Update app.py
Browse files
app.py
CHANGED
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@@ -44,15 +44,14 @@ def predict_stability(model_choice, organism_choice, pdb_file=None, sequence=Non
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cell_line = "NIH3T3"
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# If sequence is provided directly
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# return "No valid input provided."
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def get_foldseek_seq(pdb_path):
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@@ -73,7 +72,7 @@ def predict(cfg, sequence):
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cfg.max_length += 1
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seed_everything(cfg.seed)
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df = pd.DataFrame({cfg.sequence_col: [sequence]})
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tokenizer = AutoTokenizer.from_pretrained(
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else:
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cell_line = "NIH3T3"
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# If sequence is provided directly
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if sequence:
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cfg.model = f"sagawa/PLTNUM-{model_choice}-{cell_line}"
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cfg.architecture = model_choice
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cfg.model_path = f"sagawa/PLTNUM-{model_choice}-{cell_line}"
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output = predict(cfg, sequence)
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return f"Predicted Stability using {model_choice} for {organism_choice}: Example Output with sequence {output}..."
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else:
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return "No valid input provided."
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def get_foldseek_seq(pdb_path):
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cfg.max_length += 1
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seed_everything(cfg.seed)
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error
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df = pd.DataFrame({cfg.sequence_col: [sequence]})
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tokenizer = AutoTokenizer.from_pretrained(
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