of objects became fuzzy. Everything looked indistinct.
+Visual acuity increased significantly. I could see every pore on my hand.
+I perceived trails of light following moving objects.
+The room appeared to stretch. It warped like a funhouse mirror.
+Complex architectural structures appeared in my peripheral vision.
+Everything looked two-dimensional. It was like a flat painting.
+My body felt incredibly heavy. It felt as if I were sinking into the floor.
+I lost all sensation in my hands and feet.
+A warm tingling sensation started at the base of my spine. It moved up to my neck.
+I felt a disconnect between my mind and my physical form.
+My breathing became very rhythmic. It was deep and without my control.
+I felt physically larger than the room I was sitting in.
+A sensation of floating weightlessness took over.
+I felt a rhythmic pulsing in my chest. It matched the beat of the music.
+My limbs felt elongated. They felt rubbery and strange.
+There was a distinct pressure in the center of my forehead.
+I was overcome by a profound sense of universal love.
+A sudden wave of anxiety washed over me. However, it passed quickly.
+I felt completely at peace with past conflicts.
+There was an intense feeling of gratitude for simply existing.
+I felt deeply connected to the people around me.
+Tears of joy started streaming down my face. I could not control them.
+I felt a sense of awe. I felt insignificant in the face of the universe.
+Old memories surfaced. They brought a mix of nostalgia and sadness.
+I felt incredibly safe. I felt held by the environment.
+A burst of euphoria made me want to laugh out loud.
+Time seemed to stop completely. A minute felt like an hour.
+My sense of self dissolved. I became part of the music.
+Thoughts were racing faster than I could process them.
+My mind was completely silent. It was a rare state of no-thought.
+I understood the concept of infinity intuitively.
+The boundary between myself and the external world vanished.
+I had a sudden insight into a problem. I had been struggling with it for years.
+Language felt clumsy. It was inadequate to describe the experience.
+I forgot who I was for a brief moment.
+The past and future seemed to merge. They became a single present moment.
+I saw a bright light. Then, I felt a deep sense of peace.
+My hands felt huge. In contrast, the room looked tiny.
+The music became visible as colors. At the same time, I felt my body floating.
+I felt a sharp pain in my stomach. This was followed by a release of tension.
+The walls were breathing. I felt connected to the house.
+Time slowed down. I could see the air moving.
+I felt a vibration in my teeth. I also saw blue flashes.
+My ego dissolved. I was just pure awareness watching the room.
+I remembered my childhood. This made me feel a wave of grief.
+The floor patterns were moving. My legs felt like jelly.
+I felt like I was underwater. The sounds were muffled.
+Bright geometric shapes appeared. I felt very cold.
+I laughed uncontrollably. The room spun around me.
+I felt a presence in the room. I saw a shadow move.
+My thoughts were looping. I couldn't speak.
+The light was blinding. I felt a sense of holiness.
+I felt tiny like an ant. The world was massive.
+Colors tasted sweet. Sounds had textures.
+I felt a burning sensation in my chest. It turned into love.
+The world looked digital. It was like a computer simulation.
+I saw my own face in the mirror. I didn't recognize it.
+A deep hum vibrated through my bones. The light turned red.
+I felt like I was spinning very fast. Yet, I was standing still.
+The concept of money seemed absurd. I started laughing.
+I felt a deep empathy for a tree outside the window.
+My hands looked alien. I saw trails when I moved them.
+I felt a knot in my throat. It released into a scream.
+The silence was deafening. The darkness was full of light.
+I felt like I was being pulled upwards. It was like a giant magnet.
+My skin felt hard. It felt like it was made of stone.
+I saw faces in the clouds. I felt they were watching me.
+I felt a wave of heat. Then, I felt a wave of cold.
+The music sounded internal. It was coming from inside my head.
+I felt a deep sense of forgiveness for myself.
+The room folded in on itself. I was in a void.
+I felt like I was made of light and sound.
+I saw a tunnel of light. I felt no fear.
+My thoughts were clear. They were sharp like crystal.
+I felt the rotation of the earth beneath me.
+The air felt thick like syrup. It was harder to breathe.
+I saw sparks of light. They appeared when I closed my eyes.
+I felt a deep sadness for the state of the world.
+My body was vibrating. It was at a high frequency.
+I saw the structure of the universe in a flower.
+I felt like I had lived this moment before.
+The colors were hyper-real. They were more real than real life.
+I felt a heavy weight on my chest. I couldn't move.
+I saw a grid overlaying everything in the room.
+I felt a separation between my observer self and my thinking self.
+My voice sounded strange. It sounded distant to my ears.
+I felt a rush of energy up my spine. I saw white.
+The objects in the room seemed to have personalities.
+I felt like I was melting. I was melting into the chair.
+I saw a vision of my future. I felt calm.
+The world turned into a cartoon for a second.
+I felt a deep connection to my ancestors.
+I saw a kaleidoscope of colors. I felt dizzy.
+My heart was beating so fast. I thought it would explode.
+I felt a sense of absolute truth. I felt clarity.