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Update app.py
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app.py
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import numpy as np
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import
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from
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from
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from sklearn.covariance import EllipticEnvelope
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from sklearn.neighbors import LocalOutlierFactor
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from sklearn.linear_model import SGDOneClassSVM
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from sklearn.pipeline import make_pipeline
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from sklearn.kernel_approximation import Nystroem
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from sklearn import
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def train_models(input_data,
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"""Train anomaly detection models and plot results."""
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n_outliers = int(outliers_fraction * n_samples)
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n_inliers = n_samples - n_outliers
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blobs_params = dict(random_state=0, n_samples=n_inliers, n_features=2)
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NAME_CLF_MAPPING = {
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"One-Class SVM (SGD)": make_pipeline(
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Nystroem(gamma=0.1, random_state=42, n_components=150),
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SGDOneClassSVM(
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nu=outliers_fraction,
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@@ -35,76 +51,110 @@ def train_models(input_data, outliers_fraction, n_samples, clf_name):
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"Isolation Forest": IsolationForest(contamination=outliers_fraction, random_state=42),
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"Local Outlier Factor": LocalOutlierFactor(n_neighbors=35, contamination=outliers_fraction),
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}
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DATA_MAPPING = {
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}
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xx, yy = np.meshgrid(np.linspace(-7, 7, 150), np.linspace(-7, 7, 150))
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clf = NAME_CLF_MAPPING[clf_name]
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plt.figure(figsize=(
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X = DATA_MAPPING[input_data]
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rng = np.random.RandomState(42)
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X = np.concatenate([X, rng.uniform(low=-6, high=6, size=(n_outliers, 2))], axis=0)
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# Convert X to DataFrame if using IsolationForest to ensure feature names
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if clf_name == "Isolation Forest":
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X = pd.DataFrame(X, columns=["Feature1", "Feature2"])
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t0 = time.time()
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clf.fit(X)
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t1 = time.time()
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if clf_name == "Local Outlier Factor":
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y_pred = clf.fit_predict(X)
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else:
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y_pred = clf.fit(X).predict(X)
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Z = clf.predict(np.c_[xx.ravel(), yy.ravel()])
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Z = Z.reshape(xx.shape)
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plt.contour(xx, yy, Z, levels=[0], linewidths=
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colors = np.array(["#377eb8", "#ff7f00"])
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plt.scatter(X
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plt.xlim(-7, 7)
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plt.ylim(-7, 7)
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plt.xticks(())
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plt.yticks(())
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plt.
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return plt
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with gr.Blocks() as demo:
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gr.Markdown("
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input_models = [
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]
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input_data = gr.Radio(
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choices=["Central Blob", "Two Blobs", "Blob with Noise", "Moons", "Noise"],
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value="Moons"
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label="Dataset Type"
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)
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n_samples = gr.Slider(
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minimum=100, maximum=500, step=25, value=300, label="Number of Samples"
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)
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outliers_fraction = gr.Slider(
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minimum=0.1, maximum=0.9, step=0.1, value=0.2, label="Outlier Fraction"
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)
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plot = gr.Plot(label=
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fn = partial(train_models, clf_name=
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input_data.change(fn=fn, inputs=[input_data, outliers_fraction, n_samples], outputs=plot)
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n_samples.change(fn=fn, inputs=[input_data, outliers_fraction, n_samples], outputs=plot)
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outliers_fraction.change(fn=fn, inputs=[input_data, outliers_fraction, n_samples], outputs=plot)
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demo.launch()
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import numpy as np
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import matplotlib.pyplot as plt
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from threading import Thread
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from matplotlib.colors import ListedColormap
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from sklearn.datasets import make_moons, make_circles, make_classification
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from sklearn.datasets import make_blobs, make_circles, make_moons
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import gradio as gr
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import math
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from functools import partial
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import time
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import matplotlib
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from sklearn import svm
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from sklearn.datasets import make_moons, make_blobs
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from sklearn.covariance import EllipticEnvelope
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from sklearn.ensemble import IsolationForest
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from sklearn.neighbors import LocalOutlierFactor
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from sklearn.linear_model import SGDOneClassSVM
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from sklearn.kernel_approximation import Nystroem
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from sklearn.pipeline import make_pipeline
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def get_groundtruth_model(X, labels):
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# dummy model to show true label distribution
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class Dummy:
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def __init__(self, y):
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self.labels_ = labels
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return Dummy(labels)
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#### PLOT
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FIGSIZE = 10,10
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figure = plt.figure(figsize=(25, 10))
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def train_models(input_data, outliers_fraction, n_samples, clf_name):
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n_outliers = int(outliers_fraction * n_samples)
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n_inliers = n_samples - n_outliers
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blobs_params = dict(random_state=0, n_samples=n_inliers, n_features=2)
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NAME_CLF_MAPPING = {"Robust covariance": EllipticEnvelope(contamination=outliers_fraction),
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"One-Class SVM": svm.OneClassSVM(nu=outliers_fraction, kernel="rbf", gamma=0.1),
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"One-Class SVM (SGD)":make_pipeline(
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Nystroem(gamma=0.1, random_state=42, n_components=150),
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SGDOneClassSVM(
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nu=outliers_fraction,
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),
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"Isolation Forest": IsolationForest(contamination=outliers_fraction, random_state=42),
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"Local Outlier Factor": LocalOutlierFactor(n_neighbors=35, contamination=outliers_fraction),
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}
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DATA_MAPPING = {
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"Central Blob":make_blobs(centers=[[0, 0], [0, 0]], cluster_std=0.5, **blobs_params)[0],
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"Two Blobs": make_blobs(centers=[[2, 2], [-2, -2]], cluster_std=[0.5, 0.5], **blobs_params)[0],
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"Blob with Noise": make_blobs(centers=[[2, 2], [-2, -2]], cluster_std=[1.5, 0.3], **blobs_params)[0],
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"Moons": 4.0
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* (
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make_moons(n_samples=n_samples, noise=0.05, random_state=0)[0]
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- np.array([0.5, 0.25])
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),
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"Noise": 14.0 * (np.random.RandomState(42).rand(n_samples, 2) - 0.5),
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}
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DATASETS = [
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make_blobs(centers=[[0, 0], [0, 0]], cluster_std=0.5, **blobs_params)[0],
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make_blobs(centers=[[2, 2], [-2, -2]], cluster_std=[0.5, 0.5], **blobs_params)[0],
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make_blobs(centers=[[2, 2], [-2, -2]], cluster_std=[1.5, 0.3], **blobs_params)[0],
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4.0
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* (
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make_moons(n_samples=n_samples, noise=0.05, random_state=0)[0]
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- np.array([0.5, 0.25])
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),
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14.0 * (np.random.RandomState(42).rand(n_samples, 2) - 0.5),
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]
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xx, yy = np.meshgrid(np.linspace(-7, 7, 150), np.linspace(-7, 7, 150))
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clf = NAME_CLF_MAPPING[clf_name]
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plt.figure(figsize=(len(NAME_CLF_MAPPING) * 2 + 4, 12.5))
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plot_num = 1
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rng = np.random.RandomState(42)
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X = DATA_MAPPING[input_data]
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X = np.concatenate([X, rng.uniform(low=-6, high=6, size=(n_outliers, 2))], axis=0)
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t0 = time.time()
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clf.fit(X)
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t1 = time.time()
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# fit the data and tag outliers
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if clf_name == "Local Outlier Factor":
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y_pred = clf.fit_predict(X)
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else:
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y_pred = clf.fit(X).predict(X)
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# plot the levels lines and the points
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if clf_name != "Local Outlier Factor":
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Z = clf.predict(np.c_[xx.ravel(), yy.ravel()])
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Z = Z.reshape(xx.shape)
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plt.contour(xx, yy, Z, levels=[0], linewidths=10, colors="black")
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colors = np.array(["#377eb8", "#ff7f00"])
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plt.scatter(X[:, 0], X[:, 1], s=100, color=colors[(y_pred + 1) // 2])
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plt.xlim(-7, 7)
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plt.ylim(-7, 7)
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plt.xticks(())
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plt.yticks(())
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plt.text(
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0.99,
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0.01,
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("%.2fs" % (t1 - t0)).lstrip("0"),
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transform=plt.gca().transAxes,
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size=60,
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horizontalalignment="right",
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)
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plot_num += 1
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return plt
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description = "Learn how different anomaly detection algorithms perform in different datasets."
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def iter_grid(n_rows, n_cols):
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# create a grid using gradio Block
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for _ in range(n_rows):
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with gr.Row():
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for _ in range(n_cols):
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with gr.Column():
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yield
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title = "🕵️♀️ compare anomaly detection algorithms 🕵️♂️"
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with gr.Blocks() as demo:
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gr.Markdown(f"## {title}")
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gr.Markdown(description)
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input_models = ["Robust covariance","One-Class SVM","One-Class SVM (SGD)","Isolation Forest",
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"Local Outlier Factor"]
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input_data = gr.Radio(
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choices=["Central Blob", "Two Blobs", "Blob with Noise", "Moons", "Noise"],
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value="Moons"
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)
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n_samples = gr.Slider(minimum=100, maximum=500, step=25, label="Number of Samples")
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outliers_fraction = gr.Slider(minimum=0.1, maximum=0.9, step=0.1, label="Fraction of Outliers")
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counter = 0
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for _ in iter_grid(5, 5):
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if counter >= len(input_models):
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break
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input_model = input_models[counter]
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plot = gr.Plot(label=input_model)
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fn = partial(train_models, clf_name=input_model)
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input_data.change(fn=fn, inputs=[input_data, outliers_fraction, n_samples], outputs=plot)
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n_samples.change(fn=fn, inputs=[input_data, outliers_fraction, n_samples], outputs=plot)
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outliers_fraction.change(fn=fn, inputs=[input_data, outliers_fraction, n_samples], outputs=plot)
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counter += 1
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demo.launch(enable_queue=True, debug=True)
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