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Update app.py
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app.py
CHANGED
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@@ -8,45 +8,34 @@ import japanize_matplotlib
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class DataProcessor:
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def __init__(self,
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self.bodypart_names = bodypart_names.split(',')
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self.x_max = x_max
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self.y_max = y_max
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self.output_folder = 'output_plots'
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def process_csv(self, file_path):
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df = pd.read_csv(file_path, header=[1, 2])
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df_likelihood = self.extract_likelihood(df)
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df = self.remove_first_column_and_likelihood(df)
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df
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return df, df_likelihood
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def remove_first_column_and_likelihood(self, df):
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df = df.drop(df.columns[0], axis=1)
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df = df[df.columns.drop(list(df.filter(regex='likelihood')))]
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return df
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def rename_bodyparts(self, df):
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current_names = df.columns.get_level_values(0).unique()
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if len(self.bodypart_names) != len(current_names):
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raise ValueError(
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"The length of bodypart_names must be equal to the number of bodyparts.")
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mapping = dict(zip(current_names, self.bodypart_names))
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new_columns = [(mapping[col[0]], col[1]) if col[0]
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in mapping else col for col in df.columns]
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df.columns = pd.MultiIndex.from_tuples(new_columns)
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return df
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def extract_likelihood(self, df):
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# likelihood列のみを抽出する
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df = df[df.columns[df.columns.get_level_values(1) == 'likelihood']]
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df.drop(df.columns[0], axis=1)
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current_names = df.columns.get_level_values(0).unique()
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mapping = dict(zip(current_names, self.bodypart_names))
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new_columns = [(mapping[col[0]], col[1]) if col[0]
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in mapping else col for col in df.columns]
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df.columns = pd.MultiIndex.from_tuples(new_columns)
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return df
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def plot_scatter(self, df):
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@@ -172,16 +161,12 @@ class DataProcessor:
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image_paths.append(f'{self.output_folder}/likelihood_plot.png')
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return image_paths
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# 以下のGradioInterfaceクラスとメイン実行部分は変更なし
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class GradioInterface:
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def __init__(self):
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self.interface = gr.Interface(
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fn=self.process_and_plot,
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inputs=[
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gr.File(label="CSVファイルをドラッグ&ドロップ"),
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gr.Textbox(label="付属肢の名前(カンマ区切り)",
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value="指節1, 指節2, 指節3, 指節4, 指節5, 指節6, 指節7, 指節8, 指節9,指節10, 指節11, 指節12, 指節13, 指節14, 触角(左), 触角(右), 頭部, 腹尾節"),
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gr.Number(label="X軸の最大値", value=1920),
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gr.Number(label="Y軸の最大値", value=1080),
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gr.CheckboxGroup(
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)
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],
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outputs=[
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gr.Gallery(label="
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gr.File(label="ZIPダウンロード")
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],
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title="DeepLabCutグラフ出力ツール",
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description="CSV
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)
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def process_and_plot(self, file,
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processor = DataProcessor(
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df, df_likelihood = processor.process_csv(file.name)
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all_image_paths = []
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if "散布図" in graph_choices:
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if "尤度グラフ" in graph_choices:
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all_image_paths += processor.plot_likelihood(df_likelihood)
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def launch(self):
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self.interface.launch()
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class DataProcessor:
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def __init__(self, x_max, y_max):
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self.x_max = x_max
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self.y_max = y_max
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self.output_folder = 'output_plots'
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self.bodypart_names = None # 初期化時にはNoneに設定
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def process_csv(self, file_path):
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df = pd.read_csv(file_path, header=[1, 2])
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# CSVから自動的に付属肢名を抽出
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self.bodypart_names = df.columns.get_level_values(0).unique().tolist()
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# 最初の列(通常はscorerなど)を除外
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if len(self.bodypart_names) > 0:
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self.bodypart_names = self.bodypart_names[1:]
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df_likelihood = self.extract_likelihood(df)
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df = self.remove_first_column_and_likelihood(df)
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return df, df_likelihood, self.bodypart_names # 抽出した付属肢名も返す
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def remove_first_column_and_likelihood(self, df):
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df = df.drop(df.columns[0], axis=1)
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df = df[df.columns.drop(list(df.filter(regex='likelihood')))]
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return df
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def extract_likelihood(self, df):
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# likelihood列のみを抽出する
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df = df[df.columns[df.columns.get_level_values(1) == 'likelihood']]
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df.drop(df.columns[0], axis=1)
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return df
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def plot_scatter(self, df):
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image_paths.append(f'{self.output_folder}/likelihood_plot.png')
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return image_paths
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class GradioInterface:
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def __init__(self):
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self.interface = gr.Interface(
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fn=self.process_and_plot,
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inputs=[
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gr.File(label="CSVファイルをドラッグ&ドロップ"),
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gr.Number(label="X軸の最大値", value=1920),
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gr.Number(label="Y軸の最大値", value=1080),
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gr.CheckboxGroup(
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)
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],
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outputs=[
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gr.Gallery(label="グラフ"),
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gr.File(label="ZIPダウンロード"),
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gr.Textbox(label="検出された付属肢") # 検出された付属肢を表示するための出力を追加
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],
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title="DeepLabCutグラフ出力ツール",
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description="CSVファイルからグラフを作成します。付属肢はCSVファイルから自動的に抽出されます。"
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)
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def process_and_plot(self, file, x_max, y_max, graph_choices):
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processor = DataProcessor(x_max, y_max)
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df, df_likelihood, bodypart_names = processor.process_csv(file.name)
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all_image_paths = []
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if "散布図" in graph_choices:
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if "尤度グラフ" in graph_choices:
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all_image_paths += processor.plot_likelihood(df_likelihood)
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# 付属肢の名前を表示用に結合
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bodyparts_text = ", ".join(bodypart_names)
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shutil.make_archive(processor.output_folder, 'zip', processor.output_folder)
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return all_image_paths, processor.output_folder + '.zip', bodyparts_text
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def launch(self):
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self.interface.launch()
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