splicing-predictor / webapp /data /datasets_data.json
sachin1801
pyshiny visualizations added on results page
2fc42e1
{
"ES7": {
"basal_shift": 0,
"pre_flanking_sequence": "CATCCAGGTT",
"post_flanking_sequence": "CAGGTCTGAC",
"number_of_datapoints": 47962,
"exon_length": 70,
"sequence_length": 90,
"r_squared": 0.9069368881066787
},
"WT1_exon_5": {
"basal_shift": -5.8,
"pre_flanking_sequence": "TTTCTAG",
"post_flanking_sequence": "GTGAGTG",
"number_of_datapoints": 5560,
"exon_length": 51,
"sequence_length": 65,
"r_squared": 0.7756628909179489
},
"FAS_exon_6": {
"basal_shift": 3.6,
"pre_flanking_sequence": "",
"post_flanking_sequence": "",
"number_of_datapoints": 794,
"exon_length": 63,
"sequence_length": 63,
"r_squared": 0.9020387508616958
},
"SMN2_exon_7": {
"basal_shift": -0.2,
"pre_flanking_sequence": "AACTTCCTTTATTTTCCTTACAG",
"post_flanking_sequence": "GTAAGTCTGCC",
"number_of_datapoints": 56,
"exon_length": 54,
"sequence_length": 88,
"r_squared": 0.6485961639623267
},
"BRCA2_exon_7": {
"basal_shift": 3.8,
"pre_flanking_sequence": "TTTCTTTCCTCCCAG",
"post_flanking_sequence": "GTAATAATAGCAAAT",
"number_of_datapoints": 31,
"exon_length": 115,
"sequence_length": 145,
"r_squared": 0.6915058670445455
},
"CFTR_exon_13": {
"basal_shift": 4.8,
"pre_flanking_sequence": "CCATTTTCTTTTTAG",
"post_flanking_sequence": "GTATGTTCTTTGAAT",
"number_of_datapoints": 22,
"exon_length": 87,
"sequence_length": 117,
"r_squared": 0.8591799198918351
}
}