Create model.py
Browse files
model.py
ADDED
|
@@ -0,0 +1,38 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
import torch
|
| 2 |
+
from transformers import AutoTokenizer, AutoModelForCausalLM
|
| 3 |
+
from torchvision import transforms
|
| 4 |
+
from vit_encoder import ViTEncoder
|
| 5 |
+
from PIL import Image
|
| 6 |
+
|
| 7 |
+
class ChestGPTDemo:
|
| 8 |
+
def __init__(self, device="cpu"):
|
| 9 |
+
self.device = device
|
| 10 |
+
self.vit = ViTEncoder().to(device).eval()
|
| 11 |
+
self.tokenizer = AutoTokenizer.from_pretrained("tiiuae/falcon-7b-instruct")
|
| 12 |
+
self.lm = AutoModelForCausalLM.from_pretrained(
|
| 13 |
+
"tiiuae/falcon-7b-instruct",
|
| 14 |
+
device_map="auto",
|
| 15 |
+
torch_dtype=torch.float16 if torch.cuda.is_available() else torch.float32
|
| 16 |
+
)
|
| 17 |
+
self.prompt = (
|
| 18 |
+
"[radiology] Please describe this chest X-ray in detail. "
|
| 19 |
+
"List global diseases and any local findings with locations."
|
| 20 |
+
)
|
| 21 |
+
|
| 22 |
+
def process_image(self, img: Image.Image):
|
| 23 |
+
transform = transforms.Compose([
|
| 24 |
+
transforms.Resize((224, 224)),
|
| 25 |
+
transforms.ToTensor()
|
| 26 |
+
])
|
| 27 |
+
tensor = transform(img.convert("RGB")).unsqueeze(0).to(self.device)
|
| 28 |
+
return tensor
|
| 29 |
+
|
| 30 |
+
def predict(self, img: Image.Image):
|
| 31 |
+
img_tensor = self.process_image(img)
|
| 32 |
+
with torch.no_grad():
|
| 33 |
+
vit_feat = self.vit(img_tensor)
|
| 34 |
+
# Shorten token list for demo
|
| 35 |
+
prompt = self.prompt + "\n[image_features]: " + ", ".join([f"{x:.3f}" for x in vit_feat[0][:10]])
|
| 36 |
+
input_ids = self.tokenizer(prompt, return_tensors="pt").input_ids.to(self.device)
|
| 37 |
+
out = self.lm.generate(input_ids, max_new_tokens=100)
|
| 38 |
+
return self.tokenizer.decode(out[0], skip_special_tokens=True)
|